BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|13376886 alanyl-tRNA synthetase domain containing 1 isoform 2 [Homo sapiens] (525 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|13376886 alanyl-tRNA synthetase domain containing 1 isoform 2... 1057 0.0 gi|217416402 alanyl-tRNA synthetase domain containing 1 isoform ... 1057 0.0 gi|217416407 alanyl-tRNA synthetase domain containing 1 isoform ... 221 1e-57 gi|217416405 alanyl-tRNA synthetase domain containing 1 isoform ... 183 4e-46 gi|23308579 prostaglandin-E synthase 3 [Homo sapiens] 109 7e-24 gi|38569417 alanyl-tRNA synthetase 2, mitochondrial [Homo sapiens] 62 2e-09 gi|109148542 alanyl-tRNA synthetase [Homo sapiens] 49 1e-05 gi|239750861 PREDICTED: hypothetical protein XP_002347581 [Homo ... 43 6e-04 gi|117168248 protein tyrosine phosphatase-like A domain containi... 43 6e-04 gi|30425444 ankyrin repeat and kinase domain containing 1 [Homo ... 32 1.1 gi|239582735 radial spoke head 4 homolog A isoform 2 [Homo sapiens] 32 1.9 gi|58219006 radial spoke head 4 homolog A isoform 1 [Homo sapiens] 32 1.9 gi|48928056 heat shock protein 70kDa family member 13 precursor ... 29 9.2 >gi|13376886 alanyl-tRNA synthetase domain containing 1 isoform 2 [Homo sapiens] Length = 525 Score = 1057 bits (2734), Expect = 0.0 Identities = 525/525 (100%), Positives = 525/525 (100%) Query: 1 MEFCVEDSTDVHVLIEDHRIVFSCKNADGVELYNEIEFYAKVNSKDSQDKRSSRSITCFV 60 MEFCVEDSTDVHVLIEDHRIVFSCKNADGVELYNEIEFYAKVNSKDSQDKRSSRSITCFV Sbjct: 1 MEFCVEDSTDVHVLIEDHRIVFSCKNADGVELYNEIEFYAKVNSKDSQDKRSSRSITCFV 60 Query: 61 RKWKEKVAWPRLTKEDIKPVWLSVDFDNWRDWEGDEEMELAHVEHYAELLKKVSTKRPPP 120 RKWKEKVAWPRLTKEDIKPVWLSVDFDNWRDWEGDEEMELAHVEHYAELLKKVSTKRPPP Sbjct: 61 RKWKEKVAWPRLTKEDIKPVWLSVDFDNWRDWEGDEEMELAHVEHYAELLKKVSTKRPPP 120 Query: 121 AMDDLDFTTTVVSCCPAELQTEGSNGKKEVLSGFQVVLEDTVLFPEGGGQPDDRGTINDI 180 AMDDLDFTTTVVSCCPAELQTEGSNGKKEVLSGFQVVLEDTVLFPEGGGQPDDRGTINDI Sbjct: 121 AMDDLDFTTTVVSCCPAELQTEGSNGKKEVLSGFQVVLEDTVLFPEGGGQPDDRGTINDI 180 Query: 181 SVLRVTRRGEQADHFTQTPLDPGSQVLVRVDWERRFDHMQQHSGQHLITAVADHLFKLKT 240 SVLRVTRRGEQADHFTQTPLDPGSQVLVRVDWERRFDHMQQHSGQHLITAVADHLFKLKT Sbjct: 181 SVLRVTRRGEQADHFTQTPLDPGSQVLVRVDWERRFDHMQQHSGQHLITAVADHLFKLKT 