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Search of human proteins with 4885641
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4885641 Fas apoptotic inhibitory molecule 3 isoform a [Homo
sapiens]
(390 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|216547575 Fas apoptotic inhibitory molecule 3 isoform a [Homo... 796 0.0
gi|4885641 Fas apoptotic inhibitory molecule 3 isoform a [Homo s... 796 0.0
gi|216547554 Fas apoptotic inhibitory molecule 3 isoform b [Homo... 543 e-154
gi|31377806 polymeric immunoglobulin receptor precursor [Homo sa... 72 1e-12
gi|172072602 Fc receptor, IgA, IgM, high affinity isoform 2 [Hom... 67 2e-11
gi|172072600 Fc receptor, IgA, IgM, high affinity isoform 1 [Hom... 67 2e-11
gi|117320515 Fc receptor, IgA, IgM, high affinity isoform 1 [Hom... 67 2e-11
gi|31324530 CD300e molecule [Homo sapiens] 54 2e-07
gi|56550061 leukocyte membrane antigen [Homo sapiens] 52 7e-07
gi|5729776 CD300C antigen [Homo sapiens] 44 3e-04
gi|153085429 hepatitis A virus cellular receptor 1 [Homo sapiens] 38 0.014
gi|153085427 hepatitis A virus cellular receptor 1 [Homo sapiens] 38 0.014
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 38 0.014
gi|21687218 CD300 molecule-like family member g [Homo sapiens] 36 0.052
gi|9507203 triggering receptor expressed on myeloid cells 2 prec... 36 0.068
gi|39995107 Fas-activated serine/threonine kinase isoform 4 [Hom... 35 0.12
gi|153945782 natural cytotoxicity triggering receptor 2 [Homo sa... 35 0.12
gi|239756124 PREDICTED: hypothetical protein [Homo sapiens] 35 0.15
gi|169215850 PREDICTED: transmembrane protein 46-like [Homo sapi... 35 0.15
gi|239748777 PREDICTED: hypothetical protein [Homo sapiens] 35 0.15
gi|20127580 BTB (POZ) domain containing 2 [Homo sapiens] 35 0.15
gi|157168355 CD22 molecule [Homo sapiens] 34 0.20
gi|239756941 PREDICTED: similar to CD300C antigen [Homo sapiens] 34 0.20
gi|239751445 PREDICTED: similar to CD300C antigen [Homo sapiens] 34 0.20
gi|239745950 PREDICTED: similar to CD300C antigen [Homo sapiens] 34 0.20
gi|37700254 triggering receptor expressed on myeloid cells-like ... 34 0.20
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 34 0.20
gi|169209664 PREDICTED: hypothetical protein FLJ39639 [Homo sapi... 34 0.26
gi|169216507 PREDICTED: similar to hCG1645335 [Homo sapiens] 34 0.26
gi|113426298 PREDICTED: hypothetical protein FLJ39639 [Homo sapi... 34 0.26
>gi|216547575 Fas apoptotic inhibitory molecule 3 isoform a [Homo
sapiens]
Length = 390
Score = 796 bits (2056), Expect = 0.0
Identities = 390/390 (100%), Positives = 390/390 (100%)
Query: 1 MDFWLWPLYFLPVSGALRILPEVKVEGELGGSVTIKCPLPEMHVRIYLCREMAGSGTCGT 60
MDFWLWPLYFLPVSGALRILPEVKVEGELGGSVTIKCPLPEMHVRIYLCREMAGSGTCGT
Sbjct: 1 MDFWLWPLYFLPVSGALRILPEVKVEGELGGSVTIKCPLPEMHVRIYLCREMAGSGTCGT 60
Query: 61 VVSTTNFIKAEYKGRVTLKQYPRKNLFLVEVTQLTESDSGVYACGAGMNTDRGKTQKVTL 120
VVSTTNFIKAEYKGRVTLKQYPRKNLFLVEVTQLTESDSGVYACGAGMNTDRGKTQKVTL
Sbjct: 61 VVSTTNFIKAEYKGRVTLKQYPRKNLFLVEVTQLTESDSGVYACGAGMNTDRGKTQKVTL 120
