Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 50593008
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|50593008 transmembrane BAX inhibitor motif containing 1
[Homo sapiens]
(311 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|50593008 transmembrane BAX inhibitor motif containing 1 [Homo... 647 0.0
gi|34101290 Fas apoptotic inhibitory molecule 2 [Homo sapiens] 294 8e-80
gi|57165375 glutamate receptor, ionotropic, N-methyl D-aspartate... 252 3e-67
gi|57165373 glutamate receptor, ionotropic, N-methyl D-aspartate... 252 3e-67
gi|116812579 transmembrane BAX inhibitor motif containing 4 [Hom... 110 2e-24
gi|8922157 proline rich 13 isoform 1 [Homo sapiens] 55 6e-08
gi|4809279 annexin VII isoform 2 [Homo sapiens] 51 1e-06
gi|4502111 annexin VII isoform 1 [Homo sapiens] 51 1e-06
gi|150417989 cyclin K isoform 1 [Homo sapiens] 48 1e-05
gi|4557317 annexin A11 [Homo sapiens] 46 5e-05
gi|22165433 annexin A11 [Homo sapiens] 46 5e-05
gi|22165431 annexin A11 [Homo sapiens] 46 5e-05
gi|32895368 alpha 1 type VIII collagen precursor [Homo sapiens] 44 1e-04
gi|17738302 alpha 1 type VIII collagen precursor [Homo sapiens] 44 1e-04
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 44 2e-04
gi|56117844 synovial sarcoma translocation, chromosome 18 isofor... 44 2e-04
gi|55741677 SET domain containing 1A [Homo sapiens] 44 2e-04
gi|21536320 heterogeneous nuclear ribonucleoprotein U-like 1 iso... 43 3e-04
gi|21536326 heterogeneous nuclear ribonucleoprotein U-like 1 iso... 43 3e-04
gi|162329583 cleavage and polyadenylation specific factor 6, 68 ... 43 4e-04
gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens] 43 4e-04
gi|56117846 synovial sarcoma translocation, chromosome 18 isofor... 42 5e-04
gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens] 42 7e-04
gi|10863877 phospholipid scramblase 1 [Homo sapiens] 42 7e-04
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] 42 0.001
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens] 42 0.001
gi|11386183 WAS protein family, member 2 [Homo sapiens] 41 0.001
gi|115430223 galectin 3 [Homo sapiens] 41 0.001
gi|24308073 protein tyrosine phosphatase, non-receptor type 23 [... 41 0.001
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 41 0.001
>gi|50593008 transmembrane BAX inhibitor motif containing 1 [Homo
sapiens]
Length = 311
Score = 647 bits (1669), Expect = 0.0
Identities = 311/311 (100%), Positives = 311/311 (100%)
Query: 1 MSNPSAPPPYEDRNPLYPGPPPPGGYGQPSVLPGGYPAYPGYPQPGYGHPAGYPQPMPPT 60
MSNPSAPPPYEDRNPLYPGPPPPGGYGQPSVLPGGYPAYPGYPQPGYGHPAGYPQPMPPT
Sbjct: 1 MSNPSAPPPYEDRNPLYPGPPPPGGYGQPSVLPGGYPAYPGYPQPGYGHPAGYPQPMPPT 60
Query: 61 HPMPMNYGPGHGYDGEERAVSDSFGPGEWDDRKVRHTFIRKVYSIISVQLLITVAIIAIF 120
HPMPMNYGPGHGYDGEERAVSDSFGPGEWDDRKVRHTFIRKVYSIISVQLLITVAIIAIF
Sbjct: 61 HPMPMNYGPGHGYDGEERAVSDSFGPGEWDDRKVRHTFIRKVYSIISVQLLITVAIIAIF 120
Query: 121 TFVEPVSAFVRRNVAVYYVSYAVFVVTYLILACCQGPRRRFPWNIILLTLFTFAMGFMTG 180
TFVEPVSAFVRRNVAVYYVSYAVFVVTYLILACCQGPRRRFPWNIILLTLFTFAMGFMTG
Sbjct: 121 TFVEPVSAFVRRNVAVYYVSYAVFVVTYLILACCQGPRRRFPWNIILLTLFTFAMGFMTG 180
Query: 181 TISSMYQTKAVIIAMIITAVVSISVTIFCFQTKVDFTSCTGLFCVLGIVLLVTGIVTSIV 240
TISSMYQTKAVIIAMIITAVVSISVTIFCFQTKVDFTSCTGLFCVLGIVLLVTGIVTSIV
Sbjct: 181 TISSMYQTKAVIIAMIITAVVSISVTIFCFQTKVDFTSCTGLFCVLGIVLLVTGIVTSIV 240
Query: 241 LYFQYVYWLHMLYAALGAICFTLFLAYDTQLVLGNRKHTISPEDYITGALQIYTDIIYIF 300
LYFQYVYWLHMLYAALGAICFTLFLAYDTQLVLGNRKHTISPEDYITGALQIYTDIIYIF
Sbjct: 241 LYFQYVYWLHMLYAALGAICFTLFLAYDTQLVLGNRKHTISPEDYITGALQIYTDIIYIF 300
Query: 301 TFVLQLMGDRN 311
TFVLQLMGDRN
Sbjct: 301 TFVLQLMGDRN 311
>gi|34101290 Fas apoptotic inhibitory molecule 2 [Homo sapiens]
Length = 316
Score = 294 bits (752), Expect = 8e-80
Identities = 152/291 (52%), Positives = 197/291 (67%), Gaps = 8/291 (2%)
Query: 26 YGQPSVLPGGYPAYPGYPQP--GYGHPAGYPQPMP---PTHPMPMNYGPGHG--YD-GEE 77
+G+ P A P Y + G G AG P P P HP P YD G
Sbjct: 22 HGEKKEAPAVPSAPPSYEEATSGEGMKAGAFPPAPTAVPLHPSWAYVDPSSSSSYDNGFP 81
Query: 78 RAVSDSFGPGEWDDRKVRHTFIRKVYSIISVQLLITVAIIAIFTFVEPVSAFVRRNVAVY 137
+ F WDD+KVR F+RKVY+I+ +QLL+T+A++A+FTF +PV +V+ N Y
Sbjct: 82 TGDHELFTTFSWDDQKVRRVFVRKVYTILLIQLLVTLAVVALFTFCDPVKDYVQANPGWY 141
Query: 138 YVSYAVFVVTYLILACCQGPRRRFPWNIILLTLFTFAMGFMTGTISSMYQTKAVIIAMII 197
+ SYAVF TYL LACC GPRR FPWN+ILLT+FT +M ++TG +SS Y T +V++ + I
Sbjct: 142 WASYAVFFATYLTLACCSGPRRHFPWNLILLTVFTLSMAYLTGMLSSYYNTTSVLLCLGI 201
Query: 198 TAVVSISVTIFCFQTKVDFTSCTGLFCVLGIVLLVTGIVTSIVLYFQYVYWLHMLYAALG 257
TA+V +SVT+F FQTK DFTSC G+ VL + L +G++ +I+L FQYV WLH +YAALG
Sbjct: 202 TALVCLSVTVFSFQTKFDFTSCQGVLFVLLMTLFFSGLILAILLPFQYVPWLHAVYAALG 261
Query: 258 AICFTLFLAYDTQLVLGNRKHTISPEDYITGALQIYTDIIYIFTFVLQLMG 308
A FTLFLA DTQL++GNR+H++SPE+YI GAL IY DIIYIFTF LQL G
Sbjct: 262 AGVFTLFLALDTQLLMGNRRHSLSPEEYIFGALNIYLDIIYIFTFFLQLFG 312
>gi|57165375 glutamate receptor, ionotropic, N-methyl
D-aspartate-associated protein 1 [Homo sapiens]
Length = 371
Score = 252 bits (644), Expect = 3e-67
Identities = 141/327 (43%), Positives = 195/327 (59%), Gaps = 27/327 (8%)
Query: 4 PSAPPPY-EDRNPLYPGPPPPGGYGQPSVLPGGYPAYPGYPQPGYGH----PAGYPQPMP 58
P P PY + P P P P GGY Q GGYP P YPQ GY GYPQ
Sbjct: 46 PFQPSPYGQPGYPHGPSPYPQGGYPQGPYPQGGYPQGP-YPQEGYPQGPYPQGGYPQGPY 104
Query: 59 PTHPMPMN-YG------------PGHGYDGEERAVS----DSFGPGEWDDRKVRHTFIRK 101
P P P N YG P HG EE S F WDD+ +R FIRK
Sbjct: 105 PQSPFPPNPYGQPQVFPGQDPDSPQHGNYQEEGPPSYYDNQDFPATNWDDKSIRQAFIRK 164
Query: 102 VYSIISVQLLITVAIIAIFTFVEPVSAFVRRNVAVYYVSYAVFVVTYLILACCQGPRRRF 161
V+ ++++QL +T++ +++FTFV V FVR NV YYVSYAVF ++ ++L+CC RR+
Sbjct: 165 VFLVLTLQLSVTLSTVSVFTFVAEVKGFVRENVWTYYVSYAVFFISLIVLSCCGDFRRKH 224
Query: 162 PWNIILLTLFTFAMGFMTGTISSMYQTKAVIIAMIITAVVSISVTIFCFQTKVDFTSCTG 221
PWN++ L++ T ++ +M G I+S Y T+AVI+A+ IT V +V IF QT+ DFTSC G
Sbjct: 225 PWNLVALSVLTASLSYMVGMIASFYNTEAVIMAVGITTAVCFTVVIFSMQTRYDFTSCMG 284
Query: 222 LFCVLGIVLLVTGIVTSIVLYFQYVYWLHMLYAALGAICFTLFLAYDTQLVLGNRKHTIS 281
+ V +VL + +I+ F L ++YA+LGA+ FT FLA DTQL+LGN++ ++S
Sbjct: 285 VLLVSMVVL----FIFAILCIFIRNRILEIVYASLGALLFTCFLAVDTQLLLGNKQLSLS 340
Query: 282 PEDYITGALQIYTDIIYIFTFVLQLMG 308
PE+Y+ AL +YTDII IF ++L ++G
Sbjct: 341 PEEYVFAALNLYTDIINIFLYILTIIG 367
Score = 34.3 bits (77), Expect = 0.15
Identities = 23/58 (39%), Positives = 24/58 (41%), Gaps = 17/58 (29%)
Query: 17 YPGPPPPGGYGQPSVLPGGYPAYPGYPQPGYGHP--AGYPQPMPPTHPMPMNYG-PGH 71
