Guide to the Human Genome
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Search of human proteins with 13376886

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|13376886 alanyl-tRNA synthetase domain containing 1 isoform
2 [Homo sapiens]
         (525 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|13376886 alanyl-tRNA synthetase domain containing 1 isoform 2...  1057   0.0  
gi|217416402 alanyl-tRNA synthetase domain containing 1 isoform ...  1057   0.0  
gi|217416407 alanyl-tRNA synthetase domain containing 1 isoform ...   221   1e-57
gi|217416405 alanyl-tRNA synthetase domain containing 1 isoform ...   183   4e-46
gi|23308579 prostaglandin-E synthase 3 [Homo sapiens]                 109   7e-24
gi|38569417 alanyl-tRNA synthetase 2, mitochondrial [Homo sapiens]     62   2e-09
gi|109148542 alanyl-tRNA synthetase [Homo sapiens]                     49   1e-05
gi|239750861 PREDICTED: hypothetical protein XP_002347581 [Homo ...    43   6e-04
gi|117168248 protein tyrosine phosphatase-like A domain containi...    43   6e-04
gi|30425444 ankyrin repeat and kinase domain containing 1 [Homo ...    32   1.1  
gi|239582735 radial spoke head 4 homolog A isoform 2 [Homo sapiens]    32   1.9  
gi|58219006 radial spoke head 4 homolog A isoform 1 [Homo sapiens]     32   1.9  
gi|48928056 heat shock protein 70kDa family member 13 precursor ...    29   9.2  

>gi|13376886 alanyl-tRNA synthetase domain containing 1 isoform 2
           [Homo sapiens]
          Length = 525

 Score = 1057 bits (2734), Expect = 0.0
 Identities = 525/525 (100%), Positives = 525/525 (100%)

Query: 1   MEFCVEDSTDVHVLIEDHRIVFSCKNADGVELYNEIEFYAKVNSKDSQDKRSSRSITCFV 60
           MEFCVEDSTDVHVLIEDHRIVFSCKNADGVELYNEIEFYAKVNSKDSQDKRSSRSITCFV
Sbjct: 1   MEFCVEDSTDVHVLIEDHRIVFSCKNADGVELYNEIEFYAKVNSKDSQDKRSSRSITCFV 60

Query: 61  RKWKEKVAWPRLTKEDIKPVWLSVDFDNWRDWEGDEEMELAHVEHYAELLKKVSTKRPPP 120
           RKWKEKVAWPRLTKEDIKPVWLSVDFDNWRDWEGDEEMELAHVEHYAELLKKVSTKRPPP
Sbjct: 61  RKWKEKVAWPRLTKEDIKPVWLSVDFDNWRDWEGDEEMELAHVEHYAELLKKVSTKRPPP 120

Query: 121 AMDDLDFTTTVVSCCPAELQTEGSNGKKEVLSGFQVVLEDTVLFPEGGGQPDDRGTINDI 180
           AMDDLDFTTTVVSCCPAELQTEGSNGKKEVLSGFQVVLEDTVLFPEGGGQPDDRGTINDI
Sbjct: 121 AMDDLDFTTTVVSCCPAELQTEGSNGKKEVLSGFQVVLEDTVLFPEGGGQPDDRGTINDI 180

Query: 181 SVLRVTRRGEQADHFTQTPLDPGSQVLVRVDWERRFDHMQQHSGQHLITAVADHLFKLKT 240
           SVLRVTRRGEQADHFTQTPLDPGSQVLVRVDWERRFDHMQQHSGQHLITAVADHLFKLKT
Sbjct: 181 SVLRVTRRGEQADHFTQTPLDPGSQVLVRVDWERRFDHMQQHSGQHLITAVADHLFKLKT 240

Query: 241 TSWELGRFRSAIELDTPSMTAEQVAAIEQSVNEKIRDRLPVNVRELSLDDPEVEQVSGRG 300
           TSWELGRFRSAIELDTPSMTAEQVAAIEQSVNEKIRDRLPVNVRELSLDDPEVEQVSGRG
Sbjct: 241 TSWELGRFRSAIELDTPSMTAEQVAAIEQSVNEKIRDRLPVNVRELSLDDPEVEQVSGRG 300