Query: 121 NVHSEYEPSWEEQPMPETPKWFHLPYLFQMPAYASSSKFVTRVTTPAQRGKVPPVHHSSP 180
NVHSEYEPSWEEQPMPETPKWFHLPYLFQMPAYASSSKFVTRVTTPAQRGKVPPVHHSSP
Sbjct: 121 NVHSEYEPSWEEQPMPETPKWFHLPYLFQMPAYASSSKFVTRVTTPAQRGKVPPVHHSSP 180
Query: 181 TTQITHRPRVSRASSVAGDKPRTFLPSTTASKISALEGLLKPQTPSYNHHTRLHRQRALD 240
TTQITHRPRVSRASSVAGDKPRTFLPSTTASKISALEGLLKPQTPSYNHHTRLHRQRALD
Sbjct: 181 TTQITHRPRVSRASSVAGDKPRTFLPSTTASKISALEGLLKPQTPSYNHHTRLHRQRALD 240
Query: 241 YGSQSGREGQGFHILIPTILGLFLLALLGLVVKRAVERRKALSRRARRLAVRMRALESSQ 300
YGSQSGREGQGFHILIPTILGLFLLALLGLVVKRAVERRKALSRRARRLAVRMRALESSQ
Sbjct: 241 YGSQSGREGQGFHILIPTILGLFLLALLGLVVKRAVERRKALSRRARRLAVRMRALESSQ 300
Query: 301 RPRGSPRPRSQNNIYSACPRRARGADAAGTGEAPVPGPGAPLPPAPLQVSESPWLHAPSL 360
RPRGSPRPRSQNNIYSACPRRARGADAAGTGEAPVPGPGAPLPPAPLQVSESPWLHAPSL
Sbjct: 301 RPRGSPRPRSQNNIYSACPRRARGADAAGTGEAPVPGPGAPLPPAPLQVSESPWLHAPSL 360
Query: 361 KTSCEYVSLYHQPAAMMEDSDSDDYINVPA 390
KTSCEYVSLYHQPAAMMEDSDSDDYINVPA
Sbjct: 361 KTSCEYVSLYHQPAAMMEDSDSDDYINVPA 390
>gi|4885641 Fas apoptotic inhibitory molecule 3 isoform a [Homo
sapiens]
Length = 390
Score = 796 bits (2056), Expect = 0.0
Identities = 390/390 (100%), Positives = 390/390 (100%)
Query: 1 MDFWLWPLYFLPVSGALRILPEVKVEGELGGSVTIKCPLPEMHVRIYLCREMAGSGTCGT 60
MDFWLWPLYFLPVSGALRILPEVKVEGELGGSVTIKCPLPEMHVRIYLCREMAGSGTCGT
Sbjct: 1 MDFWLWPLYFLPVSGALRILPEVKVEGELGGSVTIKCPLPEMHVRIYLCREMAGSGTCGT 60
Query: 61 VVSTTNFIKAEYKGRVTLKQYPRKNLFLVEVTQLTESDSGVYACGAGMNTDRGKTQKVTL 120
VVSTTNFIKAEYKGRVTLKQYPRKNLFLVEVTQLTESDSGVYACGAGMNTDRGKTQKVTL
Sbjct: 61 VVSTTNFIKAEYKGRVTLKQYPRKNLFLVEVTQLTESDSGVYACGAGMNTDRGKTQKVTL 120
Query: 121 NVHSEYEPSWEEQPMPETPKWFHLPYLFQMPAYASSSKFVTRVTTPAQRGKVPPVHHSSP 180
NVHSEYEPSWEEQPMPETPKWFHLPYLFQMPAYASSSKFVTRVTTPAQRGKVPPVHHSSP
Sbjct: 121 NVHSEYEPSWEEQPMPETPKWFHLPYLFQMPAYASSSKFVTRVTTPAQRGKVPPVHHSSP 180
Query: 181 TTQITHRPRVSRASSVAGDKPRTFLPSTTASKISALEGLLKPQTPSYNHHTRLHRQRALD 240
TTQITHRPRVSRASSVAGDKPRTFLPSTTASKISALEGLLKPQTPSYNHHTRLHRQRALD
Sbjct: 181 TTQITHRPRVSRASSVAGDKPRTFLPSTTASKISALEGLLKPQTPSYNHHTRLHRQRALD 240
Query: 241 YGSQSGREGQGFHILIPTILGLFLLALLGLVVKRAVERRKALSRRARRLAVRMRALESSQ 300
YGSQSGREGQGFHILIPTILGLFLLALLGLVVKRAVERRKALSRRARRLAVRMRALESSQ
Sbjct: 241 YGSQSGREGQGFHILIPTILGLFLLALLGLVVKRAVERRKALSRRARRLAVRMRALESSQ 300
Query: 301 RPRGSPRPRSQNNIYSACPRRARGADAAGTGEAPVPGPGAPLPPAPLQVSESPWLHAPSL 360
RPRGSPRPRSQNNIYSACPRRARGADAAGTGEAPVPGPGAPLPPAPLQVSESPWLHAPSL
Sbjct: 301 RPRGSPRPRSQNNIYSACPRRARGADAAGTGEAPVPGPGAPLPPAPLQVSESPWLHAPSL 360
Query: 361 KTSCEYVSLYHQPAAMMEDSDSDDYINVPA 390
KTSCEYVSLYHQPAAMMEDSDSDDYINVPA
Sbjct: 361 KTSCEYVSLYHQPAAMMEDSDSDDYINVPA 390
>gi|216547554 Fas apoptotic inhibitory molecule 3 isoform b [Homo
sapiens]
Length = 278
Score = 543 bits (1399), Expect = e-154
Identities = 266/266 (100%), Positives = 266/266 (100%)
Query: 125 EYEPSWEEQPMPETPKWFHLPYLFQMPAYASSSKFVTRVTTPAQRGKVPPVHHSSPTTQI 184
EYEPSWEEQPMPETPKWFHLPYLFQMPAYASSSKFVTRVTTPAQRGKVPPVHHSSPTTQI
Sbjct: 13 EYEPSWEEQPMPETPKWFHLPYLFQMPAYASSSKFVTRVTTPAQRGKVPPVHHSSPTTQI 72
Query: 185 THRPRVSRASSVAGDKPRTFLPSTTASKISALEGLLKPQTPSYNHHTRLHRQRALDYGSQ 244
THRPRVSRASSVAGDKPRTFLPSTTASKISALEGLLKPQTPSYNHHTRLHRQRALDYGSQ
