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Search of human proteins with 51242941
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|51242941 G6f protein [Homo sapiens]
(297 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|51242941 G6f protein [Homo sapiens] 615 e-176
gi|153945782 natural cytotoxicity triggering receptor 2 [Homo sa... 38 0.009
gi|157057547 Fc receptor-like 6 [Homo sapiens] 35 0.079
gi|169178458 PREDICTED: hemicentin 2 [Homo sapiens] 35 0.10
gi|239749684 PREDICTED: hemicentin 2 [Homo sapiens] 35 0.10
gi|169177000 PREDICTED: hemicentin 2 [Homo sapiens] 35 0.10
gi|62339432 platelet receptor Gi24 [Homo sapiens] 34 0.18
gi|205277425 immunoglobulin superfamily, member 9 isoform a [Hom... 33 0.23
gi|205277423 immunoglobulin superfamily, member 9 isoform b [Hom... 33 0.23
gi|118572606 hemicentin 1 [Homo sapiens] 33 0.39
gi|49457851 zinc finger, DHHC-type containing 20 [Homo sapiens] 33 0.39
gi|21314764 Fc receptor-like 3 precursor [Homo sapiens] 32 0.67
gi|22902134 CD8 antigen alpha polypeptide isoform 1 precursor [H... 32 0.88
gi|27886642 CD8 antigen alpha polypeptide isoform 2 precursor [H... 32 0.88
gi|225007536 CD8 antigen alpha polypeptide isoform 1 precursor [... 32 0.88
gi|16445029 immunoglobulin superfamily, member 8 [Homo sapiens] 32 0.88
gi|167614500 lymphocyte-activation protein 3 precursor [Homo sap... 32 0.88
gi|239755187 PREDICTED: similar to hemicentin 2 [Homo sapiens] 31 1.1
gi|16418407 activating NK receptor precursor [Homo sapiens] 31 1.5
gi|205360962 polycystin 1 isoform 2 precursor [Homo sapiens] 30 2.0
gi|205360954 polycystin 1 isoform 1 precursor [Homo sapiens] 30 2.0
gi|4502687 CD84 molecule [Homo sapiens] 30 2.0
gi|117306178 hypothetical protein LOC55731 [Homo sapiens] 30 2.0
gi|117306174 hypothetical protein LOC55731 [Homo sapiens] 30 2.0
gi|224458284 Rho GTPase activating protein 23 [Homo sapiens] 30 2.6
gi|68161541 carcinoembryonic antigen-related cell adhesion molec... 30 2.6
gi|19923195 carcinoembryonic antigen-related cell adhesion molec... 30 2.6
gi|20127422 Down syndrome cell adhesion molecule isoform CHD2-42... 30 2.6
gi|34932496 butyrophilin, subfamily 3, member A2 precursor [Homo... 30 2.6
gi|166197658 butyrophilin, subfamily 1, member A1 [Homo sapiens] 30 2.6
>gi|51242941 G6f protein [Homo sapiens]
Length = 297
Score = 615 bits (1587), Expect = e-176
Identities = 297/297 (100%), Positives = 297/297 (100%)
Query: 1 MAVLFLLLFLCGTPQAADNMQAIYVALGEAVELPCPSPPTLHGDEHLSWFCSPAAGSFTT 60
MAVLFLLLFLCGTPQAADNMQAIYVALGEAVELPCPSPPTLHGDEHLSWFCSPAAGSFTT
Sbjct: 1 MAVLFLLLFLCGTPQAADNMQAIYVALGEAVELPCPSPPTLHGDEHLSWFCSPAAGSFTT 60
Query: 61 LVAQVQVGRPAPDPGKPGRESRLRLLGNYSLWLEGSKEEDAGRYWCAVLGQHHNYQNWRV 120
LVAQVQVGRPAPDPGKPGRESRLRLLGNYSLWLEGSKEEDAGRYWCAVLGQHHNYQNWRV
Sbjct: 61 LVAQVQVGRPAPDPGKPGRESRLRLLGNYSLWLEGSKEEDAGRYWCAVLGQHHNYQNWRV 120
Query: 121 YDVLVLKGSQLSARAADGSPCNVLLCSVVPSRRMDSVTWQEGKGPVRGRVQSFWGSEAAL 180
YDVLVLKGSQLSARAADGSPCNVLLCSVVPSRRMDSVTWQEGKGPVRGRVQSFWGSEAAL
Sbjct: 121 YDVLVLKGSQLSARAADGSPCNVLLCSVVPSRRMDSVTWQEGKGPVRGRVQSFWGSEAAL 180
Query: 181 LLVCPGEGLSEPRSRRPRIIRCLMTHNKGVSFSLAASIDASPALCAPSTGWDMPWILMLL 240
