Guide to the Human Genome
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Name: OR4D11 Sequence: fasta or formatted (311aa) NCBI GI: 52317241
Description:

olfactory receptor, family 4, subfamily D, member 11

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5         14           1
 C cysteine            3.5         11           1
 D aspartate           2.6          8           1
 E glutamate           2.6          8           1
 F phenylalanine       6.4         20           1
 G glycine             4.2         13           3
 H histidine           1.9          6           1
 I isoleucine          6.8         21           1
 K lysine              3.5         11           3
 L leucine            16.1         50           3
 M methionine          4.2         13           1
 N asparagine          2.6          8           2
 P proline             4.2         13           1
 Q glutamine           2.9          9           1
 R arginine            4.5         14           2
 S serine              8.0         25           2
 T threonine          10.0         31           2
 V valine              7.7         24           2
 W tryptophan          0.6          2           1
 Y tyrosine            3.2         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 4, subfamily D, member 11... 
OR4D9                 0.821   olfactory receptor, family 4, subfamily D, member 9 ...
OR4D10                0.809   olfactory receptor, family 4, subfamily D, member 10...
OR4D6                 0.669   olfactory receptor, family 4, subfamily D, member 6 ...
OR4D1                 0.657   olfactory receptor, family 4, subfamily D, member 1 ...
OR4D2                 0.645   olfactory receptor, family 4, subfamily D, member 2 ...
OR4D5                 0.581   olfactory receptor, family 4, subfamily D, member 5 ...
OR4N5                 0.535   olfactory receptor, family 4, subfamily N, member 5 ...
OR4A47                0.519   olfactory receptor, family 4, subfamily A, member 4...
OR4N2                 0.517   olfactory receptor, family 4, subfamily N, member 2 ...
OR4M1                 0.510   olfactory receptor, family 4, subfamily M, member 1 ...
OR4N4                 0.507   olfactory receptor, family 4, subfamily N, member 4 ...
OR4S2                 0.507   olfactory receptor, family 4, subfamily S, member 2...
OR4E2                 0.503   olfactory receptor, family 4, subfamily E, member 2 ...
OR4A15                0.503   olfactory receptor, family 4, subfamily A, member 15...
OR4Q3                 0.502   olfactory receptor, family 4, subfamily Q, member 3 ...
OR4K14                0.500   olfactory receptor, family 4, subfamily K, member 14...
OR4F4                 0.498   olfactory receptor, family 4, subfamily F, member 4 ...
OR4K15                0.498   olfactory receptor, family 4, subfamily K, member 15...
OR4K17                0.495   olfactory receptor, family 4, subfamily K, member 17...
OR4F17                0.495   olfactory receptor, family 4, subfamily F, member 17...
OR4K13                0.493   olfactory receptor, family 4, subfamily K, member 13...
OR4F5                 0.492   olfactory receptor, family 4, subfamily F, member 5 ...
OR4M2                 0.492   olfactory receptor, family 4, subfamily M, member 2 ...
OR4B1                 0.485   olfactory receptor, family 4, subfamily B, member 1 ...
OR4L1                 0.485   olfactory receptor, family 4, subfamily L, member 1 ...
OR4C3                 0.483   olfactory receptor, family 4, subfamily C, member 3 ...
OR4C12                0.481   olfactory receptor, family 4, subfamily C, member 12...
OR4C6                 0.480   olfactory receptor, family 4, subfamily C, member 6 ...
OR4K2                 0.478   olfactory receptor, family 4, subfamily K, member 2 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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