YP P P GYP P P P Y P G P P PP P P YG PG+
Sbjct: 14 YPPPNP------------GYPGGPQPPMPPYAQPPYPGAPYPQPPFQPSP--YGQPGY 57
>gi|57165373 glutamate receptor, ionotropic, N-methyl
D-aspartate-associated protein 1 [Homo sapiens]
Length = 371
Score = 252 bits (644), Expect = 3e-67
Identities = 141/327 (43%), Positives = 195/327 (59%), Gaps = 27/327 (8%)
Query: 4 PSAPPPY-EDRNPLYPGPPPPGGYGQPSVLPGGYPAYPGYPQPGYGH----PAGYPQPMP 58
P P PY + P P P P GGY Q GGYP P YPQ GY GYPQ
Sbjct: 46 PFQPSPYGQPGYPHGPSPYPQGGYPQGPYPQGGYPQGP-YPQEGYPQGPYPQGGYPQGPY 104
Query: 59 PTHPMPMN-YG------------PGHGYDGEERAVS----DSFGPGEWDDRKVRHTFIRK 101
P P P N YG P HG EE S F WDD+ +R FIRK
Sbjct: 105 PQSPFPPNPYGQPQVFPGQDPDSPQHGNYQEEGPPSYYDNQDFPATNWDDKSIRQAFIRK 164
Query: 102 VYSIISVQLLITVAIIAIFTFVEPVSAFVRRNVAVYYVSYAVFVVTYLILACCQGPRRRF 161
V+ ++++QL +T++ +++FTFV V FVR NV YYVSYAVF ++ ++L+CC RR+
Sbjct: 165 VFLVLTLQLSVTLSTVSVFTFVAEVKGFVRENVWTYYVSYAVFFISLIVLSCCGDFRRKH 224
Query: 162 PWNIILLTLFTFAMGFMTGTISSMYQTKAVIIAMIITAVVSISVTIFCFQTKVDFTSCTG 221
PWN++ L++ T ++ +M G I+S Y T+AVI+A+ IT V +V IF QT+ DFTSC G
Sbjct: 225 PWNLVALSVLTASLSYMVGMIASFYNTEAVIMAVGITTAVCFTVVIFSMQTRYDFTSCMG 284
Query: 222 LFCVLGIVLLVTGIVTSIVLYFQYVYWLHMLYAALGAICFTLFLAYDTQLVLGNRKHTIS 281
+ V +VL + +I+ F L ++YA+LGA+ FT FLA DTQL+LGN++ ++S
Sbjct: 285 VLLVSMVVL----FIFAILCIFIRNRILEIVYASLGALLFTCFLAVDTQLLLGNKQLSLS 340
Query: 282 PEDYITGALQIYTDIIYIFTFVLQLMG 308
PE+Y+ AL +YTDII IF ++L ++G
Sbjct: 341 PEEYVFAALNLYTDIINIFLYILTIIG 367
Score = 34.3 bits (77), Expect = 0.15
Identities = 23/58 (39%), Positives = 24/58 (41%), Gaps = 17/58 (29%)
Query: 17 YPGPPPPGGYGQPSVLPGGYPAYPGYPQPGYGHP--AGYPQPMPPTHPMPMNYG-PGH 71
YP P P GYP P P P Y P G P P PP P P YG PG+
Sbjct: 14 YPPPNP------------GYPGGPQPPMPPYAQPPYPGAPYPQPPFQPSP--YGQPGY 57
>gi|116812579 transmembrane BAX inhibitor motif containing 4 [Homo
sapiens]
Length = 238
Score = 110 bits (274), Expect = 2e-24
Identities = 67/217 (30%), Positives = 116/217 (53%), Gaps = 17/217 (7%)
Query: 94 VRHTFIRKVYSIISVQLLITVAIIAIFTFVEPVSAFVRRNVA--VYYVSYAVFVVTYLIL 151
+R F+RKVYSI+S+Q+L+T +F + E V FV + A + + ++ ++ LIL
Sbjct: 30 IRMAFLRKVYSILSLQVLLTTVTSTVFLYFESVRTFVHESPALILLFALGSLGLIFALIL 89
Query: 152 ACCQGPRRRFPWNIILLTLFTFAMGFMTGTISSMYQTKAVIIAMIITAVVSISVTIFCFQ 211
R ++P N+ LL FT + + Y ++ A I+T V +T++ Q
Sbjct: 90 -----NRHKYPLNLYLLFGFTLLEALTVAVVVTFYDVYIILQAFILTTTVFFGLTVYTLQ 144
Query: 212 TKVDFTSC-TGLFCVLGIVLLVTGIVTSIVLYFQYVYWLHMLYAALGAICFTLFLAYDTQ 270
+K DF+ GLF +L I+ L + + +F Y + ++ AA GA+ F F+ YDT
Sbjct: 145 SKKDFSKFGAGLFALLWILCL-----SGFLKFFFYSEIMELVLAAAGALLFCGFIIYDTH 199
Query: 271 LVLGNRKHTISPEDYITGALQIYTDIIYIFTFVLQLM 307
++ H +SPE+Y+ A+ +Y DII +F +L+ +
Sbjct: 200 SLM----HKLSPEEYVLAAISLYLDIINLFLHLLRFL 232
>gi|8922157 proline rich 13 isoform 1 [Homo sapiens]
Length = 148
Score = 55.5 bits (132), Expect = 6e-08
Identities = 33/65 (50%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 2 SNPSAPPPYEDRNPLYPGPPPPGG-YGQPSVLPGGYPAYPGYPQPGYG--HPAG-YPQPM 57
SNP+ PPP P P PPPPG +G P+ PGG P +P PQPGY P G YP P
Sbjct: 24 SNPAHPPPINPPFPPGPCPPPPGAPHGNPAFPPGG-PPHP-VPQPGYPGCQPLGPYPPPY 81
Query: 58 PPTHP 62
PP P
Sbjct: 82 PPPAP 86
>gi|4809279 annexin VII isoform 2 [Homo sapiens]
Length = 488
Score = 50.8 bits (120), Expect = 1e-06
Identities = 38/102 (37%), Positives = 45/102 (44%), Gaps = 18/102 (17%)
Query: 4 PSAPP-------PYEDRNPLYPGPPPPGGYGQPSVLPGGYPAYPGYPQP-GYGHPAGYP- 54
P PP P + P G PP GG P V GYP GYP P GY P GYP
Sbjct: 15 PGYPPAGQESSFPPSGQYPYPSGFPPMGGGAYPQVPSSGYPGAGGYPAPGGYPAPGGYPG 74
Query: 55 QPMP---PTHP-MPMNYG-----PGHGYDGEERAVSDSFGPG 87
P P P++P +P G G G+ G + S S+G G
Sbjct: 75 APQPGGAPSYPGVPPGQGFGVPPGGAGFSGYPQPPSQSYGGG 116
Score = 42.4 bits (98), Expect = 5e-04
Identities = 33/86 (38%), Positives = 38/86 (44%), Gaps = 12/86 (13%)
Query: 4 PSAPPPYEDRNPLYPGPPPPGGYGQPSVLPGGYPAYPGYPQPGYGHPAGYPQPMP----- 58
P AP P P YPG PP G+G P PGG + GYPQP G P +P
Sbjct: 73 PGAPQP--GGAPSYPGVPPGQGFGVP---PGG-AGFSGYPQPPSQSYGGGPAQVPLPGGF 126
Query: 59 PTHPMPMNYGPGHGYDGEERAVSDSF 84
P MP Y PG + +DSF
Sbjct: 127 PGGQMPSQY-PGGQPTYPSQINTDSF 151
Score = 35.4 bits (80), Expect = 0.065
Identities = 23/61 (37%), Positives = 27/61 (44%), Gaps = 10/61 (16%)
Query: 29 PSVLPGGYPAYPGYPQPGYGHPAGYPQPMPPT--HPMPMNYGPGHGYDGEERAVSDSFGP 86
P P GYP +PGYP PAG PP+ +P P + P G G V S P
Sbjct: 4 PGYPPTGYPPFPGYP------PAGQESSFPPSGQYPYPSGFPPMGG--GAYPQVPSSGYP 55
Query: 87 G 87
G
Sbjct: 56 G 56
>gi|4502111 annexin VII isoform 1 [Homo sapiens]
Length = 466
Score = 50.8 bits (120), Expect = 1e-06
Identities = 38/102 (37%), Positives = 45/102 (44%), Gaps = 18/102 (17%)
Query: 4 PSAPP-------PYEDRNPLYPGPPPPGGYGQPSVLPGGYPAYPGYPQP-GYGHPAGYP- 54
P PP P + P G PP GG P V GYP GYP P GY P GYP
Sbjct: 15 PGYPPAGQESSFPPSGQYPYPSGFPPMGGGAYPQVPSSGYPGAGGYPAPGGYPAPGGYPG 74
Query: 55 QPMP---PTHP-MPMNYG-----PGHGYDGEERAVSDSFGPG 87
P P P++P +P G G G+ G + S S+G G
Sbjct: 75 APQPGGAPSYPGVPPGQGFGVPPGGAGFSGYPQPPSQSYGGG 116
Score = 42.0 bits (97), Expect = 7e-04
Identities = 29/72 (40%), Positives = 32/72 (44%), Gaps = 11/72 (15%)
Query: 4 PSAPPPYEDRNPLYPGPPPPGGYGQPSVLPGGYPAYPGYPQPGYGHPAGYPQPMP----- 58
P AP P P YPG PP G+G P PGG + GYPQP G P +P
Sbjct: 73 PGAPQP--GGAPSYPGVPPGQGFGVP---PGG-AGFSGYPQPPSQSYGGGPAQVPLPGGF 126
Query: 59 PTHPMPMNYGPG 70
P MP Y G
Sbjct: 127 PGGQMPSQYPGG 138
Score = 35.4 bits (80), Expect = 0.065
Identities = 23/61 (37%), Positives = 27/61 (44%), Gaps = 10/61 (16%)
Query: 29 PSVLPGGYPAYPGYPQPGYGHPAGYPQPMPPT--HPMPMNYGPGHGYDGEERAVSDSFGP 86
P P GYP +PGYP PAG PP+ +P P + P G G V S P
Sbjct: 4 PGYPPTGYPPFPGYP------PAGQESSFPPSGQYPYPSGFPPMGG--GAYPQVPSSGYP 55
Query: 87 G 87
G
Sbjct: 56 G 56
Score = 29.6 bits (65), Expect = 3.6
Identities = 15/26 (57%), Positives = 16/26 (61%), Gaps = 3/26 (11%)
Query: 21 PPPGGY--GQ-PSVLPGGYPAYPGYP 43
P PGG+ GQ PS PGG P YP P
Sbjct: 121 PLPGGFPGGQMPSQYPGGQPTYPSQP 146
>gi|150417989 cyclin K isoform 1 [Homo sapiens]
Length = 580
Score = 47.8 bits (112), Expect = 1e-05
Identities = 26/72 (36%), Positives = 34/72 (47%), Gaps = 7/72 (9%)
Query: 4 PSAPPPYEDRNPLYPGPPPPGGYGQPSVLPGGYPAYPGYPQPGYGHPAGYPQP---MPPT 60
P P Y P P PPPP + P++ P PGYP P + +P P +PPT
Sbjct: 472 PYHPHVYPPNPPPPPVPPPPASFPPPAI----PPPTPGYPPPPPTYNPNFPPPPPRLPPT 527
Query: 61 HPMPMNYGPGHG 72
H +P + PG G
Sbjct: 528 HAVPPHPPPGLG 539
Score = 37.4 bits (85), Expect = 0.017