LLVCPGEGLSEPRSRRPRIIRCLMTHNKGVSFSLAASIDASPALCAPSTGWDMPWILMLL
Sbjct: 181 LLVCPGEGLSEPRSRRPRIIRCLMTHNKGVSFSLAASIDASPALCAPSTGWDMPWILMLL 240
Query: 241 LTMGQGVVILALSIVLWRQRVRGAPGRDASIPQFKPEIQVYENIHLARLGPPAHKPR 297
LTMGQGVVILALSIVLWRQRVRGAPGRDASIPQFKPEIQVYENIHLARLGPPAHKPR
Sbjct: 241 LTMGQGVVILALSIVLWRQRVRGAPGRDASIPQFKPEIQVYENIHLARLGPPAHKPR 297
>gi|153945782 natural cytotoxicity triggering receptor 2 [Homo
sapiens]
Length = 276
Score = 38.1 bits (87), Expect = 0.009
Identities = 34/138 (24%), Positives = 53/138 (38%), Gaps = 12/138 (8%)
Query: 4 LFLLLFLCGTPQAADNMQAIYVALGEAVELPCPSPPTLHGDEHLSWFCSPAAGSFTTLVA 63
L LLL L QA Q + G+ + + C PPT E W +A LV
Sbjct: 9 LLLLLLLFPGSQAQSKAQVLQSVAGQTLTVRCQYPPTGSLYEKKGWCKEASALVCIRLVT 68
Query: 64 QVQVGRPAPDPGKPGRESRLRL-----LGNYSLWLEGSKEEDAGRYWCAVLGQHHNYQNW 118
+ P SR + G +++ + +EED+G YWC + N +
Sbjct: 69 SSK-------PRTMAWTSRFTIWDDPDAGFFTVTMTDLREEDSGHYWCRIYRPSDNSVSK 121
Query: 119 RVYDVLVLKGSQLSARAA 136
V LV+ + S + +
Sbjct: 122 SVRFYLVVSPASASTQTS 139
>gi|157057547 Fc receptor-like 6 [Homo sapiens]
Length = 434
Score = 35.0 bits (79), Expect = 0.079
Identities = 50/228 (21%), Positives = 83/228 (36%), Gaps = 65/228 (28%)
Query: 91 LWLEGSKEEDAGRYWCAV--------------------------LGQHHNYQNWRVYDVL 124
L + G+KE D+G YWC V L HH + V D++
Sbjct: 165 LCIPGAKEGDSGLYWCEVAPEGGQVQKQSPQLEVRVQAPVSRPVLTLHHGPADPAVGDMV 224
Query: 125 VLKGSQLSARAADGSPCNVLLCSVVPSRRMDSVTWQEGKGPVRGRVQSFW---GSEAALL 181
QL A GSP ++ S +D P G + + A
Sbjct: 225 -----QLLCEAQRGSP------PILYSFYLDEKIVGNHSAPCGGTTSLLFPVKSEQDAGN 273
Query: 182 LVCPGEG-LSEPRSRRPRIIRCLMTHNKGVSFSLAASIDASPALCAPSTGWDMPWILMLL 240
C E +S RS ++ S+ S L P++ W +PW+ L
Sbjct: 274 YSCEAENSVSRERSEPKKL-----------------SLKGSQVLFTPASNWLVPWLPASL 316
Query: 241 LTMGQGVVILALSIVLWRQRVRGAPGRDASIPQFKP---EIQVYENIH 285
L G++++A +++++ + R A + IP P + +Y N+H
Sbjct: 317 L----GLMVIAAALLVYVRSWRKAGPLPSQIPPTAPGGEQCPLYANVH 360
>gi|169178458 PREDICTED: hemicentin 2 [Homo sapiens]
Length = 3874
Score = 34.7 bits (78), Expect = 0.10
Identities = 35/105 (33%), Positives = 46/105 (43%), Gaps = 18/105 (17%)
Query: 9 FLCGTPQAADNMQAI-YVALGEAVELPCPSPPTLHGDEHLSWFCSPAAGSFTTLVAQVQV 67
++C QA+ +V + EA P L G E S+ P GS + V
Sbjct: 3004 YVCWAENRVGRTQAVSFVHVKEA--------PVLQG-EAFSYLVEPVGGSIQ--LDCVVR 3052
Query: 68 GRPAPD-----PGKPGRESRLR-LLGNYSLWLEGSKEEDAGRYWC 106
G P PD G P R S LR L N SL + ++ +DAGRY C
Sbjct: 3053 GDPVPDIHWIKDGLPLRGSHLRHQLQNGSLTIHRTERDDAGRYQC 3097
Score = 33.5 bits (75), Expect = 0.23
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 7/71 (9%)
Query: 36 PSPPTLHGDEHLSWFCSPAAGSFTTLVAQVQVGRPAPDPGKPGRESRLRLLGNYSLWLEG 95
P T+ + ++ C A G T + +Q G+P RLR L + SLWLE
Sbjct: 3124 PQDMTVRSGDDVALRCQ-ATGEPTPTIEWLQAGQPLR------ASRRLRTLPDGSLWLEN 3176
Query: 96 SKEEDAGRYWC 106
+ DAG Y C
Sbjct: 3177 VETGDAGTYDC 3187
Score = 32.0 bits (71), Expect = 0.67
Identities = 38/150 (25%), Positives = 65/150 (43%), Gaps = 16/150 (10%)
Query: 32 ELPCPSPPTLHGDEHLSWFCSPAAGSFTTLVAQVQVGRPAP--------DPGKPGRESRL 83
EL PP L GD + A S TL+ + +G P P +P PG ++ L
Sbjct: 1152 ELSVLVPPELIGDLDPLTNITAALHSPLTLLCEA-MGIPPPAIRWFRGEEPVSPGEDTYL 1210
