Guide to the Human Genome
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Name: OR4C13 Sequence: fasta or formatted (309aa) NCBI GI: 53828680
Description:

olfactory receptor, family 4, subfamily C, member 13

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         19           2
 C cysteine            4.5         14           1
 D aspartate           1.9          6           1
 E glutamate           2.3          7           1
 F phenylalanine       6.1         19           2
 G glycine             3.6         11           2
 H histidine           3.2         10           1
 I isoleucine         10.0         31           2
 K lysine              3.9         12           1
 L leucine            12.6         39           4
 M methionine          3.9         12           1
 N asparagine          5.5         17           2
 P proline             3.9         12           2
 Q glutamine           1.9          6           1
 R arginine            2.6          8           1
 S serine              6.8         21           2
 T threonine           7.4         23           2
 V valine              9.1         28           2
 W tryptophan          0.3          1           1
 Y tyrosine            4.2         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 4, subfamily C, member 13... 
OR4C46                0.820   olfactory receptor, family 4, subfamily C, member 46...
OR4C12                0.663   olfactory receptor, family 4, subfamily C, member 12...
OR4C15                0.641   olfactory receptor, family 4, subfamily C, member 15...
OR4C3                 0.628   olfactory receptor, family 4, subfamily C, member 3 ...
OR4C6                 0.612   olfactory receptor, family 4, subfamily C, member 6 ...
OR4A15                0.604   olfactory receptor, family 4, subfamily A, member 15...
OR4A47                0.596   olfactory receptor, family 4, subfamily A, member 4...
OR4C45                0.570   olfactory receptor, family 4, subfamily C, member 45...
OR4S2                 0.565   olfactory receptor, family 4, subfamily S, member 2...
OR4C11                0.562   olfactory receptor, family 4, subfamily C, member 11...
OR4A5                 0.552   olfactory receptor, family 4, subfamily A, member 5 ...
OR4B1                 0.547   olfactory receptor, family 4, subfamily B, member 1 ...
OR4X1                 0.539   olfactory receptor, family 4, subfamily X, member 1 ...
OR4A16                0.537   olfactory receptor, family 4, subfamily A, member 16...
OR4X2                 0.534   olfactory receptor, family 4, subfamily X, member 2 ...
OR4S1                 0.527   olfactory receptor, family 4, subfamily S, member 1 ...
OR4P4                 0.515   olfactory receptor, family 4, subfamily P, member 4 ...
OR4D5                 0.515   olfactory receptor, family 4, subfamily D, member 5 ...
OR4C16                0.510   olfactory receptor, family 4, subfamily C, member 1...
OR4K15                0.492   olfactory receptor, family 4, subfamily K, member 15...
OR4Q3                 0.488   olfactory receptor, family 4, subfamily Q, member 3 ...
OR4E2                 0.485   olfactory receptor, family 4, subfamily E, member 2 ...
OR4D9                 0.475   olfactory receptor, family 4, subfamily D, member 9 ...
OR4K2                 0.475   olfactory receptor, family 4, subfamily K, member 2 ...
OR4D1                 0.471   olfactory receptor, family 4, subfamily D, member 1 ...
OR4D10                0.471   olfactory receptor, family 4, subfamily D, member 10...
OR4F4                 0.466   olfactory receptor, family 4, subfamily F, member 4 ...
OR4K17                0.465   olfactory receptor, family 4, subfamily K, member 17...
OR4F17                0.465   olfactory receptor, family 4, subfamily F, member 17...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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