Identities = 25/65 (38%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
Query: 4 PSAPPPYEDRNPLYPGPPP--PGGYGQPSVLPGGYPAYPG-YPQPGYGHPAGYPQPMPPT 60
P PPP NP +P PPP P + P P G P YP P P G P PP
Sbjct: 504 PGYPPPPPTYNPNFPPPPPRLPPTHAVPPHPPPGLGLPPASYPPPAVP-PGGQPPVPPPI 562
Query: 61 HPMPM 65
P M
Sbjct: 563 PPPGM 567
Score = 36.6 bits (83), Expect = 0.029
Identities = 21/53 (39%), Positives = 24/53 (45%), Gaps = 9/53 (16%)
Query: 3 NPSAPPPYEDRNPLYPGPP--------PPGGYGQPSVLPGGYPAY-PGYPQPG 46
NP+ PPP P + PP PP Y P+V PGG P P P PG
Sbjct: 514 NPNFPPPPPRLPPTHAVPPHPPPGLGLPPASYPPPAVPPGGQPPVPPPIPPPG 566
Score = 33.5 bits (75), Expect = 0.25
Identities = 23/62 (37%), Positives = 23/62 (37%), Gaps = 2/62 (3%)
Query: 8 PPYEDRNPLYPGPPPPGGYGQPSVLPGGYPAYPGYPQPGYGHPAGYPQPMPPTHPMPMNY 67
P Y P Y GPP Y P V P P P P P P P P P P P Y
Sbjct: 456 PSYGALPPAY-GPPAHLPY-HPHVYPPNPPPPPVPPPPASFPPPAIPPPTPGYPPPPPTY 513
Query: 68 GP 69
P
Sbjct: 514 NP 515
Score = 31.6 bits (70), Expect = 0.94
Identities = 26/94 (27%), Positives = 32/94 (34%), Gaps = 29/94 (30%)
Query: 4 PSAPPPYEDRNPLYPGPPPP-------------------GGYGQPSVLPGGYPAYPGYPQ 44
P+ P P PL PPPP G S++ P+Y P
Sbjct: 404 PAHPAPVHQPPPLPHRPPPPPPSSYMTGMSTTSSYMSGEGYQSLQSMMKTEGPSYGALP- 462
Query: 45 PGYGHPAGYP---------QPMPPTHPMPMNYGP 69
P YG PA P P PP P P ++ P
Sbjct: 463 PAYGPPAHLPYHPHVYPPNPPPPPVPPPPASFPP 496
>gi|4557317 annexin A11 [Homo sapiens]
Length = 505
Score = 45.8 bits (107), Expect = 5e-05
Identities = 28/74 (37%), Positives = 30/74 (40%), Gaps = 19/74 (25%)
Query: 16 LYPGPP-------PPGGYGQPSVLPGGYPAYPGYPQPGYGHPAGYP------------QP 56
LYPG P PPGG+GQP P Y YP PG P+ P QP
Sbjct: 73 LYPGAPGAGYPPVPPGGFGQPPSAQQPVPPYGMYPPPGGNPPSRMPSYPPYPGAPVPGQP 132
Query: 57 MPPTHPMPMNYGPG 70
MPP P PG
Sbjct: 133 MPPPGQQPPGAYPG 146
Score = 42.4 bits (98), Expect = 5e-04
Identities = 27/58 (46%), Positives = 30/58 (51%), Gaps = 9/58 (15%)
Query: 7 PPPYEDRNPLYPGPPPPGGYGQPSV-LPGGY---PAYPGYPQPGYGHPAGYPQPMPPT 60
PPP + YPG PP GQP V LPG P+YPGYP G PA +PPT
Sbjct: 134 PPPGQQPPGAYPGQPPVTYPGQPPVPLPGQQQPVPSYPGYPGSGTVTPA-----VPPT 186
Score = 40.4 bits (93), Expect = 0.002
Identities = 32/73 (43%), Positives = 35/73 (47%), Gaps = 13/73 (17%)
Query: 4 PSAPPPYEDRNPLYPGPPPPGGYGQPSVLPGGYP--AYPGYPQPGYGHPAGYPQPMP-PT 60
PS P Y P YPG P PG QP PG P AYPG QP +P P P+P
Sbjct: 114 PSRMPSY----PPYPGAPVPG---QPMPPPGQQPPGAYPG--QPPVTYPGQPPVPLPGQQ 164
Query: 61 HPMPMNYG-PGHG 72
P+P G PG G
Sbjct: 165 QPVPSYPGYPGSG 177
Score = 36.2 bits (82), Expect = 0.038
Identities = 29/102 (28%), Positives = 33/102 (32%), Gaps = 43/102 (42%)
Query: 1 MSNPSAPPPYEDRNPLYPG---------PPPP---------------------------- 23
MS P PPP P PG PPPP
Sbjct: 1 MSYPGYPPPPGGYPPAAPGGGPWGGAAYPPPPSMPPIGLDNVATYAGQFNQDYLSGMAAN 60
Query: 24 -----GGYGQPSVLPGGYPA-YPGYPQPGYGHPAGYPQPMPP 59
GG P++ PG A YP P G+G P QP+PP
Sbjct: 61 MSGTFGGANMPNLYPGAPGAGYPPVPPGGFGQPPSAQQPVPP 102
>gi|22165433 annexin A11 [Homo sapiens]
Length = 505
Score = 45.8 bits (107), Expect = 5e-05
Identities = 28/74 (37%), Positives = 30/74 (40%), Gaps = 19/74 (25%)
Query: 16 LYPGPP-------PPGGYGQPSVLPGGYPAYPGYPQPGYGHPAGYP------------QP 56
LYPG P PPGG+GQP P Y YP PG P+ P QP
Sbjct: 73 LYPGAPGAGYPPVPPGGFGQPPSAQQPVPPYGMYPPPGGNPPSRMPSYPPYPGAPVPGQP 132
Query: 57 MPPTHPMPMNYGPG 70
MPP P PG
Sbjct: 133 MPPPGQQPPGAYPG 146
Score = 42.4 bits (98), Expect = 5e-04
Identities = 27/58 (46%), Positives = 30/58 (51%), Gaps = 9/58 (15%)
Query: 7 PPPYEDRNPLYPGPPPPGGYGQPSV-LPGGY---PAYPGYPQPGYGHPAGYPQPMPPT 60
PPP + YPG PP GQP V LPG P+YPGYP G PA +PPT
Sbjct: 134 PPPGQQPPGAYPGQPPVTYPGQPPVPLPGQQQPVPSYPGYPGSGTVTPA-----VPPT 186
Score = 40.4 bits (93), Expect = 0.002
Identities = 32/73 (43%), Positives = 35/73 (47%), Gaps = 13/73 (17%)
Query: 4 PSAPPPYEDRNPLYPGPPPPGGYGQPSVLPGGYP--AYPGYPQPGYGHPAGYPQPMP-PT 60
PS P Y P YPG P PG QP PG P AYPG QP +P P P+P
Sbjct: 114 PSRMPSY----PPYPGAPVPG---QPMPPPGQQPPGAYPG--QPPVTYPGQPPVPLPGQQ 164
Query: 61 HPMPMNYG-PGHG 72
P+P G PG G
Sbjct: 165 QPVPSYPGYPGSG 177
Score = 36.2 bits (82), Expect = 0.038
Identities = 29/102 (28%), Positives = 33/102 (32%), Gaps = 43/102 (42%)
Query: 1 MSNPSAPPPYEDRNPLYPG---------PPPP---------------------------- 23
MS P PPP P PG PPPP
Sbjct: 1 MSYPGYPPPPGGYPPAAPGGGPWGGAAYPPPPSMPPIGLDNVATYAGQFNQDYLSGMAAN 60
Query: 24 -----GGYGQPSVLPGGYPA-YPGYPQPGYGHPAGYPQPMPP 59
GG P++ PG A YP P G+G P QP+PP
Sbjct: 61 MSGTFGGANMPNLYPGAPGAGYPPVPPGGFGQPPSAQQPVPP 102
>gi|22165431 annexin A11 [Homo sapiens]
Length = 505
Score = 45.8 bits (107), Expect = 5e-05
Identities = 28/74 (37%), Positives = 30/74 (40%), Gaps = 19/74 (25%)
Query: 16 LYPGPP-------PPGGYGQPSVLPGGYPAYPGYPQPGYGHPAGYP------------QP 56
LYPG P PPGG+GQP P Y YP PG P+ P QP
Sbjct: 73 LYPGAPGAGYPPVPPGGFGQPPSAQQPVPPYGMYPPPGGNPPSRMPSYPPYPGAPVPGQP 132
Query: 57 MPPTHPMPMNYGPG 70
MPP P PG
Sbjct: 133 MPPPGQQPPGAYPG 146
Score = 42.4 bits (98), Expect = 5e-04
Identities = 27/58 (46%), Positives = 30/58 (51%), Gaps = 9/58 (15%)
Query: 7 PPPYEDRNPLYPGPPPPGGYGQPSV-LPGGY---PAYPGYPQPGYGHPAGYPQPMPPT 60
PPP + YPG PP GQP V LPG P+YPGYP G PA +PPT
Sbjct: 134 PPPGQQPPGAYPGQPPVTYPGQPPVPLPGQQQPVPSYPGYPGSGTVTPA-----VPPT 186
Score = 40.4 bits (93), Expect = 0.002
Identities = 32/73 (43%), Positives = 35/73 (47%), Gaps = 13/73 (17%)
Query: 4 PSAPPPYEDRNPLYPGPPPPGGYGQPSVLPGGYP--AYPGYPQPGYGHPAGYPQPMP-PT 60
PS P Y P YPG P PG QP PG P AYPG QP +P P P+P
Sbjct: 114 PSRMPSY----PPYPGAPVPG---QPMPPPGQQPPGAYPG--QPPVTYPGQPPVPLPGQQ 164
Query: 61 HPMPMNYG-PGHG 72
P+P G PG G
Sbjct: 165 QPVPSYPGYPGSG 177
Score = 36.2 bits (82), Expect = 0.038
Identities = 29/102 (28%), Positives = 33/102 (32%), Gaps = 43/102 (42%)
Query: 1 MSNPSAPPPYEDRNPLYPG---------PPPP---------------------------- 23
MS P PPP P PG PPPP
Sbjct: 1 MSYPGYPPPPGGYPPAAPGGGPWGGAAYPPPPSMPPIGLDNVATYAGQFNQDYLSGMAAN 60
Query: 24 -----GGYGQPSVLPGGYPA-YPGYPQPGYGHPAGYPQPMPP 59
GG P++ PG A YP P G+G P QP+PP
Sbjct: 61 MSGTFGGANMPNLYPGAPGAGYPPVPPGGFGQPPSAQQPVPP 102
>gi|32895368 alpha 1 type VIII collagen precursor [Homo sapiens]
Length = 744
Score = 44.3 bits (103), Expect = 1e-04
Identities = 35/91 (38%), Positives = 36/91 (39%), Gaps = 19/91 (20%)
Query: 2 SNPSAPP--PYEDRNPLYPGPPPPGGYGQPSVL-------------PGGYPAYPGYPQPG 46
S P PP P P PGPP G G+P V P G P PG P P
Sbjct: 506 SGPIGPPGIPGPKGEPGLPGPPGFPGIGKPGVAGLHGPPGKPGALGPQGQPGLPGPPGPP 565
Query: 47 YGHPAGYPQPMPPTHPMPMNYGP--GHGYDG 75
P G P MPPT P Y P G G DG