Query: 301 LPDDHAGPIRVVNIEGVDSNMCCGTHVSNLSDLQVIKILGTEKGKKNRTNLIFLSGNRVL 360
           LPDDHAGPIRVVNIEGVDSNMCCGTHVSNLSDLQVIKILGTEKGKKNRTNLIFLSGNRVL
Sbjct: 301 LPDDHAGPIRVVNIEGVDSNMCCGTHVSNLSDLQVIKILGTEKGKKNRTNLIFLSGNRVL 360

Query: 361 KWMERSHGTEKALTALLKCGAEDHVEAVKKLQNSTKILQKNNLNLLRDLAVHIAHSLRNS 420
           KWMERSHGTEKALTALLKCGAEDHVEAVKKLQNSTKILQKNNLNLLRDLAVHIAHSLRNS
Sbjct: 361 KWMERSHGTEKALTALLKCGAEDHVEAVKKLQNSTKILQKNNLNLLRDLAVHIAHSLRNS 420

Query: 421 PDWGGVVILHRKEGDSEFMNIIANEIGSEETLLFLTVGDEKGGGLFLLAGPPASVETLGP 480
           PDWGGVVILHRKEGDSEFMNIIANEIGSEETLLFLTVGDEKGGGLFLLAGPPASVETLGP
Sbjct: 421 PDWGGVVILHRKEGDSEFMNIIANEIGSEETLLFLTVGDEKGGGLFLLAGPPASVETLGP 480

Query: 481 RVAEVLEGKGAGKKGRFQGKATKMSRRMEAQALLQDYISTQSAKE 525
           RVAEVLEGKGAGKKGRFQGKATKMSRRMEAQALLQDYISTQSAKE
Sbjct: 481 RVAEVLEGKGAGKKGRFQGKATKMSRRMEAQALLQDYISTQSAKE 525


>gi|217416402 alanyl-tRNA synthetase domain containing 1 isoform 1
           [Homo sapiens]
          Length = 586

 Score = 1057 bits (2734), Expect = 0.0
 Identities = 525/525 (100%), Positives = 525/525 (100%)

Query: 1   MEFCVEDSTDVHVLIEDHRIVFSCKNADGVELYNEIEFYAKVNSKDSQDKRSSRSITCFV 60
           MEFCVEDSTDVHVLIEDHRIVFSCKNADGVELYNEIEFYAKVNSKDSQDKRSSRSITCFV
Sbjct: 62  MEFCVEDSTDVHVLIEDHRIVFSCKNADGVELYNEIEFYAKVNSKDSQDKRSSRSITCFV 121

Query: 61  RKWKEKVAWPRLTKEDIKPVWLSVDFDNWRDWEGDEEMELAHVEHYAELLKKVSTKRPPP 120
           RKWKEKVAWPRLTKEDIKPVWLSVDFDNWRDWEGDEEMELAHVEHYAELLKKVSTKRPPP
Sbjct: 122 RKWKEKVAWPRLTKEDIKPVWLSVDFDNWRDWEGDEEMELAHVEHYAELLKKVSTKRPPP 181

Query: 121 AMDDLDFTTTVVSCCPAELQTEGSNGKKEVLSGFQVVLEDTVLFPEGGGQPDDRGTINDI 180
           AMDDLDFTTTVVSCCPAELQTEGSNGKKEVLSGFQVVLEDTVLFPEGGGQPDDRGTINDI
Sbjct: 182 AMDDLDFTTTVVSCCPAELQTEGSNGKKEVLSGFQVVLEDTVLFPEGGGQPDDRGTINDI 241

Query: 181 SVLRVTRRGEQADHFTQTPLDPGSQVLVRVDWERRFDHMQQHSGQHLITAVADHLFKLKT 240
           SVLRVTRRGEQADHFTQTPLDPGSQVLVRVDWERRFDHMQQHSGQHLITAVADHLFKLKT
Sbjct: 242 SVLRVTRRGEQADHFTQTPLDPGSQVLVRVDWERRFDHMQQHSGQHLITAVADHLFKLKT 301

