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Search of human proteins with 4826962
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4826962 ras-related C3 botulinum toxin substrate 3 (rho
family, small GTP binding protein Rac3) [Homo sapiens]
(192 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4826962 ras-related C3 botulinum toxin substrate 3 (rho famil... 399 e-112
gi|9845511 ras-related C3 botulinum toxin substrate 1 isoform Ra... 374 e-104
gi|9845509 ras-related C3 botulinum toxin substrate 1 isoform Ra... 363 e-101
gi|4506381 ras-related C3 botulinum toxin substrate 2 [Homo sapi... 359 e-100
gi|16357472 cell division cycle 42 isoform 2 [Homo sapiens] 284 3e-77
gi|89903012 cell division cycle 42 isoform 1 [Homo sapiens] 280 7e-76
gi|4757952 cell division cycle 42 isoform 1 [Homo sapiens] 280 7e-76
gi|46249393 ras homolog gene family, member G [Homo sapiens] 276 8e-75
gi|50263042 ras-like protein TC10 [Homo sapiens] 250 5e-67
gi|16903164 ras homolog gene family, member J [Homo sapiens] 237 4e-63
gi|11034843 ras homolog gene family, member U [Homo sapiens] 214 4e-56
gi|10835049 ras homolog gene family, member A [Homo sapiens] 211 2e-55
gi|111494251 ras homolog gene family, member C precursor [Homo s... 209 9e-55
gi|111494248 ras homolog gene family, member C precursor [Homo s... 209 9e-55
gi|28395033 ras homolog gene family, member C precursor [Homo sa... 209 9e-55
gi|229577148 ras homolog gene family, member V [Homo sapiens] 208 2e-54
gi|4757764 ras homolog gene family, member B [Homo sapiens] 206 8e-54
gi|7656900 ras homolog D [Homo sapiens] 200 5e-52
gi|38016957 ras homolog gene family, member F [Homo sapiens] 187 5e-48
gi|4885581 Rho family GTPase 2 [Homo sapiens] 166 1e-41
gi|4885069 ras homolog gene family, member E [Homo sapiens] 164 3e-41
gi|4757770 ras homolog gene family, member H [Homo sapiens] 155 2e-38
gi|7657514 GTP-binding protein RHO6 [Homo sapiens] 147 7e-36
gi|237649113 Rho-related BTB domain containing 2 isoform 3 [Homo... 130 7e-31
gi|237649111 Rho-related BTB domain containing 2 isoform 2 [Homo... 130 7e-31
gi|237649109 Rho-related BTB domain containing 2 isoform 1 [Homo... 130 7e-31
gi|28629866 Rho-related BTB domain containing 1 [Homo sapiens] 129 1e-30
gi|5902050 Ras-like without CAAX 1 [Homo sapiens] 92 4e-19
gi|7705963 RAB9B, member RAS oncogene family [Homo sapiens] 90 1e-18
gi|38201690 RAP2B, member of RAS oncogene family [Homo sapiens] 89 2e-18
>gi|4826962 ras-related C3 botulinum toxin substrate 3 (rho family,
small GTP binding protein Rac3) [Homo sapiens]
Length = 192
Score = 399 bits (1025), Expect = e-112
Identities = 192/192 (100%), Positives = 192/192 (100%)
Query: 1 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG 60
MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG
Sbjct: 1 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG 60
Query: 61 QEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPHTPILLVGTKLDLR 120
QEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPHTPILLVGTKLDLR
Sbjct: 61 QEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPHTPILLVGTKLDLR 120
Query: 121 DDKDTIERLRDKKLAPITYPQGLAMAREIGSVKYLECSALTQRGLKTVFDEAIRAVLCPP 180
