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Search of human proteins with 48717447
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|48717447 lipocalin 9 [Homo sapiens]
(176 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|48717447 lipocalin 9 [Homo sapiens] 364 e-101
gi|169177936 PREDICTED: similar to hCG1795014 [Homo sapiens] 128 2e-30
gi|169179152 PREDICTED: similar to hCG1795014 [Homo sapiens] 128 2e-30
gi|169181274 PREDICTED: similar to hCG1795014 [Homo sapiens] 128 2e-30
gi|65507519 glycodelin precursor [Homo sapiens] 52 3e-07
gi|65507501 glycodelin precursor [Homo sapiens] 52 3e-07
gi|42714611 lipocalin 15 [Homo sapiens] 50 1e-06
gi|4504963 lipocalin 1 precursor [Homo sapiens] 43 1e-04
gi|7657407 odorant binding protein 2B [Homo sapiens] 39 0.003
gi|7657405 odorant binding protein 2A precursor [Homo sapiens] 35 0.034
gi|4502067 alpha-1-microglobulin/bikunin preproprotein [Homo sap... 34 0.075
gi|148226288 lipocalin-like 1 [Homo sapiens] 32 0.28
gi|110349721 titin isoform novex-3 [Homo sapiens] 30 1.4
gi|110349719 titin isoform N2-A [Homo sapiens] 30 1.4
gi|110349717 titin isoform novex-2 [Homo sapiens] 30 1.4
gi|110349713 titin isoform novex-1 [Homo sapiens] 30 1.4
gi|110349715 titin isoform N2-B [Homo sapiens] 30 1.4
gi|221307607 RANBP2-like and GRIP domain containing 3 [Homo sapi... 28 4.1
gi|4502163 apolipoprotein D precursor [Homo sapiens] 28 4.1
gi|32455271 protein-O-mannosyltransferase 2 [Homo sapiens] 28 5.4
gi|51317380 D-glucuronyl C5-epimerase [Homo sapiens] 27 7.0
gi|221554549 calpain 8 [Homo sapiens] 27 9.2
gi|4758922 phosphatidylinositol glycan anchor biosynthesis, clas... 27 9.2
>gi|48717447 lipocalin 9 [Homo sapiens]
Length = 176
Score = 364 bits (935), Expect = e-101
Identities = 176/176 (100%), Positives = 176/176 (100%)
Query: 1 MALLLLSLGLSLIAAQEFDPHTVMQRNYNVARVSGVWYSIFMASDDLNRIKENGDLRVFV 60
MALLLLSLGLSLIAAQEFDPHTVMQRNYNVARVSGVWYSIFMASDDLNRIKENGDLRVFV
Sbjct: 1 MALLLLSLGLSLIAAQEFDPHTVMQRNYNVARVSGVWYSIFMASDDLNRIKENGDLRVFV 60
Query: 61 RNIEHLKNGSLIFDFEYMVQGECVAVVVVCEKTEKNGEYSINYEGQNTVAVSETDYRLFI 120
RNIEHLKNGSLIFDFEYMVQGECVAVVVVCEKTEKNGEYSINYEGQNTVAVSETDYRLFI
Sbjct: 61 RNIEHLKNGSLIFDFEYMVQGECVAVVVVCEKTEKNGEYSINYEGQNTVAVSETDYRLFI 120
Query: 121 TFHLQNFRNGTETHTLALYETCEKYGLGSQNIIDLTNKDPCYSKHYRSPPRPPMRW 176
TFHLQNFRNGTETHTLALYETCEKYGLGSQNIIDLTNKDPCYSKHYRSPPRPPMRW
Sbjct: 121 TFHLQNFRNGTETHTLALYETCEKYGLGSQNIIDLTNKDPCYSKHYRSPPRPPMRW 176
>gi|169177936 PREDICTED: similar to hCG1795014 [Homo sapiens]