240 Query: 241 TSWELGRFRSAIELDTPSMTAEQVAAIEQSVNEKIRDRLPVNVRELSLDDPEVEQVSGRG 300 TSWELGRFRSAIELDTPSMTAEQVAAIEQSVNEKIRDRLPVNVRELSLDDPEVEQVSGRG Sbjct: 241 TSWELGRFRSAIELDTPSMTAEQVAAIEQSVNEKIRDRLPVNVRELSLDDPEVEQVSGRG 300 Query: 301 LPDDHAGPIRVVNIEGVDSNMCCGTHVSNLSDLQVIKILGTEKGKKNRTNLIFLSGNRVL 360 LPDDHAGPIRVVNIEGVDSNMCCGTHVSNLSDLQVIKILGTEKGKKNRTNLIFLSGNRVL Sbjct: 301 LPDDHAGPIRVVNIEGVDSNMCCGTHVSNLSDLQVIKILGTEKGKKNRTNLIFLSGNRVL 360 Query: 361 KWMERSHGTEKALTALLKCGAEDHVEAVKKLQNSTKILQKNNLNLLRDLAVHIAHSLRNS 420 KWMERSHGTEKALTALLKCGAEDHVEAVKKLQNSTKILQKNNLNLLRDLAVHIAHSLRNS Sbjct: 361 KWMERSHGTEKALTALLKCGAEDHVEAVKKLQNSTKILQKNNLNLLRDLAVHIAHSLRNS 420 Query: 421 PDWGGVVILHRKEGDSEFMNIIANEIGSEETLLFLTVGDEKGGGLFLLAGPPASVETLGP 480 PDWGGVVILHRKEGDSEFMNIIANEIGSEETLLFLTVGDEKGGGLFLLAGPPASVETLGP Sbjct: 421 PDWGGVVILHRKEGDSEFMNIIANEIGSEETLLFLTVGDEKGGGLFLLAGPPASVETLGP 480 Query: 481 RVAEVLEGKGAGKKGRFQGKATKMSRRMEAQALLQDYISTQSAKE 525 RVAEVLEGKGAGKKGRFQGKATKMSRRMEAQALLQDYISTQSAKE Sbjct: 481 RVAEVLEGKGAGKKGRFQGKATKMSRRMEAQALLQDYISTQSAKE 525 >gi|217416402 alanyl-tRNA synthetase domain containing 1 isoform 1 [Homo sapiens] Length = 586 Score = 1057 bits (2734), Expect = 0.0 Identities = 525/525 (100%), Positives = 525/525 (100%) Query: 1 MEFCVEDSTDVHVLIEDHRIVFSCKNADGVELYNEIEFYAKVNSKDSQDKRSSRSITCFV 60 MEFCVEDSTDVHVLIEDHRIVFSCKNADGVELYNEIEFYAKVNSKDSQDKRSSRSITCFV Sbjct: 62 MEFCVEDSTDVHVLIEDHRIVFSCKNADGVELYNEIEFYAKVNSKDSQDKRSSRSITCFV 121 Query: 61 RKWKEKVAWPRLTKEDIKPVWLSVDFDNWRDWEGDEEMELAHVEHYAELLKKVSTKRPPP 120 RKWKEKVAWPRLTKEDIKPVWLSVDFDNWRDWEGDEEMELAHVEHYAELLKKVSTKRPPP Sbjct: 122 RKWKEKVAWPRLTKEDIKPVWLSVDFDNWRDWEGDEEMELAHVEHYAELLKKVSTKRPPP 181 Query: 121 AMDDLDFTTTVVSCCPAELQTEGSNGKKEVLSGFQVVLEDTVLFPEGGGQPDDRGTINDI 180 AMDDLDFTTTVVSCCPAELQTEGSNGKKEVLSGFQVVLEDTVLFPEGGGQPDDRGTINDI Sbjct: 182 AMDDLDFTTTVVSCCPAELQTEGSNGKKEVLSGFQVVLEDTVLFPEGGGQPDDRGTINDI 241 Query: 181 SVLRVTRRGEQADHFTQTPLDPGSQVLVRVDWERRFDHMQQHSGQHLITAVADHLFKLKT 240 SVLRVTRRGEQADHFTQTPLDPGSQVLVRVDWERRFDHMQQHSGQHLITAVADHLFKLKT Sbjct: 242 SVLRVTRRGEQADHFTQTPLDPGSQVLVRVDWERRFDHMQQHSGQHLITAVADHLFKLKT 301 Query: 241 TSWELGRFRSAIELDTPSMTAEQVAAIEQSVNEKIRDRLPVNVRELSLDDPEVEQVSGRG 300 