Sbjct: 566 --GPPGPPAVMPPTPPPQGEYLPDMGLGIDG 594
Score = 34.3 bits (77), Expect = 0.15
Identities = 19/41 (46%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 18 PGPP-PPGGYGQPSVLPGGYPAYPGYPQP-GYGHPAGYPQP 56
PGP PPG +G P + G P PG P P G P G P P
Sbjct: 193 PGPQGPPGPHGLPGIGKPGGPGLPGQPGPKGDRGPKGLPGP 233
Score = 30.8 bits (68), Expect = 1.6
Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
Query: 4 PSAPPPYEDRNPLYPGPPPPGGYGQPSVLPG--GYPAYPGYPQPGYGHPAG 52
P P +D P PG P GG G+ LPG G P PG +PG+ P G
Sbjct: 313 PGIGKPGQDGIPGQPGFP--GGKGEQG-LPGLPGPPGLPGIGKPGFPGPKG 360
Score = 30.4 bits (67), Expect = 2.1
Identities = 29/83 (34%), Positives = 33/83 (39%), Gaps = 12/83 (14%)
Query: 15 PLYPGPP----PPGGYGQPSVLPGGYPAYPGYPQPGYGHPA--GYPQPMPPTHPMPMNYG 68
P GPP PPG G P V G +PG PQ G P G P P P +P G
Sbjct: 251 PGVKGPPGMHGPPGPVGLPGVGKPGVTGFPG-PQGPLGKPGAPGEPGPQGPI-GVPGVQG 308
Query: 69 ----PGHGYDGEERAVSDSFGPG 87
PG G G++ PG
Sbjct: 309 PPGIPGIGKPGQDGIPGQPGFPG 331
Score = 29.6 bits (65), Expect = 3.6
Identities = 28/86 (32%), Positives = 29/86 (33%), Gaps = 19/86 (22%)
Query: 4 PSAPPPYEDRN-PLYPGPPPPGGYGQPSVLPGGYPAYPGYP-------------QPGYGH 49
P PP P G P P GY P V G P PG P Q G
Sbjct: 131 PPGPPGLPGHGIPGIKGKPGPQGY--PGVGKPGMPGMPGKPGAMGMPGAKGEIGQKGEIG 188
Query: 50 PAGYPQPMPPTHPMPMNYGPGHGYDG 75
P G P P P P + PG G G
Sbjct: 189 PMGIPGPQGPPGPHGL---PGIGKPG 211
>gi|17738302 alpha 1 type VIII collagen precursor [Homo sapiens]
Length = 744
Score = 44.3 bits (103), Expect = 1e-04
Identities = 35/91 (38%), Positives = 36/91 (39%), Gaps = 19/91 (20%)
Query: 2 SNPSAPP--PYEDRNPLYPGPPPPGGYGQPSVL-------------PGGYPAYPGYPQPG 46
S P PP P P PGPP G G+P V P G P PG P P
Sbjct: 506 SGPIGPPGIPGPKGEPGLPGPPGFPGIGKPGVAGLHGPPGKPGALGPQGQPGLPGPPGPP 565
Query: 47 YGHPAGYPQPMPPTHPMPMNYGP--GHGYDG 75
P G P MPPT P Y P G G DG
Sbjct: 566 --GPPGPPAVMPPTPPPQGEYLPDMGLGIDG 594
Score = 34.3 bits (77), Expect = 0.15
Identities = 19/41 (46%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 18 PGPP-PPGGYGQPSVLPGGYPAYPGYPQP-GYGHPAGYPQP 56
PGP PPG +G P + G P PG P P G P G P P
Sbjct: 193 PGPQGPPGPHGLPGIGKPGGPGLPGQPGPKGDRGPKGLPGP 233
Score = 30.8 bits (68), Expect = 1.6
Identities = 21/51 (41%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
Query: 4 PSAPPPYEDRNPLYPGPPPPGGYGQPSVLPG--GYPAYPGYPQPGYGHPAG 52
P P +D P PG P GG G+ LPG G P PG +PG+ P G
Sbjct: 313 PGIGKPGQDGIPGQPGFP--GGKGEQG-LPGLPGPPGLPGIGKPGFPGPKG 360
Score = 30.4 bits (67), Expect = 2.1
Identities = 29/83 (34%), Positives = 33/83 (39%), Gaps = 12/83 (14%)
Query: 15 PLYPGPP----PPGGYGQPSVLPGGYPAYPGYPQPGYGHPA--GYPQPMPPTHPMPMNYG 68
P GPP PPG G P V G +PG PQ G P G P P P +P G
Sbjct: 251 PGVKGPPGMHGPPGPVGLPGVGKPGVTGFPG-PQGPLGKPGAPGEPGPQGPI-GVPGVQG 308
Query: 69 ----PGHGYDGEERAVSDSFGPG 87
PG G G++ PG
Sbjct: 309 PPGIPGIGKPGQDGIPGQPGFPG 331
Score = 29.6 bits (65), Expect = 3.6
Identities = 28/86 (32%), Positives = 29/86 (33%), Gaps = 19/86 (22%)
Query: 4 PSAPPPYEDRN-PLYPGPPPPGGYGQPSVLPGGYPAYPGYP-------------QPGYGH 49
P PP P G P P GY P V G P PG P Q G
Sbjct: 131 PPGPPGLPGHGIPGIKGKPGPQGY--PGVGKPGMPGMPGKPGAMGMPGAKGEIGQKGEIG 188
Query: 50 PAGYPQPMPPTHPMPMNYGPGHGYDG 75
P G P P P P + PG G G
Sbjct: 189 PMGIPGPQGPPGPHGL---PGIGKPG 211
>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
sapiens]
Length = 309
Score = 43.9 bits (102), Expect = 2e-04
Identities = 28/64 (43%), Positives = 28/64 (43%), Gaps = 9/64 (14%)
Query: 4 PSAPPPYEDRNPLYP-------GPPPPGG-YGQPSVLPGGYPAYPGYPQPGYGHPAGYPQ 55
P PPP E P P GPPPPGG QP P G P P P P G P PQ
Sbjct: 246 PQGPPPQEGNKPQRPPPPGRPQGPPPPGGNPQQPLPPPAGKPQGPP-PPPQGGRPHRPPQ 304
Query: 56 PMPP 59
PP
Sbjct: 305 GQPP 308
Score = 35.8 bits (81), Expect = 0.050
Identities = 23/62 (37%), Positives = 26/62 (41%), Gaps = 7/62 (11%)
Query: 2 SNPSAPPPYEDRNPLYPGPPPPGGYGQPSVLPGGYPAYP----GYPQPGYGHPAGYPQPM 57
+ P PPP+ + GPPP G P G P P G PQ PAG PQ
Sbjct: 234 NKPQGPPPHPGKPQ---GPPPQEGNKPQRPPPPGRPQGPPPPGGNPQQPLPPPAGKPQGP 290
Query: 58 PP 59
PP
Sbjct: 291 PP 292
Score = 33.5 bits (75), Expect = 0.25
Identities = 25/72 (34%), Positives = 28/72 (38%), Gaps = 6/72 (8%)
Query: 3 NPSAPPPYEDRNPLYPGPPPPGGYGQPSVLPGGYPAYPGYPQPGYGHPAGYPQPMP--PT 60
N S PP P GPPP GG S P +P P P P G+ + P P P P
Sbjct: 150 NQSQGPPPRPGKP--EGPPPQGG--NQSQGPPPHPGKPEGPPPQGGNQSQGPPPRPGKPE 205
Query: 61 HPMPMNYGPGHG 72
P P G
Sbjct: 206 GPPPQGGNQSQG 217
Score = 33.5 bits (75), Expect = 0.25
Identities = 26/73 (35%), Positives = 28/73 (38%), Gaps = 7/73 (9%)
Query: 4 PSAPPPYEDRNPLYPGPPPPGGYGQPSV---LPGGYPAYPGYPQ---PGYGH-PAGYPQP 56
P PPP P P P G PS P G P +PG PQ P G+ P P P
Sbjct: 204 PEGPPPQGGNQSQGPPPRPGKPEGPPSQGGNKPQGPPPHPGKPQGPPPQEGNKPQRPPPP 263
Query: 57 MPPTHPMPMNYGP 69
P P P P
Sbjct: 264 GRPQGPPPPGGNP 276
Score = 32.0 bits (71), Expect = 0.72
Identities = 25/72 (34%), Positives = 27/72 (37%), Gaps = 6/72 (8%)
Query: 3 NPSAPPPYEDRNPLYPGPPPPGGYGQPSVLPGGYPAYPGYPQPGYGHPAGYPQPMP--PT 60
N S PP P GPPP GG S P P P P P G+ + P P P P
Sbjct: 108 NQSQGPPPRPGKP--EGPPPQGG--NQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPE 163
Query: 61 HPMPMNYGPGHG 72
P P G
Sbjct: 164 GPPPQGGNQSQG 175
Score = 32.0 bits (71), Expect = 0.72
Identities = 26/70 (37%), Positives = 27/70 (38%), Gaps = 6/70 (8%)
Query: 4 PSAPPPYEDRNPLYPGPPPPGGYGQPSVLPGGYPAY---PGYPQPGYGHPAGYP-QPMPP 59
P PP P P PP PG P G P PG PQ G P G P QP+PP
Sbjct: 225 PEGPPSQGGNKPQGP-PPHPGKPQGPPPQEGNKPQRPPPPGRPQ-GPPPPGGNPQQPLPP 282
Query: 60 THPMPMNYGP 69
P P
Sbjct: 283 PAGKPQGPPP 292
Score = 31.6 bits (70), Expect = 0.94
Identities = 25/72 (34%), Positives = 27/72 (37%), Gaps = 6/72 (8%)
Query: 3 NPSAPPPYEDRNPLYPGPPPPGGYGQPSVLPGGYPAYPGYPQPGYGHPAGYPQPMP--PT 60
N S PP P GPPP GG S P P P P P G+ + P P P P
Sbjct: 129 NQSQGPPPRPGKP--EGPPPQGG--NQSQGPPPRPGKPEGPPPQGGNQSQGPPPHPGKPE 184
Query: 61 HPMPMNYGPGHG 72
P P G
Sbjct: 185 GPPPQGGNQSQG 196
Score = 31.6 bits (70), Expect = 0.94
Identities = 23/71 (32%), Positives = 27/71 (38%), Gaps = 6/71 (8%)
Query: 4 PSAPPPYEDRN----PLYPGPP--PPGGYGQPSVLPGGYPAYPGYPQPGYGHPAGYPQPM 57
P PPP P +PG P PP G S P P P P P G+ + P P
Sbjct: 162 PEGPPPQGGNQSQGPPPHPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPR 221
Query: 58 PPTHPMPMNYG 68
P P + G
Sbjct: 222 PGKPEGPPSQG 232
Score = 30.8 bits (68), Expect = 1.6
Identities = 24/77 (31%), Positives = 26/77 (33%), Gaps = 8/77 (10%)
Query: 4 PSAPPPYEDRNPLYPGPPPPGGYGQP------SVLPGGYPAYPGYPQPGYGHPAGYPQPM 57