Sbjct: 73 THRPRVSRASSVAGDKPRTFLPSTTASKISALEGLLKPQTPSYNHHTRLHRQRALDYGSQ 132
Query: 245 SGREGQGFHILIPTILGLFLLALLGLVVKRAVERRKALSRRARRLAVRMRALESSQRPRG 304
SGREGQGFHILIPTILGLFLLALLGLVVKRAVERRKALSRRARRLAVRMRALESSQRPRG
Sbjct: 133 SGREGQGFHILIPTILGLFLLALLGLVVKRAVERRKALSRRARRLAVRMRALESSQRPRG 192
Query: 305 SPRPRSQNNIYSACPRRARGADAAGTGEAPVPGPGAPLPPAPLQVSESPWLHAPSLKTSC 364
SPRPRSQNNIYSACPRRARGADAAGTGEAPVPGPGAPLPPAPLQVSESPWLHAPSLKTSC
Sbjct: 193 SPRPRSQNNIYSACPRRARGADAAGTGEAPVPGPGAPLPPAPLQVSESPWLHAPSLKTSC 252
Query: 365 EYVSLYHQPAAMMEDSDSDDYINVPA 390
EYVSLYHQPAAMMEDSDSDDYINVPA
Sbjct: 253 EYVSLYHQPAAMMEDSDSDDYINVPA 278
Score = 34.7 bits (78), Expect = 0.15
Identities = 12/12 (100%), Positives = 12/12 (100%)
Query: 1 MDFWLWPLYFLP 12
MDFWLWPLYFLP
Sbjct: 1 MDFWLWPLYFLP 12
>gi|31377806 polymeric immunoglobulin receptor precursor [Homo
sapiens]
Length = 764
Score = 71.6 bits (174), Expect = 1e-12
Identities = 42/117 (35%), Positives = 62/117 (52%), Gaps = 6/117 (5%)
Query: 10 FLPVSGALRILPEVKVEGELGGSVTIKCPLP----EMHVRIYLCREMAGSGTCGTVVSTT 65
F +S I +V G SV+I C P H R Y CR+ A G C T++S+
Sbjct: 13 FPAISTKSPIFGPEEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGARGG-CITLISSE 71
Query: 66 NFIKAEYKGRVTLKQYPRKNLFLVEVTQLTESDSGVYACGAGMNTDRGKTQKVTLNV 122
++ ++Y GR L +P F+V + QL++ DSG Y CG G+N+ RG + V+L V
Sbjct: 72 GYVSSKYAGRANLTNFPENGTFVVNIAQLSQDDSGRYKCGLGINS-RGLSFDVSLEV 127
Score = 57.0 bits (136), Expect = 3e-08
Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 3/83 (3%)
Query: 25 VEGELGGSVTIKCPLPEMH---VRIYLCREMAGSGTCGTVVSTTNFIKAEYKGRVTLKQY 81
V+G GGSV + CP ++ + E A +G C +V + ++KA+Y+GR++L +
Sbjct: 359 VKGVAGGSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEE 418
Query: 82 PRKNLFLVEVTQLTESDSGVYAC 104
P F V + QLT D+G Y C
Sbjct: 419 PGNGTFTVILNQLTSRDAGFYWC 441
Score = 52.4 bits (124), Expect = 7e-07
Identities = 34/88 (38%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Query: 21 PEVKVEGELGGSVTIKCPL-PEM-HVRIYLCREMAGSGTCGTVVSTTNFIKAEYKGRVTL 78
PE+ E +L GSVT C L PE+ +V +LCR+ +G C VV+T ++GR+ L
Sbjct: 242 PELVYE-DLRGSVTFHCALGPEVANVAKFLCRQSSGEN-CDVVVNTLGKRAPAFEGRILL 299
Query: 79 KQYPRKNLFLVEVTQLTESDSGVYACGA 106
+ F V +T L + D+G Y CGA
Sbjct: 300 NPQDKDGSFSVVITGLRKEDAGRYLCGA 327
Score = 40.4 bits (93), Expect = 0.003
Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 6/108 (5%)
Query: 11 LPVSGALRILPEVKVEG-ELGGSVTIKCPLPEMHV--RIYLCREMAGSGTCGTVVSTTNF 67
L VS +L + KV +LG +VTI CP + R L +++ V+ ++ +
Sbjct: 125 LEVSQGPGLLNDTKVYTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVL--VIDSSGY 182
Query: 68 IKAEYKGRVTLK-QYPRKNLFLVEVTQLTESDSGVYACGAGMNTDRGK 114
+ Y GR+ L Q + LF V + QL SD+G Y C AG +++ K
Sbjct: 183 VNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNK 230
>gi|172072602 Fc receptor, IgA, IgM, high affinity isoform 2 [Homo
sapiens]
Length = 552
Score = 67.4 bits (163), Expect = 2e-11
Identities = 35/87 (40%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 25 VEGELGGSVTIKCPLP----EMHVRIYLCREMAGSGTCGTVVSTTNFIKAEYKGRVTLKQ 80
V GE GG+VTI+C H R Y CR C T+VST + Y+ RV L