TSWELGRFRSAIELDTPSMTAEQVAAIEQSVNEKIRDRLPVNVRELSLDDPEVEQVSGRG Sbjct: 302 TSWELGRFRSAIELDTPSMTAEQVAAIEQSVNEKIRDRLPVNVRELSLDDPEVEQVSGRG 361 Query: 301 LPDDHAGPIRVVNIEGVDSNMCCGTHVSNLSDLQVIKILGTEKGKKNRTNLIFLSGNRVL 360 LPDDHAGPIRVVNIEGVDSNMCCGTHVSNLSDLQVIKILGTEKGKKNRTNLIFLSGNRVL Sbjct: 362 LPDDHAGPIRVVNIEGVDSNMCCGTHVSNLSDLQVIKILGTEKGKKNRTNLIFLSGNRVL 421 Query: 361 KWMERSHGTEKALTALLKCGAEDHVEAVKKLQNSTKILQKNNLNLLRDLAVHIAHSLRNS 420 KWMERSHGTEKALTALLKCGAEDHVEAVKKLQNSTKILQKNNLNLLRDLAVHIAHSLRNS Sbjct: 422 KWMERSHGTEKALTALLKCGAEDHVEAVKKLQNSTKILQKNNLNLLRDLAVHIAHSLRNS 481 Query: 421 PDWGGVVILHRKEGDSEFMNIIANEIGSEETLLFLTVGDEKGGGLFLLAGPPASVETLGP 480 PDWGGVVILHRKEGDSEFMNIIANEIGSEETLLFLTVGDEKGGGLFLLAGPPASVETLGP Sbjct: 482 PDWGGVVILHRKEGDSEFMNIIANEIGSEETLLFLTVGDEKGGGLFLLAGPPASVETLGP 541 Query: 481 RVAEVLEGKGAGKKGRFQGKATKMSRRMEAQALLQDYISTQSAKE 525 RVAEVLEGKGAGKKGRFQGKATKMSRRMEAQALLQDYISTQSAKE Sbjct: 542 RVAEVLEGKGAGKKGRFQGKATKMSRRMEAQALLQDYISTQSAKE 586 >gi|217416407 alanyl-tRNA synthetase domain containing 1 isoform 4 [Homo sapiens] Length = 161 Score = 221 bits (564), Expect = 1e-57 Identities = 103/103 (100%), Positives = 103/103 (100%) Query: 24 CKNADGVELYNEIEFYAKVNSKDSQDKRSSRSITCFVRKWKEKVAWPRLTKEDIKPVWLS 83 CKNADGVELYNEIEFYAKVNSKDSQDKRSSRSITCFVRKWKEKVAWPRLTKEDIKPVWLS Sbjct: 47 CKNADGVELYNEIEFYAKVNSKDSQDKRSSRSITCFVRKWKEKVAWPRLTKEDIKPVWLS 106 Query: 84 VDFDNWRDWEGDEEMELAHVEHYAELLKKVSTKRPPPAMDDLD 126 VDFDNWRDWEGDEEMELAHVEHYAELLKKVSTKRPPPAMDDLD Sbjct: 107 VDFDNWRDWEGDEEMELAHVEHYAELLKKVSTKRPPPAMDDLD 149 >gi|217416405 alanyl-tRNA synthetase domain containing 1 isoform 3 [Homo sapiens] Length = 166 Score = 183 bits (464), Expect = 4e-46 Identities = 93/126 (73%), Positives = 93/126 (73%), Gaps = 33/126 (26%) Query: 1 MEFCVEDSTDVHVLIEDHRIVFSCKNADGVELYNEIEFYAKVNSKDSQDKRSSRSITCFV 60 MEFCVEDSTDVHVLIEDHRIVFSCKNADGVELYNEIEFYAKVNSK Sbjct: 62 MEFCVEDSTDVHVLIEDHRIVFSCKNADGVELYNEIEFYAKVNSK--------------- 106 Query: 61 RKWKEKVAWPRLTKEDIKPVWLSVDFDNWRDWEGDEEMELAHVEHYAELLKKVSTKRPPP 120 PVWLSVDFDNWRDWEGDEEMELAHVEHYAELLKKVSTKRPPP Sbjct: 107 ------------------PVWLSVDFDNWRDWEGDEEMELAHVEHYAELLKKVSTKRPPP 148 Query: 121 AMDDLD 126 AMDDLD Sbjct: 149 AMDDLD 154 >gi|23308579 prostaglandin-E synthase 3 [Homo sapiens] Length = 160 Score = 109 bits (272), Expect = 7e-24 Identities = 49/114 (42%), Positives = 77/114 (67%), Gaps = 1/114 (0%) Query: 1 MEFCVEDSTDVHVLIEDHRIVFSCKN-ADGVELYNEIEFYAKVNSKDSQDKRSSRSITCF 59 +EFCVEDS DV+V E ++ FSC +D + NEI+ + ++ DS+ KR+ RSI C Sbjct: 17 IEFCVEDSKDVNVNFEKSKLTFSCLGGSDNFKHLNEIDLFHCIDPNDSKHKRTDRSILCC 76 Query: 60 VRKWKEKVAWPRLTKEDIKPVWLSVDFDNWRDWEGDEEMELAHVEHYAELLKKV 113 +RK + +WPRLTKE K WLSVDF+NW+DWE D + ++++ + ++E++ + Sbjct: 77 LRKGESGQSWPRLTKERAKLNWLSVDFNNWKDWEDDSDEDMSNFDRFSEMMNNM 130 >gi|38569417 alanyl-tRNA synthetase 2, mitochondrial [Homo sapiens] Length = 985 Score = 61.6 bits (148), Expect = 2e-09 Identities = 75/296 (25%), Positives = 121/296 (40%), Gaps = 37/296 (12%) Query: 138 ELQTEGSNGKKEVLSGFQ--VVLEDTVLFPEGGGQPDDRGTI-----NDI--SVLRVTRR 188 +L TE V G + ++L+ T + E GGQ DRG + D+ V R Sbjct: 537 QLYTEDGTAVASVGKGQRCGLLLDRTNFYAEQGGQASDRGYLVRAGQEDVLFPVARAQVC 596 Query: 189 GEQADHFTQTP--LDPGSQVLVRVDWERRFDHMQQHSGQHLITAVADHLFKLKTTSWELG 246 G H P L G QV + VD R M +H+ HL+ T Sbjct: 597 GGFILHEAVAPECLRLGDQVQLHVDEAWRLGCMAKHTATHLLNWALRQTLGPGTEQQGSH 656 Query: 247 RFRSAIELDTPS---MTAEQVAAIEQSVNEKIRDRLPVNVRELSLDDPEVEQVSG-RGLP 302 + LD + +T EQ+ A+E +V E + V + E+ L QV G R L Sbjct: 657 LNPEQLRLDVTTQTPLTPEQLRAVENTVQEAVGQDEAVYMEEVPL--ALTAQVPGLRSLD 714 Query: 303 DDHAGPIRVVNIEGV----------------DSNMCCGTHVSNLSDLQVIKILGTEKGKK 346 + + P+RVV++ GV +CCGTH+ + + I+G + K Sbjct: 715 EVYPDPVRVVSV-GVPVAHALDPASQAALQTSVELCCGTHLLRTGAVGDLVIIGDRQLSK 773 Query: 347 NRTNLIFLSGNRVLKWMERSHGTE---KALTALLKCGAEDHVEAVKKLQNSTKILQ 399 T L+ ++G + + E KA T L G+ D EA++ ++ ++++ Sbjct: 774 GTTRLLAVTGEQAQQARELGQSLAQEVKAATERLSLGSRDVAEALRLSKDIGRLIE 829 >gi|109148542 alanyl-tRNA synthetase [Homo sapiens] Length = 968 Score = 48.9 bits (115), Expect = 1e-05 Identities = 61/267 (22%), Positives = 103/267 (38%), Gaps = 44/267 (16%) Query: 148 KEVLSGFQ--VVLEDTVLFPEGGGQPDDRGTI----------NDISVLRVTRRGEQADHF 195 +EV +G + VVL+ T + E GGQ D G + + +V RG H Sbjct: 517 EEVSTGQECGVVLDKTCFYAEQGGQIYDEGYLVKVDDSSEDKTEFTVKNAQVRGGYVLHI 576 Query: 196 TQT--PLDPGSQVLVRVDWERRFDHMQQHSGQHLITAVADHLFKLKTTSWELGRFRSAIE 253 L G QV + +D RR