Query: 84 RLLGNYSLWLEGSKEEDAGRYWCAVLGQHHNYQNWRVYDVLV---LKGSQLS--ARAADG 138
L G + L + ++E+D+G Y C + + +VLV ++ L + DG
Sbjct: 1211 -LAGGWMLKMTQTQEQDSGLYSCLASNEAGEARRNFSVEVLVPPSIENEDLEEVIKVLDG 1269
Query: 139 SPCNVLLCSVVPSRRMDSVTWQEGKGPVRG 168
+ L+C+V + +++G+ RG
Sbjct: 1270 QTAH-LMCNVTGHPQPKLTWFKDGRPLARG 1298
>gi|239749684 PREDICTED: hemicentin 2 [Homo sapiens]
Length = 5065
Score = 34.7 bits (78), Expect = 0.10
Identities = 35/105 (33%), Positives = 46/105 (43%), Gaps = 18/105 (17%)
Query: 9 FLCGTPQAADNMQAI-YVALGEAVELPCPSPPTLHGDEHLSWFCSPAAGSFTTLVAQVQV 67
++C QA+ +V + EA P L G E S+ P GS + V
Sbjct: 4195 YVCWAENRVGRTQAVSFVHVKEA--------PVLQG-EAFSYLVEPVGGSIQ--LDCVVR 4243
Query: 68 GRPAPD-----PGKPGRESRLR-LLGNYSLWLEGSKEEDAGRYWC 106
G P PD G P R S LR L N SL + ++ +DAGRY C
Sbjct: 4244 GDPVPDIHWIKDGLPLRGSHLRHQLQNGSLTIHRTERDDAGRYQC 4288
Score = 33.5 bits (75), Expect = 0.23
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 7/71 (9%)
Query: 36 PSPPTLHGDEHLSWFCSPAAGSFTTLVAQVQVGRPAPDPGKPGRESRLRLLGNYSLWLEG 95
P T+ + ++ C A G T + +Q G+P RLR L + SLWLE
Sbjct: 4315 PQDMTVRSGDDVALRCQ-ATGEPTPTIEWLQAGQPLR------ASRRLRTLPDGSLWLEN 4367
Query: 96 SKEEDAGRYWC 106
+ DAG Y C
Sbjct: 4368 VETGDAGTYDC 4378
Score = 32.0 bits (71), Expect = 0.67
Identities = 38/150 (25%), Positives = 65/150 (43%), Gaps = 16/150 (10%)
Query: 32 ELPCPSPPTLHGDEHLSWFCSPAAGSFTTLVAQVQVGRPAP--------DPGKPGRESRL 83
EL PP L GD + A S TL+ + +G P P +P PG ++ L
Sbjct: 2343 ELSVLVPPELIGDLDPLTNITAALHSPLTLLCEA-MGIPPPAIRWFRGEEPVSPGEDTYL 2401
Query: 84 RLLGNYSLWLEGSKEEDAGRYWCAVLGQHHNYQNWRVYDVLV---LKGSQLS--ARAADG 138
L G + L + ++E+D+G Y C + + +VLV ++ L + DG
Sbjct: 2402 -LAGGWMLKMTQTQEQDSGLYSCLASNEAGEARRNFSVEVLVPPSIENEDLEEVIKVLDG 2460
Query: 139 SPCNVLLCSVVPSRRMDSVTWQEGKGPVRG 168
+ L+C+V + +++G+ RG
Sbjct: 2461 QTAH-LMCNVTGHPQPKLTWFKDGRPLARG 2489
Score = 30.4 bits (67), Expect = 2.0
Identities = 49/215 (22%), Positives = 79/215 (36%), Gaps = 61/215 (28%)
Query: 14 PQAADNMQAIYVALGEAVELPCPSPPTLHGDEHLSWFCSPAAGSFTTLVAQVQVGRPAPD 73
PQ A + + V G+ V LPC V GRP P+
Sbjct: 885 PQIASSAPTVRVLEGQPVSLPCI----------------------------VLAGRPLPE 916
Query: 74 --------PGKPGRESRLRLLGNYSLWLEGSKEEDAGRYWCA---VLGQHHNYQNWRVYD 122
P PG +R G SL L+ + +E AGRY C G H R +
Sbjct: 917 RHWLKDGRPLPPGSRHSIRADG--SLHLDRALQEHAGRYSCVATNTAGSQH-----RDVE 969
Query: 123 VLVLKGSQLSARAA-----DGSPCNV-LLCSVVPSRRMDSVTWQEGKGPVRGRVQSFWGS 176
++V ++ A +G P ++ + S VP+ ++TW + + R + S
Sbjct: 970 LVVQVPPRIHPTATHHITNEGVPASLPCVASGVPA---PTITWTKETNALTSRGPHYNVS 1026
Query: 177 EAALLLVCPGEGLSEPRSRRPRIIRCLMTHNKGVS 211
+ LL+ ++P ++ C T+ G S
Sbjct: 1027 KEGTLLI------AQPSAQDAGAYVCTATNTVGFS 1055
>gi|169177000 PREDICTED: hemicentin 2 [Homo sapiens]
Length = 3783
Score = 34.7 bits (78), Expect = 0.10
Identities = 35/105 (33%), Positives = 46/105 (43%), Gaps = 18/105 (17%)
Query: 9 FLCGTPQAADNMQAI-YVALGEAVELPCPSPPTLHGDEHLSWFCSPAAGSFTTLVAQVQV 67
++C QA+ +V + EA P L G E S+ P GS + V
Sbjct: 2913 YVCWAENRVGRTQAVSFVHVKEA--------PVLQG-EAFSYLVEPVGGSIQ--LDCVVR 2961
Query: 68 GRPAPD-----PGKPGRESRLR-LLGNYSLWLEGSKEEDAGRYWC 106
G P PD G P R S LR L N SL + ++ +DAGRY C