Length = 181
Score = 128 bits (322), Expect = 2e-30
Identities = 67/176 (38%), Positives = 104/176 (59%), Gaps = 19/176 (10%)
Query: 1 MALLLLSLGLSLIAAQEFDPHTVMQRNYNVARVSGVWYSIFMASDDLNRIKENGDLRVFV 60
M LLLL LGL+L+ AQE + + + N++++++SG WYS+ +ASD +I+E+G +RVFV
Sbjct: 1 MMLLLLCLGLTLVCAQEEENNDAVTSNFDLSKISGEWYSVLLASDCREKIEEDGSMRVFV 60
Query: 61 RNIEHLKNGSLIFDFEYMVQGECVAVVVVCEKTEKNGEYSINYEGQNTVAVSETDYRLFI 120
++I++L N SL F + G C + + C+ TEKN S +Y G N + + ETDY +I
Sbjct: 61 KHIDYLGNSSLTF----KLNGNCTEINLACKPTEKNAICSTDYNGLNVIDILETDYDNYI 116
Query: 121 TFHLQNFRNGTETHTLALY---------------ETCEKYGLGSQNIIDLTNKDPC 161
F+ +N +NG L LY + CE++G+ +NI DLT D C
Sbjct: 117 YFYNKNIKNGETFLMLELYVRTPDVSSQLKERFVKYCEEHGIDKENIFDLTKVDRC 172
>gi|169179152 PREDICTED: similar to hCG1795014 [Homo sapiens]
Length = 181
Score = 128 bits (322), Expect = 2e-30
Identities = 67/176 (38%), Positives = 104/176 (59%), Gaps = 19/176 (10%)
Query: 1 MALLLLSLGLSLIAAQEFDPHTVMQRNYNVARVSGVWYSIFMASDDLNRIKENGDLRVFV 60
M LLLL LGL+L+ AQE + + + N++++++SG WYS+ +ASD +I+E+G +RVFV
Sbjct: 1 MMLLLLCLGLTLVCAQEEENNDAVTSNFDLSKISGEWYSVLLASDCREKIEEDGSMRVFV 60
Query: 61 RNIEHLKNGSLIFDFEYMVQGECVAVVVVCEKTEKNGEYSINYEGQNTVAVSETDYRLFI 120
++I++L N SL F + G C + + C+ TEKN S +Y G N + + ETDY +I
Sbjct: 61 KHIDYLGNSSLTF----KLNGNCTEINLACKPTEKNAICSTDYNGLNVIDILETDYDNYI 116
Query: 121 TFHLQNFRNGTETHTLALY---------------ETCEKYGLGSQNIIDLTNKDPC 161
F+ +N +NG L LY + CE++G+ +NI DLT D C
Sbjct: 117 YFYNKNIKNGETFLMLELYVRTPDVSSQLKERFVKYCEEHGIDKENIFDLTKVDRC 172
>gi|169181274 PREDICTED: similar to hCG1795014 [Homo sapiens]
Length = 181
Score = 128 bits (322), Expect = 2e-30
Identities = 67/176 (38%), Positives = 104/176 (59%), Gaps = 19/176 (10%)
Query: 1 MALLLLSLGLSLIAAQEFDPHTVMQRNYNVARVSGVWYSIFMASDDLNRIKENGDLRVFV 60
M LLLL LGL+L+ AQE + + + N++++++SG WYS+ +ASD +I+E+G +RVFV
Sbjct: 1 MMLLLLCLGLTLVCAQEEENNDAVTSNFDLSKISGEWYSVLLASDCREKIEEDGSMRVFV 60
Query: 61 RNIEHLKNGSLIFDFEYMVQGECVAVVVVCEKTEKNGEYSINYEGQNTVAVSETDYRLFI 120
++I++L N SL F + G C + + C+ TEKN S +Y G N + + ETDY +I
Sbjct: 61 KHIDYLGNSSLTF----KLNGNCTEINLACKPTEKNAICSTDYNGLNVIDILETDYDNYI 116
Query: 121 TFHLQNFRNGTETHTLALY---------------ETCEKYGLGSQNIIDLTNKDPC 161
F+ +N +NG L LY + CE++G+ +NI DLT D C
Sbjct: 117 YFYNKNIKNGETFLMLELYVRTPDVSSQLKERFVKYCEEHGIDKENIFDLTKVDRC 172
>gi|65507519 glycodelin precursor [Homo sapiens]
Length = 180
Score = 52.0 bits (123), Expect = 3e-07
Identities = 33/127 (25%), Positives = 63/127 (49%), Gaps = 1/127 (0%)
Query: 1 MALLLLSLGLSLIAAQEFDPHTVMQRNYNVARVSGVWYSIFMASDDLNRIKE-NGDLRVF 59