DDKDTIERLRDKKLAPITYPQGLAMAREIGSVKYLECSALTQRGLKTVFDEAIRAVLCPP
Sbjct: 121 DDKDTIERLRDKKLAPITYPQGLAMAREIGSVKYLECSALTQRGLKTVFDEAIRAVLCPP 180
Query: 181 PVKKPGKKCTVF 192
PVKKPGKKCTVF
Sbjct: 181 PVKKPGKKCTVF 192
>gi|9845511 ras-related C3 botulinum toxin substrate 1 isoform Rac1
[Homo sapiens]
Length = 192
Score = 374 bits (961), Expect = e-104
Identities = 178/189 (94%), Positives = 186/189 (98%)
Query: 1 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG 60
MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG
Sbjct: 1 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG 60
Query: 61 QEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPHTPILLVGTKLDLR 120
QEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCP+TPI+LVGTKLDLR
Sbjct: 61 QEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDLR 120
Query: 121 DDKDTIERLRDKKLAPITYPQGLAMAREIGSVKYLECSALTQRGLKTVFDEAIRAVLCPP 180
DDKDTIE+L++KKL PITYPQGLAMA+EIG+VKYLECSALTQRGLKTVFDEAIRAVLCPP
Sbjct: 121 DDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAVLCPP 180
Query: 181 PVKKPGKKC 189
PVKK +KC
Sbjct: 181 PVKKRKRKC 189
>gi|9845509 ras-related C3 botulinum toxin substrate 1 isoform Rac1b
[Homo sapiens]
Length = 211
Score = 363 bits (931), Expect = e-101
Identities = 178/208 (85%), Positives = 186/208 (89%), Gaps = 19/208 (9%)
Query: 1 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG 60
MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG
Sbjct: 1 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG 60
Query: 61 QEDYDRLRPLSYPQT-------------------DVFLICFSLVSPASFENVRAKWYPEV 101
QEDYDRLRPLSYPQT DVFLICFSLVSPASFENVRAKWYPEV
Sbjct: 61 QEDYDRLRPLSYPQTVGETYGKDITSRGKDKPIADVFLICFSLVSPASFENVRAKWYPEV 120
Query: 102 RHHCPHTPILLVGTKLDLRDDKDTIERLRDKKLAPITYPQGLAMAREIGSVKYLECSALT 161
RHHCP+TPI+LVGTKLDLRDDKDTIE+L++KKL PITYPQGLAMA+EIG+VKYLECSALT
Sbjct: 121 RHHCPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALT 180
Query: 162 QRGLKTVFDEAIRAVLCPPPVKKPGKKC 189
QRGLKTVFDEAIRAVLCPPPVKK +KC
Sbjct: 181 QRGLKTVFDEAIRAVLCPPPVKKRKRKC 208
>gi|4506381 ras-related C3 botulinum toxin substrate 2 [Homo
sapiens]
Length = 192
Score = 359 bits (921), Expect = e-100
Identities = 170/191 (89%), Positives = 183/191 (95%)
Query: 1 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG 60
MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVD KPVNLGLWDTAG
Sbjct: 1 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDSKPVNLGLWDTAG 60
Query: 61 QEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPHTPILLVGTKLDLR 120
QEDYDRLRPLSYPQTDVFLICFSLVSPAS+ENVRAKW+PEVRHHCP TPI+LVGTKLDLR
Sbjct: 61 QEDYDRLRPLSYPQTDVFLICFSLVSPASYENVRAKWFPEVRHHCPSTPIILVGTKLDLR 120
Query: 121 DDKDTIERLRDKKLAPITYPQGLAMAREIGSVKYLECSALTQRGLKTVFDEAIRAVLCPP 180
DDKDTIE+L++KKLAPITYPQGLA+A+EI SVKYLECSALTQRGLKTVFDEAIRAVLCP
Sbjct: 121 DDKDTIEKLKEKKLAPITYPQGLALAKEIDSVKYLECSALTQRGLKTVFDEAIRAVLCPQ 180
Query: 181 PVKKPGKKCTV 191
P ++ + C++
Sbjct: 181 PTRQQKRACSL 191
>gi|16357472 cell division cycle 42 isoform 2 [Homo sapiens]
Length = 191
Score = 284 bits (727), Expect = 3e-77
Identities = 135/192 (70%), Positives = 156/192 (81%), Gaps = 1/192 (0%)