Query: 241 TSWELGRFRSAIELDTPSMTAEQVAAIEQSVNEKIRDRLPVNVRELSLDDPEVEQVSGRG 300
           TSWELGRFRSAIELDTPSMTAEQVAAIEQSVNEKIRDRLPVNVRELSLDDPEVEQVSGRG
Sbjct: 302 TSWELGRFRSAIELDTPSMTAEQVAAIEQSVNEKIRDRLPVNVRELSLDDPEVEQVSGRG 361

Query: 301 LPDDHAGPIRVVNIEGVDSNMCCGTHVSNLSDLQVIKILGTEKGKKNRTNLIFLSGNRVL 360
           LPDDHAGPIRVVNIEGVDSNMCCGTHVSNLSDLQVIKILGTEKGKKNRTNLIFLSGNRVL
Sbjct: 362 LPDDHAGPIRVVNIEGVDSNMCCGTHVSNLSDLQVIKILGTEKGKKNRTNLIFLSGNRVL 421

Query: 361 KWMERSHGTEKALTALLKCGAEDHVEAVKKLQNSTKILQKNNLNLLRDLAVHIAHSLRNS 420
           KWMERSHGTEKALTALLKCGAEDHVEAVKKLQNSTKILQKNNLNLLRDLAVHIAHSLRNS
Sbjct: 422 KWMERSHGTEKALTALLKCGAEDHVEAVKKLQNSTKILQKNNLNLLRDLAVHIAHSLRNS 481

Query: 421 PDWGGVVILHRKEGDSEFMNIIANEIGSEETLLFLTVGDEKGGGLFLLAGPPASVETLGP 480
           PDWGGVVILHRKEGDSEFMNIIANEIGSEETLLFLTVGDEKGGGLFLLAGPPASVETLGP
Sbjct: 482 PDWGGVVILHRKEGDSEFMNIIANEIGSEETLLFLTVGDEKGGGLFLLAGPPASVETLGP 541

Query: 481 RVAEVLEGKGAGKKGRFQGKATKMSRRMEAQALLQDYISTQSAKE 525
           RVAEVLEGKGAGKKGRFQGKATKMSRRMEAQALLQDYISTQSAKE
Sbjct: 542 RVAEVLEGKGAGKKGRFQGKATKMSRRMEAQALLQDYISTQSAKE 586


>gi|217416407 alanyl-tRNA synthetase domain containing 1 isoform 4
           [Homo sapiens]
          Length = 161

 Score =  221 bits (564), Expect = 1e-57
 Identities = 103/103 (100%), Positives = 103/103 (100%)

Query: 24  CKNADGVELYNEIEFYAKVNSKDSQDKRSSRSITCFVRKWKEKVAWPRLTKEDIKPVWLS 83
           CKNADGVELYNEIEFYAKVNSKDSQDKRSSRSITCFVRKWKEKVAWPRLTKEDIKPVWLS
Sbjct: 47  CKNADGVELYNEIEFYAKVNSKDSQDKRSSRSITCFVRKWKEKVAWPRLTKEDIKPVWLS 106

Query: 84  VDFDNWRDWEGDEEMELAHVEHYAELLKKVSTKRPPPAMDDLD 126
           VDFDNWRDWEGDEEMELAHVEHYAELLKKVSTKRPPPAMDDLD
Sbjct: 107 VDFDNWRDWEGDEEMELAHVEHYAELLKKVSTKRPPPAMDDLD 149


>gi|217416405 alanyl-tRNA synthetase domain containing 1 isoform 3
           [Homo sapiens]
          Length = 166

 Score =  183 bits (464), Expect = 4e-46
 Identities = 93/126 (73%), Positives = 93/126 (73%), Gaps = 33/126 (26%)

Query: 1   MEFCVEDSTDVHVLIEDHRIVFSCKNADGVELYNEIEFYAKVNSKDSQDKRSSRSITCFV 60
           MEFCVEDSTDVHVLIEDHRIVFSCKNADGVELYNEIEFYAKVNSK               
Sbjct: 62  MEFCVEDSTDVHVLIEDHRIVFSCKNADGVELYNEIEFYAKVNSK--------------- 106

