Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 51477177
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|51477177 PREDICTED: hypothetical protein [Homo sapiens]
(287 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239757813 PREDICTED: hypothetical protein [Homo sapiens] 600 e-172
gi|89060771 PREDICTED: hypothetical protein [Homo sapiens] 600 e-172
gi|51477177 PREDICTED: hypothetical protein [Homo sapiens] 600 e-172
gi|41151527 PREDICTED: hypothetical protein [Homo sapiens] 542 e-154
gi|169217059 PREDICTED: hypothetical protein [Homo sapiens] 539 e-153
gi|89060782 PREDICTED: hypothetical protein [Homo sapiens] 539 e-153
gi|51477179 PREDICTED: hypothetical protein [Homo sapiens] 539 e-153
gi|56118234 proline rich 6 [Homo sapiens] 272 2e-73
gi|11415052 retinoid X receptor, beta [Homo sapiens] 42 6e-04
gi|93204879 PR domain containing 15 isoform 1 [Homo sapiens] 38 0.009
gi|14150185 zinc finger, BED-type containing 3 [Homo sapiens] 37 0.020
gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens] 37 0.020
gi|41349446 stromal interaction molecule 2 [Homo sapiens] 36 0.034
gi|61835232 growth differentiation factor 7 preproprotein [Homo ... 34 0.13
gi|81158080 cystin 1 [Homo sapiens] 33 0.22
gi|239749538 PREDICTED: hypothetical protein XP_002347080 [Homo ... 33 0.29
gi|239747357 PREDICTED: hypothetical protein XP_002346431 [Homo ... 33 0.29
gi|239743688 PREDICTED: hypothetical protein XP_002342946 [Homo ... 33 0.29
gi|22547121 tumor necrosis factor receptor superfamily, member 1... 33 0.29
gi|225543407 BTB domain protein BDPL [Homo sapiens] 33 0.29
gi|169161340 PREDICTED: hypothetical protein [Homo sapiens] 33 0.38
gi|6680081 putative GR6 protein [Homo sapiens] 33 0.38
gi|42794273 F-box and leucine-rich repeat protein 22 [Homo sapiens] 32 0.49
gi|203096856 kinesin family member 7 [Homo sapiens] 32 0.49
gi|57242766 hypothetical protein LOC168455 [Homo sapiens] 32 0.49
gi|194018524 solute carrier family 6, member 18 [Homo sapiens] 32 0.64
gi|150170699 kinesin family member 26A [Homo sapiens] 32 0.64
gi|169215850 PREDICTED: transmembrane protein 46-like [Homo sapi... 32 0.84
gi|169214061 PREDICTED: hypothetical protein [Homo sapiens] 31 1.1
gi|169214437 PREDICTED: hypothetical protein [Homo sapiens] 31 1.1
>gi|239757813 PREDICTED: hypothetical protein [Homo sapiens]
Length = 287
Score = 600 bits (1546), Expect = e-172
Identities = 287/287 (100%), Positives = 287/287 (100%)
Query: 1 MGVAGWARAPEAAGAMGRVRNRATAQRRRRKRPGDPPAACAAIAVMGASRAQCPRVQVGV 60
MGVAGWARAPEAAGAMGRVRNRATAQRRRRKRPGDPPAACAAIAVMGASRAQCPRVQVGV
Sbjct: 1 MGVAGWARAPEAAGAMGRVRNRATAQRRRRKRPGDPPAACAAIAVMGASRAQCPRVQVGV 60
Query: 61 GSHAAAKRWLGKLRRKRRWRRAREAGSRDPLPSAPLPDPPAPAESPKELDLGAQRERWET 120
GSHAAAKRWLGKLRRKRRWRRAREAGSRDPLPSAPLPDPPAPAESPKELDLGAQRERWET
Sbjct: 61 GSHAAAKRWLGKLRRKRRWRRAREAGSRDPLPSAPLPDPPAPAESPKELDLGAQRERWET 120
