Guide to the Human Genome
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Name: NRARP Sequence: fasta or formatted (114aa) NCBI GI: 51972284
Description:

NOTCH-regulated ankyrin repeat protein

Referenced in:

Serine / Threonine Protein Phosphatases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.5         12           2
 C cysteine            1.8          2           1
 D aspartate           3.5          4           1
 E glutamate           5.3          6           1
 F phenylalanine       4.4          5           1
 G glycine             7.9          9           2
 H histidine           2.6          3           1
 I isoleucine          5.3          6           1
 K lysine              4.4          5           1
 L leucine            11.4         13           2
 M methionine          1.8          2           1
 N asparagine          6.1          7           1
 P proline             1.8          2           1
 Q glutamine           8.8         10           1
 R arginine            4.4          5           1
 S serine              7.0          8           1
 T threonine           5.3          6           1
 V valine              5.3          6           1
 W tryptophan          0.9          1           1
 Y tyrosine            1.8          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   NOTCH-regulated ankyrin repeat protein 
DYSFIP1               0.232   dysferlin-interacting protein 1 
PPP1R12A              0.192   protein phosphatase 1, regulatory (inhibitor) subun...
PPP1R12A              0.192   protein phosphatase 1, regulatory (inhibitor) subunit...
PPP1R12B              0.182   protein phosphatase 1, regulatory (inhibitor) subuni...
PPP1R12B              0.182   protein phosphatase 1, regulatory (inhibitor) subunit...
PPP1R12C              0.177   protein phosphatase 1, regulatory subunit 12C 
ANKRD50               0.148   ankyrin repeat domain 50 
FEM1C                 0.148   feminization 1 homolog a 
TP53BP2               0.143   tumor protein p53 binding protein, 2 isoform 1 [Hom...
TP53BP2               0.143   tumor protein p53 binding protein, 2 isoform 2 
ANK2                  0.138   ankyrin 2 isoform 3 
ANK2                  0.138   ankyrin 2 isoform 2 
ANK2                  0.138   ankyrin 2 isoform 1 
ANK1                  0.138   ankyrin 1 isoform 9 
ANK1                  0.138   ankyrin 1 isoform 1 
ANK1                  0.138   ankyrin 1 isoform 3 
ANK1                  0.138   ankyrin 1 isoform 2 
ANK1                  0.138   ankyrin 1 isoform 4 
ANK3                  0.133   ankyrin 3 isoform 1 
ANKDD1B               0.133   PREDICTED: ankyrin repeat and death domain containi...
ANKDD1B               0.133   PREDICTED: ankyrin repeat and death domain containi...
ANKDD1B               0.133   PREDICTED: ankyrin repeat and death domain containi...
PPP1R16B              0.133   protein phosphatase 1 regulatory inhibitor subunit 1...
ANKRD31               0.133   PREDICTED: ankyrin repeat domain 31 
ANKRD31               0.133   PREDICTED: ankyrin repeat domain 31 
ANKRD31               0.133   PREDICTED: ankyrin repeat domain 31 
ANKRD13A              0.133   ankyrin repeat domain 13 
ANKRD44               0.123   ankyrin repeat domain 44 
ZDHHC17               0.123   huntingtin interacting protein 14 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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