M LLL+LG++L+ +++ + +++G W+S+ MA+++++ + LRV
Sbjct: 1 MLCLLLTLGVALVCGVPAMDIPQTKQDLELPKLAGTWHSMAMATNNISLMATLKAPLRVH 60
Query: 60 VRNIEHLKNGSLIFDFEYMVQGECVAVVVVCEKTEKNGEYSINYEGQNTVAVSETDYRLF 119
+ ++ +L CV V+ EKTE ++ INY N + +TDY F
Sbjct: 61 ITSLLPTPEDNLEIVLHRWENNSCVEKKVLGEKTENPKKFKINYTVANEATLLDTDYDNF 120
Query: 120 ITFHLQN 126
+ LQ+
Sbjct: 121 LFLCLQD 127
>gi|65507501 glycodelin precursor [Homo sapiens]
Length = 180
Score = 52.0 bits (123), Expect = 3e-07
Identities = 33/127 (25%), Positives = 63/127 (49%), Gaps = 1/127 (0%)
Query: 1 MALLLLSLGLSLIAAQEFDPHTVMQRNYNVARVSGVWYSIFMASDDLNRIKE-NGDLRVF 59
M LLL+LG++L+ +++ + +++G W+S+ MA+++++ + LRV
Sbjct: 1 MLCLLLTLGVALVCGVPAMDIPQTKQDLELPKLAGTWHSMAMATNNISLMATLKAPLRVH 60
Query: 60 VRNIEHLKNGSLIFDFEYMVQGECVAVVVVCEKTEKNGEYSINYEGQNTVAVSETDYRLF 119
+ ++ +L CV V+ EKTE ++ INY N + +TDY F
Sbjct: 61 ITSLLPTPEDNLEIVLHRWENNSCVEKKVLGEKTENPKKFKINYTVANEATLLDTDYDNF 120
Query: 120 ITFHLQN 126
+ LQ+
Sbjct: 121 LFLCLQD 127
>gi|42714611 lipocalin 15 [Homo sapiens]
Length = 184
Score = 49.7 bits (117), Expect = 1e-06
Identities = 35/139 (25%), Positives = 57/139 (41%)
Query: 1 MALLLLSLGLSLIAAQEFDPHTVMQRNYNVARVSGVWYSIFMASDDLNRIKENGDLRVFV 60
M LL L+L+ A ++Q ++N + SG+WY + MASD + + L +
Sbjct: 1 MMSFLLGAILTLLWAPTAQAEVLLQPDFNAEKFSGLWYVVSMASDCRVFLGKKDHLSMST 60
Query: 61 RNIEHLKNGSLIFDFEYMVQGECVAVVVVCEKTEKNGEYSINYEGQNTVAVSETDYRLFI 120
R I + G L E+ C V K G + + G V + +TDY F
Sbjct: 61 RAIRPTEEGGLHVHMEFPGADGCNQVDAEYLKVGSEGHFRVPALGYLDVRIVDTDYSSFA 120
Query: 121 TFHLQNFRNGTETHTLALY 139
++ G + + LY
Sbjct: 121 VLYIYKELEGALSTMVQLY 139
>gi|4504963 lipocalin 1 precursor [Homo sapiens]
Length = 176
Score = 43.1 bits (100), Expect = 1e-04
Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 4/100 (4%)
Query: 1 MALLLLSLGLSLIAAQEFDPHTVMQRNYNVARVSGVWYSIFMASDDLNRIKENGDLRVFV 60
M LLL++ L LIAA + H ++ + + VSG WY M D E V
Sbjct: 1 MKPLLLAVSLGLIAALQ--AHHLLASDEEIQDVSGTWYLKAMTVD--REFPEMNLESVTP 56
Query: 61 RNIEHLKNGSLIFDFEYMVQGECVAVVVVCEKTEKNGEYS 100
+ L+ G+L ++ G C V V EKT++ G+Y+
Sbjct: 57 MTLTTLEGGNLEAKVTMLISGRCQEVKAVLEKTDEPGKYT 96
>gi|7657407 odorant binding protein 2B [Homo sapiens]
Length = 170
Score = 38.5 bits (88), Expect = 0.003
Identities = 42/180 (23%), Positives = 75/180 (41%), Gaps = 25/180 (13%)
Query: 1 MALLLLSLGLSLIAAQEFDPHTVMQRNYNVARVSGVWYSIFMASDDLNRIKENGDLRVFV 60
M L L + L L AA F T+ + + ++G WY M D + ++ +V
Sbjct: 1 MKTLFLGVTLGLAAALSF---TLEEED-----ITGTWYVKAMVVDK-DFPEDRRPRKVSP 51