Query: 121 FRKLWGLSCEGAAKVLLDTFEYPGLVHHTGGCHCGAVRFAVWAPADLRVVDCSCRLCRKK 180
FRKLWGLSCEGAAKVLLDTFEYPGLVHHTGGCHCGAVRFAVWAPADLRVVDCSCRLCRKK
Sbjct: 121 FRKLWGLSCEGAAKVLLDTFEYPGLVHHTGGCHCGAVRFAVWAPADLRVVDCSCRLCRKK 180
Query: 181 QHRHFLVPASRFTLLQGAESIVTYRSNTHPALHSFCSRCGVQSFHAAVSDPRVYGVAPHC 240
QHRHFLVPASRFTLLQGAESIVTYRSNTHPALHSFCSRCGVQSFHAAVSDPRVYGVAPHC
Sbjct: 181 QHRHFLVPASRFTLLQGAESIVTYRSNTHPALHSFCSRCGVQSFHAAVSDPRVYGVAPHC 240
Query: 241 LDEGTVRSVVIEEVGGGDPGEEAAEEHKAIHKTSSQSAPACPREQEQ 287
LDEGTVRSVVIEEVGGGDPGEEAAEEHKAIHKTSSQSAPACPREQEQ
Sbjct: 241 LDEGTVRSVVIEEVGGGDPGEEAAEEHKAIHKTSSQSAPACPREQEQ 287
>gi|89060771 PREDICTED: hypothetical protein [Homo sapiens]
Length = 287
Score = 600 bits (1546), Expect = e-172
Identities = 287/287 (100%), Positives = 287/287 (100%)
Query: 1 MGVAGWARAPEAAGAMGRVRNRATAQRRRRKRPGDPPAACAAIAVMGASRAQCPRVQVGV 60
MGVAGWARAPEAAGAMGRVRNRATAQRRRRKRPGDPPAACAAIAVMGASRAQCPRVQVGV
Sbjct: 1 MGVAGWARAPEAAGAMGRVRNRATAQRRRRKRPGDPPAACAAIAVMGASRAQCPRVQVGV 60
Query: 61 GSHAAAKRWLGKLRRKRRWRRAREAGSRDPLPSAPLPDPPAPAESPKELDLGAQRERWET 120
GSHAAAKRWLGKLRRKRRWRRAREAGSRDPLPSAPLPDPPAPAESPKELDLGAQRERWET
Sbjct: 61 GSHAAAKRWLGKLRRKRRWRRAREAGSRDPLPSAPLPDPPAPAESPKELDLGAQRERWET 120
Query: 121 FRKLWGLSCEGAAKVLLDTFEYPGLVHHTGGCHCGAVRFAVWAPADLRVVDCSCRLCRKK 180
FRKLWGLSCEGAAKVLLDTFEYPGLVHHTGGCHCGAVRFAVWAPADLRVVDCSCRLCRKK
Sbjct: 121 FRKLWGLSCEGAAKVLLDTFEYPGLVHHTGGCHCGAVRFAVWAPADLRVVDCSCRLCRKK 180
Query: 181 QHRHFLVPASRFTLLQGAESIVTYRSNTHPALHSFCSRCGVQSFHAAVSDPRVYGVAPHC 240
QHRHFLVPASRFTLLQGAESIVTYRSNTHPALHSFCSRCGVQSFHAAVSDPRVYGVAPHC
Sbjct: 181 QHRHFLVPASRFTLLQGAESIVTYRSNTHPALHSFCSRCGVQSFHAAVSDPRVYGVAPHC 240
Query: 241 LDEGTVRSVVIEEVGGGDPGEEAAEEHKAIHKTSSQSAPACPREQEQ 287
LDEGTVRSVVIEEVGGGDPGEEAAEEHKAIHKTSSQSAPACPREQEQ
Sbjct: 241 LDEGTVRSVVIEEVGGGDPGEEAAEEHKAIHKTSSQSAPACPREQEQ 287
>gi|51477177 PREDICTED: hypothetical protein [Homo sapiens]
Length = 287
Score = 600 bits (1546), Expect = e-172
Identities = 287/287 (100%), Positives = 287/287 (100%)
Query: 1 MGVAGWARAPEAAGAMGRVRNRATAQRRRRKRPGDPPAACAAIAVMGASRAQCPRVQVGV 60
MGVAGWARAPEAAGAMGRVRNRATAQRRRRKRPGDPPAACAAIAVMGASRAQCPRVQVGV
Sbjct: 1 MGVAGWARAPEAAGAMGRVRNRATAQRRRRKRPGDPPAACAAIAVMGASRAQCPRVQVGV 60
Query: 61 GSHAAAKRWLGKLRRKRRWRRAREAGSRDPLPSAPLPDPPAPAESPKELDLGAQRERWET 120
GSHAAAKRWLGKLRRKRRWRRAREAGSRDPLPSAPLPDPPAPAESPKELDLGAQRERWET
Sbjct: 61 GSHAAAKRWLGKLRRKRRWRRAREAGSRDPLPSAPLPDPPAPAESPKELDLGAQRERWET 120
Query: 121 FRKLWGLSCEGAAKVLLDTFEYPGLVHHTGGCHCGAVRFAVWAPADLRVVDCSCRLCRKK 180
FRKLWGLSCEGAAKVLLDTFEYPGLVHHTGGCHCGAVRFAVWAPADLRVVDCSCRLCRKK
Sbjct: 121 FRKLWGLSCEGAAKVLLDTFEYPGLVHHTGGCHCGAVRFAVWAPADLRVVDCSCRLCRKK 180
Query: 181 QHRHFLVPASRFTLLQGAESIVTYRSNTHPALHSFCSRCGVQSFHAAVSDPRVYGVAPHC 240
QHRHFLVPASRFTLLQGAESIVTYRSNTHPALHSFCSRCGVQSFHAAVSDPRVYGVAPHC
Sbjct: 181 QHRHFLVPASRFTLLQGAESIVTYRSNTHPALHSFCSRCGVQSFHAAVSDPRVYGVAPHC 240