M H+ H++ F L++ E + S + Sbjct: 577 GTIYGDLKVGDQVWLFIDEPRRRPIMSNHTATHILN------FALRSVLGEADQKGSLVA 630 Query: 254 LDT--------PSMTAEQVAAIEQSVNEKIRDRLPVNVRELSLDDPEVEQVSGRGLPDDH 305 D +M+ +Q+ E+ NE I V ++ L + Q + + Sbjct: 631 PDRLRFDFTAKGAMSTQQIKKAEEIANEMIEAAKAVYTQDCPLAAAKAIQGLRAVFDETY 690 Query: 306 AGPIRVVNI-----EGVDS-----------NMCCGTHVSNLSDLQVIKILGTEKGKKNRT 349 P+RVV+I E +D C GTH+ N S I+ E K Sbjct: 691 PDPVRVVSIGVPVSELLDDPSGPAGSLTSVEFCGGTHLRNSSHAGAFVIVTEEAIAKGIR 750 Query: 350 NLIFLSGNRVLKWMERSHGTEKALTAL 376 ++ ++G K + ++ +K L+ + Sbjct: 751 RIVAVTGAEAQKALRKAESLKKCLSVM 777 >gi|239750861 PREDICTED: hypothetical protein XP_002347581 [Homo sapiens] Length = 190 Score = 43.1 bits (100), Expect = 6e-04 Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 2/76 (2%) Query: 50 KRSSRSITCFVRKWKEKVAWPRLTKEDIKPVWLSVDFDNWRDWEGDEEMELAHVEHYAEL 109 K + R + V+K K W RLTK++ +P++L+ DFD W D E D EMEL E Sbjct: 72 KLTQRQVNITVQK-KVSQWWERLTKQEKRPLFLAPDFDRWLD-ESDAEMELRAKEEERLN 129 Query: 110 LKKVSTKRPPPAMDDL 125 ++ ++ P + +L Sbjct: 130 KLRLESEGSPETLTNL 145 >gi|117168248 protein tyrosine phosphatase-like A domain containing 1 [Homo sapiens] Length = 362 Score = 43.1 bits (100), Expect = 6e-04 Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 2/76 (2%) Query: 50 KRSSRSITCFVRKWKEKVAWPRLTKEDIKPVWLSVDFDNWRDWEGDEEMELAHVEHYAEL 109 K + R + V+K K W RLTK++ +P++L+ DFD W D E D EMEL E Sbjct: 72 KLTQRQVNITVQK-KVSQWWERLTKQEKRPLFLAPDFDRWLD-ESDAEMELRAKEEERLN 129 Query: 110 LKKVSTKRPPPAMDDL 125 ++ ++ P + +L Sbjct: 130 KLRLESEGSPETLTNL 145 >gi|30425444 ankyrin repeat and kinase domain containing 1 [Homo sapiens] Length = 765 Score = 32.3 bits (72), Expect = 1.1 Identities = 31/121 (25%), Positives = 51/121 (42%), Gaps = 9/121 (7%) Query: 367 HGTEKALTALLKCGAEDHVEAVKKLQNSTKILQKNN-LNLLRDLAVHIAHSLRNSPDWGG 425 HG E ++ALL+CGA+ + +Q++ L+++ L H RN W Sbjct: 636 HGEEAVVSALLQCGADPNAAEQSGWTPLHLAVQRSTFLSVINLLEHHANVHARNKVGWTP 695 Query: 426 VVILHRKEGDSEFMNIIAN-------EIGSEETLLFLTVGDEKGGGLFLLAGPPASVETL 478 + K G++ + ++ + G T L L + K G + L G SV TL Sbjct: 696 AHLAALK-GNTAILKVLVEAGAQLDVQDGVSCTPLQLALRSRKQGIMSFLEGKEPSVATL 754 Query: 479 G 479 G Sbjct: 755 G 755 >gi|239582735 radial spoke