P PPP P P P GQP S P P P P P G+ + P P
Sbjct: 78 PEGPPPQGGNQSQGPPPRPGKPEGQPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPR 137
Query: 58 P--PTHPMPMNYGPGHG 72
P P P P G
Sbjct: 138 PGKPEGPPPQGGNQSQG 154
Score = 30.4 bits (67), Expect = 2.1
Identities = 23/76 (30%), Positives = 24/76 (31%), Gaps = 11/76 (14%)
Query: 4 PSAPPPYEDRNPLYPGP-------PPPGGYGQPSVLPGGYPAYPGYPQPGYGHPAGYPQP 56
P PPP P P PPP G Q G P PG P+ PQ
Sbjct: 183 PEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQ----GPPPRPGKPEGPPSQGGNKPQG 238
Query: 57 MPPTHPMPMNYGPGHG 72
PP P P G
Sbjct: 239 PPPHPGKPQGPPPQEG 254
>gi|56117844 synovial sarcoma translocation, chromosome 18 isoform 2
[Homo sapiens]
Length = 387
Score = 43.5 bits (101), Expect = 2e-04
Identities = 26/72 (36%), Positives = 28/72 (38%), Gaps = 5/72 (6%)
Query: 4 PSAPPPYEDRNPLYPGPPPPGGYGQPSVLPGGYPAYPGYPQPGYGHPAGYPQPMPPTHPM 63
P Y + Y GPPP GY G YPG Q GYG G P P P +P
Sbjct: 292 PDGNSQYGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPG-QQQGYGPSQGGPGPQYPNYPQ 350
Query: 64 PMNYGPGHGYDG 75
G G Y G
Sbjct: 351 ----GQGQQYGG 358
Score = 41.2 bits (95), Expect = 0.001
Identities = 30/75 (40%), Positives = 33/75 (44%), Gaps = 11/75 (14%)
Query: 7 PPP---YEDRNPLYPG----PPPPGGYGQPSVLPGGYPAYPGYPQPGYGHPAGYPQPMPP 59
PPP Y + YPG P GYG PG P YP YPQ G G G +P P
Sbjct: 308 PPPQQGYPPQQQQYPGQQGYPGQQQGYGPSQGGPG--PQYPNYPQ-GQGQQYGGYRPTQP 364
Query: 60 THPMPMNYGPGHGYD 74
P P P +GYD
Sbjct: 365 GPPQPPQQRP-YGYD 378
Score = 31.2 bits (69), Expect = 1.2
Identities = 22/55 (40%), Positives = 23/55 (41%), Gaps = 9/55 (16%)
Query: 7 PPPYEDRNPLYPGPPP-----PGGYGQPSVLPGGY-PAYPGYPQPGYGHPAGYPQ 55
P + P GP P P G GQ GGY P PG PQP P GY Q
Sbjct: 328 PGQQQGYGPSQGGPGPQYPNYPQGQGQQY---GGYRPTQPGPPQPPQQRPYGYDQ 379
>gi|55741677 SET domain containing 1A [Homo sapiens]
Length = 1707
Score = 43.5 bits (101), Expect = 2e-04
Identities = 31/77 (40%), Positives = 35/77 (45%), Gaps = 15/77 (19%)
Query: 2 SNPSAPPPYEDRNPLYPGPPPPGGYGQPSVLPGGYPAY-PGY---PQPGYGHPAGYPQPM 57
S P AP P + P P PPPP Y + LP GYP + P Y P+P P YP P
Sbjct: 593 SPPPAPTPPQQPPPPPPPPPPPPPY--LASLPLGYPPHQPAYLLPPRPDGPPPPEYPPPP 650
Query: 58 PPTHPMPMNYGPGHGYD 74
PP P H YD
Sbjct: 651 PP---------PPHIYD 658
>gi|21536320 heterogeneous nuclear ribonucleoprotein U-like 1
isoform d [Homo sapiens]
Length = 756
Score = 43.1 bits (100), Expect = 3e-04
Identities = 30/87 (34%), Positives = 35/87 (40%), Gaps = 17/87 (19%)
Query: 4 PSAPPPYEDRNPLYPGPPPPGGYGQPSVLPGGY------------PAYPGYPQPGY---G 48
P PPP +P PP Y + S +PG P P Y QP Y G
Sbjct: 608 PQQPPPPPSYSPAR-NPPGASTYNKNSNIPGSSANTSTPTVSSYSPPQPSYSQPPYNQGG 666
Query: 49 HPAGYPQPMPPTHPMP-MNYGPGHGYD 74
+ GY P PP P P NYG GY+
Sbjct: 667 YSQGYTAPPPPPPPPPAYNYGSYGGYN 693
Score = 34.3 bits (77), Expect = 0.15
Identities = 25/78 (32%), Positives = 29/78 (37%), Gaps = 16/78 (20%)
Query: 5 SAPPPYEDRNPLYPGPPPP-------GGYGQPSVLPGGYPAYPGYPQPGYGHPAGYPQPM 57
+APPP P PPPP GGY P P YPQP Y Y Q
Sbjct: 672 TAPPP--------PPPPPPAYNYGSYGGYNPAPYTPPPPPTAQTYPQPSYNQYQQYAQQW 723
Query: 58 PPTHPMPMNYGPGHG-YD 74
+ + P +G YD
Sbjct: 724 NQYYQNQGQWPPYYGNYD 741
Score = 29.3 bits (64), Expect = 4.7
Identities = 22/60 (36%), Positives = 24/60 (40%), Gaps = 16/60 (26%)
Query: 21 PPPGGYGQPSVLPGGY------PAYPGYPQPGYGH-------PAGYPQPMPP---THPMP 64
PP Y QP GGY P P P P Y + PA Y P PP T+P P
Sbjct: 652 PPQPSYSQPPYNQGGYSQGYTAPPPPPPPPPAYNYGSYGGYNPAPYTPPPPPTAQTYPQP 711
>gi|21536326 heterogeneous nuclear ribonucleoprotein U-like 1
isoform a [Homo sapiens]
Length = 856
Score = 43.1 bits (100), Expect = 3e-04
Identities = 30/87 (34%), Positives = 35/87 (40%), Gaps = 17/87 (19%)
Query: 4 PSAPPPYEDRNPLYPGPPPPGGYGQPSVLPGGY------------PAYPGYPQPGY---G 48
P PPP +P PP Y + S +PG P P Y QP Y G
Sbjct: 708 PQQPPPPPSYSPAR-NPPGASTYNKNSNIPGSSANTSTPTVSSYSPPQPSYSQPPYNQGG 766
Query: 49 HPAGYPQPMPPTHPMP-MNYGPGHGYD 74
+ GY P PP P P NYG GY+
Sbjct: 767 YSQGYTAPPPPPPPPPAYNYGSYGGYN 793
Score = 34.3 bits (77), Expect = 0.15
Identities = 25/78 (32%), Positives = 29/78 (37%), Gaps = 16/78 (20%)
Query: 5 SAPPPYEDRNPLYPGPPPP-------GGYGQPSVLPGGYPAYPGYPQPGYGHPAGYPQPM 57
+APPP P PPPP GGY P P YPQP Y Y Q
Sbjct: 772 TAPPP--------PPPPPPAYNYGSYGGYNPAPYTPPPPPTAQTYPQPSYNQYQQYAQQW 823
Query: 58 PPTHPMPMNYGPGHG-YD 74
+ + P +G YD
Sbjct: 824 NQYYQNQGQWPPYYGNYD 841
Score = 29.3 bits (64), Expect = 4.7
Identities = 22/60 (36%), Positives = 24/60 (40%), Gaps = 16/60 (26%)
Query: 21 PPPGGYGQPSVLPGGY------PAYPGYPQPGYGH-------PAGYPQPMPP---THPMP 64
PP Y QP GGY P P P P Y + PA Y P PP T+P P
Sbjct: 752 PPQPSYSQPPYNQGGYSQGYTAPPPPPPPPPAYNYGSYGGYNPAPYTPPPPPTAQTYPQP 811
>gi|162329583 cleavage and polyadenylation specific factor 6, 68 kD
subunit [Homo sapiens]
Length = 551
Score = 42.7 bits (99), Expect = 4e-04
Identities = 28/67 (41%), Positives = 32/67 (47%), Gaps = 13/67 (19%)
Query: 5 SAPPPYEDRNP---LYPGPPPPGGYGQPSVLPGGYPAYPGYPQPGYGHPAGYPQPM---- 57
+ PP DR P L+PG P +GQP + G P P P PGYG P G P P
Sbjct: 264 AGPPNRGDRPPPPVLFPGQP----FGQPPL--GPLPPGPPPPVPGYGPPPGPPPPQQGPP 317
Query: 58 PPTHPMP 64
PP P P
Sbjct: 318 PPPGPFP 324
Score = 37.7 bits (86), Expect = 0.013
Identities = 31/88 (35%), Positives = 34/88 (38%), Gaps = 17/88 (19%)
Query: 2 SNPSAPPPYEDRNPLYPGPP--PPGGYGQPSVLPGGY---PAYPGYPQPG---------Y 47
+ P PPP P PP PPG G P P G P G P G
Sbjct: 221 AGPGGPPPPFPAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFP 280
Query: 48 GHPAGYPQ--PMPPTHPMPM-NYGPGHG 72
G P G P P+PP P P+ YGP G
Sbjct: 281 GQPFGQPPLGPLPPGPPPPVPGYGPPPG 308
Score = 35.8 bits (81), Expect = 0.050
Identities = 34/101 (33%), Positives = 37/101 (36%), Gaps = 26/101 (25%)
Query: 4 PSAPPPYEDRNPLYPGPPPPGGYGQPSVLPGGYPAYPGYP--------QPGY--GHPAGY 53
P PPP P PGPPPP P PG +P P P P + G P G
Sbjct: 294 PGPPPPVPGYGPP-PGPPPPQQGPPPP--PGPFPPRPPGPLGPPLTLAPPPHLPGPPPGA 350
Query: 54 PQPMPPTHPM----PMNYGPGHGYDGEERAVSDSFGPGEWD 90
P P P +P P N G SDS GP D
Sbjct: 351 PPPAPHVNPAFFPPPTNSG---------MPTSDSRGPPPTD 382
Score = 31.6 bits (70), Expect = 0.94
Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 8/50 (16%)
Query: 17 YPGPPPPGGYGQPSVLPGGYPAYPGYPQPGYGHPA--GYPQPMPPTHPMP 64
+PGP PGG P +PA P+P G P G P P PP +P
Sbjct: 217 FPGPAGPGGPPPP------FPAGQTPPRPPLGPPGPPGPPGPPPPGQVLP 260
Score = 28.9 bits (63), Expect = 6.1
Identities = 19/61 (31%), Positives = 22/61 (36%), Gaps = 24/61 (39%)
Query: 4 PSAPPPYEDRNPLY--------------PGPPPPGGYGQPSVLPGGYPAYPGYPQPGYGH 49
