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Search of human proteins with 48717423
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|48717423 hypothetical protein LOC401535 [Homo sapiens]
(121 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|48717423 hypothetical protein LOC401535 [Homo sapiens] 252 5e-68
gi|225903385 arginine vasopressin receptor 2 isoform 2 [Homo sap... 30 0.43
gi|4557345 arginine vasopressin receptor 2 isoform 1 [Homo sapiens] 30 0.43
gi|239047414 slingshot 1 isoform 1 [Homo sapiens] 30 0.57
gi|56090582 immunity-related GTPase family, Q [Homo sapiens] 29 0.74
gi|40317628 thrombospondin 2 precursor [Homo sapiens] 29 0.97
gi|154759423 Cdk5 and Abl enzyme substrate 1 isoform 2 [Homo sap... 28 1.3
gi|239047498 slingshot 1 isoform 3 [Homo sapiens] 28 2.2
gi|239047441 slingshot 1 isoform 2 [Homo sapiens] 28 2.2
gi|169168237 PREDICTED: hypothetical protein [Homo sapiens] 28 2.2
gi|169168052 PREDICTED: hypothetical protein [Homo sapiens] 28 2.2
gi|169167478 PREDICTED: hypothetical protein [Homo sapiens] 28 2.2
gi|4505579 furin preproprotein [Homo sapiens] 27 2.8
gi|23943920 cytosolic phospholipase A2, group IVA [Homo sapiens] 27 3.7
gi|239757070 PREDICTED: hypothetical protein [Homo sapiens] 27 3.7
gi|239751580 PREDICTED: hypothetical protein [Homo sapiens] 27 3.7
gi|239749667 PREDICTED: hypothetical protein XP_002347127 [Homo ... 27 3.7
gi|239746092 PREDICTED: hypothetical protein XP_002343656 [Homo ... 27 3.7
gi|239743938 PREDICTED: hypothetical protein XP_002342976 [Homo ... 27 3.7
gi|169213067 PREDICTED: hypothetical protein [Homo sapiens] 27 4.8
gi|169213235 PREDICTED: hypothetical protein [Homo sapiens] 27 4.8
gi|169212744 PREDICTED: hypothetical protein [Homo sapiens] 27 4.8
gi|109255251 loricrin [Homo sapiens] 27 4.8
gi|13994190 frizzled 8 [Homo sapiens] 27 4.8
gi|27262632 neural stem cell-derived dendrite regulator [Homo sa... 27 4.8
gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens] 26 6.3
gi|239756284 PREDICTED: similar to GOLGA8B protein, partial [Hom... 26 6.3
gi|239756274 PREDICTED: hypothetical protein [Homo sapiens] 26 6.3
gi|239750811 PREDICTED: hypothetical protein XP_002347568 [Homo ... 26 6.3
gi|239745171 PREDICTED: hypothetical protein XP_002343379 [Homo ... 26 6.3
>gi|48717423 hypothetical protein LOC401535 [Homo sapiens]
Length = 121
Score = 252 bits (643), Expect = 5e-68
Identities = 121/121 (100%), Positives = 121/121 (100%)
Query: 1 MWSRRGLGVSRAPLHLLLGVWGPSGRTGGQRKGASLARPGRGGLASCSVGANGKRDVLFL 60
MWSRRGLGVSRAPLHLLLGVWGPSGRTGGQRKGASLARPGRGGLASCSVGANGKRDVLFL
Sbjct: 1 MWSRRGLGVSRAPLHLLLGVWGPSGRTGGQRKGASLARPGRGGLASCSVGANGKRDVLFL 60
