Guide to the Human Genome
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Name: OR4C6 Sequence: fasta or formatted (309aa) NCBI GI: 52317237
Description:

olfactory receptor, family 4, subfamily C, member 6

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         17           1
 C cysteine            3.6         11           2
 D aspartate           2.6          8           1
 E glutamate           2.6          8           1
 F phenylalanine       6.1         19           2
 G glycine             4.5         14           2
 H histidine           2.6          8           1
 I isoleucine          8.7         27           2
 K lysine              4.5         14           2
 L leucine            14.6         45           2
 M methionine          5.5         17           2
 N asparagine          2.9          9           2
 P proline             3.6         11           1
 Q glutamine           1.9          6           1
 R arginine            1.9          6           1
 S serine              7.4         23           2
 T threonine           7.1         22           2
 V valine              9.7         30           3
 W tryptophan          1.3          4           1
 Y tyrosine            3.2         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 4, subfamily C, member 6 ... 
OR4A15                0.627   olfactory receptor, family 4, subfamily A, member 15...
OR4C13                0.619   olfactory receptor, family 4, subfamily C, member 13...
OR4C15                0.610   olfactory receptor, family 4, subfamily C, member 15...
OR4C46                0.608   olfactory receptor, family 4, subfamily C, member 46...
OR4C12                0.607   olfactory receptor, family 4, subfamily C, member 12...
OR4A47                0.588   olfactory receptor, family 4, subfamily A, member 4...
OR4C3                 0.583   olfactory receptor, family 4, subfamily C, member 3 ...
OR4S2                 0.571   olfactory receptor, family 4, subfamily S, member 2...
OR4B1                 0.568   olfactory receptor, family 4, subfamily B, member 1 ...
OR4C45                0.568   olfactory receptor, family 4, subfamily C, member 45...
OR4X1                 0.537   olfactory receptor, family 4, subfamily X, member 1 ...
OR4X2                 0.537   olfactory receptor, family 4, subfamily X, member 2 ...
OR4A5                 0.534   olfactory receptor, family 4, subfamily A, member 5 ...
OR4D5                 0.532   olfactory receptor, family 4, subfamily D, member 5 ...
OR4A16                0.531   olfactory receptor, family 4, subfamily A, member 16...
OR4C11                0.525   olfactory receptor, family 4, subfamily C, member 11...
OR4S1                 0.515   olfactory receptor, family 4, subfamily S, member 1 ...
OR4P4                 0.514   olfactory receptor, family 4, subfamily P, member 4 ...
OR4Q3                 0.498   olfactory receptor, family 4, subfamily Q, member 3 ...
OR4D9                 0.492   olfactory receptor, family 4, subfamily D, member 9 ...
OR4D10                0.490   olfactory receptor, family 4, subfamily D, member 10...
OR4K2                 0.488   olfactory receptor, family 4, subfamily K, member 2 ...
OR4K17                0.486   olfactory receptor, family 4, subfamily K, member 17...
OR4D6                 0.486   olfactory receptor, family 4, subfamily D, member 6 ...
OR4D1                 0.485   olfactory receptor, family 4, subfamily D, member 1 ...
OR4E2                 0.485   olfactory receptor, family 4, subfamily E, member 2 ...
OR4C16                0.483   olfactory receptor, family 4, subfamily C, member 1...
OR4D11                0.481   olfactory receptor, family 4, subfamily D, member 11...
OR4N2                 0.476   olfactory receptor, family 4, subfamily N, member 2 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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