Query: 241 LDEGTVRSVVIEEVGGGDPGEEAAEEHKAIHKTSSQSAPACPREQEQ 287
LDEGTVRSVVIEEVGGGDPGEEAAEEHKAIHKTSSQSAPACPREQEQ
Sbjct: 241 LDEGTVRSVVIEEVGGGDPGEEAAEEHKAIHKTSSQSAPACPREQEQ 287
>gi|41151527 PREDICTED: hypothetical protein [Homo sapiens]
Length = 272
Score = 542 bits (1397), Expect = e-154
Identities = 260/272 (95%), Positives = 263/272 (96%)
Query: 16 MGRVRNRATAQRRRRKRPGDPPAACAAIAVMGASRAQCPRVQVGVGSHAAAKRWLGKLRR 75
MGRVRNRATAQRRRRKRPGDPPAACAAIAV GASRAQCPRVQVGVGSHAAAKRWLG+ RR
Sbjct: 1 MGRVRNRATAQRRRRKRPGDPPAACAAIAVTGASRAQCPRVQVGVGSHAAAKRWLGRWRR 60
Query: 76 KRRWRRAREAGSRDPLPSAPLPDPPAPAESPKELDLGAQRERWETFRKLWGLSCEGAAKV 135
KRRWRR R+AG RD LPSAP PDPP PA SPK+LDLGAQRERWETFRKL GLSCEGAAKV
Sbjct: 61 KRRWRRVRKAGPRDLLPSAPTPDPPGPAPSPKDLDLGAQRERWETFRKLRGLSCEGAAKV 120
Query: 136 LLDTFEYPGLVHHTGGCHCGAVRFAVWAPADLRVVDCSCRLCRKKQHRHFLVPASRFTLL 195
LLDTFEYPGLVHHTGGCHCGAVRFAVWAPADLRVVDCSCRLCRKKQHRHFLVPASRFTLL
Sbjct: 121 LLDTFEYPGLVHHTGGCHCGAVRFAVWAPADLRVVDCSCRLCRKKQHRHFLVPASRFTLL 180
Query: 196 QGAESIVTYRSNTHPALHSFCSRCGVQSFHAAVSDPRVYGVAPHCLDEGTVRSVVIEEVG 255
QGAESIVTYRSNTHPALHSFCSRCGVQSFHAAVSDPRVYGVAPHCLDEGTVRSVVIEEVG
Sbjct: 181 QGAESIVTYRSNTHPALHSFCSRCGVQSFHAAVSDPRVYGVAPHCLDEGTVRSVVIEEVG 240
Query: 256 GGDPGEEAAEEHKAIHKTSSQSAPACPREQEQ 287
GGDPGEEAAEEHKAIHKTSSQSAPACPREQEQ
Sbjct: 241 GGDPGEEAAEEHKAIHKTSSQSAPACPREQEQ 272
>gi|169217059 PREDICTED: hypothetical protein [Homo sapiens]
Length = 272
Score = 539 bits (1388), Expect = e-153
Identities = 259/272 (95%), Positives = 262/272 (96%)
Query: 16 MGRVRNRATAQRRRRKRPGDPPAACAAIAVMGASRAQCPRVQVGVGSHAAAKRWLGKLRR 75
MGRVRNRATAQRRRRKRPGDPPAACAAIAV GASRAQCPRVQVGVGSHAAAKRWLG+ RR
Sbjct: 1 MGRVRNRATAQRRRRKRPGDPPAACAAIAVTGASRAQCPRVQVGVGSHAAAKRWLGRWRR 60
Query: 76 KRRWRRAREAGSRDPLPSAPLPDPPAPAESPKELDLGAQRERWETFRKLWGLSCEGAAKV 135
KRRWRR R+AG RD LPSAP P PP PA SPK+LDLGAQRERWETFRKL GLSCEGAAKV
Sbjct: 61 KRRWRRVRKAGPRDLLPSAPTPYPPGPAPSPKDLDLGAQRERWETFRKLRGLSCEGAAKV 120
Query: 136 LLDTFEYPGLVHHTGGCHCGAVRFAVWAPADLRVVDCSCRLCRKKQHRHFLVPASRFTLL 195
LLDTFEYPGLVHHTGGCHCGAVRFAVWAPADLRVVDCSCRLCRKKQHRHFLVPASRFTLL
Sbjct: 121 LLDTFEYPGLVHHTGGCHCGAVRFAVWAPADLRVVDCSCRLCRKKQHRHFLVPASRFTLL 180
Query: 196 QGAESIVTYRSNTHPALHSFCSRCGVQSFHAAVSDPRVYGVAPHCLDEGTVRSVVIEEVG 255
QGAESIVTYRSNTHPALHSFCSRCGVQSFHAAVSDPRVYGVAPHCLDEGTVRSVVIEEVG
Sbjct: 181 QGAESIVTYRSNTHPALHSFCSRCGVQSFHAAVSDPRVYGVAPHCLDEGTVRSVVIEEVG 240
Query: 256 GGDPGEEAAEEHKAIHKTSSQSAPACPREQEQ 287
GGDPGEEAAEEHKAIHKTSSQSAPACPREQEQ
Sbjct: 241 GGDPGEEAAEEHKAIHKTSSQSAPACPREQEQ 272
>gi|89060782 PREDICTED: hypothetical protein [Homo sapiens]
Length = 272
Score = 539 bits (1388), Expect = e-153
Identities = 259/272 (95%), Positives = 262/272 (96%)
Query: 16 MGRVRNRATAQRRRRKRPGDPPAACAAIAVMGASRAQCPRVQVGVGSHAAAKRWLGKLRR 75
MGRVRNRATAQRRRRKRPGDPPAACAAIAV GASRAQCPRVQVGVGSHAAAKRWLG+ RR