Query: 61  RKWKEKVAWPRLTKEDIKPVWLSVDFDNWRDWEGDEEMELAHVEHYAELLKKVSTKRPPP 120
                             PVWLSVDFDNWRDWEGDEEMELAHVEHYAELLKKVSTKRPPP
Sbjct: 107 ------------------PVWLSVDFDNWRDWEGDEEMELAHVEHYAELLKKVSTKRPPP 148

Query: 121 AMDDLD 126
           AMDDLD
Sbjct: 149 AMDDLD 154


>gi|23308579 prostaglandin-E synthase 3 [Homo sapiens]
          Length = 160

 Score =  109 bits (272), Expect = 7e-24
 Identities = 49/114 (42%), Positives = 77/114 (67%), Gaps = 1/114 (0%)

Query: 1   MEFCVEDSTDVHVLIEDHRIVFSCKN-ADGVELYNEIEFYAKVNSKDSQDKRSSRSITCF 59
           +EFCVEDS DV+V  E  ++ FSC   +D  +  NEI+ +  ++  DS+ KR+ RSI C 
Sbjct: 17  IEFCVEDSKDVNVNFEKSKLTFSCLGGSDNFKHLNEIDLFHCIDPNDSKHKRTDRSILCC 76

Query: 60  VRKWKEKVAWPRLTKEDIKPVWLSVDFDNWRDWEGDEEMELAHVEHYAELLKKV 113
           +RK +   +WPRLTKE  K  WLSVDF+NW+DWE D + ++++ + ++E++  +
Sbjct: 77  LRKGESGQSWPRLTKERAKLNWLSVDFNNWKDWEDDSDEDMSNFDRFSEMMNNM 130


>gi|38569417 alanyl-tRNA synthetase 2, mitochondrial [Homo sapiens]
          Length = 985

 Score = 61.6 bits (148), Expect = 2e-09
 Identities = 75/296 (25%), Positives = 121/296 (40%), Gaps = 37/296 (12%)

Query: 138 ELQTEGSNGKKEVLSGFQ--VVLEDTVLFPEGGGQPDDRGTI-----NDI--SVLRVTRR 188
           +L TE       V  G +  ++L+ T  + E GGQ  DRG +      D+   V R    
Sbjct: 537 QLYTEDGTAVASVGKGQRCGLLLDRTNFYAEQGGQASDRGYLVRAGQEDVLFPVARAQVC 596

Query: 189 GEQADHFTQTP--LDPGSQVLVRVDWERRFDHMQQHSGQHLITAVADHLFKLKTTSWELG 246
           G    H    P  L  G QV + VD   R   M +H+  HL+           T      
Sbjct: 597 GGFILHEAVAPECLRLGDQVQLHVDEAWRLGCMAKHTATHLLNWALRQTLGPGTEQQGSH 656

Query: 247 RFRSAIELDTPS---MTAEQVAAIEQSVNEKIRDRLPVNVRELSLDDPEVEQVSG-RGLP 302
                + LD  +   +T EQ+ A+E +V E +     V + E+ L      QV G R L 
Sbjct: 657 LNPEQLRLDVTTQTPLTPEQLRAVENTVQEAVGQDEAVYMEEVPL--ALTAQVPGLRSLD 714

Query: 303 DDHAGPIRVVNIEGV----------------DSNMCCGTHVSNLSDLQVIKILGTEKGKK 346
           + +  P+RVV++ GV                   +CCGTH+     +  + I+G  +  K
Sbjct: 715 EVYPDPVRVVSV-GVPVAHALDPASQAALQTSVELCCGTHLLRTGAVGDLVIIGDRQLSK 773

Query: 347 NRTNLIFLSGNRVLKWMERSHGTE---KALTALLKCGAEDHVEAVKKLQNSTKILQ 399
             T L+ ++G +  +  E         KA T  L  G+ D  EA++  ++  ++++
Sbjct: 774 GTTRLLAVTGEQAQQARELGQSLAQEVKAATERLSLGSRDVAEALRLSKDIGRLIE 829