Sbjct: 90 VSGEPGGAVTIQCHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQYTHHRYRDRVALTD 149
Query: 81 YPRKNLFLVEVTQLTESDSGVYACGAG 107
+P++ LF+V ++QL+ D G Y CG G
Sbjct: 150 FPQRGLFVVRLSQLSPDDIGCYLCGIG 176
>gi|172072600 Fc receptor, IgA, IgM, high affinity isoform 1 [Homo
sapiens]
Length = 265
Score = 67.4 bits (163), Expect = 2e-11
Identities = 35/87 (40%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 25 VEGELGGSVTIKCPLP----EMHVRIYLCREMAGSGTCGTVVSTTNFIKAEYKGRVTLKQ 80
V GE GG+VTI+C H R Y CR C T+VST + Y+ RV L
Sbjct: 115 VSGEPGGAVTIQCHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQYTHHRYRDRVALTD 174
Query: 81 YPRKNLFLVEVTQLTESDSGVYACGAG 107
+P++ LF+V ++QL+ D G Y CG G
Sbjct: 175 FPQRGLFVVRLSQLSPDDIGCYLCGIG 201
>gi|117320515 Fc receptor, IgA, IgM, high affinity isoform 1 [Homo
sapiens]
Length = 265
Score = 67.4 bits (163), Expect = 2e-11
Identities = 35/87 (40%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 25 VEGELGGSVTIKCPLP----EMHVRIYLCREMAGSGTCGTVVSTTNFIKAEYKGRVTLKQ 80
V GE GG+VTI+C H R Y CR C T+VST + Y+ RV L
Sbjct: 115 VSGEPGGAVTIQCHYAPSSVNRHQRKYWCRLGPPRWICQTIVSTNQYTHHRYRDRVALTD 174
Query: 81 YPRKNLFLVEVTQLTESDSGVYACGAG 107
+P++ LF+V ++QL+ D G Y CG G
Sbjct: 175 FPQRGLFVVRLSQLSPDDIGCYLCGIG 201
>gi|31324530 CD300e molecule [Homo sapiens]
Length = 205
Score = 54.3 bits (129), Expect = 2e-07
Identities = 35/104 (33%), Positives = 50/104 (48%), Gaps = 4/104 (3%)
Query: 4 WLWP-LYFLPVSGALRILPEVKVEGELGGSVTIKCPLPEMH--VRIYLCREMAGSGTCGT 60
WL P L L +SG L + V G G S+T+ C M+ Y CR + +C +
Sbjct: 2 WLLPALLLLCLSGCLSLTGPGSVTGTAGDSLTVWCQYESMYKGYNKYWCRGQYDT-SCES 60
Query: 61 VVSTTNFIKAEYKGRVTLKQYPRKNLFLVEVTQLTESDSGVYAC 104
+V T K E GRV+++ +P F V + L E D+G Y C
Sbjct: 61 IVETKGEEKVERNGRVSIRDHPEALAFTVTMQNLNEDDAGSYWC 104
>gi|56550061 leukocyte membrane antigen [Homo sapiens]
Length = 299
Score = 52.4 bits (124), Expect = 7e-07
Identities = 35/105 (33%), Positives = 50/105 (47%), Gaps = 5/105 (4%)
Query: 4 WL-WPLYFLPVSGALRILPEVKVEGELGGSVTIKCPLPEMHVRI--YLCREMAGSGTCGT 60
WL W L L V G + V G +GGS++++CP + H + Y CR C
Sbjct: 2 WLPWALLLLWVPGCFALSKCRTVAGPVGGSLSVQCPYEKEHRTLNKYWCRPPQ-IFLCDK 60
Query: 61 VVSTTNFIKAEYKGRVTLKQYPRKNLFLVEVTQLTESDSGVYACG 105
+V T + GRV+++ P F V + LTE D+G Y CG
Sbjct: 61 IVETKGSA-GKRNGRVSIRDSPANLSFTVTLENLTEEDAGTYWCG 104
>gi|5729776 CD300C antigen [Homo sapiens]
Length = 224
Score = 43.5 bits (101), Expect = 3e-04
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 4/100 (4%)
Query: 8 LYFLPVSGALRILPEVKVEGELGGSVTIKCPLPEMHVRI--YLCREMAGSGTCGTVVSTT 65
L L V G + + V G +GGS++++C + H + + CR C +V T
Sbjct: 14 LLLLLVPGYFPLSHPMTVAGPVGGSLSVQCRYEKEHRTLNKFWCRPPQIL-RCDKIVETK 72
Query: 66 NFIKAEYKGRVTLKQYPRKNLFLVEVTQLTESDSGVYACG 105
+ GRV+++ P F V + LTE D+G Y CG
Sbjct: 73 GSA-GKRNGRVSIRDSPANLSFTVTLENLTEEDAGTYWCG 111
>gi|153085429 hepatitis A virus cellular receptor 1 [Homo sapiens]
Length = 364
Score = 38.1 bits (87), Expect = 0.014
Identities = 53/212 (25%), Positives = 74/212 (34%), Gaps = 26/212 (12%)
Query: 23 VKVEGELGGSVTIKCPLPEMHVRIYLCREMAGSGTCGTVVSTTNFIKAEYKGRVTLK--- 79
