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Search of human proteins with 52486265
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|52486265 paraneoplastic antigen MA1 [Homo sapiens]
(353 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|52486265 paraneoplastic antigen MA1 [Homo sapiens] 711 0.0
gi|19923584 modulator of apoptosis 1 [Homo sapiens] 380 e-105
gi|11464969 paraneoplastic antigen MA2 [Homo sapiens] 321 5e-88
gi|142976816 paraneoplastic cancer-testis-brain antigen [Homo sa... 316 2e-86
gi|156766066 paraneoplastic antigen like 5 [Homo sapiens] 314 7e-86
gi|156766064 paraneoplastic antigen like 5 [Homo sapiens] 314 7e-86
gi|24308384 paraneoplastic antigen like 5 [Homo sapiens] 314 7e-86
gi|239746974 PREDICTED: hypothetical protein XP_002343900 [Homo ... 263 2e-70
gi|187607308 paraneoplastic antigen like 6A [Homo sapiens] 263 2e-70
gi|239746972 PREDICTED: hypothetical protein XP_002343899 [Homo ... 258 4e-69
gi|239746970 PREDICTED: hypothetical protein XP_002343898 [Homo ... 258 4e-69
gi|169217313 PREDICTED: similar to paraneoplastic antigen MA1 [H... 171 9e-43
gi|169216516 PREDICTED: similar to paraneoplastic antigen MA1 [H... 171 9e-43
gi|239746976 PREDICTED: similar to paraneoplastic antigen MA1 [H... 171 9e-43
gi|169216507 PREDICTED: similar to hCG1645335 [Homo sapiens] 166 3e-41
gi|169216732 PREDICTED: similar to hCG1645335 [Homo sapiens] 166 3e-41
gi|156766054 PNMA-like 1 isoform b [Homo sapiens] 151 7e-37
gi|39780597 PNMA-like 1 isoform a [Homo sapiens] 151 7e-37
gi|221136806 zinc finger, CCHC domain containing 18 [Homo sapiens] 151 1e-36
gi|28557790 zinc finger, CCHC domain containing 12 [Homo sapiens] 150 1e-36
gi|146219841 PNMA-like 2 [Homo sapiens] 104 1e-22
gi|169216514 PREDICTED: similar to paraneoplastic antigen MA2 [H... 97 2e-20
gi|169216749 PREDICTED: similar to Putative paraneoplastic antig... 97 2e-20
gi|199559779 coiled-coil domain containing 8 [Homo sapiens] 73 3e-13
gi|7661892 REST corepressor 1 [Homo sapiens] 35 0.13
gi|219803769 trichoplein [Homo sapiens] 33 0.50
gi|14150056 trichoplein [Homo sapiens] 33 0.50
gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo... 32 1.1
gi|114688046 TBC1 domain family, member 4 [Homo sapiens] 31 1.5
gi|114155146 tropomyosin 3 isoform 3 [Homo sapiens] 31 1.9
>gi|52486265 paraneoplastic antigen MA1 [Homo sapiens]
Length = 353
Score = 711 bits (1834), Expect = 0.0
Identities = 353/353 (100%), Positives = 353/353 (100%)
Query: 1 MAMTLLEDWCRGMDVNSQRALLVWGIPVNCDEAEIEETLQAAMPQVSYRMLGRMFWREEN 60
MAMTLLEDWCRGMDVNSQRALLVWGIPVNCDEAEIEETLQAAMPQVSYRMLGRMFWREEN
Sbjct: 1 MAMTLLEDWCRGMDVNSQRALLVWGIPVNCDEAEIEETLQAAMPQVSYRMLGRMFWREEN 60
Query: 61 AKAALLELTGAVDYAAIPREMPGKGGVWKVLFKPPTSDAEFLERLHLFLAREGWTVQDVA 120
AKAALLELTGAVDYAAIPREMPGKGGVWKVLFKPPTSDAEFLERLHLFLAREGWTVQDVA
Sbjct: 61 AKAALLELTGAVDYAAIPREMPGKGGVWKVLFKPPTSDAEFLERLHLFLAREGWTVQDVA 120
Query: 121 RVLGFQNPTPTPGPEMPAEMLNYILDNVIQPLVESIWYKRLTLFSGRDIPGPGEETFDPW 180
RVLGFQNPTPTPGPEMPAEMLNYILDNVIQPLVESIWYKRLTLFSGRDIPGPGEETFDPW
Sbjct: 121 RVLGFQNPTPTPGPEMPAEMLNYILDNVIQPLVESIWYKRLTLFSGRDIPGPGEETFDPW 180
Query: 181 LEHTNEVLEEWQVSDVEKRRRLMESLRGPAADVIRILKSNNPAITTAECLKALEQVFGSV 240
LEHTNEVLEEWQVSDVEKRRRLMESLRGPAADVIRILKSNNPAITTAECLKALEQVFGSV
Sbjct: 181 LEHTNEVLEEWQVSDVEKRRRLMESLRGPAADVIRILKSNNPAITTAECLKALEQVFGSV 240
Query: 241 ESSRDAQIKFLNTYQNPGEKLSAYVIRLEPLLQKVVEKGAIDKDNVNQARLEQVIAGANH 300
ESSRDAQIKFLNTYQNPGEKLSAYVIRLEPLLQKVVEKGAIDKDNVNQARLEQVIAGANH
Sbjct: 241 ESSRDAQIKFLNTYQNPGEKLSAYVIRLEPLLQKVVEKGAIDKDNVNQARLEQVIAGANH 300
Query: 301 SGAIRRQLWLTGAGEGPAPNLFQLLVQIREEEAKEEEEEAEATLLQLGLEGHF 353
SGAIRRQLWLTGAGEGPAPNLFQLLVQIREEEAKEEEEEAEATLLQLGLEGHF
Sbjct: 301 SGAIRRQLWLTGAGEGPAPNLFQLLVQIREEEAKEEEEEAEATLLQLGLEGHF 353
>gi|19923584 modulator of apoptosis 1 [Homo sapiens]
Length = 351
Score = 380 bits (976), Expect = e-105
Identities = 203/358 (56%), Positives = 260/358 (72%), Gaps = 13/358 (3%)
Query: 1 MAMTLLEDWCRGMDVNSQRALLVWGIPVNCDEAEIEETLQAAM-PQVSYRMLGRMFWREE 59
M + LLEDWCRGMD+N ++ALL+ GI +C AEIEE LQA + P YR+LGRMF R+E
Sbjct: 1 MTLRLLEDWCRGMDMNPRKALLIAGISQSCSVAEIEEALQAGLAPLGEYRLLGRMFRRDE 60
Query: 60 NAKAALLELTGAVDYAAIPREMPGKGGVWKVLFKPPTSDAEFLERLHLFLAREGWTVQDV 119
N K AL+ LT +A +P+E+PGKGG+W+V+FKPP D FL RL+ FLA EG TV ++
Sbjct: 61 NRKVALVGLTAETSHALVPKEIPGKGGIWRVIFKPPDPDNTFLSRLNEFLAGEGMTVGEL 120