Query: 1 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG 60
MQ IKCVVVGDGAVGKTCLLISYTTN FP EY+PTVFDNY+ VM+ G+P LGL+DTAG
Sbjct: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 60
Query: 61 QEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPHTPILLVGTKLDLR 120
QEDYDRLRPLSYPQTDVFL+CFS+VSP+SFENV+ KW PE+ HHCP TP LLVGT++DLR
Sbjct: 61 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLR 120
Query: 121 DDKDTIERLRDKKLAPITYPQGLAMAREIGSVKYLECSALTQRGLKTVFDEAIRAVLCPP 180
DD TIE+L K PIT +AR++ +VKY+ECSALTQRGLK VFDEAI A L P
Sbjct: 121 DDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQRGLKNVFDEAILAAL-EP 179
Query: 181 PVKKPGKKCTVF 192
P +P +KC +F
Sbjct: 180 PETQPKRKCCIF 191
>gi|89903012 cell division cycle 42 isoform 1 [Homo sapiens]
Length = 191
Score = 280 bits (715), Expect = 7e-76
Identities = 133/191 (69%), Positives = 155/191 (81%), Gaps = 1/191 (0%)
Query: 1 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG 60
MQ IKCVVVGDGAVGKTCLLISYTTN FP EY+PTVFDNY+ VM+ G+P LGL+DTAG
Sbjct: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 60
Query: 61 QEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPHTPILLVGTKLDLR 120
QEDYDRLRPLSYPQTDVFL+CFS+VSP+SFENV+ KW PE+ HHCP TP LLVGT++DLR
Sbjct: 61 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLR 120
Query: 121 DDKDTIERLRDKKLAPITYPQGLAMAREIGSVKYLECSALTQRGLKTVFDEAIRAVLCPP 180
DD TIE+L K PIT +AR++ +VKY+ECSALTQ+GLK VFDEAI A L PP
Sbjct: 121 DDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPP 180
Query: 181 PVKKPGKKCTV 191
KK ++C +
Sbjct: 181 EPKK-SRRCVL 190
>gi|4757952 cell division cycle 42 isoform 1 [Homo sapiens]
Length = 191
Score = 280 bits (715), Expect = 7e-76
Identities = 133/191 (69%), Positives = 155/191 (81%), Gaps = 1/191 (0%)
Query: 1 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG 60
MQ IKCVVVGDGAVGKTCLLISYTTN FP EY+PTVFDNY+ VM+ G+P LGL+DTAG
Sbjct: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAG 60
Query: 61 QEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPHTPILLVGTKLDLR 120
QEDYDRLRPLSYPQTDVFL+CFS+VSP+SFENV+ KW PE+ HHCP TP LLVGT++DLR
Sbjct: 61 QEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDLR 120
Query: 121 DDKDTIERLRDKKLAPITYPQGLAMAREIGSVKYLECSALTQRGLKTVFDEAIRAVLCPP 180
DD TIE+L K PIT +AR++ +VKY+ECSALTQ+GLK VFDEAI A L PP
Sbjct: 121 DDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLKNVFDEAILAALEPP 180
Query: 181 PVKKPGKKCTV 191
KK ++C +
Sbjct: 181 EPKK-SRRCVL 190
>gi|46249393 ras homolog gene family, member G [Homo sapiens]
Length = 191
Score = 276 bits (706), Expect = 8e-75
Identities = 134/189 (70%), Positives = 156/189 (82%), Gaps = 1/189 (0%)
Query: 1 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG 60
MQ+IKCVVVGDGAVGKTCLLI YTTNAFP EYIPTVFDNYSA VDG+ VNL LWDTAG
Sbjct: 1 MQSIKCVVVGDGAVGKTCLLICYTTNAFPKEYIPTVFDNYSAQSAVDGRTVNLNLWDTAG 60
Query: 61 QEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPHTPILLVGTKLDLR 120
QE+YDRLR LSYPQT+VF+ICFS+ SP S+ENVR KW+PEV HHCP PILLVGTK DLR
Sbjct: 61 QEEYDRLRTLSYPQTNVFVICFSIASPPSYENVRHKWHPEVCHHCPDVPILLVGTKKDLR 120
Query: 121 DDKDTIERLRDKKLAPITYPQGLAMAREIGSVKYLECSALTQRGLKTVFDEAIRAVLCPP 180
DT+ RL+++ APIT QG A+A++I +V+YLECSAL Q G+K VF EA+RAVL P