VKV GE G SVT+ C + R TC + TN Y+ K
Sbjct: 22 VKVGGEAGPSVTLPCHYSGAVTSMCWNRGSCSLFTCQNGIVWTNGTHVTYRKDTRYKLLG 81
Query: 80 QYPRKNLFLVEVTQLTESDSGVYACGAGMNTDRGKTQKVTLNVHSEYEPSWEEQPMPETP 139
R+++ L + SDSGVY C RG + + V E P P
Sbjct: 82 DLSRRDVSLT-IENTAVSDSGVYCCRV---EHRGWFNDMKITVSLEIVP----------P 127
Query: 140 KWFHLPYLFQMPAYA---SSSKFVTRVTTP---AQRGKVPPVHHSSPTTQITHRPRVSRA 193
K P + +P +S+ T T P VP TT + VS
Sbjct: 128 KVTTTPIVTTVPTVTTVRTSTTVPTTTTVPMTTVPTTTVPTTMSIPTTTTVLTTMTVSTT 187
Query: 194 SSVAGDKPRTFLPSTTASKISALEGLLKPQTP 225
+SV T +P+TT+ ++ P P
Sbjct: 188 TSV---PTTTSIPTTTSVPVTTTVSTFVPPMP 216
>gi|153085427 hepatitis A virus cellular receptor 1 [Homo sapiens]
Length = 364
Score = 38.1 bits (87), Expect = 0.014
Identities = 53/212 (25%), Positives = 74/212 (34%), Gaps = 26/212 (12%)
Query: 23 VKVEGELGGSVTIKCPLPEMHVRIYLCREMAGSGTCGTVVSTTNFIKAEYKGRVTLK--- 79
VKV GE G SVT+ C + R TC + TN Y+ K
Sbjct: 22 VKVGGEAGPSVTLPCHYSGAVTSMCWNRGSCSLFTCQNGIVWTNGTHVTYRKDTRYKLLG 81
Query: 80 QYPRKNLFLVEVTQLTESDSGVYACGAGMNTDRGKTQKVTLNVHSEYEPSWEEQPMPETP 139
R+++ L + SDSGVY C RG + + V E P P
Sbjct: 82 DLSRRDVSLT-IENTAVSDSGVYCCRV---EHRGWFNDMKITVSLEIVP----------P 127
Query: 140 KWFHLPYLFQMPAYA---SSSKFVTRVTTP---AQRGKVPPVHHSSPTTQITHRPRVSRA 193
K P + +P +S+ T T P VP TT + VS
Sbjct: 128 KVTTTPIVTTVPTVTTVRTSTTVPTTTTVPMTTVPTTTVPTTMSIPTTTTVLTTMTVSTT 187
Query: 194 SSVAGDKPRTFLPSTTASKISALEGLLKPQTP 225
+SV T +P+TT+ ++ P P
Sbjct: 188 TSV---PTTTSIPTTTSVPVTTTVSTFVPPMP 216
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 38.1 bits (87), Expect = 0.014
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 7/70 (10%)
Query: 278 RRKALSRRARRLAVRMRALESSQRPRGSPRPRSQNNIYSACPRRARGADAAGTGEAPVPG 337
+++A+ R + + ++ R Q PR P A PR RGA AA AP P
Sbjct: 78 QQRAVLRVSYKGSISYRNAARVQPPRRGATP-------PAPPRAPRGAPAAAAAAAPPPT 130
Query: 338 PGAPLPPAPL 347
P P PPAP+
Sbjct: 131 PAPPPPPAPV 140
>gi|21687218 CD300 molecule-like family member g [Homo sapiens]
Length = 332
Score = 36.2 bits (82), Expect = 0.052
Identities = 81/327 (24%), Positives = 124/327 (37%), Gaps = 51/327 (15%)
Query: 5 LWPLYFLPVSGALRILPEVKVEGELGGSVTIKCPLPE--MHVRIYLCREMAGSGTCGTVV 62
LW LP AL PE ++ G G +V+++C E R Y CR+ G +
Sbjct: 7 LWGCLLLPGYEALEG-PE-EISGFEGDTVSLQCTYREELRDHRKYWCRK---GGILFSRC 61
Query: 63 STTNFIKAE----YKGRVTLKQYPRKNLFLVEVTQLTESDSGVYACGAGMNTDRGKTQKV 118
S T + + E KGRV+++ ++ +V + LT D+G Y CG RG + +
Sbjct: 62 SGTIYAEEEGQETMKGRVSIRDSRQELSLIVTLWNLTLQDAGEYWCGV---EKRGPDESL 118
Query: 119 TLNVHSEYEPSWEEQPMP-----ETPKWFHLPYLFQMPAYASSSKFVTRVTTPAQRGK-- 171
+++ P P P T + Q +S + T A++GK
Sbjct: 119 LISLFVFPGPCCPPSPSPTFQPLATTRLQPKAKAQQTQPPGLTSPGLYPAATTAKQGKTG 178
Query: 172 --VPPVHHSSPTTQITHRPRVSRASSVAGDKPRTFLPSTTASKISALEGLLKPQTPSYNH 229
PP+ T+Q H R S G P P+T S G +P N
Sbjct: 179 AEAPPL---PGTSQYGH----ERTSQYTGTSPH---PAT-----SPPAGSSRPPM-QLNS 222
Query: 230 HTRLHRQRALDYGSQSGREG-QGFHILIPTILGLFLLALLGLVV--------KRAVERRK 280
+ AL GS R IL P ++ L LL+ GL+ ++ ++
Sbjct: 223 TSAEDTSPALSSGSSKPRVSIPMVRILAPVLVLLSLLSAAGLIAFCSHLLLWRKEAQQAT 282
Query: 281 ALSRRARRLAVRMRALES---SQRPRG 304
R + R+ A E SQ P G