Query: 120 ARVLGFQNPTPTPG----PEMPAEMLNYILDNVIQPLVESIWYKRLTLFSGRDIPGPGEE 175
+R LG +N + P PEM A ML L+ +QP ++ + YK+L +FSGR+ P PGEE
Sbjct: 121 SRALGHENGSLDPEQGMIPEMWAPMLAQALE-ALQPALQCLKYKKLRVFSGRESPEPGEE 179
Query: 176 TFDPWLEHTNEVLEEWQVSDVEKRRRLMESLRGPAADVIRILKSNNPAITTAECLKALEQ 235
F W+ HT ++++ WQV DVEKRRRL+ESLRGPA DVIR+LK NNP IT ECL+ALE+
Sbjct: 180 EFGRWMFHTTQMIKAWQVPDVEKRRRLLESLRGPALDVIRVLKINNPLITVDECLQALEE 239
Query: 236 VFGSVESSRDAQIKFLNTYQNPGEKLSAYVIRLEPLLQKVVEKGAIDKDNVNQARLEQVI 295
VFG ++ R+ Q+K+L TYQ EKLSAYV+RLEPLLQK+V++GAI++D VNQARL+QVI
Sbjct: 240 VFGVTDNPRELQVKYLTTYQKDEEKLSAYVLRLEPLLQKLVQRGAIERDAVNQARLDQVI 299
Query: 296 AGANHSGAIRRQLWLTGAGEGPAPNLFQLLVQIREEEAKEEEEEAEATLLQLGLEGHF 353
AGA H IRR+L L +GPAP QLLV I++ EA EEEE LLQ LEG+F
Sbjct: 300 AGAVHK-TIRRELNL--PEDGPAPGFLQLLVLIKDYEAAEEEE----ALLQAILEGNF 350
>gi|11464969 paraneoplastic antigen MA2 [Homo sapiens]
Length = 364
Score = 321 bits (823), Expect = 5e-88
Identities = 169/350 (48%), Positives = 239/350 (68%), Gaps = 13/350 (3%)
Query: 1 MAMTLLEDWCRGMDVNSQRALLVWGIPVNCDEAEIEETLQAAMPQVS-YRMLGRMFWREE 59
MA+ LLEDWCR M V+ Q++L+V GIP + +EAEI+E LQ + + YR+LG++F ++E
Sbjct: 1 MALALLEDWCRIMSVDEQKSLMVTGIPADFEEAEIQEVLQETLKSLGRYRLLGKIFRKQE 60
Query: 60 NAKAALLELTGAVDYAAIPREMPGKGGVWKVLFKPPTSDAEFLERLHLFLAREGWTVQDV 119
NA A LLEL D +AIP E+ GKGGVWKV+FK P D EFLERL+LFL +EG TV +
Sbjct: 61 NANAVLLELLEDTDVSAIPSEVQGKGGVWKVIFKTPNQDTEFLERLNLFLEKEGQTVSGM 120
Query: 120 ARVLGFQNPTPTP----GPEMPAEMLNYILDNVIQPLVESIWYKRLTLFSGRDIPGPGEE 175
R LG + +P PE+ A +L + + QPL+ + Y++L +FSG +P P EE
Sbjct: 121 FRALGQEGVSPATVPCISPELLAHLLGQAMAHAPQPLLP-MRYRKLRVFSGSAVPAPEEE 179
Query: 176 TFDPWLEHTNEVLEEWQVSDVEKRRRLMESLRGPAADVIRILKSNNPAITTAECLKALEQ 235
+F+ WLE E+++EW V++ EK+R L ESLRGPA D++ I++++NP+I+ ECL+A +Q
Sbjct: 180 SFEVWLEQATEIVKEWPVTEAEKKRWLAESLRGPALDLMHIVQADNPSISVEECLEAFKQ 239
Query: 236 VFGSVESSRDAQIKFLNTYQNPGEKLSAYVIRLEPLLQKVVEKGAIDKDNVNQARLEQVI 295
VFGS+ES R AQ+++L TYQ GEK+SAYV+RLE LL++ VEK AI + +Q RLEQV+
Sbjct: 240 VFGSLESRRTAQVRYLKTYQEEGEKVSAYVLRLETLLRRAVEKRAIPRRIADQVRLEQVM 299
Query: 296 AGANHSGAIRRQLWL---TGAGEGPAPNLFQLLVQIREEEAKEEEEEAEA 342
AGA + + LW +GP P+ +L+ IREEE +E E E+
Sbjct: 300 AGA----TLNQMLWCRLRELKDQGPPPSFLELMKVIREEEEEEASFENES 345
>gi|142976816 paraneoplastic cancer-testis-brain antigen [Homo
sapiens]
Length = 463
Score = 316 bits (809), Expect = 2e-86
Identities = 172/347 (49%), Positives = 224/347 (64%), Gaps = 10/347 (2%)
Query: 1 MAMTLLEDWCRGMDVNSQRALLVWGIPVNCDEAEIEETLQAAMPQVS-YRMLGRMFWREE 59
M +TLL+DWCRG +N++R +L+ GIP +C E E EETLQ A + YR++GRMF REE
Sbjct: 1 MPLTLLQDWCRGEHLNTRRCMLILGIPEDCGEDEFEETLQEACRHLGRYRVIGRMFRREE 60
Query: 60 NAKAALLELTGAVDYAAIPREMPGKGGVWKVLFKPPTSDAEFLERLHLFLAREGWTVQDV 119
NA+A LLEL +DYA +PRE+PGKGG W+V+ KP SD EFL RL+ FL E TV D+
Sbjct: 61 NAQAILLELAQDIDYALLPREIPGKGGPWEVIVKPRNSDGEFLNRLNRFLEEERRTVSDM 120
Query: 120 ARVLGFQNPTPTPGPEMPAEMLNYI--LDNVIQPLVESIWYKRLTLFSGRDIPGPGEETF 177
RVLG P + E + L +QPL+E + Y+ L +FSG I PG F
Sbjct: 121 NRVLGSDTNCSAPRVTISPEFWTWAQTLGAAVQPLLEQMLYRELRVFSGNTISIPGALAF 180
Query: 178 DPWLEHTNEVLEEWQVSDVEKRRRLMESLRGPAADVIRILKSNNPAITTAECLKALEQVF 237
D WLEHT E+L+ WQV + EKRRRLME LRGPA V+ L+++N +IT ECL AL+QVF
Sbjct: 181 DAWLEHTTEMLQMWQVPEGEKRRRLMECLRGPALQVVSGLRASNASITVEECLAALQQVF 240
Query: 238 GSVESSRDAQIKFLNTYQNPGEKLSAYVIRLEPLLQKVVEKGAIDKDNVNQARLEQVIAG 297
G VES + AQ+K YQ GEK+S++V+RLEPLLQ+ VE + + NVNQ RL++V++G
Sbjct: 241 GPVESHKIAQVKLCKAYQEAGEKVSSFVLRLEPLLQRAVENNVVSRRNVNQTRLKRVLSG 300
Query: 298 ANHSGAIRRQLWLTGAGEGPAPNLFQLLVQIREEEAKEEEEEAEATL 344
A +R +L L P P L+ +R EEEE EATL
Sbjct: 301 ATLPDKLRDKLKLMKQRRKP-PGFLALVKLLR------EEEEWEATL 340
>gi|156766066 paraneoplastic antigen like 5 [Homo sapiens]
Length = 448
Score = 314 bits (805), Expect = 7e-86
Identities = 159/339 (46%), Positives = 227/339 (66%), Gaps = 5/339 (1%)
Query: 1 MAMTLLEDWCRGMDVNSQRALLVWGIPVNCDEAEIEETLQAAM-PQVSYRMLGRMFWREE 59
MA+TLLEDWC+GMD++ ++ALL+ GIP+ C E EI++T++A + P +YR+LGRMF RE+
Sbjct: 1 MALTLLEDWCKGMDMDPRKALLIVGIPMECSEVEIQDTVKAGLQPLCAYRVLGRMFRRED 60
Query: 60 NAKAALLELTGAVDYAAIPREMPGKGGVWKVLFKPPTSDAEFLERLHLFLAREGWTVQDV 119
NAKA +EL V+Y +P +PGKGG W+V+ KP D EFL RL+ FL EG ++ DV
Sbjct: 61 NAKAVFIELADTVNYTTLPSHIPGKGGSWEVVVKPRNPDDEFLSRLNYFLKDEGRSMTDV 120
Query: 120 ARVLGFQNPTPTPGPEMPAEMLNYILDNVIQPLVESIWYKRLTLFSGRDIPGPGEETFDP 179
AR LG + P + AE++ + ++P ES+WY++L +FSG P PGEETF+