Sbjct: 1 MGRVRNRATAQRRRRKRPGDPPAACAAIAVTGASRAQCPRVQVGVGSHAAAKRWLGRWRR 60
Query: 76 KRRWRRAREAGSRDPLPSAPLPDPPAPAESPKELDLGAQRERWETFRKLWGLSCEGAAKV 135
KRRWRR R+AG RD LPSAP P PP PA SPK+LDLGAQRERWETFRKL GLSCEGAAKV
Sbjct: 61 KRRWRRVRKAGPRDLLPSAPTPYPPGPAPSPKDLDLGAQRERWETFRKLRGLSCEGAAKV 120
Query: 136 LLDTFEYPGLVHHTGGCHCGAVRFAVWAPADLRVVDCSCRLCRKKQHRHFLVPASRFTLL 195
LLDTFEYPGLVHHTGGCHCGAVRFAVWAPADLRVVDCSCRLCRKKQHRHFLVPASRFTLL
Sbjct: 121 LLDTFEYPGLVHHTGGCHCGAVRFAVWAPADLRVVDCSCRLCRKKQHRHFLVPASRFTLL 180
Query: 196 QGAESIVTYRSNTHPALHSFCSRCGVQSFHAAVSDPRVYGVAPHCLDEGTVRSVVIEEVG 255
QGAESIVTYRSNTHPALHSFCSRCGVQSFHAAVSDPRVYGVAPHCLDEGTVRSVVIEEVG
Sbjct: 181 QGAESIVTYRSNTHPALHSFCSRCGVQSFHAAVSDPRVYGVAPHCLDEGTVRSVVIEEVG 240
Query: 256 GGDPGEEAAEEHKAIHKTSSQSAPACPREQEQ 287
GGDPGEEAAEEHKAIHKTSSQSAPACPREQEQ
Sbjct: 241 GGDPGEEAAEEHKAIHKTSSQSAPACPREQEQ 272
>gi|51477179 PREDICTED: hypothetical protein [Homo sapiens]
Length = 272
Score = 539 bits (1388), Expect = e-153
Identities = 259/272 (95%), Positives = 262/272 (96%)
Query: 16 MGRVRNRATAQRRRRKRPGDPPAACAAIAVMGASRAQCPRVQVGVGSHAAAKRWLGKLRR 75
MGRVRNRATAQRRRRKRPGDPPAACAAIAV GASRAQCPRVQVGVGSHAAAKRWLG+ RR
Sbjct: 1 MGRVRNRATAQRRRRKRPGDPPAACAAIAVTGASRAQCPRVQVGVGSHAAAKRWLGRWRR 60
Query: 76 KRRWRRAREAGSRDPLPSAPLPDPPAPAESPKELDLGAQRERWETFRKLWGLSCEGAAKV 135
KRRWRR R+AG RD LPSAP P PP PA SPK+LDLGAQRERWETFRKL GLSCEGAAKV
Sbjct: 61 KRRWRRVRKAGPRDLLPSAPTPYPPGPAPSPKDLDLGAQRERWETFRKLRGLSCEGAAKV 120
Query: 136 LLDTFEYPGLVHHTGGCHCGAVRFAVWAPADLRVVDCSCRLCRKKQHRHFLVPASRFTLL 195
LLDTFEYPGLVHHTGGCHCGAVRFAVWAPADLRVVDCSCRLCRKKQHRHFLVPASRFTLL
Sbjct: 121 LLDTFEYPGLVHHTGGCHCGAVRFAVWAPADLRVVDCSCRLCRKKQHRHFLVPASRFTLL 180
Query: 196 QGAESIVTYRSNTHPALHSFCSRCGVQSFHAAVSDPRVYGVAPHCLDEGTVRSVVIEEVG 255
QGAESIVTYRSNTHPALHSFCSRCGVQSFHAAVSDPRVYGVAPHCLDEGTVRSVVIEEVG
Sbjct: 181 QGAESIVTYRSNTHPALHSFCSRCGVQSFHAAVSDPRVYGVAPHCLDEGTVRSVVIEEVG 240
Query: 256 GGDPGEEAAEEHKAIHKTSSQSAPACPREQEQ 287
GGDPGEEAAEEHKAIHKTSSQSAPACPREQEQ
Sbjct: 241 GGDPGEEAAEEHKAIHKTSSQSAPACPREQEQ 272
>gi|56118234 proline rich 6 [Homo sapiens]
Length = 272
Score = 272 bits (696), Expect = 2e-73
Identities = 148/273 (54%), Positives = 176/273 (64%), Gaps = 13/273 (4%)
Query: 16 MGRVRNRATAQRRRRKRPGD---PPAACAAIAVMGASRAQCPRVQVGVGSHAAAKRWLGK 72
M R R+ A A+ R +KR G P A+ AA A+R + Q G S A K K
Sbjct: 1 MRRSRSSAAAKLRGQKRSGASAAPAASAAAALAPSATRTRRSASQAGSKSQAVEKPPSEK 60
Query: 73 LRRKRRWRRAREAGSRDPLPSA------PLPDPPAPA---ESPKELDLGAQRERWETFRK 123
R +R RA+E G +P P P P PP PA S LDLG QRERWETF+K
Sbjct: 61 PRLRRSSPRAQEEGPGEPPPPELALLPPPPPPPPTPATPTSSASNLDLGEQRERWETFQK 120
Query: 124 LWGLSCEGAAKVLLDTFEYPGLVHHTGGCHCGAVRFAVWAPADLRVVDCSCRLCRKKQHR 183
L+ EGAAK+LLDTFEY GLV HTGGCHCGAVRF VWA ADL + DC+C +C+KKQ+R
Sbjct: 121 RQKLTSEGAAKLLLDTFEYQGLVKHTGGCHCGAVRFEVWASADLHIFDCNCSICKKKQNR 180
Query: 184 HFLVPASRFTLLQGAESIVTYRSNTHPALHSFCSRCGVQSFHAAVSDPRVYGVAPHCLDE 243