Sbjct: 283 ETQRNEKFCLSRLTAEEKEAPSQAPEG 309
>gi|9507203 triggering receptor expressed on myeloid cells 2
precursor [Homo sapiens]
Length = 230
Score = 35.8 bits (81), Expect = 0.068
Identities = 25/104 (24%), Positives = 41/104 (39%), Gaps = 7/104 (6%)
Query: 26 EGELGGSVTIKCPLPEMHV---RIYLCREMAGSGTCGTVVSTTNF----IKAEYKGRVTL 78
+G G S+ + CP M R CR++ G C VVST N + G +
Sbjct: 25 QGVAGQSLQVSCPYDSMKHWGRRKAWCRQLGEKGPCQRVVSTHNLWLLSFLRRWNGSTAI 84
Query: 79 KQYPRKNLFLVEVTQLTESDSGVYACGAGMNTDRGKTQKVTLNV 122
+ + L D+G+Y C + ++ +KV + V
Sbjct: 85 TDDTLGGTLTITLRNLQPHDAGLYQCQSLHGSEADTLRKVLVEV 128
>gi|39995107 Fas-activated serine/threonine kinase isoform 4 [Homo
sapiens]
Length = 408
Score = 35.0 bits (79), Expect = 0.12
Identities = 23/63 (36%), Positives = 26/63 (41%), Gaps = 22/63 (34%)
Query: 300 QRPRGSPRPRSQNNIYSACPRRARGADAAGTGEAPVPGPG--------------APLPPA 345
+RPRG P PR+ PR GA AG GE+ P G P PP
Sbjct: 2 RRPRGEPGPRA--------PRPTEGATCAGPGESCFPSDGPLVCALEQERRLRLPPKPPP 53
Query: 346 PLQ 348
PLQ
Sbjct: 54 PLQ 56
>gi|153945782 natural cytotoxicity triggering receptor 2 [Homo
sapiens]
Length = 276
Score = 35.0 bits (79), Expect = 0.12
Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 4/92 (4%)
Query: 30 GGSVTIKCPLP---EMHVRIYLCREMAGSGTCGTVVSTTNFIKAEYKGRVTLKQYPRKNL 86
G ++T++C P ++ + C+E A + C +V+++ + R T+ P
Sbjct: 33 GQTLTVRCQYPPTGSLYEKKGWCKE-ASALVCIRLVTSSKPRTMAWTSRFTIWDDPDAGF 91
Query: 87 FLVEVTQLTESDSGVYACGAGMNTDRGKTQKV 118
F V +T L E DSG Y C +D ++ V
Sbjct: 92 FTVTMTDLREEDSGHYWCRIYRPSDNSVSKSV 123
>gi|239756124 PREDICTED: hypothetical protein [Homo sapiens]
Length = 348
Score = 34.7 bits (78), Expect = 0.15
Identities = 32/116 (27%), Positives = 48/116 (41%), Gaps = 10/116 (8%)
Query: 234 HRQRALDYGSQSGREGQGFHILIPTILGLFLLALLGLVVKRAVERRKALSRRARRLAVRM 293
HR GS G+E + P G L + + RA ++ R R R
Sbjct: 8 HRHNQSTAGSDQGKESKQ----TPAGRGRILTSQGTRPLTRAARTQEL--RGQREPHERQ 61
Query: 294 RALESS-QRPRGSPRPRSQNNIYSACPRRARGADAAGTGEAPV---PGPGAPLPPA 345
RA S+ + G PRPR + C R+ D++G G++ + PGP PP+
Sbjct: 62 RAARSAPELASGPPRPRLAGHFDPECSTRSSRTDSSGKGQSSLRASPGPPRRRPPS 117
>gi|169215850 PREDICTED: transmembrane protein 46-like [Homo
sapiens]
Length = 547
Score = 34.7 bits (78), Expect = 0.15
Identities = 37/110 (33%), Positives = 48/110 (43%), Gaps = 15/110 (13%)
Query: 280 KALSRRARRLAVRMRALESSQRPRGSP-RPRSQNNIYSACPRRARGADAAGTGEAPVPGP 338
KA RARR A R+ S RPR +P R SQ+ + CP + GA T PVP
Sbjct: 363 KAAVPRARRSANRL-PRPSGPRPRPAPARSPSQSPAGTPCPVLSLGARRGVTLPCPVPAE 421
Query: 339 GAP---------LPPAPLQV---SESPWLHAPSLKTSCEYV-SLYHQPAA 375
AP L P+P Q + P P+ +C + +Y PAA
Sbjct: 422 AAPRDFCQRFPALEPSPRQPPARAPRPSPDLPAPLDACPWAPPVYAPPAA 471
>gi|239748777 PREDICTED: hypothetical protein [Homo sapiens]
Length = 350
Score = 34.7 bits (78), Expect = 0.15
Identities = 22/60 (36%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Query: 292 RMRALESSQRPRGSPRPRSQNNIYSACPRRARGADAAGTGEAPVPGPGAPLPPAPLQVSE 351
R RA PR SP R ++ P R G AAG G P P P P PP + E
Sbjct: 190 RPRAPRPGDHPRRSPALRETPSLSPPSPGRRNGKRAAGKGTTPQPQP--PPPPCATRREE 247
>gi|20127580 BTB (POZ) domain containing 2 [Homo sapiens]