Sbjct: 121 ARALGCCS---LPAESLDAEVMPQVRSPPLEPPKESMWYRKLKVFSGTASPSPGEETFED 177
Query: 180 WLEHTNEVLEEWQVSDVEKRRRLMESLRGPAADVIRILKSNNPAITTAECLKALEQVFGS 239
WLE E++ WQVS+VEKRRRL+ESLRGPA ++R+L++NN +IT +CL AL+Q+FG
Sbjct: 178 WLEQVTEIMPIWQVSEVEKRRRLLESLRGPALSIMRVLQANNDSITVEQCLDALKQIFGD 237
Query: 240 VESSRDAQIKFLNTYQNPGEKLSAYVIRLEPLLQKVVEKGAIDKDNVNQARLEQVIAGAN 299
E R +Q +FL T GEK+S +++RLEPLLQK V K + + + RL+ ++A
Sbjct: 238 KEDFRASQFRFLQTSPKIGEKVSTFLLRLEPLLQKAVHKSPLSVRSTDMIRLKHLLARVA 297
Query: 300 HSGAIRRQLWLTGAGEGPAPNLFQLLVQIREEEAKEEEE 338
+ A+R +L L G PN +L+ IR+EE E E
Sbjct: 298 MTPALRGKLELLDQ-RGCPPNFLELMKLIRDEEEWENTE 335
>gi|156766064 paraneoplastic antigen like 5 [Homo sapiens]
Length = 448
Score = 314 bits (805), Expect = 7e-86
Identities = 159/339 (46%), Positives = 227/339 (66%), Gaps = 5/339 (1%)
Query: 1 MAMTLLEDWCRGMDVNSQRALLVWGIPVNCDEAEIEETLQAAM-PQVSYRMLGRMFWREE 59
MA+TLLEDWC+GMD++ ++ALL+ GIP+ C E EI++T++A + P +YR+LGRMF RE+
Sbjct: 1 MALTLLEDWCKGMDMDPRKALLIVGIPMECSEVEIQDTVKAGLQPLCAYRVLGRMFRRED 60
Query: 60 NAKAALLELTGAVDYAAIPREMPGKGGVWKVLFKPPTSDAEFLERLHLFLAREGWTVQDV 119
NAKA +EL V+Y +P +PGKGG W+V+ KP D EFL RL+ FL EG ++ DV
Sbjct: 61 NAKAVFIELADTVNYTTLPSHIPGKGGSWEVVVKPRNPDDEFLSRLNYFLKDEGRSMTDV 120
Query: 120 ARVLGFQNPTPTPGPEMPAEMLNYILDNVIQPLVESIWYKRLTLFSGRDIPGPGEETFDP 179
AR LG + P + AE++ + ++P ES+WY++L +FSG P PGEETF+
Sbjct: 121 ARALGCCS---LPAESLDAEVMPQVRSPPLEPPKESMWYRKLKVFSGTASPSPGEETFED 177
Query: 180 WLEHTNEVLEEWQVSDVEKRRRLMESLRGPAADVIRILKSNNPAITTAECLKALEQVFGS 239
WLE E++ WQVS+VEKRRRL+ESLRGPA ++R+L++NN +IT +CL AL+Q+FG
Sbjct: 178 WLEQVTEIMPIWQVSEVEKRRRLLESLRGPALSIMRVLQANNDSITVEQCLDALKQIFGD 237
Query: 240 VESSRDAQIKFLNTYQNPGEKLSAYVIRLEPLLQKVVEKGAIDKDNVNQARLEQVIAGAN 299
E R +Q +FL T GEK+S +++RLEPLLQK V K + + + RL+ ++A
Sbjct: 238 KEDFRASQFRFLQTSPKIGEKVSTFLLRLEPLLQKAVHKSPLSVRSTDMIRLKHLLARVA 297
Query: 300 HSGAIRRQLWLTGAGEGPAPNLFQLLVQIREEEAKEEEE 338
+ A+R +L L G PN +L+ IR+EE E E
Sbjct: 298 MTPALRGKLELLDQ-RGCPPNFLELMKLIRDEEEWENTE 335
>gi|24308384 paraneoplastic antigen like 5 [Homo sapiens]
Length = 448
Score = 314 bits (805), Expect = 7e-86
Identities = 159/339 (46%), Positives = 227/339 (66%), Gaps = 5/339 (1%)
Query: 1 MAMTLLEDWCRGMDVNSQRALLVWGIPVNCDEAEIEETLQAAM-PQVSYRMLGRMFWREE 59
MA+TLLEDWC+GMD++ ++ALL+ GIP+ C E EI++T++A + P +YR+LGRMF RE+
Sbjct: 1 MALTLLEDWCKGMDMDPRKALLIVGIPMECSEVEIQDTVKAGLQPLCAYRVLGRMFRRED 60
Query: 60 NAKAALLELTGAVDYAAIPREMPGKGGVWKVLFKPPTSDAEFLERLHLFLAREGWTVQDV 119
NAKA +EL V+Y +P +PGKGG W+V+ KP D EFL RL+ FL EG ++ DV
Sbjct: 61 NAKAVFIELADTVNYTTLPSHIPGKGGSWEVVVKPRNPDDEFLSRLNYFLKDEGRSMTDV 120
Query: 120 ARVLGFQNPTPTPGPEMPAEMLNYILDNVIQPLVESIWYKRLTLFSGRDIPGPGEETFDP 179
AR LG + P + AE++ + ++P ES+WY++L +FSG P PGEETF+
Sbjct: 121 ARALGCCS---LPAESLDAEVMPQVRSPPLEPPKESMWYRKLKVFSGTASPSPGEETFED 177
Query: 180 WLEHTNEVLEEWQVSDVEKRRRLMESLRGPAADVIRILKSNNPAITTAECLKALEQVFGS 239
WLE E++ WQVS+VEKRRRL+ESLRGPA ++R+L++NN +IT +CL AL+Q+FG
Sbjct: 178 WLEQVTEIMPIWQVSEVEKRRRLLESLRGPALSIMRVLQANNDSITVEQCLDALKQIFGD 237
Query: 240 VESSRDAQIKFLNTYQNPGEKLSAYVIRLEPLLQKVVEKGAIDKDNVNQARLEQVIAGAN 299
E R +Q +FL T GEK+S +++RLEPLLQK V K + + + RL+ ++A
Sbjct: 238 KEDFRASQFRFLQTSPKIGEKVSTFLLRLEPLLQKAVHKSPLSVRSTDMIRLKHLLARVA 297
Query: 300 HSGAIRRQLWLTGAGEGPAPNLFQLLVQIREEEAKEEEE 338
+ A+R +L L G PN +L+ IR+EE E E
Sbjct: 298 MTPALRGKLELLDQ-RGCPPNFLELMKLIRDEEEWENTE 335
>gi|239746974 PREDICTED: hypothetical protein XP_002343900 [Homo
sapiens]
Length = 399
Score = 263 bits (671), Expect = 2e-70
Identities = 149/339 (43%), Positives = 214/339 (63%), Gaps = 14/339 (4%)
Query: 1 MAMTLLEDWCRGMDVNSQRALLVWGIPVNCDEAEIEETLQAAM-PQVSYRMLGRMFWREE 59
MA+T+L+DWCR M VN++R LL+ GIP +CD+AE +E+L+AA+ P + +LG++F E+
Sbjct: 1 MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGKVFREED 60
Query: 60 NAKAALLELTGAVDYAAIPREMPGKGGVWKVLFKPPTSDAEFLE--RLHLFLAREGWTVQ 117
NA AAL+EL V+YA +PRE+PG GG W V+F P S EFL R+ F +EG V+
Sbjct: 61 NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFLGLGRVFHFPEQEGQMVE 120
Query: 118 DVARVLGFQNPTPTPGPEMPAEMLNYILDNVIQPLVESIWYKRLTLFSGRDIPGPGEETF 177
VA LG G + + + +QP VE++ Y+ L +FSGRD P PGEE+F
Sbjct: 121 SVAGALGV-------GLRRVCWLRS--IGQAVQPWVEAVRYQSLGVFSGRDQPAPGEESF 171
Query: 178 DPWLEHTNEVLEEWQ-VSDVEKRRRLMESLRGPAADVIRILKSNNPAITTAECLKALEQV 236
+ WL+HT E+L WQ VS+ E+RRRL+E LRG A ++ L + NPA T +CL AL QV
Sbjct: 172 EVWLDHTTEMLHVWQGVSERERRRRLLEGLRGTALQLVHALLAENPARTAQDCLAALAQV 231