head 4 homolog A isoform 2 [Homo sapiens] Length = 600 Score = 31.6 bits (70), Expect = 1.9 Identities = 21/107 (19%), Positives = 48/107 (44%) Query: 104 EHYAELLKKVSTKRPPPAMDDLDFTTTVVSCCPAELQTEGSNGKKEVLSGFQVVLEDTVL 163 +H + +L K+ +RP A+D + + V + + + E+L +++ + L Sbjct: 231 DHLSNMLTKILNERPENAVDIFENISQDVKMAHFSKKFDALQNENELLPTYEIAEKQKAL 290 Query: 164 FPEGGGQPDDRGTINDISVLRVTRRGEQADHFTQTPLDPGSQVLVRV 210 F +G + D+ ++I+ + E A +F Q + G+ R+ Sbjct: 291 FLQGHLEGVDQELEDEIAENALPNVMESAFYFEQAGVGLGTDETYRI 337 >gi|58219006 radial spoke head 4 homolog A isoform 1 [Homo sapiens] Length = 716 Score = 31.6 bits (70), Expect = 1.9 Identities = 21/107 (19%), Positives = 48/107 (44%) Query: 104 EHYAELLKKVSTKRPPPAMDDLDFTTTVVSCCPAELQTEGSNGKKEVLSGFQVVLEDTVL 163 +H + +L K+ +RP A+D + + V + + + E+L +++ + L Sbjct: 231 DHLSNMLTKILNERPENAVDIFENISQDVKMAHFSKKFDALQNENELLPTYEIAEKQKAL 290 Query: 164 FPEGGGQPDDRGTINDISVLRVTRRGEQADHFTQTPLDPGSQVLVRV 210 F +G + D+ ++I+ + E A +F Q + G+ R+ Sbjct: 291 FLQGHLEGVDQELEDEIAENALPNVMESAFYFEQAGVGLGTDETYRI 337 >gi|48928056 heat shock protein 70kDa family member 13 precursor [Homo sapiens] Length = 471 Score = 29.3 bits (64), Expect = 9.2 Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 8/77 (10%) Query: 244 ELGRFRSAIELDTPSMTAEQVAAIEQSVNEKIRDRLPVNVRELSL--------DDPEVEQ 295 E+ R R A+E+ ++T Q A + + + +DR + + L DD V Sbjct: 284 EIHRLRQAVEMVKLNLTLHQSAQLSVLLTVEEQDRKEPHSSDTELPKDKLSSADDHRVNS 343 Query: 296 VSGRGLPDDHAGPIRVV 312 GRGL D +G +V+ Sbjct: 344 GFGRGLSDKKSGESQVL 360 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.316 0.133 0.392 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 19,984,496 Number of Sequences: 37866 Number of extensions: 896230 Number of successful extensions: 2172 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 4 Number of HSP's that attempted gapping in prelim test: 2154 Number of HSP's gapped (non-prelim): 14 length of query: 525 length of database: 18,247,518 effective HSP length: 107 effective length of query: 418 effective length of database: 14,195,856 effective search space: 5933867808 effective search space used: 5933867808 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.