Sbjct: 2962 GDPVPDIHWIKDGLPLRGSHLRHQLQNGSLTIRRTERDDAGRYQC 3006
Score = 33.5 bits (75), Expect = 0.23
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 7/71 (9%)
Query: 36 PSPPTLHGDEHLSWFCSPAAGSFTTLVAQVQVGRPAPDPGKPGRESRLRLLGNYSLWLEG 95
P T+ + ++ C A G T + +Q G+P RLR L + SLWLE
Sbjct: 3033 PQDMTVRSGDDVALRCQ-ATGEPTPTIEWLQAGQPLR------ASRRLRTLPDGSLWLEN 3085
Query: 96 SKEEDAGRYWC 106
+ DAG Y C
Sbjct: 3086 VETGDAGTYDC 3096
Score = 32.0 bits (71), Expect = 0.67
Identities = 38/150 (25%), Positives = 65/150 (43%), Gaps = 16/150 (10%)
Query: 32 ELPCPSPPTLHGDEHLSWFCSPAAGSFTTLVAQVQVGRPAP--------DPGKPGRESRL 83
EL PP L GD + A S TL+ + +G P P +P PG ++ L
Sbjct: 1061 ELSVLVPPELIGDLDPLTNITAALHSPLTLLCEA-MGIPPPAIRWFRGEEPVSPGEDTYL 1119
Query: 84 RLLGNYSLWLEGSKEEDAGRYWCAVLGQHHNYQNWRVYDVLV---LKGSQLS--ARAADG 138
L G + L + ++E+D+G Y C + + +VLV ++ L + DG
Sbjct: 1120 -LAGGWMLKMTQTQEQDSGLYSCLASNEAGEARRNFSVEVLVPPSIENEDLEEVIKVLDG 1178
Query: 139 SPCNVLLCSVVPSRRMDSVTWQEGKGPVRG 168
+ L+C+V + +++G+ RG
Sbjct: 1179 QTAH-LMCNVTGHPQPKLTWFKDGRPLARG 1207
>gi|62339432 platelet receptor Gi24 [Homo sapiens]
Length = 311
Score = 33.9 bits (76), Expect = 0.18
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 8/79 (10%)
Query: 78 GRESRLRLLGNYSLWLEGSKEEDAGRYWCAVLGQHHNYQNWRVYDVLVLKGSQLSARAAD 137
G ES GN+S+ + D+G Y C V+ H++ RV+ + +L +
Sbjct: 118 GLESASDHHGNFSITMRNLTLLDSGLYCCLVVEIRHHHSEHRVHGAM-----ELQVQTGK 172
Query: 138 GSPCNVLLCSVVPSRRMDS 156
+P N C V PS DS
Sbjct: 173 DAPSN---CVVYPSSSQDS 188
>gi|205277425 immunoglobulin superfamily, member 9 isoform a [Homo
sapiens]
Length = 1179
Score = 33.5 bits (75), Expect = 0.23
Identities = 36/119 (30%), Positives = 50/119 (42%), Gaps = 16/119 (13%)
Query: 1 MAVLFLLLFLCGTPQAADNMQAIYVALGEAVELPCP-----SPPTLHGDEHLSWFCSPAA 55
+AVL L++ + + ++ GE+V L C P LH E L +
Sbjct: 7 LAVLSLVISQGADGRGKPEVVSVVGRAGESVVLGCDLLPPAGRPPLHVIEWLRF------ 60
Query: 56 GSFTTLVAQVQVGRPAPDPGKPGRESRLRLLGNYSLWLEGSKEEDAGRYWCAV--LGQH 112
G + Q + P DP GR +RL SL +EG + ED G Y C V L QH
Sbjct: 61 GFLLPIFIQFGLYSPRIDPDYVGR---VRLQKGASLQIEGLRVEDQGWYECRVFFLDQH 116
>gi|205277423 immunoglobulin superfamily, member 9 isoform b [Homo
sapiens]
Length = 1163
Score = 33.5 bits (75), Expect = 0.23
Identities = 36/119 (30%), Positives = 50/119 (42%), Gaps = 16/119 (13%)
Query: 1 MAVLFLLLFLCGTPQAADNMQAIYVALGEAVELPCP-----SPPTLHGDEHLSWFCSPAA 55
+AVL L++ + + ++ GE+V L C P LH E L +
Sbjct: 7 LAVLSLVISQGADGRGKPEVVSVVGRAGESVVLGCDLLPPAGRPPLHVIEWLRF------ 60
Query: 56 GSFTTLVAQVQVGRPAPDPGKPGRESRLRLLGNYSLWLEGSKEEDAGRYWCAV--LGQH 112
G + Q + P DP GR +RL SL +EG + ED G Y C V L QH
Sbjct: 61 GFLLPIFIQFGLYSPRIDPDYVGR---VRLQKGASLQIEGLRVEDQGWYECRVFFLDQH 116
>gi|118572606 hemicentin 1 [Homo sapiens]
Length = 5635
Score = 32.7 bits (73), Expect = 0.39
Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 9/80 (11%)
Query: 38 PPTLHGDEHLSWFCSPAAGSFTTLVAQVQVGRPAPDP--GKPGRE----SRLRLLGNYSL 91
PP GD +W P G+ L +V+ G P P + G + R+R LGN SL
Sbjct: 4348 PPVFKGDYPSNWI-EPLGGN-AILNCEVK-GDPTPTIQWNRKGVDIEISHRIRQLGNGSL 4404
Query: 92 WLEGSKEEDAGRYWCAVLGQ 111
+ G+ EDAG Y C +
Sbjct: 4405 AIYGTVNEDAGDYTCVATNE 4424