Query: 237 FGSVESSRDAQIKFLNTYQNPGEKLSAYVIRLEPLLQKVVEKGAIDKDNVNQARLEQVIA 296
FG ES ++K L Q GE+LSA+V+RLE LLQK +EK A+ + + ++ RL Q++
Sbjct: 232 FGDNESQATIRVKCLTAQQQSGERLSAFVLRLEVLLQKAMEKEALARASADRVRLRQMLT 291
Query: 297 GANHSGAIRRQLWLTGAGEGPAPNLFQLLVQIREEEAKE 335
A+ + + L G +P+ ++L +RE EA E
Sbjct: 292 RAHLTEPLDEALRKLRMA-GRSPSFLEMLGLVRESEAWE 329
>gi|187607308 paraneoplastic antigen like 6A [Homo sapiens]
Length = 399
Score = 263 bits (671), Expect = 2e-70
Identities = 149/339 (43%), Positives = 214/339 (63%), Gaps = 14/339 (4%)
Query: 1 MAMTLLEDWCRGMDVNSQRALLVWGIPVNCDEAEIEETLQAAM-PQVSYRMLGRMFWREE 59
MA+T+L+DWCR M VN++R LL+ GIP +CD+AE +E+L+AA+ P + +LG++F E+
Sbjct: 1 MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGKVFREED 60
Query: 60 NAKAALLELTGAVDYAAIPREMPGKGGVWKVLFKPPTSDAEFLE--RLHLFLAREGWTVQ 117
NA AAL+EL V+YA +PRE+PG GG W V+F P S EFL R+ F +EG V+
Sbjct: 61 NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFLGLGRVFHFPEQEGQMVE 120
Query: 118 DVARVLGFQNPTPTPGPEMPAEMLNYILDNVIQPLVESIWYKRLTLFSGRDIPGPGEETF 177
VA LG G + + + +QP VE++ Y+ L +FSGRD P PGEE+F
Sbjct: 121 SVAGALGV-------GLRRVCWLRS--IGQAVQPWVEAVRYQSLGVFSGRDQPAPGEESF 171
Query: 178 DPWLEHTNEVLEEWQ-VSDVEKRRRLMESLRGPAADVIRILKSNNPAITTAECLKALEQV 236
+ WL+HT E+L WQ VS+ E+RRRL+E LRG A ++ L + NPA T +CL AL QV
Sbjct: 172 EVWLDHTTEMLHVWQGVSERERRRRLLEGLRGTALQLVHALLAENPARTAQDCLAALAQV 231
Query: 237 FGSVESSRDAQIKFLNTYQNPGEKLSAYVIRLEPLLQKVVEKGAIDKDNVNQARLEQVIA 296
FG ES ++K L Q GE+LSA+V+RLE LLQK +EK A+ + + ++ RL Q++
Sbjct: 232 FGDNESQATIRVKCLTAQQQSGERLSAFVLRLEVLLQKAMEKEALARASADRVRLRQMLT 291
Query: 297 GANHSGAIRRQLWLTGAGEGPAPNLFQLLVQIREEEAKE 335
A+ + + L G +P+ ++L +RE EA E
Sbjct: 292 RAHLTEPLDEALRKLRMA-GRSPSFLEMLGLVRESEAWE 329
>gi|239746972 PREDICTED: hypothetical protein XP_002343899 [Homo
sapiens]
Length = 399
Score = 258 bits (660), Expect = 4e-69
Identities = 148/339 (43%), Positives = 212/339 (62%), Gaps = 14/339 (4%)
Query: 1 MAMTLLEDWCRGMDVNSQRALLVWGIPVNCDEAEIEETLQAAM-PQVSYRMLGRMFWREE 59
MA+T+L+DWCR M VN++R LL+ GIP +CD+AE +E+L+AA+ P + +LG+ F E+
Sbjct: 1 MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGKAFREED 60
Query: 60 NAKAALLELTGAVDYAAIPREMPGKGGVWKVLFKPPTSDAEFLE--RLHLFLAREGWTVQ 117
NA AAL+EL V+YA +PRE+PG GG W V+F P S EFL R+ F +EG V+
Sbjct: 61 NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFLGLGRVFHFPEQEGQMVE 120
Query: 118 DVARVLGFQNPTPTPGPEMPAEMLNYILDNVIQPLVESIWYKRLTLFSGRDIPGPGEETF 177
VA LG G + + + +QP VE++ + L +FSGRD P PGEE+F
Sbjct: 121 SVAGALGV-------GLRRVCWLRS--IGQAVQPWVEAVRCQSLGVFSGRDQPAPGEESF 171
Query: 178 DPWLEHTNEVLEEWQ-VSDVEKRRRLMESLRGPAADVIRILKSNNPAITTAECLKALEQV 236
+ WL+HT E+L WQ VS+ E+RRRL+E LRG A ++ L + NPA T +CL AL QV
Sbjct: 172 EVWLDHTTEMLHVWQGVSERERRRRLLEGLRGTALQLVHALLAENPARTAQDCLAALAQV 231
Query: 237 FGSVESSRDAQIKFLNTYQNPGEKLSAYVIRLEPLLQKVVEKGAIDKDNVNQARLEQVIA 296
FG ES ++K L Q GE+LSA+V+RLE LLQK +EK A+ + + ++ RL Q++
Sbjct: 232 FGDNESQATIRVKCLTAQQQSGERLSAFVLRLEVLLQKAMEKEALARASADRVRLRQMLT 291
Query: 297 GANHSGAIRRQLWLTGAGEGPAPNLFQLLVQIREEEAKE 335
A+ + + L G +P+ ++L +RE EA E
Sbjct: 292 RAHLTEPLDEALRKLRMA-GRSPSFLEMLGLVRESEAWE 329
>gi|239746970 PREDICTED: hypothetical protein XP_002343898 [Homo
sapiens]
Length = 399
Score = 258 bits (660), Expect = 4e-69
Identities = 148/339 (43%), Positives = 212/339 (62%), Gaps = 14/339 (4%)
Query: 1 MAMTLLEDWCRGMDVNSQRALLVWGIPVNCDEAEIEETLQAAM-PQVSYRMLGRMFWREE 59
MA+T+L+DWCR M VN++R LL+ GIP +CD+AE +E+L+AA+ P + +LG+ F E+
Sbjct: 1 MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGKAFREED 60
Query: 60 NAKAALLELTGAVDYAAIPREMPGKGGVWKVLFKPPTSDAEFLE--RLHLFLAREGWTVQ 117
NA AAL+EL V+YA +PRE+PG GG W V+F P S EFL R+ F +EG V+
Sbjct: 61 NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFLGLGRVFHFPEQEGQMVE 120
Query: 118 DVARVLGFQNPTPTPGPEMPAEMLNYILDNVIQPLVESIWYKRLTLFSGRDIPGPGEETF 177
VA LG G + + + +QP VE++ + L +FSGRD P PGEE+F
Sbjct: 121 SVAGALGV-------GLRRVCWLRS--IGQAVQPWVEAVRCQSLGVFSGRDQPAPGEESF 171
Query: 178 DPWLEHTNEVLEEWQ-VSDVEKRRRLMESLRGPAADVIRILKSNNPAITTAECLKALEQV 236
+ WL+HT E+L WQ VS+ E+RRRL+E LRG A ++ L + NPA T +CL AL QV
Sbjct: 172 EVWLDHTTEMLHVWQGVSERERRRRLLEGLRGTALQLVHALLAENPARTAQDCLAALAQV 231
Query: 237 FGSVESSRDAQIKFLNTYQNPGEKLSAYVIRLEPLLQKVVEKGAIDKDNVNQARLEQVIA 296
FG ES ++K L Q GE+LSA+V+RLE LLQK +EK A+ + + ++ RL Q++