HF+VPASRF LL+GAE I TY NTH A H+FC RCGVQSF+ S+P +G+APHCLDE
Sbjct: 181 HFIVPASRFKLLKGAEHITTYTFNTHKAQHTFCKRCGVQSFYTPRSNPGGFGIAPHCLDE 240
Query: 244 GTVRSVVIEEVGGGDPGEEAAEEHKAIHKTSSQ 276
GTVRS+V EE G D E+A +EHK I S +
Sbjct: 241 GTVRSMVTEEFNGSD-WEKAMKEHKTIKNMSKE 272
>gi|11415052 retinoid X receptor, beta [Homo sapiens]
Length = 533
Score = 42.0 bits (97), Expect = 6e-04
Identities = 40/113 (35%), Positives = 49/113 (43%), Gaps = 20/113 (17%)
Query: 6 WARAP------EAAGAMGRVRNR-----ATAQRRRRKRPGDPPAACAAIAVMGASRAQCP 54
WA P AAG G V R A R RR+RP PAA AA AV G + Q P
Sbjct: 3 WAARPPFLPQRHAAGQCGPVGVRKEMHCGVASRWRRRRPWLDPAAAAAAAVAGGEQ-QTP 61
Query: 55 RVQVGVGSHAAAKRWLGKLRRKRRWRRAREAGSRDPLP-SAPLPDPPAPAESP 106
+ G A + +G R R+ ++ S +PLP P P PP P P
Sbjct: 62 EPEPG----EAGRDGMGDSGRD---SRSPDSSSPNPLPQGVPPPSPPGPPLPP 107
>gi|93204879 PR domain containing 15 isoform 1 [Homo sapiens]
Length = 1507
Score = 38.1 bits (87), Expect = 0.009
Identities = 34/125 (27%), Positives = 46/125 (36%), Gaps = 19/125 (15%)
Query: 8 RAPEAAGAMG---RVRNRA-------TAQRRRRKRPGDPPAACAAIAVMGASRAQCPRVQ 57
R P A+GA R+ R+ T QR+ R P PP + G +
Sbjct: 4 RRPPASGAAQFPERIATRSPDPIPLCTFQRQPRAAPVQPPCRLFFVTFAGCGHRWRSESK 63
Query: 58 VGVGSHAAAKRWLGKLRRKRRWRRAREAGSRDPLPSAPLPDPPAPAESPKELDLGAQRER 117
G W+ + R R AR GS P P+AP P PP + D+ R R
Sbjct: 64 PG---------WISRSRSGIALRAARPPGSSPPRPAAPRPPPPGGVVAEAPGDVVIPRPR 114
Query: 118 WETFR 122
+ R
Sbjct: 115 VQPMR 119
>gi|14150185 zinc finger, BED-type containing 3 [Homo sapiens]
Length = 234
Score = 37.0 bits (84), Expect = 0.020
Identities = 25/76 (32%), Positives = 32/76 (42%), Gaps = 7/76 (9%)
Query: 32 RPGDPPAACAAIAVMGASRAQCPRVQVGVGSHAAAKRWLGKLRRKRRWRRAREAGSRDPL 91
RPG P A + G +V G G HA LR R R +G+
Sbjct: 58 RPGHPSGHWATCRLCGE------QVGRGPGFHAGTSALWRHLRSAHR-RELESSGAGSSP 110
Query: 92 PSAPLPDPPAPAESPK 107
P+AP P PP PA +P+
Sbjct: 111 PAAPCPPPPGPAAAPE 126
>gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]
Length = 1312
Score = 37.0 bits (84), Expect = 0.020
Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 11/84 (13%)
Query: 17 GRVRNRATAQRRRRKRPGDPPAACAAIAVMGASRAQCPRVQVGVGSHAAAKRWLGKLRRK 76
G R+R+ +RRRR+R PP A ++ +SR + R G H G ++K
Sbjct: 596 GSRRSRSREKRRRRRRSASPPPATSS---SSSSRRERHR-----GKHRDGG---GSKKKK 644
Query: 77 RRWRRAREAGSRDPLPSAPLPDPP 100
+R R E S D AP P PP
Sbjct: 645 KRSRSRGEKRSGDGSEKAPAPAPP 668
Score = 29.6 bits (65), Expect = 3.2
Identities = 22/55 (40%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Query: 64 AAAKRWLG-KLRRKRRWRRAREAGSRDPLPSAPLPDPPAPAESPKELDLGAQRER 117
AA RW G LRRK +R R P P AP P P A A P +R+R
Sbjct: 472 AADSRWGGLDLRRKILTQRRERYRQRSPSP-APAPAPAAAAGPPTRKKSRRERKR 525
>gi|41349446 stromal interaction molecule 2 [Homo sapiens]
Length = 833
Score = 36.2 bits (82), Expect = 0.034
Identities = 35/90 (38%), Positives = 42/90 (46%), Gaps = 16/90 (17%)
Query: 1 MGVAGWARAPEAAGAMG-RVRNRATAQRRRRKRPGDPPAACAAIAVMGASRAQCPRVQVG 59