Score = 29.6 bits (65), Expect = 3.3
Identities = 39/133 (29%), Positives = 55/133 (41%), Gaps = 17/133 (12%)
Query: 6 LLLFLCGTPQAADNMQAIYVALGEA------VELPCPSPPTLHGDEHLSWFCSPAAGSFT 59
LL+ TP DN + I VA+ EA L PP + E ++ S T
Sbjct: 1322 LLVIASVTPY--DNGEYICVAVNEAGTTERKYNLKVHVPPVIKDKEQVT-NVSVLLNQLT 1378
Query: 60 TLVAQVQVGRPAP------DPGKPGRESRLRLLGNYS-LWLEGSKEEDAGRYWCAVLGQH 112
L +V+ G P+P D + S ++ + N L L + EDAGRY C +
Sbjct: 1379 NLFCEVE-GTPSPIIMWYKDNVQVTESSTIQTVNNGKILKLFRATPEDAGRYSCKAINIA 1437
Query: 113 HNYQNWRVYDVLV 125
Q + DVLV
Sbjct: 1438 GTSQKYFNIDVLV 1450
Score = 29.3 bits (64), Expect = 4.4
Identities = 14/28 (50%), Positives = 17/28 (60%)
Query: 81 SRLRLLGNYSLWLEGSKEEDAGRYWCAV 108
+R+R L N SL L+ K DAG Y C V
Sbjct: 566 ARIRTLANLSLELKSVKFNDAGEYHCMV 593
>gi|49457851 zinc finger, DHHC-type containing 20 [Homo sapiens]
Length = 354
Score = 32.7 bits (73), Expect = 0.39
Identities = 26/77 (33%), Positives = 33/77 (42%), Gaps = 11/77 (14%)
Query: 23 IYVALGEAVELPCPSPPTLHGDEHLSWFCSPAAGSFTTLVAQVQVGRPAPDPGKPGRESR 82
I+ +LG+ C P L G + P S T + G P P KP ES+
Sbjct: 282 IFSSLGDG----CSFPTRLVGMD-------PEQASVTNQNEYARSGSNQPFPIKPLSESK 330
Query: 83 LRLLGNYSLWLEGSKEE 99
RLL + S WLE EE
Sbjct: 331 NRLLDSESQWLENGAEE 347
>gi|21314764 Fc receptor-like 3 precursor [Homo sapiens]
Length = 734
Score = 32.0 bits (71), Expect = 0.67
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Query: 36 PSPPTLHGDEHLSWFCSPAAGSFTTLVAQVQVGRPAPDPGKPGRESRLRLLGNYSLWLEG 95
P+ L E++ CS A GS T + + GR GR+++ LL L +
Sbjct: 294 PTGGQLIEGENMVLICSVAQGSGTVTFSWHKEGRVR----SLGRKTQRSLLAE--LHVLT 347
Query: 96 SKEEDAGRYWCAVLGQH 112
KE DAGRY+CA H
Sbjct: 348 VKESDAGRYYCAADNVH 364
Score = 28.5 bits (62), Expect = 7.4
Identities = 38/137 (27%), Positives = 53/137 (38%), Gaps = 22/137 (16%)
Query: 52 SPAAGSFTTLVAQVQVGRPAPDPGKPG---RESRLRLLG---NYSLWLEGSKEEDAGRYW 105
+P GS TL + Q+ PD R+S+ LG + L + ED+G YW
Sbjct: 200 TPIEGSPMTLTCETQLSPQRPDVQLQFSLFRDSQTLGLGWSRSPRLQIPAMWTEDSGSYW 259
Query: 106 CAVLGQHHNYQ------NWRVYDVLVLKGSQLSARAADGSPCN----VLLCSVVPSRRMD 155
C V H+ + RV V V L R G VL+CSV
Sbjct: 260 CEVETVTHSIKKRSLRSQIRVQRVPV-SNVNLEIRPTGGQLIEGENMVLICSVAQGSGTV 318
Query: 156 SVTWQEGKGPVRGRVQS 172
+ +W + GRV+S
Sbjct: 319 TFSWHK-----EGRVRS 330
>gi|22902134 CD8 antigen alpha polypeptide isoform 1 precursor [Homo
sapiens]
Length = 235
Score = 31.6 bits (70), Expect = 0.88
Identities = 32/94 (34%), Positives = 39/94 (41%), Gaps = 9/94 (9%)
Query: 27 LGEAVELPCP---SPPTLHGDEHLSWFCSP--AAGSFTTLVAQVQVGRPAPDPGKPGRES 81
LGE VEL C S PT SW P AA S T L+ Q A + R S
Sbjct: 35 LGETVELKCQVLLSNPT----SGCSWLFQPRGAAASPTFLLYLSQNKPKAAEGLDTQRFS 90
Query: 82 RLRLLGNYSLWLEGSKEEDAGRYWCAVLGQHHNY 115
RL + L L + E+ G Y+C+ L Y
Sbjct: 91 GKRLGDTFVLTLSDFRRENEGYYFCSALSNSIMY 124
>gi|27886642 CD8 antigen alpha polypeptide isoform 2 precursor [Homo
sapiens]
Length = 198
Score = 31.6 bits (70), Expect = 0.88
Identities = 32/94 (34%), Positives = 39/94 (41%), Gaps = 9/94 (9%)
Query: 27 LGEAVELPCP---SPPTLHGDEHLSWFCSP--AAGSFTTLVAQVQVGRPAPDPGKPGRES 81
LGE VEL C S PT SW P AA S T L+ Q A + R S
Sbjct: 35 LGETVELKCQVLLSNPT----SGCSWLFQPRGAAASPTFLLYLSQNKPKAAEGLDTQRFS 90
