Guide to the Human Genome
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Name: ZDHHC20 Sequence: fasta or formatted (354aa) NCBI GI: 49457851
Description:

zinc finger, DHHC-type containing 20

Referenced in:

Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1         18           2
 C cysteine            4.0         14           2
 D aspartate           2.5          9           1
 E glutamate           6.2         22           2
 F phenylalanine       9.0         32           2
 G glycine             4.8         17           1
 H histidine           2.0          7           2
 I isoleucine          4.0         14           1
 K lysine              5.1         18           2
 L leucine             9.3         33           2
 M methionine          1.7          6           1
 N asparagine          4.2         15           2
 P proline             4.2         15           1
 Q glutamine           2.8         10           2
 R arginine            4.5         16           2
 S serine              9.3         33           2
 T threonine           5.1         18           2
 V valine              7.9         28           3
 W tryptophan          3.4         12           1
 Y tyrosine            4.8         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger, DHHC-type containing 20 
ZDHHC2                0.636   zinc finger, DHHC-type containing 2 
ZDHHC15               0.512   zinc finger, DHHC-type containing 15 isoform 1 [Homo...
ZDHHC15               0.502   zinc finger, DHHC-type containing 15 isoform 2 [Hom...
ZDHHC15               0.136   zinc finger, DHHC-type containing 15 isoform 3 [Hom...
ZDHHC5                0.115   zinc finger, DHHC domain containing 5 
ZDHHC16               0.107   Abl-philin 2 isoform 2 
ZDHHC8                0.105   zinc finger, DHHC domain containing 8 
ZDHHC14               0.104   zinc finger, DHHC-type containing 14 isoform 1 [Homo...
ZDHHC14               0.104   zinc finger, DHHC-type containing 14 isoform 2 [Homo...
ZDHHC7                0.104   zinc finger, DHHC-type containing 7 isoform 2 [Homo...
ZDHHC16               0.104   Abl-philin 2 isoform 4 
ZDHHC3                0.104   zinc finger, DHHC-type containing 3 isoform 1 [Homo...
ZDHHC3                0.102   zinc finger, DHHC-type containing 3 isoform 3 [Homo...
ZDHHC9                0.100   zinc finger, DHHC domain containing 9 
ZDHHC9                0.100   zinc finger, DHHC domain containing 9 
ZDHHC3                0.100   zinc finger, DHHC-type containing 3 isoform 2 
ZDHHC18               0.100   zinc finger, DHHC-type containing 18 
ZDHHC16               0.098   Abl-philin 2 isoform 1 
ZDHHC16               0.098   Abl-philin 2 isoform 1 
ZDHHC7                0.098   zinc finger, DHHC-type containing 7 isoform 1 [Homo...
ZDHHC6                0.089   zinc finger, DHHC-type containing 6 
ZDHHC12               0.080   zinc finger, DHHC domain containing 12 
ZDHHC21               0.079   zinc finger, DHHC-type containing 21 
ZDHHC19               0.076   zinc finger, DHHC domain containing 19 
ZDHHC23               0.073   zinc finger, DHHC domain containing 23 
ZDHHC17               0.069   huntingtin interacting protein 14 
ZDHHC4                0.069   zinc finger, DHHC-type containing 4 
ZDHHC4                0.069   zinc finger, DHHC-type containing 4 
ZDHHC4                0.069   zinc finger, DHHC-type containing 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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