M AG RAPEAAGA G R+ + RRR RP + PA A +A GA Q +
Sbjct: 1 MNAAG-IRAPEAAGADGTRLAPGGSPCLRRRGRPEESPA--AVVAPRGAGELQAAGAPLR 57
Query: 60 VGSHAAAKRWL----------GKLRRKRRW 79
H A+ R L G L R+RRW
Sbjct: 58 F--HPASPRRLHPASTPGPAWGWLLRRRRW 85
>gi|61835232 growth differentiation factor 7 preproprotein [Homo
sapiens]
Length = 450
Score = 34.3 bits (77), Expect = 0.13
Identities = 34/108 (31%), Positives = 47/108 (43%), Gaps = 13/108 (12%)
Query: 23 ATAQRRRRKRPGDPPAACAAI-AVMGASRAQCPRVQVGVG-----SHAAAKRWL----GK 72
A A RR R+ P P A C + AV G + ++G G AA +R + +
Sbjct: 214 ADAMRRHRREPRPPRAFCLLLRAVAGPVPSPLALRRLGFGWPGGGGSAAEERAVLVVSSR 273
Query: 73 LRRKRRWRRAREAGSRD---PLPSAPLPDPPAPAESPKELDLGAQRER 117
+RK R A +R L S PLPDP SP+ + G +R R
Sbjct: 274 TQRKESLFREIRAQARALGAALASEPLPDPGTGTASPRAVIGGRRRRR 321
>gi|81158080 cystin 1 [Homo sapiens]
Length = 158
Score = 33.5 bits (75), Expect = 0.22
Identities = 32/104 (30%), Positives = 42/104 (40%), Gaps = 21/104 (20%)
Query: 16 MGRVRNRATAQRRRRKRPGDPPAACAAIAVMGASRAQCPRVQVGVGSHAAAKRWLGKLRR 75
MG +R++ RRR+ P PA A A+ G +R + P V A
Sbjct: 1 MGSGSSRSSRTLRRRRSPESLPAGPGAAALEGGTRRRVPVAAAEVPGAA----------- 49
Query: 76 KRRWRRAREAGSRDPLPSAPLPDPPAPAESPKELD-LGAQRERW 118
A EA RDP P AP P E+ + LD L A+ W
Sbjct: 50 ------AEEAPGRDPSPVAP---PDGRDETLRLLDELLAESAAW 84
>gi|239749538 PREDICTED: hypothetical protein XP_002347080 [Homo
sapiens]
Length = 400
Score = 33.1 bits (74), Expect = 0.29
Identities = 25/59 (42%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Query: 48 ASRAQCPR-VQVGVGSHAAAKRWLGKLR--RKRRWRRAREAGSRDPLPSAPLPDPPAPA 103
A +AQ PR V GS +RWL L R R A S LP P P PPAPA
Sbjct: 115 ARKAQTPRPAGVAQGSGGGGERWLQGLGPPRGRGLSTAPPPSSLRLLPPTPRPFPPAPA 173
>gi|239747357 PREDICTED: hypothetical protein XP_002346431 [Homo
sapiens]
Length = 205
Score = 33.1 bits (74), Expect = 0.29
Identities = 31/93 (33%), Positives = 40/93 (43%), Gaps = 16/93 (17%)
Query: 20 RNRATAQRRRRKRPGDP-----PAACAAIAVMGASRA--------QCPRVQVGVGSHAAA 66
+ R RRRR+R G+ PAA AA+ G RA + ++ GVG
Sbjct: 8 KRRRRRCRRRRRREGEERKTGVPAA-AAVRREGEPRAAPGTGRYHEAGTLESGVGGRTGT 66
Query: 67 KRWLGKLRRKRR--WRRAREAGSRDPLPSAPLP 97
R G + RK WRR R + DP S LP
Sbjct: 67 GREEGSVFRKGEGTWRRRRLLAAADPRASPCLP 99
>gi|239743688 PREDICTED: hypothetical protein XP_002342946 [Homo
sapiens]
Length = 400
Score = 33.1 bits (74), Expect = 0.29
Identities = 25/59 (42%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Query: 48 ASRAQCPR-VQVGVGSHAAAKRWLGKLR--RKRRWRRAREAGSRDPLPSAPLPDPPAPA 103
A +AQ PR V GS +RWL L R R A S LP P P PPAPA
Sbjct: 115 ARKAQTPRPAGVAQGSGGGGERWLQGLGPPRGRGLSTAPPPSSLRLLPPTPRPFPPAPA 173
>gi|22547121 tumor necrosis factor receptor superfamily, member 10c
precursor [Homo sapiens]
Length = 259
Score = 33.1 bits (74), Expect = 0.29
Identities = 35/138 (25%), Positives = 53/138 (38%), Gaps = 11/138 (7%)