Query: 61 RNIEHLKNGSLIFDFEYMVQGECVAVVVVCEKTEKNGEYSINYEGQNTVAVSETDYRLFI 120
+ L G L F +M + C+ ++ KTE+ G+YS Y G+ + + E R
Sbjct: 52 VKVTALGGGKLEATFTFMREDRCIQKKILMRKTEEPGKYSA-YGGRKLMYLQELPRRDHY 110
Query: 121 TFHLQNFRNG------------TETHTLALYE---TCEKYGLGSQNIIDLTNKDPCYSKH 165
F+ ++ +G ++T+ AL E ++ GL ++I C +H
Sbjct: 111 IFYCKDQHHGGLLHMGKLVGRNSDTNREALEEFKKLVQRKGLSEEDIFTPLQTGSCVPEH 170
>gi|7657405 odorant binding protein 2A precursor [Homo sapiens]
Length = 170
Score = 35.0 bits (79), Expect = 0.034
Identities = 32/130 (24%), Positives = 58/130 (44%), Gaps = 10/130 (7%)
Query: 1 MALLLLSLGLSLIAAQEFDPHTVMQRNYNVARVSGVWYSIFMASDDLNRIKENGDLRVFV 60
M L L + L L AA F T+ + + ++G WY M D + ++ +V
Sbjct: 1 MKTLFLGVTLGLAAALSF---TLEEED-----ITGTWYVKAMVVDK-DFPEDRRPRKVSP 51
Query: 61 RNIEHLKNGSLIFDFEYMVQGECVAVVVVCEKTEKNGEYSINYEGQNTVAVSETDYRLFI 120
+ L G+L F +M + C+ ++ KTE+ G++S Y G+ + + E
Sbjct: 52 VKVTALGGGNLEATFTFMREDRCIQKKILMRKTEEPGKFSA-YGGRKLIYLQELPGTDDY 110
Query: 121 TFHLQNFRNG 130
F+ ++ R G
Sbjct: 111 VFYCKDQRRG 120
>gi|4502067 alpha-1-microglobulin/bikunin preproprotein [Homo
sapiens]
Length = 352
Score = 33.9 bits (76), Expect = 0.075
Identities = 37/145 (25%), Positives = 62/145 (42%), Gaps = 9/145 (6%)
Query: 3 LLLLSLGLSLIAAQEFDP--HTVMQRNYNVARVSGVWYSIFMASDD--LNRIKENGDLRV 58
LLLLS L++ A P + +Q N+N++R+ G WY++ + S L +I + +
Sbjct: 8 LLLLSACLAVSAGPVPTPPDNIQVQENFNISRIYGKWYNLAIGSTCPWLKKIMDRMTVST 67
Query: 59 FVRNIEHLKNGSLIFDFEYMVQGECVAVVVVCEKTEKNGEYSINYEGQNTVA---VSETD 115
V E + +G C EKT+ +G++ + N V T+
Sbjct: 68 LVLG-EGATEAEISMTSTRWRKGVCEETSGAYEKTDTDGKFLYHKSKWNITMESYVVHTN 126
Query: 116 YRLFITFHLQNF-RNGTETHTLALY 139
Y + F + F R+ T T LY
Sbjct: 127 YDEYAIFLTKKFSRHHGPTITAKLY 151
>gi|148226288 lipocalin-like 1 [Homo sapiens]
Length = 164
Score = 32.0 bits (71), Expect = 0.28
Identities = 23/99 (23%), Positives = 42/99 (42%), Gaps = 1/99 (1%)
Query: 42 MASDDLNRIKENGDLRVFVRNIEHLKNGSLIFDFEYMV-QGECVAVVVVCEKTEKNGEYS 100
+ SDD + + +++ V + L NG L F Y G C + + G++S
Sbjct: 4 VVSDDQDFLDSKDTMKMAVVLVTPLGNGDLALKFGYPTPHGGCQKMDTTFTEGAVPGQFS 63
Query: 101 INYEGQNTVAVSETDYRLFITFHLQNFRNGTETHTLALY 139
+ + V+ +DY+ F +L+ + G L LY
Sbjct: 64 NPAMALSDIRVAFSDYQHFALLYLEMRKGGLRNQWLQLY 102
>gi|110349721 titin isoform novex-3 [Homo sapiens]
Length = 5604
Score = 29.6 bits (65), Expect = 1.4
Identities = 26/102 (25%), Positives = 49/102 (48%), Gaps = 8/102 (7%)
Query: 66 LKNG---SLIFDFEYMVQGECVAVVVVCEKTEKNGEYSINYEGQNTVAVSETDYRLFITF 122
LKNG + F+ +VQG+ ++++ TE + EY+ G + V+ + T + IT