Query: 61 RKTLTNTVEDIQIDNFRRKSDLGVGSPDWKNLLIDVTREDHENSQNNSKRRCKVNCETDQ 120
RKTLTNTVEDIQIDNFRRKSDLGVGSPDWKNLLIDVTREDHENSQNNSKRRCKVNCETDQ
Sbjct: 61 RKTLTNTVEDIQIDNFRRKSDLGVGSPDWKNLLIDVTREDHENSQNNSKRRCKVNCETDQ 120
Query: 121 R 121
R
Sbjct: 121 R 121
>gi|225903385 arginine vasopressin receptor 2 isoform 2 [Homo
sapiens]
Length = 309
Score = 30.0 bits (66), Expect = 0.43
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 22 GPSGRTGGQRKGASLARPGRGGLASCSV 49
GPS R GG+R+G PG G S +V
Sbjct: 239 GPSERPGGRRRGRRTGSPGEGAHVSAAV 266
>gi|4557345 arginine vasopressin receptor 2 isoform 1 [Homo sapiens]
Length = 371
Score = 30.0 bits (66), Expect = 0.43
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 22 GPSGRTGGQRKGASLARPGRGGLASCSV 49
GPS R GG+R+G PG G S +V
Sbjct: 239 GPSERPGGRRRGRRTGSPGEGAHVSAAV 266
>gi|239047414 slingshot 1 isoform 1 [Homo sapiens]
Length = 1049
Score = 29.6 bits (65), Expect = 0.57
Identities = 16/49 (32%), Positives = 22/49 (44%)
Query: 71 IQIDNFRRKSDLGVGSPDWKNLLIDVTREDHENSQNNSKRRCKVNCETD 119
+Q++ R+ LG G +D + EN NNSKR C E D
Sbjct: 585 LQVEETEREEGLGAGRWGQLPTQLDQNLLNSENLNNNSKRSCPNGMEDD 633
>gi|56090582 immunity-related GTPase family, Q [Homo sapiens]
Length = 623
Score = 29.3 bits (64), Expect = 0.74
Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Query: 9 VSRAPLHLLLGVWGPSGRTGGQRKGA-SLARPGRGGLASCSVGANGKRDVL 58
V+RA + LG W G GG GA S P G A+ +G VL
Sbjct: 551 VTRAEVEARLGAWAGEGTAGGAALGALSFLWPAGGAAATGGLGYRAAHGVL 601
>gi|40317628 thrombospondin 2 precursor [Homo sapiens]
Length = 1172
Score = 28.9 bits (63), Expect = 0.97
Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 7/74 (9%)
Query: 29 GQRKGASLARPGRG-GLASCSVGANGKRDVLFLRKTLTNTVEDIQIDNFRRKSDLGVGSP 87
G+ +G LA G G + +NG D L L + T + ++ D+G+
Sbjct: 94 GKSRGTLLALEGPGLSQRQFEIVSNGPADTLDLTYWIDGTRHVVSLE------DVGLADS 147
Query: 88 DWKNLLIDVTREDH 101
WKN+ + V E +
Sbjct: 148 QWKNVTVQVAGETY 161
>gi|154759423 Cdk5 and Abl enzyme substrate 1 isoform 2 [Homo
sapiens]
Length = 633
Score = 28.5 bits (62), Expect = 1.3
Identities = 19/57 (33%), Positives = 28/57 (49%)
Query: 35 SLARPGRGGLASCSVGANGKRDVLFLRKTLTNTVEDIQIDNFRRKSDLGVGSPDWKN 91
SL +PG+GG S R L +++ T+EDI+ + R+ GSP KN
Sbjct: 262 SLEQPGQGGSTSAFEQLQRSRRRLISQRSSLETLEDIEENAPLRRCRTLSGSPRPKN 318
>gi|239047498 slingshot 1 isoform 3 [Homo sapiens]
Length = 703
Score = 27.7 bits (60), Expect = 2.2
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 71 IQIDNFRRKSDLGVGSPDWKNLLIDVTREDHENSQNNSKRRC 112
+Q++ R+ LG G +D + EN NNSKR C
Sbjct: 596 LQVEETEREEGLGAGRWGQLPTQLDQNLLNSENLNNNSKRSC 637
>gi|239047441 slingshot 1 isoform 2 [Homo sapiens]