Length = 525
Score = 34.7 bits (78), Expect = 0.15
Identities = 19/43 (44%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 304 GSPRPRSQNNIYSACPRRARGADAAGTGEAPVPGPGAPLPPAP 346
GSP P S N + P A A AA A PGP P PP P
Sbjct: 24 GSPGP-SANAAATPAPGNAAAAAAAAAAAAAAPGPTPPAPPGP 65
>gi|157168355 CD22 molecule [Homo sapiens]
Length = 847
Score = 34.3 bits (77), Expect = 0.20
Identities = 21/93 (22%), Positives = 41/93 (44%), Gaps = 3/93 (3%)
Query: 40 PEMHVRIYLCREMAGSGTCGTVVSTTNFIKAEYKGRVTLKQ---YPRKNLFLVEVTQLTE 96
P++ +++ + G T+ + EY LK ++N F + + ++T+
Sbjct: 242 PKLEIKVTPSDAIVREGDSVTMTCEVSSSNPEYTTVSWLKDGTSLKKQNTFTLNLREVTK 301
Query: 97 SDSGVYACGAGMNTDRGKTQKVTLNVHSEYEPS 129
SG Y C + G++++V L V EPS
Sbjct: 302 DQSGKYCCQVSNDVGPGRSEEVFLQVQYAPEPS 334
>gi|239756941 PREDICTED: similar to CD300C antigen [Homo sapiens]
Length = 328
Score = 34.3 bits (77), Expect = 0.20
Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 19/101 (18%)
Query: 15 GALRILPEVKVEGELGGSVTIKCPLPEMHVRI--YLCR--------EMAGSGTCGTVVST 64
G L + V G +G S++++C E + Y CR EM +G VV +
Sbjct: 148 GCLTVSGPSTVMGAVGESLSVQCRYEEKYKTFNKYWCRQPCLPIWHEMVETGGSEGVVRS 207
Query: 65 TNFIKAEYKGRVTLKQYPRKNLFLVEVTQLTESDSGVYACG 105
I ++ G +T F V + LT D+G Y CG
Sbjct: 208 DQVIITDHPGDLT---------FTVTLENLTADDAGKYRCG 239
>gi|239751445 PREDICTED: similar to CD300C antigen [Homo sapiens]
Length = 259
Score = 34.3 bits (77), Expect = 0.20
Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 19/101 (18%)
Query: 15 GALRILPEVKVEGELGGSVTIKCPLPEMHVRI--YLCR--------EMAGSGTCGTVVST 64
G L + V G +G S++++C E + Y CR EM +G VV +
Sbjct: 79 GCLTVSGPSTVMGAVGESLSVQCRYEEKYKTFNKYWCRQPCLPIWHEMVETGGSEGVVRS 138
Query: 65 TNFIKAEYKGRVTLKQYPRKNLFLVEVTQLTESDSGVYACG 105
I ++ G +T F V + LT D+G Y CG
Sbjct: 139 DQVIITDHPGDLT---------FTVTLENLTADDAGKYRCG 170
>gi|239745950 PREDICTED: similar to CD300C antigen [Homo sapiens]
Length = 328
Score = 34.3 bits (77), Expect = 0.20
Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 19/101 (18%)
Query: 15 GALRILPEVKVEGELGGSVTIKCPLPEMHVRI--YLCR--------EMAGSGTCGTVVST 64
G L + V G +G S++++C E + Y CR EM +G VV +
Sbjct: 148 GCLTVSGPSTVMGAVGESLSVQCRYEEKYKTFNKYWCRQPCLPIWHEMVETGGSEGVVRS 207
Query: 65 TNFIKAEYKGRVTLKQYPRKNLFLVEVTQLTESDSGVYACG 105
I ++ G +T F V + LT D+G Y CG
Sbjct: 208 DQVIITDHPGDLT---------FTVTLENLTADDAGKYRCG 239
>gi|37700254 triggering receptor expressed on myeloid cells-like 4
[Homo sapiens]
Length = 200
Score = 34.3 bits (77), Expect = 0.20
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 9/99 (9%)
Query: 49 CREMAGSGTCGTVVSTTNFIKAEYKGRVTLKQYPRKNLFLVEVTQLTESDSGVYACGAGM 108
C++ + S C +V+++ A K T+ P F + + QLT++DSG Y CG
Sbjct: 55 CQQTSPS-RCTLLVTSSKPWTAVQKSHYTIWDKPNAGFFNITMIQLTQNDSGFYWCGIYN 113
Query: 109 NTDRGKTQKVTLNVHSEYEPSWEEQPMPETPKWFHLPYL 147
++ T V N+ S P P T + LP+L
Sbjct: 114 ASENIIT--VLRNI------SLVVSPAPTTSPMWTLPWL 144
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 34.3 bits (77), Expect = 0.20
Identities = 51/230 (22%), Positives = 77/230 (33%), Gaps = 36/230 (15%)
Query: 114 KTQKVTLNVHSEYEPSWEEQPMPETPKWFHLPYLFQMPAYASSSKFVTRVTTPAQRGKVP 173