Sbjct: 232 FGDNESQATIRVKCLTAQQQSGERLSAFVLRLEVLLQKAMEKEALARASADRVRLRQMLT 291
Query: 297 GANHSGAIRRQLWLTGAGEGPAPNLFQLLVQIREEEAKE 335
A+ + + L G +P+ ++L +RE EA E
Sbjct: 292 RAHLTEPLDEALRKLRMA-GRSPSFLEMLGLVRESEAWE 329
>gi|169217313 PREDICTED: similar to paraneoplastic antigen MA1 [Homo
sapiens]
Length = 601
Score = 171 bits (433), Expect = 9e-43
Identities = 114/335 (34%), Positives = 177/335 (52%), Gaps = 55/335 (16%)
Query: 1 MAMTLLEDWCRGMDVNSQRALLVWGIPVNCDEAEIEETLQAAM-PQVSYRMLGRMFWREE 59
+A+ +L+DWCR M VN++R+LL+ IP +C+E E +E ++AA+ P YR+L ++F +E
Sbjct: 191 IALAMLQDWCRRMGVNAERSLLILDIPDDCEEHEFQEAVRAALSPLGRYRVLIKVFRKEL 250
Query: 60 NAKAALLELTGAVDYAAIPREMPGKGGVWKVLFKPPTSDAEFLERLHLFLAREGWTVQDV 119
A+AAL+E ++ + I
Sbjct: 251 GARAALVEFAEGLNQSLI------------------------------------------ 268
Query: 120 ARVLGFQNPTPTPGPEMPAEMLNYILDNVIQPLVESIWYKRLTLFSGRDIPGPGEETFDP 179
P G P ++++ L ++PLV+++ Y+ L FSGR+ PG EE+F+
Sbjct: 269 --------PRQIAGKGGPWKVIS--LPQTLRPLVKTMAYRELRPFSGREQPGCVEESFES 318
Query: 180 WLEHTNEVLEEW-QVSDVEKRRRLMESLRGPAADVIRILKSNNPAITTAECLKALEQVFG 238
WLE ++L+ W S+ E+RRRL++SL G A D++ L +P + +CL AL QVF
Sbjct: 319 WLEDAKDMLQLWCHASERERRRRLLDSLDGLALDIVSGLLEEDPDFSAQDCLTALGQVFR 378
Query: 239 SVESSRDAQIKFLNTYQNPGEKLSAYVIRLEPLLQKVVEKGAIDKDNVNQARLEQVIAGA 298
S ++ +++KFL Q P E L A+V+RLE LLQK VEKGA+ N RL QV++ A
Sbjct: 379 SRDTWMTSRMKFLTCTQGPQEGLFAFVVRLEGLLQKAVEKGAVHPAMANHLRLRQVLSRA 438
Query: 299 NHSGAIRRQLWLTGAGEGPAPNLFQLLVQIREEEA 333
S A++ L P P+ +LL IR+ EA
Sbjct: 439 RPSEALQDTLRRMQLERRP-PDFLRLLRLIRDMEA 472
>gi|169216516 PREDICTED: similar to paraneoplastic antigen MA1 [Homo
sapiens]
Length = 541
Score = 171 bits (433), Expect = 9e-43
Identities = 114/335 (34%), Positives = 177/335 (52%), Gaps = 55/335 (16%)
Query: 1 MAMTLLEDWCRGMDVNSQRALLVWGIPVNCDEAEIEETLQAAM-PQVSYRMLGRMFWREE 59
+A+ +L+DWCR M VN++R+LL+ IP +C+E E +E ++AA+ P YR+L ++F +E
Sbjct: 131 IALAMLQDWCRRMGVNAERSLLILDIPDDCEEHEFQEAVRAALSPLGRYRVLIKVFRKEL 190
Query: 60 NAKAALLELTGAVDYAAIPREMPGKGGVWKVLFKPPTSDAEFLERLHLFLAREGWTVQDV 119
A+AAL+E ++ + I
Sbjct: 191 GARAALVEFAEGLNQSLI------------------------------------------ 208
Query: 120 ARVLGFQNPTPTPGPEMPAEMLNYILDNVIQPLVESIWYKRLTLFSGRDIPGPGEETFDP 179
P G P ++++ L ++PLV+++ Y+ L FSGR+ PG EE+F+
Sbjct: 209 --------PRQIAGKGGPWKVIS--LPQTLRPLVKTMAYRELRPFSGREQPGCVEESFES 258
Query: 180 WLEHTNEVLEEW-QVSDVEKRRRLMESLRGPAADVIRILKSNNPAITTAECLKALEQVFG 238
WLE ++L+ W S+ E+RRRL++SL G A D++ L +P + +CL AL QVF
Sbjct: 259 WLEDAKDMLQLWCHASERERRRRLLDSLDGLALDIVSGLLEEDPDFSAQDCLTALGQVFR 318
Query: 239 SVESSRDAQIKFLNTYQNPGEKLSAYVIRLEPLLQKVVEKGAIDKDNVNQARLEQVIAGA 298
S ++ +++KFL Q P E L A+V+RLE LLQK VEKGA+ N RL QV++ A
Sbjct: 319 SRDTWMTSRMKFLTCTQGPQEGLFAFVVRLEGLLQKAVEKGAVHPAMANHLRLRQVLSRA 378
Query: 299 NHSGAIRRQLWLTGAGEGPAPNLFQLLVQIREEEA 333
S A++ L P P+ +LL IR+ EA
Sbjct: 379 RPSEALQDTLRRMQLERRP-PDFLRLLRLIRDMEA 412
>gi|239746976 PREDICTED: similar to paraneoplastic antigen MA1 [Homo
sapiens]
Length = 601
Score = 171 bits (433), Expect = 9e-43
Identities = 114/335 (34%), Positives = 177/335 (52%), Gaps = 55/335 (16%)
Query: 1 MAMTLLEDWCRGMDVNSQRALLVWGIPVNCDEAEIEETLQAAM-PQVSYRMLGRMFWREE 59
+A+ +L+DWCR M VN++R+LL+ IP +C+E E +E ++AA+ P YR+L ++F +E
Sbjct: 191 IALAMLQDWCRRMGVNAERSLLILDIPDDCEEHEFQEAVRAALSPLGRYRVLIKVFRKEL 250
Query: 60 NAKAALLELTGAVDYAAIPREMPGKGGVWKVLFKPPTSDAEFLERLHLFLAREGWTVQDV 119
A+AAL+E ++ + I
Sbjct: 251 GARAALVEFAEGLNQSLI------------------------------------------ 268
Query: 120 ARVLGFQNPTPTPGPEMPAEMLNYILDNVIQPLVESIWYKRLTLFSGRDIPGPGEETFDP 179
P G P ++++ L ++PLV+++ Y+ L FSGR+ PG EE+F+
Sbjct: 269 --------PRQIAGKGGPWKVIS--LPQTLRPLVKTMAYRELRPFSGREQPGCVEESFES 318
Query: 180 WLEHTNEVLEEW-QVSDVEKRRRLMESLRGPAADVIRILKSNNPAITTAECLKALEQVFG 238
WLE ++L+ W S+ E+RRRL++SL G A D++ L +P + +CL AL QVF
Sbjct: 319 WLEDAKDMLQLWCHASERERRRRLLDSLDGLALDIVSGLLEEDPDFSAQDCLTALGQVFR 378
Query: 239 SVESSRDAQIKFLNTYQNPGEKLSAYVIRLEPLLQKVVEKGAIDKDNVNQARLEQVIAGA 298
S ++ +++KFL Q P E L A+V+RLE LLQK VEKGA+ N RL QV++ A
Sbjct: 379 SRDTWMTSRMKFLTCTQGPQEGLFAFVVRLEGLLQKAVEKGAVHPAMANHLRLRQVLSRA 438
Query: 299 NHSGAIRRQLWLTGAGEGPAPNLFQLLVQIREEEA 333
S A++ L P P+ +LL IR+ EA
Sbjct: 439 RPSEALQDTLRRMQLERRP-PDFLRLLRLIRDMEA 472
>gi|169216507 PREDICTED: similar to hCG1645335 [Homo sapiens]
Length = 409
Score = 166 bits (420), Expect = 3e-41
Identities = 117/335 (34%), Positives = 174/335 (51%), Gaps = 58/335 (17%)
