Guide to the Human Genome
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Name: OR4C16 Sequence: fasta or formatted (310aa) NCBI GI: 116517323
Description:

olfactory receptor, family 4, subfamily C, member 16

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5         14           1
 C cysteine            4.5         14           1
 D aspartate           2.9          9           2
 E glutamate           1.9          6           1
 F phenylalanine       7.4         23           3
 G glycine             3.2         10           1
 H histidine           2.3          7           1
 I isoleucine          9.4         29           3
 K lysine              5.5         17           2
 L leucine            13.9         43           3
 M methionine          3.5         11           1
 N asparagine          3.9         12           3
 P proline             3.2         10           1
 Q glutamine           2.6          8           1
 R arginine            1.9          6           1
 S serine              8.4         26           2
 T threonine           6.5         20           2
 V valine             10.0         31           2
 W tryptophan          1.3          4           1
 Y tyrosine            3.2         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 4, subfamily C, member 1... 
OR4C11                0.695   olfactory receptor, family 4, subfamily C, member 11...
OR4C12                0.554   olfactory receptor, family 4, subfamily C, member 12...
OR4S2                 0.537   olfactory receptor, family 4, subfamily S, member 2...
OR4C15                0.534   olfactory receptor, family 4, subfamily C, member 15...
OR4A47                0.529   olfactory receptor, family 4, subfamily A, member 4...
OR4A15                0.527   olfactory receptor, family 4, subfamily A, member 15...
OR4C46                0.520   olfactory receptor, family 4, subfamily C, member 46...
OR4B1                 0.517   olfactory receptor, family 4, subfamily B, member 1 ...
OR4C13                0.510   olfactory receptor, family 4, subfamily C, member 13...
OR4C3                 0.503   olfactory receptor, family 4, subfamily C, member 3 ...
OR4P4                 0.495   olfactory receptor, family 4, subfamily P, member 4 ...
OR4A5                 0.487   olfactory receptor, family 4, subfamily A, member 5 ...
OR4X2                 0.483   olfactory receptor, family 4, subfamily X, member 2 ...
OR4A16                0.482   olfactory receptor, family 4, subfamily A, member 16...
OR4X1                 0.480   olfactory receptor, family 4, subfamily X, member 1 ...
OR4C45                0.480   olfactory receptor, family 4, subfamily C, member 45...
OR4C6                 0.478   olfactory receptor, family 4, subfamily C, member 6 ...
OR4E2                 0.465   olfactory receptor, family 4, subfamily E, member 2 ...
OR4N5                 0.455   olfactory receptor, family 4, subfamily N, member 5 ...
OR4S1                 0.451   olfactory receptor, family 4, subfamily S, member 1 ...
OR4K15                0.445   olfactory receptor, family 4, subfamily K, member 15...
OR4D5                 0.438   olfactory receptor, family 4, subfamily D, member 5 ...
OR4Q3                 0.426   olfactory receptor, family 4, subfamily Q, member 3 ...
OR4D10                0.424   olfactory receptor, family 4, subfamily D, member 10...
OR4K2                 0.423   olfactory receptor, family 4, subfamily K, member 2 ...
OR4D1                 0.421   olfactory receptor, family 4, subfamily D, member 1 ...
OR4D11                0.421   olfactory receptor, family 4, subfamily D, member 11...
OR4K17                0.421   olfactory receptor, family 4, subfamily K, member 17...
OR4K5                 0.418   olfactory receptor, family 4, subfamily K, member 5 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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