K++ S EP + + P P L + + S+ + ++P R + P
Sbjct: 1664 KSRTARRGSRSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRSRSAS--SSPETRSRTP 1721
Query: 174 PVHHSSPTTQITHRPRVSRAS--SVAGDKPRTFLPSTTASKISAL-EGLLKPQTPSYNHH 230
P H SP+ SR+S + PRT S S GL + ++ S
Sbjct: 1722 PRHRRSPSVSSPEPAEKSRSSRRRRSASSPRTKTTSRRGRSPSPKPRGLQRSRSRSRREK 1781
Query: 231 TRLHRQRALDYGSQS-----------------GREGQGFHILIPTILGLFLLALLGLVVK 273
TR R+R SQS R G G+H P +
Sbjct: 1782 TRTTRRRDRSGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHSRSP--------------AR 1827
Query: 274 RAVERRKALSRRARRLAVRMRALESSQRPRGSPRPRSQNNIYSACPRRAR 323
+ R + RR R S R +P RS++ A RR+R
Sbjct: 1828 QESSRTSSRRRRGRSRTPPTSRKRSRSRTSPAPWKRSRSRASPATHRRSR 1877
Score = 29.3 bits (64), Expect = 6.4
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 7/87 (8%)
Query: 149 QMPAYASSSK-FVTRVTTPAQRGKVPPVHHSSPT-TQITHR--PRVSRASSVAGDKPRTF 204
Q P+ +SS + V + +P QR SSP+ +++T R PR SR+ S +
Sbjct: 907 QSPSRSSSPQPKVKAIISPRQRSHSGS---SSPSPSRVTSRTTPRRSRSVSPCSNVESRL 963
Query: 205 LPSTTASKISALEGLLKPQTPSYNHHT 231
LP + S S+ + +KP+TP H+
Sbjct: 964 LPRYSHSGSSSPDTKVKPETPPRQSHS 990
>gi|169209664 PREDICTED: hypothetical protein FLJ39639 [Homo
sapiens]
Length = 284
Score = 33.9 bits (76), Expect = 0.26
Identities = 22/48 (45%), Positives = 24/48 (50%), Gaps = 8/48 (16%)
Query: 301 RPRGSPRPRSQNNIYSACPRRARGADAAGT-GEAPV-PGPGAPLPPAP 346
RPR SP+PR+ A RGA T G AP P P PLPP P
Sbjct: 90 RPRTSPKPRA------ATGTTVRGASVKRTGGPAPAQPSPPGPLPPTP 131
>gi|169216507 PREDICTED: similar to hCG1645335 [Homo sapiens]
Length = 409
Score = 33.9 bits (76), Expect = 0.26
Identities = 33/116 (28%), Positives = 48/116 (41%), Gaps = 18/116 (15%)
Query: 265 LALLGLVVKRAVERRKALSRRARRLAVRMRALESSQRPRGSPRPRSQNNIYSACP----- 319
L LL L+ R +E A R+++ A S+ P + +Q N A P
Sbjct: 268 LGLLRLI--REMEAWAAFPARSQQGVAWAAAPVESEDPAAAQASPAQGNASEAGPGAEDA 325
Query: 320 --------RRARGADAAGTGEAPVPGPGAPLPPAPLQVSESPWLHAPSLKTSCEYV 367
ARGA AAG GE+ GP P++V PW +P+ +S +V
Sbjct: 326 AEAASATKEAARGAPAAGEGESAPAGPEGLGQARPIEV---PWGSSPARMSSAVWV 378
>gi|113426298 PREDICTED: hypothetical protein FLJ39639 [Homo
sapiens]
Length = 284
Score = 33.9 bits (76), Expect = 0.26
Identities = 22/48 (45%), Positives = 24/48 (50%), Gaps = 8/48 (16%)
Query: 301 RPRGSPRPRSQNNIYSACPRRARGADAAGT-GEAPV-PGPGAPLPPAP 346
RPR SP+PR+ A RGA T G AP P P PLPP P
Sbjct: 90 RPRTSPKPRA------ATGTTVRGASVKRTGGPAPAQPSPPGPLPPTP 131
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.133 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,074,018
Number of Sequences: 37866
Number of extensions: 938395
Number of successful extensions: 6703
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 144
Number of HSP's that attempted gapping in prelim test: 6433
Number of HSP's gapped (non-prelim): 401
length of query: 390
length of database: 18,247,518
effective HSP length: 104
effective length of query: 286
effective length of database: 14,309,454
effective search space: 4092503844
effective search space used: 4092503844
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.