Length = 692
Score = 27.7 bits (60), Expect = 2.2
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 71 IQIDNFRRKSDLGVGSPDWKNLLIDVTREDHENSQNNSKRRC 112
+Q++ R+ LG G +D + EN NNSKR C
Sbjct: 585 LQVEETEREEGLGAGRWGQLPTQLDQNLLNSENLNNNSKRSC 626
>gi|169168237 PREDICTED: hypothetical protein [Homo sapiens]
Length = 60
Score = 27.7 bits (60), Expect = 2.2
Identities = 15/31 (48%), Positives = 17/31 (54%)
Query: 12 APLHLLLGVWGPSGRTGGQRKGASLARPGRG 42
A L LG GP+G GG +GAS A P G
Sbjct: 2 ASLPHALGRQGPAGYAGGGARGASSAPPSGG 32
>gi|169168052 PREDICTED: hypothetical protein [Homo sapiens]
Length = 60
Score = 27.7 bits (60), Expect = 2.2
Identities = 15/31 (48%), Positives = 17/31 (54%)
Query: 12 APLHLLLGVWGPSGRTGGQRKGASLARPGRG 42
A L LG GP+G GG +GAS A P G
Sbjct: 2 ASLPHALGRQGPAGYAGGGARGASSAPPSGG 32
>gi|169167478 PREDICTED: hypothetical protein [Homo sapiens]
Length = 60
Score = 27.7 bits (60), Expect = 2.2
Identities = 15/31 (48%), Positives = 17/31 (54%)
Query: 12 APLHLLLGVWGPSGRTGGQRKGASLARPGRG 42
A L LG GP+G GG +GAS A P G
Sbjct: 2 ASLPHALGRQGPAGYAGGGARGASSAPPSGG 32
>gi|4505579 furin preproprotein [Homo sapiens]
Length = 794
Score = 27.3 bits (59), Expect = 2.8
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 8/57 (14%)
Query: 5 RGLGVSRAPLHLLLGVWGP--SGRT-GGQRKGASLA-----RPGRGGLASCSVGANG 53
R LG++ +H+ WGP G+T G + A A GRGGL S V A+G
Sbjct: 238 RSLGLNPNHIHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASG 294
>gi|23943920 cytosolic phospholipase A2, group IVA [Homo sapiens]
Length = 749
Score = 26.9 bits (58), Expect = 3.7
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 9/33 (27%)
Query: 13 PLHLLLGVWGPS---------GRTGGQRKGASL 36
PLH L+GVWG + G +G Q +G+++
Sbjct: 385 PLHFLMGVWGSAFSILFNRVLGVSGSQSRGSTM 417
>gi|239757070 PREDICTED: hypothetical protein [Homo sapiens]
Length = 195
Score = 26.9 bits (58), Expect = 3.7
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 18 LGVWGPSGRTGGQRKGASLARPGRGGLASCSVGANGKR 55
LG+ +GR GG+ + + A P RGG + VG + R
Sbjct: 88 LGLRAGAGRGGGEEEEPARAPPRRGGASRGRVGRHRHR 125
>gi|239751580 PREDICTED: hypothetical protein [Homo sapiens]
Length = 195
Score = 26.9 bits (58), Expect = 3.7
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 18 LGVWGPSGRTGGQRKGASLARPGRGGLASCSVGANGKR 55
LG+ +GR GG+ + + A P RGG + VG + R
Sbjct: 88 LGLRAGAGRGGGEEEEPARAPPRRGGASRGRVGRHRHR 125
>gi|239749667 PREDICTED: hypothetical protein XP_002347127 [Homo
sapiens]
Length = 146
Score = 26.9 bits (58), Expect = 3.7
Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 6/58 (10%)
Query: 19 GVWGPSGRTGGQRKGASLARPGRGG-----LASC-SVGANGKRDVLFLRKTLTNTVED 70
G WG GR G R S+ R R G L C VG G R + K+ + V +