Query: 82 RLRLLGNYSLWLEGSKEEDAGRYWCAVLGQHHNY 115
RL + L L + E+ G Y+C+ L Y
Sbjct: 91 GKRLGDTFVLTLSDFRRENEGYYFCSALSNSIMY 124
>gi|225007536 CD8 antigen alpha polypeptide isoform 1 precursor
[Homo sapiens]
Length = 235
Score = 31.6 bits (70), Expect = 0.88
Identities = 32/94 (34%), Positives = 39/94 (41%), Gaps = 9/94 (9%)
Query: 27 LGEAVELPCP---SPPTLHGDEHLSWFCSP--AAGSFTTLVAQVQVGRPAPDPGKPGRES 81
LGE VEL C S PT SW P AA S T L+ Q A + R S
Sbjct: 35 LGETVELKCQVLLSNPT----SGCSWLFQPRGAAASPTFLLYLSQNKPKAAEGLDTQRFS 90
Query: 82 RLRLLGNYSLWLEGSKEEDAGRYWCAVLGQHHNY 115
RL + L L + E+ G Y+C+ L Y
Sbjct: 91 GKRLGDTFVLTLSDFRRENEGYYFCSALSNSIMY 124
>gi|16445029 immunoglobulin superfamily, member 8 [Homo sapiens]
Length = 613
Score = 31.6 bits (70), Expect = 0.88
Identities = 29/88 (32%), Positives = 39/88 (44%), Gaps = 9/88 (10%)
Query: 28 GEAVELPCP-----SPPTLHGDEHLSWFCSPA-AGSFTTLVAQVQV-GRPAPDPGKPGRE 80
GE +EL C P H + W +PA A LVAQ+ G + PG GR
Sbjct: 319 GEPLELLCNVSGALPPAGRHAAYSVGWEMAPAGAPGPGRLVAQLDTEGVGSLGPGYEGRH 378
Query: 81 SRLRLLGN--YSLWLEGSKEEDAGRYWC 106
+ + + Y L LE ++ DAG Y C
Sbjct: 379 IAMEKVASRTYRLRLEAARPGDAGTYRC 406
>gi|167614500 lymphocyte-activation protein 3 precursor [Homo
sapiens]
Length = 525
Score = 31.6 bits (70), Expect = 0.88
Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 12/96 (12%)
Query: 80 ESRLRLLGNYSLWLEGSKEEDAGRYWCAVLGQHHNYQNWRVYDVLVLKGSQLSARAAD-- 137
+ R R G++SLWL ++ DAG Y AV + ++ + L L+ Q S A+
Sbjct: 123 DERGRQRGDFSLWLRPARRADAGEYRAAV-----HLRDRALSCRLRLRLGQASMTASPPG 177
Query: 138 ---GSPCNVLLCSVVPSRRMDSVTWQEGKGPVRGRV 170
S +L CS R SV W +G +GRV
Sbjct: 178 SLRASDWVILNCSFSRPDRPASVHWFRNRG--QGRV 211
>gi|239755187 PREDICTED: similar to hemicentin 2 [Homo sapiens]
Length = 1215
Score = 31.2 bits (69), Expect = 1.1
Identities = 51/229 (22%), Positives = 85/229 (37%), Gaps = 62/229 (27%)
Query: 14 PQAADNMQAIYVALGEAVELPCPSPPTLHGDEHLSWFCSPAAGSFTTLVAQVQVGRPAPD 73
PQ A + + V G+ V LPC V GRP P+
Sbjct: 768 PQIASSAPTVRVLEGQPVSLPCI----------------------------VLAGRPLPE 799
Query: 74 --------PGKPGRESRLRLLGNYSLWLEGSKEEDAGRYWCA---VLGQHHNYQNWRVYD 122
P PG +R G SL L+ + +E AGRY C G H R +
Sbjct: 800 RHWLKDGRPLPPGSRHSIRADG--SLHLDRALQEHAGRYSCVATNTAGSQH-----RDVE 852
Query: 123 VLVLKGSQLSARAA-----DGSPCNV-LLCSVVPSRRMDSVTWQEGKGPVRGRVQSFWGS 176
++V ++ A +G P ++ + S VP+ ++TW + + R + S
Sbjct: 853 LVVQVPPRIHPTATHHITNEGVPASLPCVASGVPA---PTITWTKETNALTSRGPHYNVS 909
Query: 177 EAALLLVCPGEGLSEPRSRRPRIIRCLMTHNKGVSF-SLAASIDASPAL 224
+ LL+ ++P ++ C T+ G S + S++ P +
Sbjct: 910 KEGTLLI------AQPSAQDAGAYVCTATNTVGFSSQEMRLSVNTKPRI 952
>gi|16418407 activating NK receptor precursor [Homo sapiens]
Length = 331
Score = 30.8 bits (68), Expect = 1.5
Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 10/107 (9%)
Query: 2 AVLFLLLFLCGTPQAADNMQAIYV--ALGEAVELPCPSPPTLHGDE--HLSWFCSPAAGS 57
++LF+ F G + ++ + V LGE+V LP P G++ ++W + + +
Sbjct: 7 SLLFVFCFGPGNVVSQSSLTPLMVNGILGESVTLPLEFPA---GEKVNFITWLFNETSLA 63
Query: 58 FTTLVAQVQVGRPAPDPGKPGRESRLRLLGNYSLWLEGSKEEDAGRY 104
F + + P P + RL +YSL L K ED G Y
Sbjct: 64 F---IVPHETKSPEIHVTNPKQGKRLNFTQSYSLQLSNLKMEDTGSY 107