Query: 148 HTGGCHCGAVRFAVWAPADLRVVDC-SCRLCRKKQHRHFLVPASRFTLLQGAESIVTYRS 206
HTG C+ + A C C +C+ Q +R T+ Q E T+R+
Sbjct: 62 HTGACN-PCTEGVDYTNASNNEPSCFPCTVCKSDQKHKSSCTMTRDTVCQCKEG--TFRN 118
Query: 207 NTHPALHSFCSRCGVQSFHAAVSDPRVYGVAPHCLDE----GTVRSVVIEEVGGGDPGEE 262
P + CSRC S VS+ + C++E TV + EE PG
Sbjct: 119 ENSPEMCRKCSRC--PSGEVQVSNCTSWDDI-QCVEEFGANATVETPAAEETMNTSPGTP 175
Query: 263 AAEEHKAIHKTSSQSAPA 280
A + ++ + APA
Sbjct: 176 APAAEETMNTSPGTPAPA 193
>gi|225543407 BTB domain protein BDPL [Homo sapiens]
Length = 485
Score = 33.1 bits (74), Expect = 0.29
Identities = 16/27 (59%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Query: 83 REAGSRDPLPSAPLPDPPAPAESPKEL 109
R+AG R P PSAP P PP PA +P L
Sbjct: 27 RKAGPRSP-PSAPAPAPPPPAPAPPTL 52
>gi|169161340 PREDICTED: hypothetical protein [Homo sapiens]
Length = 173
Score = 32.7 bits (73), Expect = 0.38
Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 11/59 (18%)
Query: 30 RKRPGDPPAACAAIAVMGASRAQCPRVQVGVGSHAAAKRWLGKLRRKRRWRRAREAGSR 88
R P PPA G S CPR+ K W+GK +R+RRW+ AG R
Sbjct: 57 RSLPEPPPARFRGAP--GLSDVCCPRL---------GKGWVGKEQRRRRWKLRAGAGVR 104
>gi|6680081 putative GR6 protein [Homo sapiens]
Length = 149
Score = 32.7 bits (73), Expect = 0.38
Identities = 22/77 (28%), Positives = 28/77 (36%), Gaps = 14/77 (18%)
Query: 79 WRRAREAGSRDPLPSAPLPDPPAPAESPKELDLGAQRERWETFRKLWGLSCEGAAKVLLD 138
W+ GS P L P P D+ +RER + R+ W L C A+ LL
Sbjct: 46 WKLLGIVGSLAPETLGGLGTEFGPCTHPLPFDMVRERERDDELRQGWLLQCPQCARTLL- 104
Query: 139 TFEYPGLVHHTGGCHCG 155
CHCG
Sbjct: 105 -------------CHCG 108
>gi|42794273 F-box and leucine-rich repeat protein 22 [Homo sapiens]
Length = 241
Score = 32.3 bits (72), Expect = 0.49
Identities = 30/96 (31%), Positives = 42/96 (43%), Gaps = 25/96 (26%)
Query: 18 RVRNRATAQRRRRKRPGDPPAACAAIAV-------MGASRAQCPRVQVGV-GSHAAAKRW 69
RV +R +A R R+R P++ IAV G ++ ++ GV G+ AAA+R
Sbjct: 108 RVCDRLSAVRSPRRREAPAPSSGTPIAVGPKSPRWGGPDHSEFADLRSGVTGARAAARRG 167
Query: 70 LGKLRRKRRWRRAREAGSRDPLPSAPLPDPPAPAES 105
LG LR +R P PPAP S
Sbjct: 168 LGSLRAER-----------------PSETPPAPGVS 186
>gi|203096856 kinesin family member 7 [Homo sapiens]
Length = 1343
Score = 32.3 bits (72), Expect = 0.49
Identities = 39/119 (32%), Positives = 52/119 (43%), Gaps = 18/119 (15%)
Query: 8 RAPE--AAGAMGRVRNRATAQ--RRRRKRPGDPPAACAAIAVMGASRAQCPRVQVGVGSH 63
R PE A+GA G R+R+ + R R+ PG A+ AA +G A+C R + +
Sbjct: 363 RPPEETASGARGPPRHRSETRIIHRGRRAPGPATASAAAAMRLG---AECARYRACTDAA 419
Query: 64 AAAKRWL--------GKLRRKRRWRRAREAGSRDPLPSAPLPDPPAPAESPKELDLGAQ 114
+ R L R+ R W A E G R L SA PD + ES D AQ
Sbjct: 420 YSLLRELQAEPGLPGAAARKVRDWLCAVE-GERSALSSASGPD--SGIESASVEDQAAQ 475
>gi|57242766 hypothetical protein LOC168455 [Homo sapiens]
Length = 235
Score = 32.3 bits (72), Expect = 0.49
Identities = 17/40 (42%), Positives = 22/40 (55%)
Query: 66 AKRWLGKLRRKRRWRRAREAGSRDPLPSAPLPDPPAPAES 105