Query: 1 MAMTLLEDWCRGMDVNSQRALLVWGIPVNCDEAEIEETLQAAM-PQVSYRMLGRMFWREE 59
MA+ +L DWCR M N++R+LL+ GIP +C E E +E ++AA+ P YR+L + F +E
Sbjct: 1 MALAMLRDWCRWMGANAERSLLILGIPDDCKEHEFQEAVRAALSPLGRYRVLTKHFRKEL 60
Query: 60 NAKAALLELTGAVDYAAIPREMPGKGGVWKVLFKPPTSDAEFLERLHLFLAREGWTVQDV 119
AKAAL+E AE+L R +
Sbjct: 61 GAKAALVEF------------------------------AEYLNRSLI------------ 78
Query: 120 ARVLGFQNPTPTPGPEMPAEMLNYILDNVIQPLVESIWYKRLTLFSGRDIPGPGEETFDP 179
P PG P +++ + QP++E+ Y+ L FS R+ PG EE+F+
Sbjct: 79 --------PHQIPGNGGPWKVIF-----LPQPVLENRAYRELRPFSRREQPGCEEESFES 125
Query: 180 WLEHTNEVLEEW-QVSDVEKRRRLMESLRGPAADVIRILKSNNPAITTAECLKALEQVFG 238
W+EH ++L+ W S+ EK+R L+ESL GPA +V+ L + ++ +CL AL QVF
Sbjct: 126 WVEHAKDMLQLWCHASEREKKRWLLESLGGPALEVVSGLLEEDTNLSALDCLAALGQVFR 185
Query: 239 SVESSRDAQIKFLNTYQNPGEKLSAYVIRLEPLLQKVVEKGAIDKDNVNQARLEQVIAGA 298
+ ++ +++KFL Q P E L A+V+RLE LLQ+ VEKGA+ N RL+QV++ A
Sbjct: 186 NQDTRMTSRLKFLTCTQGPQEGLFAFVVRLEGLLQRAVEKGAVCPALANYLRLQQVLSWA 245
Query: 299 NHSGAIRRQLWLTGAGEGPAPNLFQLLVQIREEEA 333
S A++ L + P P LL IRE EA
Sbjct: 246 RPSEALQDTLRGMQLEKRP-PGFLGLLRLIREMEA 279
>gi|169216732 PREDICTED: similar to hCG1645335 [Homo sapiens]
Length = 409
Score = 166 bits (420), Expect = 3e-41
Identities = 117/335 (34%), Positives = 174/335 (51%), Gaps = 58/335 (17%)
Query: 1 MAMTLLEDWCRGMDVNSQRALLVWGIPVNCDEAEIEETLQAAM-PQVSYRMLGRMFWREE 59
MA+ +L DWCR M N++R+LL+ GIP +C E E +E ++AA+ P YR+L + F +E
Sbjct: 1 MALAMLRDWCRWMGANAERSLLILGIPDDCKEHEFQEAVRAALSPLGRYRVLTKHFRKEL 60
Query: 60 NAKAALLELTGAVDYAAIPREMPGKGGVWKVLFKPPTSDAEFLERLHLFLAREGWTVQDV 119
AKAAL+E AE+L R +
Sbjct: 61 GAKAALVEF------------------------------AEYLNRSLI------------ 78
Query: 120 ARVLGFQNPTPTPGPEMPAEMLNYILDNVIQPLVESIWYKRLTLFSGRDIPGPGEETFDP 179
P PG P +++ + QP++E+ Y+ L FS R+ PG EE+F+
Sbjct: 79 --------PHQIPGNGGPWKVIF-----LPQPVLENRAYRELRPFSRREQPGCEEESFES 125
Query: 180 WLEHTNEVLEEW-QVSDVEKRRRLMESLRGPAADVIRILKSNNPAITTAECLKALEQVFG 238
W+EH ++L+ W S+ EK+R L+ESL GPA +V+ L + ++ +CL AL QVF
Sbjct: 126 WVEHAKDMLQLWCHASEREKKRWLLESLGGPALEVVSGLLEEDTNLSALDCLAALGQVFR 185
Query: 239 SVESSRDAQIKFLNTYQNPGEKLSAYVIRLEPLLQKVVEKGAIDKDNVNQARLEQVIAGA 298
+ ++ +++KFL Q P E L A+V+RLE LLQ+ VEKGA+ N RL+QV++ A
Sbjct: 186 NQDTRMTSRLKFLTCTQGPQEGLFAFVVRLEGLLQRAVEKGAVCPALANYLRLQQVLSWA 245
Query: 299 NHSGAIRRQLWLTGAGEGPAPNLFQLLVQIREEEA 333
S A++ L + P P LL IRE EA
Sbjct: 246 RPSEALQDTLRGMQLEKRP-PGFLGLLRLIREMEA 279
>gi|156766054 PNMA-like 1 isoform b [Homo sapiens]
Length = 378
Score = 151 bits (382), Expect = 7e-37
Identities = 81/155 (52%), Positives = 106/155 (68%), Gaps = 5/155 (3%)
Query: 1 MAMTLLEDWCRGMDVNSQRALLVWGIPVNCDEAEIEETLQAAM-PQVSYRMLGRMFWREE 59
MAM LLEDWCRGM+V+ R+LLV GIP +C +AEIEETL + P YR+L ++F REE
Sbjct: 5 MAMNLLEDWCRGMEVDIHRSLLVTGIPEDCGQAEIEETLNGVLSPLGPYRVLNKIFVREE 64
Query: 60 NAKAALLELTGAVDYAAIPREMPGKGGVWKVLFKPPTSDAEFLERLHLFLAREGWTVQDV 119
N KAAL+E+ V+ + IPRE PG+GGVW+V+ + PT DAEFL+ L+ FL EG T +DV
Sbjct: 65 NVKAALIEVGEGVNLSTIPREFPGRGGVWRVVCRDPTQDAEFLKNLNEFLDAEGRTWEDV 124
Query: 120 ARVLGFQNPTPTPG----PEMPAEMLNYILDNVIQ 150
R+L +PT + PE AE L +L V+Q
Sbjct: 125 VRLLQLNHPTLSQNQHQPPENWAEALGVLLGAVVQ 159
>gi|39780597 PNMA-like 1 isoform a [Homo sapiens]
Length = 439
Score = 151 bits (382), Expect = 7e-37
Identities = 81/155 (52%), Positives = 106/155 (68%), Gaps = 5/155 (3%)
Query: 1 MAMTLLEDWCRGMDVNSQRALLVWGIPVNCDEAEIEETLQAAM-PQVSYRMLGRMFWREE 59
MAM LLEDWCRGM+V+ R+LLV GIP +C +AEIEETL + P YR+L ++F REE
Sbjct: 5 MAMNLLEDWCRGMEVDIHRSLLVTGIPEDCGQAEIEETLNGVLSPLGPYRVLNKIFVREE 64
Query: 60 NAKAALLELTGAVDYAAIPREMPGKGGVWKVLFKPPTSDAEFLERLHLFLAREGWTVQDV 119
N KAAL+E+ V+ + IPRE PG+GGVW+V+ + PT DAEFL+ L+ FL EG T +DV
Sbjct: 65 NVKAALIEVGEGVNLSTIPREFPGRGGVWRVVCRDPTQDAEFLKNLNEFLDAEGRTWEDV 124
Query: 120 ARVLGFQNPTPTPG----PEMPAEMLNYILDNVIQ 150
R+L +PT + PE AE L +L V+Q
Sbjct: 125 VRLLQLNHPTLSQNQHQPPENWAEALGVLLGAVVQ 159
>gi|221136806 zinc finger, CCHC domain containing 18 [Homo sapiens]
Length = 403
Score = 151 bits (381), Expect = 1e-36
Identities = 87/218 (39%), Positives = 127/218 (58%), Gaps = 5/218 (2%)
Query: 119 VARVLGFQNPTPTPGPEMPAEMLNYILDNVIQPLVESIWYKRLTLFSGRDIPGPGEETFD 178
+ +G P P ML L + PLV + + + LFSGR +P G+ETF+
Sbjct: 4 ITACVGNSRQQNAPLPPWAHSMLRS-LGRSLCPLVVKMAERNMKLFSGRVVPAQGKETFE 62
Query: 179 PWLEHTNEVLEEWQVSDVEKRRRLMESLRGPAADVIRILKSNNPAITTAECLKALEQVFG 238
WL NEVL +W +S+ EK +RLM++LRGPA +V+R+L++ NP ++ A+ L+A++ VFG