Sbjct: 121 AQPDTLRRLKEQGQAPITPQQGQALAKQIHAVRYLECSALQQDGVKEVFAEAVRAVLNPT 180
Query: 181 PVKKPGKKC 189
P+K+ G+ C
Sbjct: 181 PIKR-GRSC 188
>gi|50263042 ras-like protein TC10 [Homo sapiens]
Length = 205
Score = 250 bits (639), Expect = 5e-67
Identities = 120/189 (63%), Positives = 149/189 (78%), Gaps = 3/189 (1%)
Query: 4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQED 63
+KCVVVGDGAVGKTCLL+SY +AFP EY+PTVFD+Y+ +V V GK LGL+DTAGQED
Sbjct: 10 LKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQED 69
Query: 64 YDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPHTPILLVGTKLDLRDDK 123
YDRLRPLSYP TDVFLICFS+V+PASF+NV+ +W PE++ + P+ P LL+GT++DLRDD
Sbjct: 70 YDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRDDP 129
Query: 124 DTIERLRDKKLAPITYPQGLAMAREIGSVKYLECSALTQRGLKTVFDEAIRAVLCPPP-- 181
T+ RL D K PI QG +A+EIG+ Y+ECSALTQ+GLKTVFDEAI A+L P
Sbjct: 130 KTLARLNDMKEKPICVEQGQKLAKEIGACCYVECSALTQKGLKTVFDEAIIAILTPKKHT 189
Query: 182 -VKKPGKKC 189
K+ G +C
Sbjct: 190 VKKRIGSRC 198
>gi|16903164 ras homolog gene family, member J [Homo sapiens]
Length = 214
Score = 237 bits (605), Expect = 4e-63
Identities = 114/187 (60%), Positives = 144/187 (77%), Gaps = 3/187 (1%)
Query: 4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQED 63
+KCVVVGDGAVGKTCLL+SY +AFP EY+PTVFD+Y+ V V GK LGL+DTAGQED
Sbjct: 22 LKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVTVTVGGKQHLLGLYDTAGQED 81
Query: 64 YDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPHTPILLVGTKLDLRDDK 123
Y++LRPLSYP TDVFLICFS+V+PAS+ NV+ +W PE++ PH P +L+GT++DLRDD
Sbjct: 82 YNQLRPLSYPNTDVFLICFSVVNPASYHNVQEEWVPELKDCMPHVPYVLIGTQIDLRDDP 141
Query: 124 DTIERLRDKKLAPITYPQGLAMAREIGSVKYLECSALTQRGLKTVFDEAIRAVLCPPPVK 183
T+ RL K P+TY G+ +A+ IG+ YLECSALTQ+GLK VFDEAI + P K
Sbjct: 142 KTLARLLYMKEKPLTYEHGVKLAKAIGAQCYLECSALTQKGLKAVFDEAILTIFHP---K 198
Query: 184 KPGKKCT 190
K K+C+
Sbjct: 199 KKKKRCS 205
>gi|11034843 ras homolog gene family, member U [Homo sapiens]
Length = 258
Score = 214 bits (545), Expect = 4e-56
Identities = 102/174 (58%), Positives = 128/174 (73%)
Query: 2 QAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQ 61
+ +KCV+VGDGAVGKT L++SYTTN +P EYIPT FDN+SA V VDG+PV L L DTAGQ
Sbjct: 48 RGVKCVLVGDGAVGKTSLVVSYTTNGYPTEYIPTAFDNFSAVVSVDGRPVRLQLCDTAGQ 107
Query: 62 EDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPHTPILLVGTKLDLRD 121
+++D+LRPL Y TD+FL+CFS+VSP+SF+NV KW PE+R HCP PI+LVGT+ DLR+
Sbjct: 108 DEFDKLRPLCYTNTDIFLLCFSVVSPSSFQNVSEKWVPEIRCHCPKAPIILVGTQSDLRE 167
Query: 122 DKDTIERLRDKKLAPITYPQGLAMAREIGSVKYLECSALTQRGLKTVFDEAIRA 175
D + L K P+ A EI + Y+ECSALTQ+ LK VFD AI A
Sbjct: 168 DVKVLIELDKCKEKPVPEEAAKLCAEEIKAASYIECSALTQKNLKEVFDAAIVA 221
>gi|10835049 ras homolog gene family, member A [Homo sapiens]
Length = 193
Score = 211 bits (538), Expect = 2e-55
Identities = 101/173 (58%), Positives = 125/173 (72%)
Query: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQEDY 64
K V+VGDGA GKTCLLI ++ + FP Y+PTVF+NY A++ VDGK V L LWDTAGQEDY
Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66
Query: 65 DRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPHTPILLVGTKLDLRDDKD 124
DRLRPLSYP TDV L+CFS+ SP S EN+ KW PEV+H CP+ PI+LVG K DLR+D+