>gi|109148542 alanyl-tRNA synthetase [Homo sapiens]
          Length = 968

 Score = 48.9 bits (115), Expect = 1e-05
 Identities = 61/267 (22%), Positives = 103/267 (38%), Gaps = 44/267 (16%)

Query: 148 KEVLSGFQ--VVLEDTVLFPEGGGQPDDRGTI----------NDISVLRVTRRGEQADHF 195
           +EV +G +  VVL+ T  + E GGQ  D G +           + +V     RG    H 
Sbjct: 517 EEVSTGQECGVVLDKTCFYAEQGGQIYDEGYLVKVDDSSEDKTEFTVKNAQVRGGYVLHI 576

Query: 196 TQT--PLDPGSQVLVRVDWERRFDHMQQHSGQHLITAVADHLFKLKTTSWELGRFRSAIE 253
                 L  G QV + +D  RR   M  H+  H++       F L++   E  +  S + 
Sbjct: 577 GTIYGDLKVGDQVWLFIDEPRRRPIMSNHTATHILN------FALRSVLGEADQKGSLVA 630

Query: 254 LDT--------PSMTAEQVAAIEQSVNEKIRDRLPVNVRELSLDDPEVEQVSGRGLPDDH 305
            D          +M+ +Q+   E+  NE I     V  ++  L   +  Q       + +
Sbjct: 631 PDRLRFDFTAKGAMSTQQIKKAEEIANEMIEAAKAVYTQDCPLAAAKAIQGLRAVFDETY 690

Query: 306 AGPIRVVNI-----EGVDS-----------NMCCGTHVSNLSDLQVIKILGTEKGKKNRT 349
             P+RVV+I     E +D              C GTH+ N S      I+  E   K   
Sbjct: 691 PDPVRVVSIGVPVSELLDDPSGPAGSLTSVEFCGGTHLRNSSHAGAFVIVTEEAIAKGIR 750

Query: 350 NLIFLSGNRVLKWMERSHGTEKALTAL 376
            ++ ++G    K + ++   +K L+ +
Sbjct: 751 RIVAVTGAEAQKALRKAESLKKCLSVM 777


>gi|239750861 PREDICTED: hypothetical protein XP_002347581 [Homo
           sapiens]
          Length = 190

 Score = 43.1 bits (100), Expect = 6e-04
 Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 2/76 (2%)

Query: 50  KRSSRSITCFVRKWKEKVAWPRLTKEDIKPVWLSVDFDNWRDWEGDEEMELAHVEHYAEL 109
           K + R +   V+K K    W RLTK++ +P++L+ DFD W D E D EMEL   E     
Sbjct: 72  KLTQRQVNITVQK-KVSQWWERLTKQEKRPLFLAPDFDRWLD-ESDAEMELRAKEEERLN 129

Query: 110 LKKVSTKRPPPAMDDL 125
             ++ ++  P  + +L
Sbjct: 130 KLRLESEGSPETLTNL 145


>gi|117168248 protein tyrosine phosphatase-like A domain containing
           1 [Homo sapiens]
          Length = 362

 Score = 43.1 bits (100), Expect = 6e-04
 Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 2/76 (2%)

Query: 50  KRSSRSITCFVRKWKEKVAWPRLTKEDIKPVWLSVDFDNWRDWEGDEEMELAHVEHYAEL 109
           K + R +   V+K K    W RLTK++ +P++L+ DFD W D E D EMEL   E     
Sbjct: 72  KLTQRQVNITVQK-KVSQWWERLTKQEKRPLFLAPDFDRWLD-ESDAEMELRAKEEERLN 129

Query: 110 LKKVSTKRPPPAMDDL 125
             ++ ++  P  + +L
Sbjct: 130 KLRLESEGSPETLTNL 145


>gi|30425444 ankyrin repeat and kinase domain containing 1 [Homo
           sapiens]
          Length = 765

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 31/121 (25%), Positives = 51/121 (42%), Gaps = 9/121 (7%)