Sbjct: 63 NWLIQVNEVLPDWSMSEEEKLKRLMKTLRGPAREVMRLLQAANPNLSVADFLRAMKLVFG 122
Query: 239 SVESSRDAQIKFLNTYQNPGEKLSAYVIRLEPLLQKVVEKGAIDKDNVNQARLEQVIAGA 298
ESS A KF NT Q GEK S YVIRLE LQ ++ G + + + NQ RL+Q++ GA
Sbjct: 123 ESESSVTAHGKFFNTLQAQGEKASLYVIRLEVQLQNAIQAGILAEKDANQTRLQQLLLGA 182
Query: 299 NHSGAIR----RQLWLTGAGEGPAPNLFQLLVQIREEE 332
+ +R L + + PN +L+ IREEE
Sbjct: 183 ELNRDLRFRLKHLLRMYANKQERLPNFLELIKMIREEE 220
>gi|28557790 zinc finger, CCHC domain containing 12 [Homo sapiens]
Length = 402
Score = 150 bits (380), Expect = 1e-36
Identities = 88/218 (40%), Positives = 129/218 (59%), Gaps = 6/218 (2%)
Query: 119 VARVLGFQNPTPTPGPEMPAEMLNYILDNVIQPLVESIWYKRLTLFSGRDIPGPGEETFD 178
+ARV G P P ML L + P++ S+ + + LFSGR +P GEETF+
Sbjct: 5 IARV-GNSRRLNAPLPPWAHSMLRS-LGRSLGPIMASMADRNMKLFSGRVVPAQGEETFE 62
Query: 179 PWLEHTNEVLEEWQVSDVEKRRRLMESLRGPAADVIRILKSNNPAITTAECLKALEQVFG 238
WL N VL +W +S+ EK +RLM++LRGPA +V+R+L++ NP ++ A+ L+A++ VFG
Sbjct: 63 NWLTQVNGVLPDWNMSEEEKLKRLMKTLRGPAREVMRVLQATNPNLSVADFLRAMKLVFG 122
Query: 239 SVESSRDAQIKFLNTYQNPGEKLSAYVIRLEPLLQKVVEKGAIDKDNVNQARLEQVIAGA 298
ESS A KF NT Q GEK S YVIRLE LQ ++ G I + + N+ RL+Q++ G
Sbjct: 123 ESESSVTAHGKFFNTLQAQGEKASLYVIRLEVQLQNAIQAGIIAEKDANRTRLQQLLLGG 182
Query: 299 NHSGAIRRQ----LWLTGAGEGPAPNLFQLLVQIREEE 332
S +R + L + + PN +L+ +REEE
Sbjct: 183 ELSRDLRLRLKDFLRMYANEQERLPNFLELIRMVREEE 220
>gi|146219841 PNMA-like 2 [Homo sapiens]
Length = 635
Score = 104 bits (260), Expect = 1e-22
Identities = 60/140 (42%), Positives = 85/140 (60%), Gaps = 3/140 (2%)
Query: 1 MAMTLLEDWCRGMDVNSQRALLVWGIPVNCDEAEIEETLQAAM-PQVSYRMLGRMFWREE 59
MAM+LL+DWCR +DV++ RALLV GIP ++A++E LQ + P ++R+ E
Sbjct: 1 MAMSLLQDWCRSLDVDAHRALLVTGIPEGLEQADVEAVLQPTLLPLGTFRLRHMKALMNE 60
Query: 60 NAKAALLELTGAVDYAAIPREMPGKGGVWKVLFKPPTSDAEFLERLHLFLAREGWTVQDV 119
A+AAL+E V++AAIPRE+PGK GVW+VL+K D L ++ L +G T
Sbjct: 61 KAQAALVEFVEDVNHAAIPREIPGKDGVWRVLWKDRAQDTRVLRQMRRLLLDDGPTQAAE 120
Query: 120 ARVLGFQNPTPTPGPEMPAE 139
A G + PTP P E A+
Sbjct: 121 AGTPG-EAPTP-PASETQAQ 138
>gi|169216514 PREDICTED: similar to paraneoplastic antigen MA2 [Homo
sapiens]
Length = 340
Score = 97.4 bits (241), Expect = 2e-20
Identities = 47/102 (46%), Positives = 71/102 (69%), Gaps = 1/102 (0%)
Query: 1 MAMTLLEDWCRGMDVNSQRALLVWGIPVNCDEAEIEETLQAAM-PQVSYRMLGRMFWREE 59
MA+ +L DWCR M VN++R+LL+ IP +C+E E +E ++AA+ P YR+L ++F +E
Sbjct: 1 MALAMLRDWCRRMGVNAERSLLILDIPDDCEEHEFQEAVRAALSPLGRYRVLIKVFRKEL 60
Query: 60 NAKAALLELTGAVDYAAIPREMPGKGGVWKVLFKPPTSDAEF 101
A+AAL+E ++ + IPR++ GKGG WKV+ P DAEF
Sbjct: 61 GARAALVEFAEGLNQSLIPRQIAGKGGPWKVISLPQALDAEF 102
Score = 75.1 bits (183), Expect = 9e-14
Identities = 40/111 (36%), Positives = 66/111 (59%), Gaps = 8/111 (7%)
Query: 149 IQPLVESIWYKRLTLFSGRDIPGPGEETFDPWLEHTNEVLEEW-QVSDVEKRRRLMESLR 207
+Q ++E+ Y+ L FSGR+ PG EE+F+ W+EH ++L+ W S+ E++R L+ESL
Sbjct: 229 LQAVLENRAYQELRPFSGREQPGCEEESFESWMEHAKDMLQLWYHASERERKRWLLESLG 288
Query: 208 GPAADVIRILKSNNPAITTAECLKALE-------QVFGSVESSRDAQIKFL 251
GPA DV+ L +P + +C L+ Q FG+ + +++KFL
Sbjct: 289 GPALDVVSGLLEEDPNLAALDCQVLLDCWAAVLGQAFGNRDPRMTSRLKFL 339
>gi|169216749 PREDICTED: similar to Putative paraneoplastic
antigen-like protein 6B-like protein [Homo sapiens]
Length = 340
Score = 97.4 bits (241), Expect = 2e-20
Identities = 47/102 (46%), Positives = 71/102 (69%), Gaps = 1/102 (0%)
Query: 1 MAMTLLEDWCRGMDVNSQRALLVWGIPVNCDEAEIEETLQAAM-PQVSYRMLGRMFWREE 59
MA+ +L DWCR M VN++R+LL+ IP +C+E E +E ++AA+ P YR+L ++F +E
Sbjct: 1 MALAMLRDWCRRMGVNAERSLLILDIPDDCEEHEFQEAVRAALSPLGRYRVLIKVFRKEL 60
Query: 60 NAKAALLELTGAVDYAAIPREMPGKGGVWKVLFKPPTSDAEF 101
A+AAL+E ++ + IPR++ GKGG WKV+ P DAEF
Sbjct: 61 GARAALVEFAEGLNQSLIPRQIAGKGGPWKVISLPQALDAEF 102
Score = 75.1 bits (183), Expect = 9e-14
Identities = 40/111 (36%), Positives = 66/111 (59%), Gaps = 8/111 (7%)
Query: 149 IQPLVESIWYKRLTLFSGRDIPGPGEETFDPWLEHTNEVLEEW-QVSDVEKRRRLMESLR 207
+Q ++E+ Y+ L FSGR+ PG EE+F+ W+EH ++L+ W S+ E++R L+ESL
Sbjct: 229 LQAVLENRAYQELRPFSGREQPGCKEESFESWMEHAKDMLQLWYHASERERKRWLLESLG 288
Query: 208 GPAADVIRILKSNNPAITTAECLKALE-------QVFGSVESSRDAQIKFL 251
GPA DV+ L +P + +C L+ Q FG+ + +++KFL
Sbjct: 289 GPALDVVSGLLEEDPNLAALDCQVLLDCWAAVLGQAFGNRDPRMTSRLKFL 339
>gi|199559779 coiled-coil domain containing 8 [Homo sapiens]
Length = 538
Score = 73.2 bits (178), Expect = 3e-13
Identities = 36/75 (48%), Positives = 48/75 (64%)
