Guide to the Human Genome
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Name: OR4S1 Sequence: fasta or formatted (309aa) NCBI GI: 52317102
Description:

olfactory receptor, family 4, subfamily S, member 1

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         20           2
 C cysteine            3.2         10           1
 D aspartate           3.2         10           1
 E glutamate           2.6          8           1
 F phenylalanine       8.1         25           2
 G glycine             4.5         14           2
 H histidine           2.6          8           1
 I isoleucine          8.4         26           2
 K lysine              4.2         13           1
 L leucine            13.9         43           2
 M methionine          4.5         14           1
 N asparagine          4.5         14           2
 P proline             4.2         13           2
 Q glutamine           1.9          6           1
 R arginine            4.2         13           2
 S serine              6.5         20           2
 T threonine           6.5         20           2
 V valine              7.1         22           2
 W tryptophan          0.3          1           1
 Y tyrosine            2.9          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 4, subfamily S, member 1 ... 
OR4S2                 0.606   olfactory receptor, family 4, subfamily S, member 2...
OR4C3                 0.552   olfactory receptor, family 4, subfamily C, member 3 ...
OR4X1                 0.549   olfactory receptor, family 4, subfamily X, member 1 ...
OR4P4                 0.547   olfactory receptor, family 4, subfamily P, member 4 ...
OR4B1                 0.542   olfactory receptor, family 4, subfamily B, member 1 ...
OR4C15                0.539   olfactory receptor, family 4, subfamily C, member 15...
OR4C46                0.535   olfactory receptor, family 4, subfamily C, member 46...
OR4C13                0.530   olfactory receptor, family 4, subfamily C, member 13...
OR4C12                0.529   olfactory receptor, family 4, subfamily C, member 12...
OR4X2                 0.529   olfactory receptor, family 4, subfamily X, member 2 ...
OR4A15                0.524   olfactory receptor, family 4, subfamily A, member 15...
OR4Q3                 0.520   olfactory receptor, family 4, subfamily Q, member 3 ...
OR4C11                0.520   olfactory receptor, family 4, subfamily C, member 11...
OR4C6                 0.514   olfactory receptor, family 4, subfamily C, member 6 ...
OR4A47                0.507   olfactory receptor, family 4, subfamily A, member 4...
OR4E2                 0.495   olfactory receptor, family 4, subfamily E, member 2 ...
OR4M1                 0.490   olfactory receptor, family 4, subfamily M, member 1 ...
OR4D5                 0.490   olfactory receptor, family 4, subfamily D, member 5 ...
OR4C45                0.485   olfactory receptor, family 4, subfamily C, member 45...
OR4K14                0.483   olfactory receptor, family 4, subfamily K, member 14...
OR4N5                 0.481   olfactory receptor, family 4, subfamily N, member 5 ...
OR4K15                0.478   olfactory receptor, family 4, subfamily K, member 15...
OR4D9                 0.475   olfactory receptor, family 4, subfamily D, member 9 ...
OR4N2                 0.475   olfactory receptor, family 4, subfamily N, member 2 ...
OR4M2                 0.473   olfactory receptor, family 4, subfamily M, member 2 ...
OR4N4                 0.473   olfactory receptor, family 4, subfamily N, member 4 ...
OR4D10                0.471   olfactory receptor, family 4, subfamily D, member 10...
OR4A5                 0.471   olfactory receptor, family 4, subfamily A, member 5 ...
OR4K1                 0.470   olfactory receptor, family 4, subfamily K, member 1 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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