P APPP NP + GPPP YG+P P Y + YG
Sbjct: 348 PGAPPPAPHVNPAFFPPPTNSGMPTSDSRGPPPTDPYGRP----------PPYDRGDYGP 397
Query: 50 P 50
P
Sbjct: 398 P 398
>gi|5032069 splicing factor 3b, subunit 4 [Homo sapiens]
Length = 424
Score = 42.7 bits (99), Expect = 4e-04
Identities = 29/74 (39%), Positives = 33/74 (44%), Gaps = 18/74 (24%)
Query: 7 PPPYEDRNPLYPGPPPPGGYGQPSVLPGGYPAYPGYPQPGYGHPAGYPQPMPPTHPM--P 64
PPP +PGPPP G + P G P +G P G+P PMPP H M P
Sbjct: 333 PPPRPPPGMPHPGPPPMG------MPPRG---------PPFGSPMGHPGPMPP-HGMRGP 376
Query: 65 MNYGPGHGYDGEER 78
P HGY G R
Sbjct: 377 PPLMPPHGYTGPPR 390
Score = 38.1 bits (87), Expect = 0.010
Identities = 28/75 (37%), Positives = 37/75 (49%), Gaps = 10/75 (13%)
Query: 1 MSNPSAPPPYEDRNPL-YPGPPPPGGY-GQPSVLPGGYPAYPGYPQ-PGYGHPAGYPQPM 57
M P PP+ +P+ +PGP PP G G P ++P Y G P+ P YG+ G P+
Sbjct: 349 MGMPPRGPPFG--SPMGHPGPMPPHGMRGPPPLMPP--HGYTGPPRPPPYGYQRG---PL 401
Query: 58 PPTHPMPMNYGPGHG 72
PP P P P G
Sbjct: 402 PPPRPTPRPPVPPRG 416
Score = 36.2 bits (82), Expect = 0.038
Identities = 28/81 (34%), Positives = 34/81 (41%), Gaps = 17/81 (20%)
Query: 5 SAPPPYEDRNPLYPG-----PPPP-----GGYGQPSVLPGGYPAYPGYPQPGYGHPAGYP 54
S PPP L PG PPPP G+G PS G P G+P G+ HP +P
Sbjct: 242 SFPPPVPPPGALPPGIPPAMPPPPMPPGAAGHGPPSA---GTPG-AGHPGHGHSHPHPFP 297
Query: 55 ---QPMPPTHPMPMNYGPGHG 72
P P M + + HG
Sbjct: 298 PGGMPHPGMSQMQLAHHGPHG 318
Score = 34.3 bits (77), Expect = 0.15
Identities = 33/98 (33%), Positives = 38/98 (38%), Gaps = 28/98 (28%)
Query: 6 APPPYEDRNP----LYPGPPPPGGYGQPSVLPGGYPAYPGYPQPGYGHPAGYPQPMPPTH 61
APPP NP L G PPPG P PG +P P P PG P +PP
Sbjct: 214 APPPPSAPNPVVSSLGSGLPPPG---MPP--PGSFP--PPVPPPG-----ALPPGIPPAM 261
Query: 62 PMP------MNYG------PGHGYDGEERAVSDSFGPG 87
P P +G PG G+ G + F PG
Sbjct: 262 PPPPMPPGAAGHGPPSAGTPGAGHPGHGHSHPHPFPPG 299
Score = 33.5 bits (75), Expect = 0.25
Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 4/54 (7%)
Query: 16 LYPGPPPPGGYGQPSVLPGGYPAYPGYPQPGYGHPAGYPQPMPPTHPMPMNYGP 69
L+ PPP P V G G P PG P +P P+PP +P P
Sbjct: 210 LFADAPPPPSAPNPVVSSLG----SGLPPPGMPPPGSFPPPVPPPGALPPGIPP 259
Score = 33.5 bits (75), Expect = 0.25
Identities = 28/92 (30%), Positives = 31/92 (33%), Gaps = 27/92 (29%)
Query: 4 PSAPPPYEDRNPLYPGPPPPG---------GYGQPSVLPGGYPAYPGYPQP--------G 46
P+ PPP GPP G G+ P P G +PG Q G
Sbjct: 259 PAMPPPPMPPGAAGHGPPSAGTPGAGHPGHGHSHPHPFPPGGMPHPGMSQMQLAHHGPHG 318
Query: 47 YGHP-------AGYPQPMPP---THPMPMNYG 68
GHP G P P PP HP P G
Sbjct: 319 LGHPHAGPPGSGGQPPPRPPPGMPHPGPPPMG 350
>gi|56117846 synovial sarcoma translocation, chromosome 18 isoform 1
[Homo sapiens]
Length = 418
Score = 42.4 bits (98), Expect = 5e-04
Identities = 25/66 (37%), Positives = 27/66 (40%), Gaps = 5/66 (7%)
Query: 10 YEDRNPLYPGPPPPGGYGQPSVLPGGYPAYPGYPQPGYGHPAGYPQPMPPTHPMPMNYGP 69
Y + Y GPPP GY G YPG Q GYG G P P P +P G
Sbjct: 329 YGQQQDAYQGPPPQQGYPPQQQQYPGQQGYPG-QQQGYGPSQGGPGPQYPNYPQ----GQ 383
Query: 70 GHGYDG 75
G Y G
Sbjct: 384 GQQYGG 389
Score = 41.2 bits (95), Expect = 0.001
Identities = 30/75 (40%), Positives = 33/75 (44%), Gaps = 11/75 (14%)
Query: 7 PPP---YEDRNPLYPG----PPPPGGYGQPSVLPGGYPAYPGYPQPGYGHPAGYPQPMPP 59
PPP Y + YPG P GYG PG P YP YPQ G G G +P P
Sbjct: 339 PPPQQGYPPQQQQYPGQQGYPGQQQGYGPSQGGPG--PQYPNYPQ-GQGQQYGGYRPTQP 395
Query: 60 THPMPMNYGPGHGYD 74
P P P +GYD
Sbjct: 396 GPPQPPQQRP-YGYD 409
Score = 31.2 bits (69), Expect = 1.2
Identities = 22/55 (40%), Positives = 23/55 (41%), Gaps = 9/55 (16%)
Query: 7 PPPYEDRNPLYPGPPP-----PGGYGQPSVLPGGY-PAYPGYPQPGYGHPAGYPQ 55
P + P GP P P G GQ GGY P PG PQP P GY Q
Sbjct: 359 PGQQQGYGPSQGGPGPQYPNYPQGQGQQY---GGYRPTQPGPPQPPQQRPYGYDQ 410
>gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens]
Length = 380
Score = 42.0 bits (97), Expect = 7e-04
Identities = 29/76 (38%), Positives = 32/76 (42%), Gaps = 10/76 (13%)
Query: 1 MSNPSAPP-PYEDRNPLYPGPPPPGGYGQPSVLPGGYPAYPGYPQPGYGHPAGYPQPMPP 59
+SN PP P P PGPPPP G P LP G P +G G PP
Sbjct: 156 VSNAGGPPAPPAGGPPPPPGPPPPPGPPPPPGLPPS-----GVPAAAHGAGGG----PPP 206
Query: 60 THPMPMNYGPGHGYDG 75
P+P GPG G G
Sbjct: 207 APPLPAAQGPGGGGAG 222
>gi|10863877 phospholipid scramblase 1 [Homo sapiens]
Length = 318
Score = 42.0 bits (97), Expect = 7e-04
Identities = 29/75 (38%), Positives = 32/75 (42%), Gaps = 14/75 (18%)
Query: 7 PPPYEDRNPLYPGP-----PPPGGYGQPSVLPGGYPA--YPGYPQPGYGHPAGYP-QPMP 58
PP Y YPGP PPP G+ P P G+P P Y QP Y P G P
Sbjct: 33 PPGYSG----YPGPQVSYPPPPAGHSGPG--PAGFPVPNQPVYNQPVYNQPVGAAGVPWM 86
Query: 59 PTHPMPMNYGPGHGY 73
P P+N PG Y
Sbjct: 87 PAPQPPLNCPPGLEY 101
Score = 38.1 bits (87), Expect = 0.010
Identities = 23/61 (37%), Positives = 27/61 (44%), Gaps = 12/61 (19%)
Query: 17 YPGPPPPGGYGQPSVLPGGYPAYPG----YPQPGYGH----PAGYPQPMPPTHPMPMNYG 68
YP PP + P GY YPG YP P GH PAG+P P P + P+
Sbjct: 21 YPPQYPPTAFQGPP----GYSGYPGPQVSYPPPPAGHSGPGPAGFPVPNQPVYNQPVYNQ 76
Query: 69 P 69
P
Sbjct: 77 P 77
>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
Length = 1263
Score = 41.6 bits (96), Expect = 0.001
Identities = 31/86 (36%), Positives = 33/86 (38%), Gaps = 20/86 (23%)
Query: 5 SAPPPYEDRNPLYPGPPPPGGYG--QPSVLPGGYPAYPGYPQPGYGH----------PAG 52
S PPP + P PP P G G PS LPGG P P PG AG
Sbjct: 631 SPPPPLSGDATIPPPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPPPPLPGSAG 690
Query: 53 YPQPMP--------PTHPMPMNYGPG 70
P P P P P P+ GPG
Sbjct: 691 IPPPPPPLPGEAGMPPPPPPLPGGPG 716
Score = 35.4 bits (80), Expect = 0.065
Identities = 28/72 (38%), Positives = 30/72 (41%), Gaps = 10/72 (13%)
Query: 4 PSAPPPYEDRNPLYPGPPP-PGGYGQPSVLPGGYPAYPGYPQP-----GYGHPAGYP-QP 56
P PPP + P PPP PG G P P P PG P P G G P P
Sbjct: 679 PPPPPPLPGSAGIPPPPPPLPGEAGMPPP-PPPLPGGPGIPPPPPFPGGPGIPPPPPGMG 737
Query: 57 MPPTHPMPMNYG 68
MPP P P +G
Sbjct: 738 MPP--PPPFGFG 747
Score = 34.3 bits (77), Expect = 0.15
Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 11/60 (18%)
Query: 5 SAPPPYEDRNPLYPGPPPPGGYGQPSVLPGGYPAYPGYPQPGYGHPAGYPQPMPPTHPMP 64
+ PP R P+ P PP PG G +++P P P G P P PP P P
Sbjct: 562 TVPPSVPSRAPVPPAPPLPGDSG--TIIP---------PPPAPGDSTTPPPPPPPPPPPP 610
Score = 34.3 bits (77), Expect = 0.15
Identities = 21/49 (42%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Query: 4 PSAPPPYEDRNPLYPGPPPPGGYGQPSVLPG-GYPAYPGYPQPGYGHPA 51
P PPP + P PP PGG G P PG G P P + G+G PA
Sbjct: 705 PPPPPPLPGGPGIPPPPPFPGGPGIPPPPPGMGMPPPPPF---GFGVPA 750
Score = 33.9 bits (76), Expect = 0.19