Sbjct: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEH 126
Query: 125 TIERLRDKKLAPITYPQGLAMAREIGSVKYLECSALTQRGLKTVFDEAIRAVL 177
T L K P+ +G MA IG+ Y+ECSA T+ G++ VF+ A RA L
Sbjct: 127 TRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREVFEMATRAAL 179
>gi|111494251 ras homolog gene family, member C precursor [Homo
sapiens]
Length = 193
Score = 209 bits (533), Expect = 9e-55
Identities = 101/173 (58%), Positives = 123/173 (71%)
Query: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQEDY 64
K V+VGDGA GKTCLLI ++ + FP Y+PTVF+NY A++ VDGK V L LWDTAGQEDY
Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYIADIEVDGKQVELALWDTAGQEDY 66
Query: 65 DRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPHTPILLVGTKLDLRDDKD 124
DRLRPLSYP TDV L+CFS+ SP S EN+ KW PEV+H CP+ PI+LVG K DLR D+
Sbjct: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRQDEH 126
Query: 125 TIERLRDKKLAPITYPQGLAMAREIGSVKYLECSALTQRGLKTVFDEAIRAVL 177
T L K P+ +G MA I + YLECSA T+ G++ VF+ A RA L
Sbjct: 127 TRRELAKMKQEPVRSEEGRDMANRISAFGYLECSAKTKEGVREVFEMATRAGL 179
>gi|111494248 ras homolog gene family, member C precursor [Homo
sapiens]
Length = 193
Score = 209 bits (533), Expect = 9e-55
Identities = 101/173 (58%), Positives = 123/173 (71%)
Query: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQEDY 64
K V+VGDGA GKTCLLI ++ + FP Y+PTVF+NY A++ VDGK V L LWDTAGQEDY
Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYIADIEVDGKQVELALWDTAGQEDY 66
Query: 65 DRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPHTPILLVGTKLDLRDDKD 124
DRLRPLSYP TDV L+CFS+ SP S EN+ KW PEV+H CP+ PI+LVG K DLR D+
Sbjct: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRQDEH 126
Query: 125 TIERLRDKKLAPITYPQGLAMAREIGSVKYLECSALTQRGLKTVFDEAIRAVL 177
T L K P+ +G MA I + YLECSA T+ G++ VF+ A RA L
Sbjct: 127 TRRELAKMKQEPVRSEEGRDMANRISAFGYLECSAKTKEGVREVFEMATRAGL 179
>gi|28395033 ras homolog gene family, member C precursor [Homo
sapiens]
Length = 193
Score = 209 bits (533), Expect = 9e-55
Identities = 101/173 (58%), Positives = 123/173 (71%)
Query: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQEDY 64
K V+VGDGA GKTCLLI ++ + FP Y+PTVF+NY A++ VDGK V L LWDTAGQEDY
Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYIADIEVDGKQVELALWDTAGQEDY 66
Query: 65 DRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPHTPILLVGTKLDLRDDKD 124
DRLRPLSYP TDV L+CFS+ SP S EN+ KW PEV+H CP+ PI+LVG K DLR D+
Sbjct: 67 DRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRQDEH 126
Query: 125 TIERLRDKKLAPITYPQGLAMAREIGSVKYLECSALTQRGLKTVFDEAIRAVL 177
T L K P+ +G MA I + YLECSA T+ G++ VF+ A RA L
Sbjct: 127 TRRELAKMKQEPVRSEEGRDMANRISAFGYLECSAKTKEGVREVFEMATRAGL 179
>gi|229577148 ras homolog gene family, member V [Homo sapiens]
Length = 236
Score = 208 bits (530), Expect = 2e-54
Identities = 98/175 (56%), Positives = 126/175 (72%), Gaps = 1/175 (0%)
Query: 4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQED 63
IKCV+VGDGAVGK+ L++SYT N +P Y PT D +S V+VDG PV + LWDTAGQED
Sbjct: 32 IKCVLVGDGAVGKSSLIVSYTCNGYPARYRPTALDTFSVQVLVDGAPVRIELWDTAGQED 91
Query: 64 YDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPHTPILLVGTKLDLRDDK 123
+DRLR L YP TDVFL CFS+V P+SF+N+ KW PE+R H P P+LLVGT+ DLRDD
