Guide to the Human Genome
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Name: OR4F4 Sequence: fasta or formatted (305aa) NCBI GI: 57528066
Description:

olfactory receptor, family 4, subfamily F, member 4

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         17           1
 C cysteine            3.3         10           1
 D aspartate           4.3         13           1
 E glutamate           1.3          4           1
 F phenylalanine       9.2         28           2
 G glycine             4.9         15           2
 H histidine           3.0          9           1
 I isoleucine          9.8         30           2
 K lysine              4.3         13           1
 L leucine            13.1         40           2
 M methionine          3.6         11           1
 N asparagine          2.3          7           1
 P proline             3.9         12           1
 Q glutamine           2.0          6           1
 R arginine            2.6          8           2
 S serine              8.2         25           2
 T threonine           5.9         18           2
 V valine              8.5         26           2
 W tryptophan          1.0          3           1
 Y tyrosine            3.3         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 4, subfamily F, member 4 ... 
OR4F17                0.985   olfactory receptor, family 4, subfamily F, member 17...
OR4F5                 0.981   olfactory receptor, family 4, subfamily F, member 5 ...
OR4K15                0.608   olfactory receptor, family 4, subfamily K, member 15...
OR4K1                 0.603   olfactory receptor, family 4, subfamily K, member 1 ...
OR4K5                 0.588   olfactory receptor, family 4, subfamily K, member 5 ...
OR4F15                0.586   olfactory receptor, family 4, subfamily F, member 15...
OR4K14                0.584   olfactory receptor, family 4, subfamily K, member 14...
OR4F6                 0.578   olfactory receptor, family 4, subfamily F, member 6 ...
OR4F3                 0.578   olfactory receptor, family 4, subfamily F, member 3 ...
OR4F29                0.578   olfactory receptor, family 4, subfamily F, member 2...
OR4F16                0.578   olfactory receptor, family 4, subfamily F, member 16...
OR4K13                0.578   olfactory receptor, family 4, subfamily K, member 13...
OR4K17                0.576   olfactory receptor, family 4, subfamily K, member 17...
OR4F21                0.576   olfactory receptor, family 4, subfamily F, member 21...
OR4K2                 0.571   olfactory receptor, family 4, subfamily K, member 2 ...
OR4L1                 0.554   olfactory receptor, family 4, subfamily L, member 1 ...
OR4Q3                 0.545   olfactory receptor, family 4, subfamily Q, member 3 ...
OR4D1                 0.523   olfactory receptor, family 4, subfamily D, member 1 ...
OR4D9                 0.514   olfactory receptor, family 4, subfamily D, member 9 ...
OR4N5                 0.513   olfactory receptor, family 4, subfamily N, member 5 ...
OR4M1                 0.511   olfactory receptor, family 4, subfamily M, member 1 ...
OR4D2                 0.503   olfactory receptor, family 4, subfamily D, member 2 ...
OR4D11                0.503   olfactory receptor, family 4, subfamily D, member 11...
OR4S2                 0.499   olfactory receptor, family 4, subfamily S, member 2...
OR4N4                 0.494   olfactory receptor, family 4, subfamily N, member 4 ...
OR4M2                 0.492   olfactory receptor, family 4, subfamily M, member 2 ...
OR4N2                 0.489   olfactory receptor, family 4, subfamily N, member 2 ...
OR4D10                0.487   olfactory receptor, family 4, subfamily D, member 10...
OR4E2                 0.482   olfactory receptor, family 4, subfamily E, member 2 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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