Query: 65 LLELTGAVDYAAIPREMPGKGGVWKVLFKPPTSDAEFLERLHLFLAREGWTVQDVARVLG 124
+L++ VDY IPRE+ GGVW+V+ KP T +AEF ERL FL EG T++DVAR++
Sbjct: 1 MLQIGEDVDYLLIPREVRLAGGVWRVISKPATKEAEFRERLTQFLEEEGRTLEDVARIME 60
Query: 125 FQNPTPTPGPEMPAE 139
P P P+ P E
Sbjct: 61 KSTPHPPQPPKKPKE 75
>gi|7661892 REST corepressor 1 [Homo sapiens]
Length = 482
Score = 34.7 bits (78), Expect = 0.13
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 21 LLVWGIPVNCDEAEIEETLQAAMPQVSYRM---LGRMFWREENAKAALLEL 68
+LVW N EA+++E + A + Y M LG +FW + N + +L +L
Sbjct: 132 MLVWSPNQNLSEAKLDEYIAIAKEKHGYNMEQALGMLFWHKHNIEKSLADL 182
>gi|219803769 trichoplein [Homo sapiens]
Length = 498
Score = 32.7 bits (73), Expect = 0.50
Identities = 46/162 (28%), Positives = 66/162 (40%), Gaps = 39/162 (24%)
Query: 182 EHTNEVLEEWQVSDVEKRRRLMESLRGPAADVIRILKSNNPAITTAECLKALEQVFGSVE 241
E N + + W++ +E+ R+ ME+ R AE + L + +
Sbjct: 240 EQENLLKQRWELERLEEERKQMEAFR-----------------QKAELGRFLRHQYNAQL 282
Query: 242 SSRDAQIKFLNTYQNPGEKLSAYVIRLEPLLQKVVEKGAIDKDNVNQARLEQVIAG-ANH 300
S R QI+ E+L A L+ LL+K E ++ AR EQV+A A
Sbjct: 283 SRRTQQIQ---------EELEADRRILQALLEKEDE-----SQRLHLARREQVMADVAWM 328
Query: 301 SGAIRRQLWLTGAGEGPAPNLFQLLVQIREEEAKEEEEEAEA 342
AI QL L A E L + EEAKE E+ EA
Sbjct: 329 KQAIEEQLQLERAREAE-------LQMLLREEAKEMWEKREA 363
>gi|14150056 trichoplein [Homo sapiens]
Length = 498
Score = 32.7 bits (73), Expect = 0.50
Identities = 46/162 (28%), Positives = 66/162 (40%), Gaps = 39/162 (24%)
Query: 182 EHTNEVLEEWQVSDVEKRRRLMESLRGPAADVIRILKSNNPAITTAECLKALEQVFGSVE 241
E N + + W++ +E+ R+ ME+ R AE + L + +
Sbjct: 240 EQENLLKQRWELERLEEERKQMEAFR-----------------QKAELGRFLRHQYNAQL 282
Query: 242 SSRDAQIKFLNTYQNPGEKLSAYVIRLEPLLQKVVEKGAIDKDNVNQARLEQVIAG-ANH 300
S R QI+ E+L A L+ LL+K E ++ AR EQV+A A
Sbjct: 283 SRRTQQIQ---------EELEADRRILQALLEKEDE-----SQRLHLARREQVMADVAWM 328
Query: 301 SGAIRRQLWLTGAGEGPAPNLFQLLVQIREEEAKEEEEEAEA 342
AI QL L A E L + EEAKE E+ EA
Sbjct: 329 KQAIEEQLQLERAREAE-------LQMLLREEAKEMWEKREA 363
>gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo
sapiens]
Length = 1938
Score = 31.6 bits (70), Expect = 1.1
Identities = 39/165 (23%), Positives = 72/165 (43%), Gaps = 19/165 (11%)
Query: 186 EVLEEWQVS--DVEKRRRLMESLRGPAADVIRILKSNNPAITT------AECLKALEQVF 237
E LEE +V+ E+ RRL E A+D +++L S N ++ A+ + +V
Sbjct: 1687 EELEEMKVALEQTERTRRLSEQELLDASDRVQLLHSQNTSLINTKKKLEADIAQCQAEVE 1746
Query: 238 GSVESSRDAQIKFLNTYQNPGEKLSAYVIRLEPLLQKVVEKGAIDKDNVNQARLEQVIAG 297
S++ SR+A+ + + ++ + E L ++ +++ N LEQ +
Sbjct: 1747 NSIQESRNAE-------EKAKKAITDAAMMAEELKKEQDTSAHLERMKKN---LEQTVKD 1796
Query: 298 ANHSGAIRRQLWLTGAGEGPAPNLFQLLVQIREEEAKEEEEEAEA 342
H QL L G G+ L + ++ E E++ AEA
Sbjct: 1797 LQHRLDEAEQLALKG-GKKQIQKLENRVRELENELDVEQKRGAEA 1840
>gi|114688046 TBC1 domain family, member 4 [Homo sapiens]
Length = 1298
Score = 31.2 bits (69), Expect = 1.5
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 4/100 (4%)
Query: 139 EMLNYILDNVIQP-LVESIWYKRLTLFSGRDIPGPGEETFDPWLEHTNEVLEEWQVSDVE 197
++ N++ +N I P L + W+ LTLF+ + G FD EV+ + +S +
Sbjct: 1068 DLYNHLEENEISPSLYAAPWF--LTLFASQFSLGFVARVFDIIFLQGTEVIFKVALSLLS 1125
Query: 198 KRRRLMESLRGPAADVIRILKSNNPAITTAECLKALEQVF 237
+ L+ +++ LK+ P + T+E K + QVF
Sbjct: 1126 SQETLIMECES-FENIVEFLKNTLPDMNTSEMEKIITQVF 1164
>gi|114155146 tropomyosin 3 isoform 3 [Homo sapiens]
Length = 247
Score = 30.8 bits (68), Expect = 1.9
Identities = 22/91 (24%), Positives = 38/91 (41%), Gaps = 6/91 (6%)
Query: 187 VLEEWQVSDVEKRRRLMESLRGPAADVIRILKSNNPAITTAECLKALEQVFGSVESSRDA 246
V+ E + E+R L ES + IR++ N +CL A E+ + E +
Sbjct: 134 VIIEGDLERTEERAELAESRCREMDEQIRLMDQN------LKCLSAAEEKYSQKEDKYEE 187
Query: 247 QIKFLNTYQNPGEKLSAYVIRLEPLLQKVVE 277
+IK L E + + R L+K ++
Sbjct: 188 EIKILTDKLKEAETRAEFAERSVAKLEKTID 218
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.135 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,454,328
Number of Sequences: 37866
Number of extensions: 682912
Number of successful extensions: 3489
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 3381
Number of HSP's gapped (non-prelim): 73
length of query: 353
length of database: 18,247,518
effective HSP length: 103
effective length of query: 250
effective length of database: 14,347,320
effective search space: 3586830000
effective search space used: 3586830000
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.