Sbjct: 2915 LKNGVEIEMSEKFKIVVQGKLHQLIIMNTSTEDSAEYTF-VCGNDQVSATLTVTPIMITS 2973
Query: 123 HLQNFRNGTETHTLALYETCEKYGLG---SQNIIDLTNKDPC 161
L++ N E T+ T G+ +N +++ + D C
Sbjct: 2974 MLKDI-NAEEKDTITFEVTVNYEGISYKWLKNGVEIKSTDKC 3014
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 29.6 bits (65), Expect = 1.4
Identities = 26/102 (25%), Positives = 49/102 (48%), Gaps = 8/102 (7%)
Query: 66 LKNG---SLIFDFEYMVQGECVAVVVVCEKTEKNGEYSINYEGQNTVAVSETDYRLFITF 122
LKNG + F+ +VQG+ ++++ TE + EY+ G + V+ + T + IT
Sbjct: 2915 LKNGVEIEMSEKFKIVVQGKLHQLIIMNTSTEDSAEYTF-VCGNDQVSATLTVTPIMITS 2973
Query: 123 HLQNFRNGTETHTLALYETCEKYGLG---SQNIIDLTNKDPC 161
L++ N E T+ T G+ +N +++ + D C
Sbjct: 2974 MLKDI-NAEEKDTITFEVTVNYEGISYKWLKNGVEIKSTDKC 3014
>gi|110349717 titin isoform novex-2 [Homo sapiens]
Length = 27118
Score = 29.6 bits (65), Expect = 1.4
Identities = 26/102 (25%), Positives = 49/102 (48%), Gaps = 8/102 (7%)
Query: 66 LKNG---SLIFDFEYMVQGECVAVVVVCEKTEKNGEYSINYEGQNTVAVSETDYRLFITF 122
LKNG + F+ +VQG+ ++++ TE + EY+ G + V+ + T + IT
Sbjct: 2869 LKNGVEIEMSEKFKIVVQGKLHQLIIMNTSTEDSAEYTF-VCGNDQVSATLTVTPIMITS 2927
Query: 123 HLQNFRNGTETHTLALYETCEKYGLG---SQNIIDLTNKDPC 161
L++ N E T+ T G+ +N +++ + D C
Sbjct: 2928 MLKDI-NAEEKDTITFEVTVNYEGISYKWLKNGVEIKSTDKC 2968
>gi|110349713 titin isoform novex-1 [Homo sapiens]
Length = 27051
Score = 29.6 bits (65), Expect = 1.4
Identities = 26/102 (25%), Positives = 49/102 (48%), Gaps = 8/102 (7%)
Query: 66 LKNG---SLIFDFEYMVQGECVAVVVVCEKTEKNGEYSINYEGQNTVAVSETDYRLFITF 122
LKNG + F+ +VQG+ ++++ TE + EY+ G + V+ + T + IT
Sbjct: 2869 LKNGVEIEMSEKFKIVVQGKLHQLIIMNTSTEDSAEYTF-VCGNDQVSATLTVTPIMITS 2927
Query: 123 HLQNFRNGTETHTLALYETCEKYGLG---SQNIIDLTNKDPC 161
L++ N E T+ T G+ +N +++ + D C
Sbjct: 2928 MLKDI-NAEEKDTITFEVTVNYEGISYKWLKNGVEIKSTDKC 2968
>gi|110349715 titin isoform N2-B [Homo sapiens]
Length = 26926
Score = 29.6 bits (65), Expect = 1.4
Identities = 26/102 (25%), Positives = 49/102 (48%), Gaps = 8/102 (7%)
Query: 66 LKNG---SLIFDFEYMVQGECVAVVVVCEKTEKNGEYSINYEGQNTVAVSETDYRLFITF 122
LKNG + F+ +VQG+ ++++ TE + EY+ G + V+ + T + IT
Sbjct: 2869 LKNGVEIEMSEKFKIVVQGKLHQLIIMNTSTEDSAEYTF-VCGNDQVSATLTVTPIMITS 2927
Query: 123 HLQNFRNGTETHTLALYETCEKYGLG---SQNIIDLTNKDPC 161
L++ N E T+ T G+ +N +++ + D C
Sbjct: 2928 MLKDI-NAEEKDTITFEVTVNYEGISYKWLKNGVEIKSTDKC 2968
>gi|221307607 RANBP2-like and GRIP domain containing 3 [Homo sapiens]
Length = 1758
Score = 28.1 bits (61), Expect = 4.1
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 40 IFMASDDLNRIKENGDLRVFVRNIEHLKNGSLIFDF 75