Sbjct: 36 GGWGRRGRMSGHRGSCSIIRQSRSGQSTNVLVLCLQVGQVGLRPLAAAAKSFPDGVAE 93
>gi|239746092 PREDICTED: hypothetical protein XP_002343656 [Homo
sapiens]
Length = 195
Score = 26.9 bits (58), Expect = 3.7
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 18 LGVWGPSGRTGGQRKGASLARPGRGGLASCSVGANGKR 55
LG+ +GR GG+ + + A P RGG + VG + R
Sbjct: 88 LGLRAGAGRGGGEEEEPARAPPRRGGASRGRVGRHRHR 125
>gi|239743938 PREDICTED: hypothetical protein XP_002342976 [Homo
sapiens]
Length = 146
Score = 26.9 bits (58), Expect = 3.7
Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 6/58 (10%)
Query: 19 GVWGPSGRTGGQRKGASLARPGRGG-----LASC-SVGANGKRDVLFLRKTLTNTVED 70
G WG GR G R S+ R R G L C VG G R + K+ + V +
Sbjct: 36 GGWGRRGRMSGHRGSCSIIRQSRSGQSTNVLVLCLQVGQVGLRPLAAAAKSFPDGVAE 93
>gi|169213067 PREDICTED: hypothetical protein [Homo sapiens]
Length = 303
Score = 26.6 bits (57), Expect = 4.8
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 24/66 (36%)
Query: 8 GVSRAPLHLLLGV-----WGPS-------GRTGGQRKGASLAR---PGR--------GGL 44
G++R P+ +L GV W P G GG+R +L R PGR GG+
Sbjct: 208 GMTRGPV-VLSGVNRQHRWPPGASPSRSLGEAGGERPARALRRPRAPGRAGGGGPPGGGI 266
Query: 45 ASCSVG 50
+CS+G
Sbjct: 267 PACSIG 272
>gi|169213235 PREDICTED: hypothetical protein [Homo sapiens]
Length = 308
Score = 26.6 bits (57), Expect = 4.8
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 24/66 (36%)
Query: 8 GVSRAPLHLLLGV-----WGPS-------GRTGGQRKGASLAR---PGR--------GGL 44
G++R P+ +L GV W P G GG+R +L R PGR GG+
Sbjct: 213 GMTRGPV-VLSGVNRQHRWPPGASPSRSLGEAGGERPARALRRPRAPGRAGGGGPPGGGI 271
Query: 45 ASCSVG 50
+CS+G
Sbjct: 272 PACSIG 277
>gi|169212744 PREDICTED: hypothetical protein [Homo sapiens]
Length = 308
Score = 26.6 bits (57), Expect = 4.8
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 24/66 (36%)
Query: 8 GVSRAPLHLLLGV-----WGPS-------GRTGGQRKGASLAR---PGR--------GGL 44
G++R P+ +L GV W P G GG+R +L R PGR GG+
Sbjct: 213 GMTRGPV-VLSGVNRQHRWPPGASPSRSLGEAGGERPARALRRPRAPGRAGGGGPPGGGI 271
Query: 45 ASCSVG 50
+CS+G
Sbjct: 272 PACSIG 277
>gi|109255251 loricrin [Homo sapiens]
Length = 312
Score = 26.6 bits (57), Expect = 4.8
Identities = 13/35 (37%), Positives = 16/35 (45%)
Query: 19 GVWGPSGRTGGQRKGASLARPGRGGLASCSVGANG 53
G G G +GG G S G GG+ C G+ G
Sbjct: 52 GYSGGGGYSGGGCGGGSSGGGGGGGIGGCGGGSGG 86
>gi|13994190 frizzled 8 [Homo sapiens]
Length = 694
Score = 26.6 bits (57), Expect = 4.8
Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 6/56 (10%)
Query: 23 PSGRTGGQRKGASLARPGRGGLASCSVGANGKRDVLFL---RKTLTNTVEDIQIDN 75
P R GG G ARP GG A C G + ++ + R L N V+ QI N
Sbjct: 207 PPARGGG---GGGKARPPGGGAAPCEPGCQCRAPMVSVSSERHPLYNRVKTGQIAN 259