Identities = 25/65 (38%), Positives = 26/65 (40%), Gaps = 6/65 (9%)
Query: 7 PPPYEDRNPLYPGPPP-PGGYGQPSVLPGGYPAYPGYPQPGYGHPAGYPQPMPPTHPMPM 65
PPP + P PPP PG G P P P G P P P G P PP P
Sbjct: 669 PPPLPGSARIPPPPPPLPGSAGIPPP-PPPLPGEAGMPPPPPPLPGGPGIPPPP----PF 723
Query: 66 NYGPG 70
GPG
Sbjct: 724 PGGPG 728
Score = 32.0 bits (71), Expect = 0.72
Identities = 24/80 (30%), Positives = 28/80 (35%), Gaps = 15/80 (18%)
Query: 4 PSAPPPYEDRNPLYPGPPPPGGY----------GQPSVLPGGY-----PAYPGYPQPGYG 48
P APP D + P PP PG P LPGG P+ PG
Sbjct: 574 PPAPPLPGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAISPP 633
Query: 49 HPAGYPQPMPPTHPMPMNYG 68
P +PP P+P G
Sbjct: 634 PPLSGDATIPPPPPLPEGVG 653
>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
Length = 1272
Score = 41.6 bits (96), Expect = 0.001
Identities = 31/86 (36%), Positives = 33/86 (38%), Gaps = 20/86 (23%)
Query: 5 SAPPPYEDRNPLYPGPPPPGGYG--QPSVLPGGYPAYPGYPQPGYGH----------PAG 52
S PPP + P PP P G G PS LPGG P P PG AG
Sbjct: 640 SPPPPLSGDATIPPPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPPPPLPGSAG 699
Query: 53 YPQPMP--------PTHPMPMNYGPG 70
P P P P P P+ GPG
Sbjct: 700 IPPPPPPLPGEAGMPPPPPPLPGGPG 725
Score = 35.4 bits (80), Expect = 0.065
Identities = 28/72 (38%), Positives = 30/72 (41%), Gaps = 10/72 (13%)
Query: 4 PSAPPPYEDRNPLYPGPPP-PGGYGQPSVLPGGYPAYPGYPQP-----GYGHPAGYP-QP 56
P PPP + P PPP PG G P P P PG P P G G P P
Sbjct: 688 PPPPPPLPGSAGIPPPPPPLPGEAGMPPP-PPPLPGGPGIPPPPPFPGGPGIPPPPPGMG 746
Query: 57 MPPTHPMPMNYG 68
MPP P P +G
Sbjct: 747 MPP--PPPFGFG 756
Score = 34.3 bits (77), Expect = 0.15
Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 11/60 (18%)
Query: 5 SAPPPYEDRNPLYPGPPPPGGYGQPSVLPGGYPAYPGYPQPGYGHPAGYPQPMPPTHPMP 64
+ PP R P+ P PP PG G +++P P P G P P PP P P
Sbjct: 571 TVPPSVPSRAPVPPAPPLPGDSG--TIIP---------PPPAPGDSTTPPPPPPPPPPPP 619
Score = 34.3 bits (77), Expect = 0.15
Identities = 21/49 (42%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Query: 4 PSAPPPYEDRNPLYPGPPPPGGYGQPSVLPG-GYPAYPGYPQPGYGHPA 51
P PPP + P PP PGG G P PG G P P + G+G PA
Sbjct: 714 PPPPPPLPGGPGIPPPPPFPGGPGIPPPPPGMGMPPPPPF---GFGVPA 759
Score = 33.9 bits (76), Expect = 0.19
Identities = 25/65 (38%), Positives = 26/65 (40%), Gaps = 6/65 (9%)
Query: 7 PPPYEDRNPLYPGPPP-PGGYGQPSVLPGGYPAYPGYPQPGYGHPAGYPQPMPPTHPMPM 65
PPP + P PPP PG G P P P G P P P G P PP P
Sbjct: 678 PPPLPGSARIPPPPPPLPGSAGIPPP-PPPLPGEAGMPPPPPPLPGGPGIPPPP----PF 732
Query: 66 NYGPG 70
GPG
Sbjct: 733 PGGPG 737
Score = 32.0 bits (71), Expect = 0.72
Identities = 24/80 (30%), Positives = 28/80 (35%), Gaps = 15/80 (18%)
Query: 4 PSAPPPYEDRNPLYPGPPPPGGY----------GQPSVLPGGY-----PAYPGYPQPGYG 48
P APP D + P PP PG P LPGG P+ PG
Sbjct: 583 PPAPPLPGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGTAISPP 642
Query: 49 HPAGYPQPMPPTHPMPMNYG 68
P +PP P+P G
Sbjct: 643 PPLSGDATIPPPPPLPEGVG 662
>gi|11386183 WAS protein family, member 2 [Homo sapiens]
Length = 498
Score = 41.2 bits (95), Expect = 0.001
Identities = 26/82 (31%), Positives = 27/82 (32%), Gaps = 21/82 (25%)
Query: 4 PSAPPPYEDRNPLYPGPPPPGGYGQPSVLPGGYPA---------------------YPGY 42
P APPP P PPPP G+G P P P YP
Sbjct: 319 PPAPPPPPPPMIGIPPPPPPVGFGSPGTPPPPSPPSFPPHPDFAAPPPPPPPPAADYPTL 378
Query: 43 PQPGYGHPAGYPQPMPPTHPMP 64
P P P G P PP P P
Sbjct: 379 PPPPLSQPTGGAPPPPPPPPPP 400
Score = 37.0 bits (84), Expect = 0.022
Identities = 28/75 (37%), Positives = 32/75 (42%), Gaps = 12/75 (16%)
Query: 2 SNPSAPPPYEDRNPLYPGPPPPGGYGQPSVLPGGYPAYPGYPQPGYGHPAGYPQPMPPTH 61
S PS PP + P P PPP Y P++ P P QP G P P P PP
Sbjct: 351 SPPSFPPHPDFAAPPPPPPPPAADY--PTLPP------PPLSQPTGGAPPPPPPPPPPGP 402
Query: 62 PMPMNYGPGHGYDGE 76
P P P G DG+
Sbjct: 403 PPP----PFTGADGQ 413
Score = 33.5 bits (75), Expect = 0.25
Identities = 21/62 (33%), Positives = 25/62 (40%), Gaps = 11/62 (17%)
Query: 1 MSNPSAPPPYEDRNPLYPGPPPPGGYGQPSVLPGGYPAYPGYPQPGYGHPAGYPQPMPPT 60
+ +P P P P P PPPP G P P P G+G P P P PP+
Sbjct: 306 LGSPPGPKPGFAPPPAPPPPPPP---------MIGIPPPP--PPVGFGSPGTPPPPSPPS 354
Query: 61 HP 62
P
Sbjct: 355 FP 356
Score = 30.4 bits (67), Expect = 2.1
Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 8/33 (24%)
Query: 4 PSAPPPYEDRNPLYPGPPPP---GGYGQPSVLP 33
P PPP P PGPPPP G GQP++ P
Sbjct: 391 PPPPPP-----PPPPGPPPPPFTGADGQPAIPP 418
Score = 28.9 bits (63), Expect = 6.1
Identities = 27/86 (31%), Positives = 32/86 (37%), Gaps = 26/86 (30%)
Query: 5 SAPPPYEDRNPLYPGP--------PPPGGYGQP------SVLPGGY------PAYPGYPQ 44
S PPP + + P P PPP + P S L G P++P P
Sbjct: 245 SYPPPPQSDSASSPSPSFSEDNLPPPPAEFSYPVDNQRGSGLAGPKRSSVVSPSHPP-PA 303
Query: 45 PGYGHPAG-----YPQPMPPTHPMPM 65
P G P G P P PP P PM
Sbjct: 304 PPLGSPPGPKPGFAPPPAPPPPPPPM 329
>gi|115430223 galectin 3 [Homo sapiens]
Length = 250
Score = 41.2 bits (95), Expect = 0.001
Identities = 29/70 (41%), Positives = 31/70 (44%), Gaps = 10/70 (14%)
Query: 4 PSAPPP--YEDRNPLYPGPPPPGGYGQPSVLPGGYP------AYPGYPQPG-YGHPAGYP 54
P PP Y YPG P PG Y P PG YP A YP G YG PAG P
Sbjct: 55 PGQAPPGAYPGAPGAYPGAPAPGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAG-P 113
Query: 55 QPMPPTHPMP 64
+P P+P
Sbjct: 114 LIVPYNLPLP 123
Score = 40.8 bits (94), Expect = 0.002
Identities = 29/68 (42%), Positives = 32/68 (47%), Gaps = 12/68 (17%)
Query: 17 YPGPPPPGGY-GQ--PSVLPGGYPAYPGYPQPGY--GHPAG---YPQPMPPT----HPMP 64
YPG PPG Y GQ P PG AYPG P PG G P+G YP P+ +P
Sbjct: 45 YPGQAPPGAYPGQAPPGAYPGAPGAYPGAPAPGVYPGPPSGPGAYPSSGQPSATGAYPAT 104
Query: 65 MNYGPGHG 72
YG G
Sbjct: 105 GPYGAPAG 112
Score = 29.6 bits (65), Expect = 3.6
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 4/44 (9%)
Query: 20 PPPPGGYGQPSVLPGGYPAYPG--YP--QPGYGHPAGYPQPMPP 59
P P G G P G YPG YP PG P YP PP
Sbjct: 17 PNPQGWPGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPP 60
>gi|24308073 protein tyrosine phosphatase, non-receptor type 23
[Homo sapiens]
Length = 1636
Score = 41.2 bits (95), Expect = 0.001
Identities = 31/87 (35%), Positives = 39/87 (44%), Gaps = 28/87 (32%)
Query: 3 NPS-APPPYEDRNPLYPGPPP---------PGGYGQP--------SVLPGGYPAYPGYPQ 44
NP+ APPP P +P PPP P G QP S +P G+PA PQ
Sbjct: 900 NPTPAPPP-----PCFPVPPPQPLPTPYTYPAGAKQPIPAQHHFSSGIPAGFPAPRIGPQ 954
Query: 45 PGYGHPAGYPQ----PMPPTHPMPMNY 67
P HP +P P PP P+P+ +
Sbjct: 955 P-QPHPQPHPSQAFGPQPPQQPLPLQH 980
Score = 38.5 bits (88), Expect = 0.008
Identities = 27/70 (38%), Positives = 32/70 (45%), Gaps = 6/70 (8%)