I + ++ R++ N + V N+EHLKN L F F
Sbjct: 1687 IKLLKSEIRRLERNQEQEVSAANVEHLKNVLLQFIF 1722
>gi|4502163 apolipoprotein D precursor [Homo sapiens]
Length = 189
Score = 28.1 bits (61), Expect = 4.1
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 13/78 (16%)
Query: 1 MALLLLSLGLSLIAAQEFD-------PHTVMQRNYNVARVSGVWYSIFMASDDLNRIKEN 53
M LLLLS L A E P+ +Q N++V + G WY I + + EN
Sbjct: 3 MLLLLLSALAGLFGAAEGQAFHLGKCPNPPVQENFDVNKYLGRWYEI----EKIPTTFEN 58
Query: 54 GDLRVFVRNIEHLKNGSL 71
G R N ++NG +
Sbjct: 59 G--RCIQANYSLMENGKI 74
>gi|32455271 protein-O-mannosyltransferase 2 [Homo sapiens]
Length = 750
Score = 27.7 bits (60), Expect = 5.4
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 91 EKTEKNGEYSINYEGQNTVAVSETDYRLFI 120
E T K + INY+G V++TD+R+++
Sbjct: 562 EFTSKPWHWPINYQGLRFSGVNDTDFRVYL 591
>gi|51317380 D-glucuronyl C5-epimerase [Homo sapiens]
Length = 617
Score = 27.3 bits (59), Expect = 7.0
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
Query: 67 KNGSLIFDFEYMVQGECVAVVVVCEKTEKNGEYSINY-EGQNTVAVSETD 115
K+ + FD +++ G +V VV E TEKN ++I+Y +A E D
Sbjct: 290 KDFIISFDLKFLTNG---SVSVVLETTEKNQLFTIHYVSNAQLIAFKERD 336
>gi|221554549 calpain 8 [Homo sapiens]
Length = 703
Score = 26.9 bits (58), Expect = 9.2
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 3/62 (4%)
Query: 37 WYSIFMASDDLNRIKENGDLRVFVRNIEHLKNGSLIFDFEYMVQGECVAVVVVCEKTEKN 96
W +AS LN E RV R+ + +N + IF F++ GE V VV+ KN
Sbjct: 106 WLLAAIASLTLN---EELLYRVVPRDQDFQENYAGIFHFQFWQYGEWVEVVIDDRLPTKN 162
Query: 97 GE 98
G+
Sbjct: 163 GQ 164
>gi|4758922 phosphatidylinositol glycan anchor biosynthesis, class L
[Homo sapiens]
Length = 252
Score = 26.9 bits (58), Expect = 9.2
Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 8/57 (14%)
Query: 120 ITFHLQNFRNGTETHTLALYETCEKYGLGSQNIIDLTNKDPCYSKHYRSPPRPPMRW 176
+ F N+ N ET L ++C+ G+ +++ + N+D P P M+W
Sbjct: 74 LCFSAGNYYNQGETRKKELLQSCDVLGIPLSSVMIIDNRD--------FPDDPGMQW 122
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.137 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,788,917
Number of Sequences: 37866
Number of extensions: 276207
Number of successful extensions: 612
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 584
Number of HSP's gapped (non-prelim): 41
length of query: 176
length of database: 18,247,518
effective HSP length: 95
effective length of query: 81
effective length of database: 14,650,248
effective search space: 1186670088
effective search space used: 1186670088
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.