>gi|27262632 neural stem cell-derived dendrite regulator [Homo
sapiens]
Length = 1042
Score = 26.6 bits (57), Expect = 4.8
Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 53 GKRDVLFLRKTLTNTVE-DIQIDNFRRKSDLGVGSPDWKNLLIDVTREDHENSQNNSKRR 111
GK +L K + + E D+ + ++ L G P L +++ DH NS SK +
Sbjct: 669 GKTALLSAAKVMVSPTEVDLTPELIFQQQPLPTGPPMPTGLALELPTADHRNSSVRSKSQ 728
Query: 112 CKVNCE 117
+++ E
Sbjct: 729 SEMSLE 734
>gi|170650694 centaurin, gamma 1 isoform PIKE-L [Homo sapiens]
Length = 1192
Score = 26.2 bits (56), Expect = 6.3
Identities = 17/36 (47%), Positives = 18/36 (50%), Gaps = 4/36 (11%)
Query: 10 SRAPLHLLLGVWG---PSGRTGGQRKGASLARPGRG 42
SR PL L WG P GR GG G+S PG G
Sbjct: 140 SRRPL-LSSPSWGGPEPEGRAGGGIPGSSSPHPGTG 174
>gi|239756284 PREDICTED: similar to GOLGA8B protein, partial [Homo
sapiens]
Length = 314
Score = 26.2 bits (56), Expect = 6.3
Identities = 16/40 (40%), Positives = 19/40 (47%)
Query: 14 LHLLLGVWGPSGRTGGQRKGASLARPGRGGLASCSVGANG 53
+H LL G S + G A PGRGG +VGA G
Sbjct: 165 VHRLLTEPGDSAKDASPGGGHHQAGPGRGGEEGEAVGAAG 204
>gi|239756274 PREDICTED: hypothetical protein [Homo sapiens]
Length = 775
Score = 26.2 bits (56), Expect = 6.3
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 6 GLGVSRAPLHLLLGVW-GPSGRTGGQRKGASLARPGRGGLASCSVGA 51
G GV+ AP+H LL V G G T G +A P + + VGA
Sbjct: 233 GTGVAGAPVHFLLAVGAGEVGGTFTSIVGPLVALPAGAPIEAGGVGA 279
>gi|239750811 PREDICTED: hypothetical protein XP_002347568 [Homo
sapiens]
Length = 765
Score = 26.2 bits (56), Expect = 6.3
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 6 GLGVSRAPLHLLLGVW-GPSGRTGGQRKGASLARPGRGGLASCSVGA 51
G GV+ AP+H LL V G G T G +A P + + VGA
Sbjct: 222 GTGVAGAPVHFLLAVGAGEVGGTFTSIVGPLVALPAGAPIEAGGVGA 268
>gi|239745171 PREDICTED: hypothetical protein XP_002343379 [Homo
sapiens]
Length = 765
Score = 26.2 bits (56), Expect = 6.3
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 6 GLGVSRAPLHLLLGVW-GPSGRTGGQRKGASLARPGRGGLASCSVGA 51
G GV+ AP+H LL V G G T G +A P + + VGA
Sbjct: 222 GTGVAGAPVHFLLAVGAGEVGGTFTSIVGPLVALPAGAPIEAGGVGA 268
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.136 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,107,882
Number of Sequences: 37866
Number of extensions: 223213
Number of successful extensions: 855
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 831
Number of HSP's gapped (non-prelim): 47
length of query: 121
length of database: 18,247,518
effective HSP length: 89
effective length of query: 32
effective length of database: 14,877,444
effective search space: 476078208
effective search space used: 476078208
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.