Query: 4 PSAPPPYEDRNPLYPGPPPPGGYGQPSVLPGGYPAYPGY---PQPGYGHPAGYPQPMPPT 60
P AP ++P YP P PG GQP P YPG P P + +P P PP
Sbjct: 986 PQAPGLLPPQSP-YPYAPQPGVLGQPPP-PLHTQLYPGPAQDPLPAHSGALPFPSPGPPQ 1043
Query: 61 HP-MPMNYGP 69
P P+ YGP
Sbjct: 1044 PPHPPLAYGP 1053
Score = 31.6 bits (70), Expect = 0.94
Identities = 24/69 (34%), Positives = 25/69 (36%), Gaps = 11/69 (15%)
Query: 4 PSAPPPYEDRNPLY-PGPPPPGGYGQPSVL-------PGGYPAYPG---YPQPGYGHPAG 52
PS P P Y GP PPG Y P+ L P P PG YP P Y G
Sbjct: 773 PSPFPSSTGPGPHYLSGPLPPGTYSGPTQLIQPRAPGPHAMPVAPGPALYPAPAYTPELG 832
Query: 53 YPQPMPPTH 61
P H
Sbjct: 833 LVPRSSPQH 841
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 41.2 bits (95), Expect = 0.001
Identities = 22/52 (42%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Query: 4 PSAPPPYEDRNPLYPGPPPPGGYGQPSVLPGGYPAYPGYPQPGYGHPAGYPQ 55
P PP E NP P PP G QP P G P P P G G P+ PQ
Sbjct: 366 PQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQGPPRPPQG-GRPSRPPQ 416
Score = 39.3 bits (90), Expect = 0.005
Identities = 31/95 (32%), Positives = 37/95 (38%), Gaps = 23/95 (24%)
Query: 4 PSAPPPYEDRN------PLYPGPPPPGGYGQPSVLPGGYPAYPGYPQ----PGYGHPAGY 53
P PPP D++ P P PPP G QP G P PG PQ G P G
Sbjct: 98 PQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQ----GPPPPPGKPQGPPPQGGNKPQGP 153
Query: 54 PQPMPPTHPMPMNYGPGHGYDGEERAVSDSFGPGE 88
P P P P P G+ ++ S PG+
Sbjct: 154 PPPGKPQGPPP---------QGDNKSRSSRSPPGK 179
Score = 37.4 bits (85), Expect = 0.017
Identities = 27/72 (37%), Positives = 27/72 (37%), Gaps = 15/72 (20%)
Query: 4 PSAPPPYEDRN-------PLYPGPPPPGGYGQPSVLPGGYPAYPGYPQ----PGYGHPAG 52
P PPP D P P PPP G QP G P PG PQ G P G
Sbjct: 159 PQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQ----GPPPPPGKPQGPPPQGGNKPQG 214
Query: 53 YPQPMPPTHPMP 64
P P P P P
Sbjct: 215 PPPPGKPQGPPP 226
Score = 37.4 bits (85), Expect = 0.017
Identities = 27/72 (37%), Positives = 27/72 (37%), Gaps = 15/72 (20%)
Query: 4 PSAPPPYEDRN-------PLYPGPPPPGGYGQPSVLPGGYPAYPGYPQ----PGYGHPAG 52
P PPP D P P PPP G QP G P PG PQ G P G
Sbjct: 221 PQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQ----GPPPPPGKPQGPPPQGGNKPQG 276
Query: 53 YPQPMPPTHPMP 64
P P P P P
Sbjct: 277 PPPPGKPQGPPP 288
Score = 34.7 bits (78), Expect = 0.11
Identities = 26/73 (35%), Positives = 26/73 (35%), Gaps = 15/73 (20%)
Query: 3 NPSAPPPYEDRNPLYPGPPP-------PGGYGQPSVLPGGYPAYPGYPQ----PGYGHPA 51
NP PP P P PP P G QP G P PG PQ G P
Sbjct: 35 NPQGAPPQGGNKPQGPPSPPGKPQGPPPQGGNQPQ----GPPPPPGKPQGPPPQGGNKPQ 90
Query: 52 GYPQPMPPTHPMP 64
G P P P P P
Sbjct: 91 GPPPPGKPQGPPP 103
Score = 34.3 bits (77), Expect = 0.15
Identities = 24/68 (35%), Positives = 24/68 (35%), Gaps = 12/68 (17%)
Query: 4 PSAPPPYEDRNPLYP-------GPPPPGGYGQ-----PSVLPGGYPAYPGYPQPGYGHPA 51
P PPP P P GPPP GG P P G P G G P
Sbjct: 263 PQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPP 322
Query: 52 GYPQPMPP 59
G PQ PP
Sbjct: 323 GKPQGPPP 330
Score = 34.3 bits (77), Expect = 0.15
Identities = 26/72 (36%), Positives = 26/72 (36%), Gaps = 15/72 (20%)
Query: 4 PSAPPPYEDRN-------PLYPGPPPPGGYGQPSVLPGGYPAYPGYPQ----PGYGHPAG 52
P PPP P P PPP G QP G P PG PQ G P G
Sbjct: 283 PQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQ----GPPPPPGKPQGPPPQGGNKPQG 338
Query: 53 YPQPMPPTHPMP 64
P P P P P
Sbjct: 339 PPPPGKPQGPPP 350
Score = 33.9 bits (76), Expect = 0.19
Identities = 30/105 (28%), Positives = 34/105 (32%), Gaps = 22/105 (20%)
Query: 4 PSAPPPYEDRNPLYPGPPPPG--------------GYGQPSVLPGGYPAYPGYPQPGYGH 49
P PPP P GPPPPG P P G P G G
Sbjct: 139 PQGPPPQGGNKP--QGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPP 196
Query: 50 PAGYPQPMP------PTHPMPMNYGPGHGYDGEERAVSDSFGPGE 88
P G PQ P P P P G G+ ++ S PG+
Sbjct: 197 PPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSQSARSPPGK 241
Score = 33.5 bits (75), Expect = 0.25
Identities = 22/66 (33%), Positives = 23/66 (34%), Gaps = 1/66 (1%)
Query: 4 PSAPPPYEDRNPLYPGPPPPGGYGQPSVLPGGYPAYPGYPQPGYGHPAGYPQPMPPTHPM 63
P PPP P P PPPPG P G P P P G P + P P
Sbjct: 57 PQGPPPQGGNQPQGP-PPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPP 115
Query: 64 PMNYGP 69
GP
Sbjct: 116 GKPQGP 121
Score = 33.1 bits (74), Expect = 0.32
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Query: 2 SNPSAPPPYEDRNPLYPGPPPPG-GYGQPSVLPGGYPAYP 40
+NP PPP NP P PP G G P GG P+ P
Sbjct: 375 NNPQGPPPPAGGNPQQPQAPPAGQPQGPPRPPQGGRPSRP 414
Score = 32.7 bits (73), Expect = 0.42
Identities = 30/105 (28%), Positives = 33/105 (31%), Gaps = 22/105 (20%)
Query: 4 PSAPPPYEDRNPLYPGPPPPG--------------GYGQPSVLPGGYPAYPGYPQPGYGH 49
P PPP P GPPPPG P P G P G G
Sbjct: 201 PQGPPPQGGNKP--QGPPPPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPP 258
Query: 50 PAGYPQPMP------PTHPMPMNYGPGHGYDGEERAVSDSFGPGE 88
P G PQ P P P P G G ++ S PG+
Sbjct: 259 PPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGK 303
Score = 30.4 bits (67), Expect = 2.1
Identities = 28/86 (32%), Positives = 28/86 (32%), Gaps = 26/86 (30%)
Query: 4 PSAPPPYEDRNPLYP--------GPPPPGGYGQPSVLPGGYPAYPGYPQPGY-------- 47
P PPP P P GPPP GG P G P P PQ G
Sbjct: 304 PQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPP-PQGGSKSRSARSP 362
Query: 48 -GHPAGYPQ--------PMPPTHPMP 64
G P G PQ P PP P
Sbjct: 363 PGKPQGPPQQEGNNPQGPPPPAGGNP 388
Score = 29.3 bits (64), Expect = 4.7
Identities = 26/77 (33%), Positives = 29/77 (37%), Gaps = 24/77 (31%)
Query: 7 PPPYEDRNPLYPGPPPPGGY---------GQPSVLP--------GGYPAYPGYPQPGYGH 49
PPP + + GPPP GG G+P P G P G PQ
Sbjct: 340 PPPGKPQ-----GPPPQGGSKSRSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAP 394
Query: 50 PAGYPQ--PMPPTHPMP 64
PAG PQ P PP P
Sbjct: 395 PAGQPQGPPRPPQGGRP 411
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.327 0.144 0.464
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,694,462
Number of Sequences: 37866
Number of extensions: 1012864
Number of successful extensions: 11073
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 141
Number of HSP's successfully gapped in prelim test: 602
Number of HSP's that attempted gapping in prelim test: 6837
Number of HSP's gapped (non-prelim): 3366
length of query: 311
length of database: 18,247,518
effective HSP length: 102
effective length of query: 209
effective length of database: 14,385,186
effective search space: 3006503874
effective search space used: 3006503874
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.