Query: 367 HGTEKALTALLKCGAEDHVEAVKKLQNSTKILQKNN-LNLLRDLAVHIAHSLRNSPDWGG 425
           HG E  ++ALL+CGA+ +             +Q++  L+++  L  H     RN   W  
Sbjct: 636 HGEEAVVSALLQCGADPNAAEQSGWTPLHLAVQRSTFLSVINLLEHHANVHARNKVGWTP 695

Query: 426 VVILHRKEGDSEFMNIIAN-------EIGSEETLLFLTVGDEKGGGLFLLAGPPASVETL 478
             +   K G++  + ++         + G   T L L +   K G +  L G   SV TL
Sbjct: 696 AHLAALK-GNTAILKVLVEAGAQLDVQDGVSCTPLQLALRSRKQGIMSFLEGKEPSVATL 754

Query: 479 G 479
           G
Sbjct: 755 G 755


>gi|239582735 radial spoke head 4 homolog A isoform 2 [Homo sapiens]
          Length = 600

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 21/107 (19%), Positives = 48/107 (44%)

Query: 104 EHYAELLKKVSTKRPPPAMDDLDFTTTVVSCCPAELQTEGSNGKKEVLSGFQVVLEDTVL 163
           +H + +L K+  +RP  A+D  +  +  V       + +    + E+L  +++  +   L
Sbjct: 231 DHLSNMLTKILNERPENAVDIFENISQDVKMAHFSKKFDALQNENELLPTYEIAEKQKAL 290

Query: 164 FPEGGGQPDDRGTINDISVLRVTRRGEQADHFTQTPLDPGSQVLVRV 210
           F +G  +  D+   ++I+   +    E A +F Q  +  G+    R+
Sbjct: 291 FLQGHLEGVDQELEDEIAENALPNVMESAFYFEQAGVGLGTDETYRI 337


>gi|58219006 radial spoke head 4 homolog A isoform 1 [Homo sapiens]
          Length = 716

 Score = 31.6 bits (70), Expect = 1.9
 Identities = 21/107 (19%), Positives = 48/107 (44%)

Query: 104 EHYAELLKKVSTKRPPPAMDDLDFTTTVVSCCPAELQTEGSNGKKEVLSGFQVVLEDTVL 163
           +H + +L K+  +RP  A+D  +  +  V       + +    + E+L  +++  +   L
Sbjct: 231 DHLSNMLTKILNERPENAVDIFENISQDVKMAHFSKKFDALQNENELLPTYEIAEKQKAL 290

Query: 164 FPEGGGQPDDRGTINDISVLRVTRRGEQADHFTQTPLDPGSQVLVRV 210
           F +G  +  D+   ++I+   +    E A +F Q  +  G+    R+
Sbjct: 291 FLQGHLEGVDQELEDEIAENALPNVMESAFYFEQAGVGLGTDETYRI 337


>gi|48928056 heat shock protein 70kDa family member 13 precursor
           [Homo sapiens]
          Length = 471

 Score = 29.3 bits (64), Expect = 9.2
 Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 8/77 (10%)

Query: 244 ELGRFRSAIELDTPSMTAEQVAAIEQSVNEKIRDRLPVNVRELSL--------DDPEVEQ 295
           E+ R R A+E+   ++T  Q A +   +  + +DR   +  +  L        DD  V  
Sbjct: 284 EIHRLRQAVEMVKLNLTLHQSAQLSVLLTVEEQDRKEPHSSDTELPKDKLSSADDHRVNS 343

Query: 296 VSGRGLPDDHAGPIRVV 312
             GRGL D  +G  +V+
Sbjct: 344 GFGRGLSDKKSGESQVL 360


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.133    0.392 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,984,496
Number of Sequences: 37866
Number of extensions: 896230
Number of successful extensions: 2172
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 2154
Number of HSP's gapped (non-prelim): 14
length of query: 525
length of database: 18,247,518
effective HSP length: 107
effective length of query: 418
effective length of database: 14,195,856
effective search space: 5933867808
effective search space used: 5933867808
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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