A+R + + +RR R AR A +R P P P PP P ES
Sbjct: 121 ARRPVPRAAARRRRRGARAAAARRRKPRPPPPPPPPPEES 160
Score = 28.1 bits (61), Expect = 9.3
Identities = 17/35 (48%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 5 GWARAPEAAGAMGRVRN--RATAQRRRRKRPGDPP 37
G AR P A R R RA A RRR+ RP PP
Sbjct: 119 GQARRPVPRAAARRRRRGARAAAARRRKPRPPPPP 153
>gi|194018524 solute carrier family 6, member 18 [Homo sapiens]
Length = 628
Score = 32.0 bits (71), Expect = 0.64
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 101 APAESPKELDLGAQRERWETFRKLWGLSCEGAAKVLLDTFEYPGLVHHTGG 151
AP P DLG +R +W+ + + LSC G A L + + +P L GG
Sbjct: 4 APEPDPAACDLGDERPKWDN-KAQYLLSCTGFAVGLGNIWRFPYLCQTYGG 53
>gi|150170699 kinesin family member 26A [Homo sapiens]
Length = 1882
Score = 32.0 bits (71), Expect = 0.64
Identities = 28/105 (26%), Positives = 37/105 (35%), Gaps = 13/105 (12%)
Query: 13 AGAMGRVRNRATAQRRRRKRPGDPPAACAAIAVMGASRAQCPRVQVGVGSHAAAKR---- 68
+G G + R ++P P AA AV A PR G +H
Sbjct: 858 SGGPGGTDGAQASPARGGRKPSPPEAASPRKAVGTPMAASTPRGSSGPDTHQGTPEPCKA 917
Query: 69 --WLGKLRRKRRW------RRAREAGSRDPLPSAPLPDPPAPAES 105
W + W +A +G R PLPS P P PP E+
Sbjct: 918 IVWGDQREDSSAWPELLVPEKAAVSGGRRPLPS-PAPPPPQLLEA 961
>gi|169215850 PREDICTED: transmembrane protein 46-like [Homo
sapiens]
Length = 547
Score = 31.6 bits (70), Expect = 0.84
Identities = 20/44 (45%), Positives = 24/44 (54%), Gaps = 10/44 (22%)
Query: 81 RAREAGSRDPLPSAPLPDPPAPAESPKE---------LDLGAQR 115
RAR + +R P PS P P PAPA SP + L LGA+R
Sbjct: 368 RARRSANRLPRPSGPRP-RPAPARSPSQSPAGTPCPVLSLGARR 410
>gi|169214061 PREDICTED: hypothetical protein [Homo sapiens]
Length = 384
Score = 31.2 bits (69), Expect = 1.1
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
Query: 61 GSHAAAKRWLGKLRRKRRWRRAREAGS----RDPLPSAPLPDPPAPA 103
G A WL R++RR A AG+ PLP+ PDPP+PA
Sbjct: 166 GGRPEAGCWLENRRQRRRKAGAERAGAGPTLTPPLPAGS-PDPPSPA 211
>gi|169214437 PREDICTED: hypothetical protein [Homo sapiens]
Length = 384
Score = 31.2 bits (69), Expect = 1.1
Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
Query: 61 GSHAAAKRWLGKLRRKRRWRRAREAGS----RDPLPSAPLPDPPAPA 103
G A WL R++RR A AG+ PLP+ PDPP+PA
Sbjct: 166 GGRPEAGCWLENRRQRRRKAGAERAGAGPTLTPPLPAGS-PDPPSPA 211
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.133 0.432
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,286,845
Number of Sequences: 37866
Number of extensions: 675687
Number of successful extensions: 4952
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 91
Number of HSP's that attempted gapping in prelim test: 4789
Number of HSP's gapped (non-prelim): 246
length of query: 287
length of database: 18,247,518
effective HSP length: 101
effective length of query: 186
effective length of database: 14,423,052
effective search space: 2682687672
effective search space used: 2682687672
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.