>gi|205360962 polycystin 1 isoform 2 precursor [Homo sapiens]
Length = 4302
Score = 30.4 bits (67), Expect = 2.0
Identities = 33/113 (29%), Positives = 42/113 (37%), Gaps = 32/113 (28%)
Query: 170 VQSFWGSEAALLLVCPGEGLSEPRSRRPRIIRCLMTHNKGVSFSLAASIDASPALCAPST 229
V S W ALL++CPG GLS + A S SP LC
Sbjct: 4051 VDSLWSVAQALLVLCPGTGLS--------------------TLCPAESWHLSPLLCVGL- 4089
Query: 230 GWDMPWILMLLLTMGQGVVILALSIVLWR-QRVRGAPGRDASIPQFKPEIQVY 281
W L L + G VIL WR +RG R A PQ ++++
Sbjct: 4090 -----WALRLWGALRLGAVILR-----WRYHALRGELYRPAWEPQDYEMVELF 4132
>gi|205360954 polycystin 1 isoform 1 precursor [Homo sapiens]
Length = 4303
Score = 30.4 bits (67), Expect = 2.0
Identities = 33/113 (29%), Positives = 42/113 (37%), Gaps = 32/113 (28%)
Query: 170 VQSFWGSEAALLLVCPGEGLSEPRSRRPRIIRCLMTHNKGVSFSLAASIDASPALCAPST 229
V S W ALL++CPG GLS + A S SP LC
Sbjct: 4052 VDSLWSVAQALLVLCPGTGLS--------------------TLCPAESWHLSPLLCVGL- 4090
Query: 230 GWDMPWILMLLLTMGQGVVILALSIVLWR-QRVRGAPGRDASIPQFKPEIQVY 281
W L L + G VIL WR +RG R A PQ ++++
Sbjct: 4091 -----WALRLWGALRLGAVILR-----WRYHALRGELYRPAWEPQDYEMVELF 4133
>gi|4502687 CD84 molecule [Homo sapiens]
Length = 328
Score = 30.4 bits (67), Expect = 2.0
Identities = 27/85 (31%), Positives = 37/85 (43%), Gaps = 7/85 (8%)
Query: 82 RLRLLG-NYSLWLEGSKEEDAGRYWCAVLGQHHNY-----QNWRVYDVLVLKGSQLSARA 135
R+ LG NY+L + + EDAG Y + Q Y N ++Y L S A
Sbjct: 84 RIHALGPNYNLVISDLRMEDAGDYKADINTQADPYTTTKRYNLQIYRRLGKPKITQSLMA 143
Query: 136 ADGSPCNV-LLCSVVPSRRMDSVTW 159
+ S CNV L CSV + + W
Sbjct: 144 SVNSTCNVTLTCSVEKEEKNVTYNW 168
>gi|117306178 hypothetical protein LOC55731 [Homo sapiens]
Length = 562
Score = 30.4 bits (67), Expect = 2.0
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Query: 25 VALGEAVELPCPSPPTLHGDEH-LSWFCSPAAGSFTTLVAQVQVGRPAP 72
+ L A L PP L H ++ FC AG TT V + Q+ P+P
Sbjct: 249 IPLSMAATLQHSQPPDLSSIVHQINQFCQTRAGISTTSVCEGQIANPSP 297
>gi|117306174 hypothetical protein LOC55731 [Homo sapiens]
Length = 562
Score = 30.4 bits (67), Expect = 2.0
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Query: 25 VALGEAVELPCPSPPTLHGDEH-LSWFCSPAAGSFTTLVAQVQVGRPAP 72
+ L A L PP L H ++ FC AG TT V + Q+ P+P
Sbjct: 249 IPLSMAATLQHSQPPDLSSIVHQINQFCQTRAGISTTSVCEGQIANPSP 297
>gi|224458284 Rho GTPase activating protein 23 [Homo sapiens]
Length = 1397
Score = 30.0 bits (66), Expect = 2.6
Identities = 17/57 (29%), Positives = 24/57 (42%)
Query: 53 PAAGSFTTLVAQVQVGRPAPDPGKPGRESRLRLLGNYSLWLEGSKEEDAGRYWCAVL 109
P+ G+F L ++ + R P+PG SRL S WL AG C +
Sbjct: 158 PSPGAFPHLSSEPRTPRAFPEPGSRVPPSRLECQQALSHWLSNQVPRRAGERRCPAM 214
>gi|68161541 carcinoembryonic antigen-related cell adhesion molecule
1 isoform 2 precursor [Homo sapiens]
Length = 464
Score = 30.0 bits (66), Expect = 2.6
Identities = 14/32 (43%), Positives = 16/32 (50%)
Query: 77 PGRESRLRLLGNYSLWLEGSKEEDAGRYWCAV 108
P E GN +L + K EDAG YWC V
Sbjct: 367 PSSERMKLSQGNTTLSINPVKREDAGTYWCEV 398
>gi|19923195 carcinoembryonic antigen-related cell adhesion molecule
1 isoform 1 precursor [Homo sapiens]
Length = 526
Score = 30.0 bits (66), Expect = 2.6
Identities = 14/32 (43%), Positives = 16/32 (50%)
Query: 77 PGRESRLRLLGNYSLWLEGSKEEDAGRYWCAV 108
P E GN +L + K EDAG YWC V
Sbjct: 367 PSSERMKLSQGNTTLSINPVKREDAGTYWCEV 398
>gi|20127422 Down syndrome cell adhesion molecule isoform CHD2-42
precursor [Homo sapiens]
Length = 2012
Score = 30.0 bits (66), Expect = 2.6
Identities = 18/58 (31%), Positives = 26/58 (44%)
Query: 51 CSPAAGSFTTLVAQVQVGRPAPDPGKPGRESRLRLLGNYSLWLEGSKEEDAGRYWCAV 108
CS T+V + G P R+++L N SL ++ EED+G Y C V
Sbjct: 711 CSAEGYPVPTIVWKFSKGAGVPQFQPIALNGRIQVLSNGSLLIKHVVEEDSGYYLCKV 768
>gi|34932496 butyrophilin, subfamily 3, member A2 precursor [Homo
sapiens]
Length = 334
Score = 30.0 bits (66), Expect = 2.6
Identities = 60/253 (23%), Positives = 89/253 (35%), Gaps = 33/253 (13%)
Query: 23 IYVALGEAVELPCPSPPTLHGDE-HLSWFCSPAAGSFTTLVAQVQVGRPAPDPGKP---G 78
I +GE +LPC PT+ + L W S S +V G+ D G
Sbjct: 40 ILAMVGEDADLPCHLFPTMSAETMELKWVSS----SLRQVVNVYADGKEVEDRQSAPYRG 95
Query: 79 RESRLR---LLGNYSLWLEGSKEEDAGRYWCAVLGQHHNYQNWRVYDVLVLKGSQLSARA 135
R S LR G +L + D+G+Y C Y+ V + GS L
Sbjct: 96 RTSILRDGITAGKAALRIHNVTASDSGKYLC-YFQDGDFYEKALVELKVAALGSNLHVEV 154
Query: 136 ADGSPCNV-LLCSVVPSRRMDSVTWQEGKGPVRGRVQSFWGSEAALLLVCPGEGLSE--- 191
+ L C + W KG V++ +V G GL E
Sbjct: 155 KGYEDGGIHLECRSTGWYPQPQIQWSNAKGENIPAVEA--------PVVADGVGLYEVAA 206
Query: 192 ---PRSRRPRIIRCLMTHNKGVSFSLAASIDASPALCAPSTGWDMPWILMLLLTMGQGVV 248
R + C++ ++ L AS ++ P PWI L T+ ++
Sbjct: 207 SVIMRGGSGEGVSCIIRNS-----LLGLEKTASISIADPFFRSAQPWIAALAGTLPILLL 261
Query: 249 ILA-LSIVLWRQR 260
+LA S LWRQ+
Sbjct: 262 LLAGASYFLWRQQ 274
>gi|166197658 butyrophilin, subfamily 1, member A1 [Homo sapiens]
Length = 526
Score = 30.0 bits (66), Expect = 2.6
Identities = 61/255 (23%), Positives = 94/255 (36%), Gaps = 37/255 (14%)
Query: 21 QAIYVALGEAVELPCPSPPTLHGDE-HLSWF---CSPAAGSFTTLVAQVQVGRPAPDPGK 76
+ I +GE ELPC P + L WF SPA V + GR
Sbjct: 36 EPILAVVGEDAELPCRLSPNASAEHLELRWFRKKVSPA-------VLVHRDGREQEAEQM 88
Query: 77 PGRESRLRLL------GNYSLWLEGSKEEDAGRYWCAVLGQHHNYQNWRVYDVLVLKGS- 129
P R L+ G +L + G + D G Y C + +Y+ V+ + GS
Sbjct: 89 PEYRGRATLVQDGIAKGRVALRIRGVRVSDDGEYTC-FFREDGSYEEALVHLKVAALGSD 147
Query: 130 -QLSARAAD-GSPCNVLLCSVVPSRRMDSVTWQEGKG-PVRGRVQSFWGSEAALLLVCPG 186
+S + + G C L C+ V V W+ KG +S E L V
Sbjct: 148 PHISMQVQENGEIC--LECTSVGWYPEPQVQWRTSKGEKFPSTSESRNPDEEGLFTVAAS 205
Query: 187 EGLSEPRSRRPR--IIRCLMTHNKGVSFSLAASIDASPALCAPSTGWDMPWIL-MLLLTM 243
+ + ++ I L+ K V S+ AS + P L PWI+ + ++ M
Sbjct: 206 VIIRDTSAKNVSCYIQNLLLGQEKKVEISIPAS--SLPRL--------TPWIVAVAVILM 255
Query: 244 GQGVVILALSIVLWR 258
G++ + WR
Sbjct: 256 VLGLLTIGSIFFTWR 270
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.137 0.446
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,738,955
Number of Sequences: 37866
Number of extensions: 703768
Number of successful extensions: 2057
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 1978
Number of HSP's gapped (non-prelim): 117
length of query: 297
length of database: 18,247,518
effective HSP length: 102
effective length of query: 195
effective length of database: 14,385,186
effective search space: 2805111270
effective search space used: 2805111270
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.