Sbjct: 92 FDRLRSLCYPDTDVFLACFSVVQPSSFQNITEKWLPEIRTHNPQAPVLLVGTQADLRDDV 151
Query: 124 DTIERL-RDKKLAPITYPQGLAMAREIGSVKYLECSALTQRGLKTVFDEAIRAVL 177
+ + +L + + P+ PQ +A +I + YLECSALTQ+ LK VFD AI + +
Sbjct: 152 NVLIQLDQGGREGPVPQPQAQGLAEKIRACCYLECSALTQKNLKEVFDSAILSAI 206
>gi|4757764 ras homolog gene family, member B [Homo sapiens]
Length = 196
Score = 206 bits (525), Expect = 8e-54
Identities = 101/173 (58%), Positives = 121/173 (69%)
Query: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQEDY 64
K VVVGDGA GKTCLLI ++ + FP Y+PTVF+NY A++ VDGK V L LWDTAGQEDY
Sbjct: 7 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDY 66
Query: 65 DRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPHTPILLVGTKLDLRDDKD 124
DRLRPLSYP TDV L+CFS+ SP S EN+ KW PEV+H CP+ PI+LV K DLR D+
Sbjct: 67 DRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRSDEH 126
Query: 125 TIERLRDKKLAPITYPQGLAMAREIGSVKYLECSALTQRGLKTVFDEAIRAVL 177
L K P+ G AMA I + YLECSA T+ G++ VF+ A RA L
Sbjct: 127 VRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAAL 179
>gi|7656900 ras homolog D [Homo sapiens]
Length = 210
Score = 200 bits (509), Expect = 5e-52
Identities = 92/177 (51%), Positives = 118/177 (66%)
Query: 1 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG 60
++++K V+VGDG GKT LL+ + AFP Y PTVF+ Y N+ V GKPV+L +WDTAG
Sbjct: 15 VRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAG 74
Query: 61 QEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPHTPILLVGTKLDLR 120
Q+DYDRLRPL YP V L+CF + SP SF+N+ +WYPEV H C PI++VG K DLR
Sbjct: 75 QDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLR 134
Query: 121 DDKDTIERLRDKKLAPITYPQGLAMAREIGSVKYLECSALTQRGLKTVFDEAIRAVL 177
DK + +LR L P+TY +G MAR +G+V YLECSA + VF EA L
Sbjct: 135 KDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDNVHAVFQEAAEVAL 191
>gi|38016957 ras homolog gene family, member F [Homo sapiens]
Length = 211
Score = 187 bits (475), Expect = 5e-48
Identities = 88/174 (50%), Positives = 120/174 (68%)
Query: 4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQED 63
+K V+VGDG GKT LL+ Y+ +FP Y P+VF+ Y+A+V V K V L L+DTAGQED
Sbjct: 20 LKIVIVGDGGCGKTSLLMVYSQGSFPEHYAPSVFEKYTASVTVGSKEVTLNLYDTAGQED 79
Query: 64 YDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPHTPILLVGTKLDLRDDK 123
YDRLRPLSY T + LIC+ +++P S++NV KW+PEV H C P++L+G K DLR DK
Sbjct: 80 YDRLRPLSYQNTHLVLICYDVMNPTSYDNVLIKWFPEVTHFCRGIPMVLIGCKTDLRKDK 139
Query: 124 DTIERLRDKKLAPITYPQGLAMAREIGSVKYLECSALTQRGLKTVFDEAIRAVL 177
+ + +LR +L PITY QGL+ +I + YLECSA + ++ VF EA + L
Sbjct: 140 EQLRKLRAAQLEPITYMQGLSACEQIRAALYLECSAKFRENVEDVFREAAKVAL 193
>gi|4885581 Rho family GTPase 2 [Homo sapiens]
Length = 227
Score = 166 bits (419), Expect = 1e-41
Identities = 75/174 (43%), Positives = 115/174 (66%), Gaps = 1/174 (0%)
Query: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQEDY 64
K VVVGD GKT LL + +A+PG Y+PTVF+NY+A+ +D + + L +WDT+G Y
Sbjct: 9 KIVVVGDAECGKTALLQVFAKDAYPGSYVPTVFENYTASFEIDKRRIELNMWDTSGSSYY 68
Query: 65 DRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPHTPILLVGTKLDLRDDKD 124
D +RPL+YP +D LICF + P + ++V KW E + CP+ ++LVG KLD+R D
Sbjct: 69 DNVRPLAYPDSDAVLICFDISRPETLDSVLKKWQGETQEFCPNAKVVLVGCKLDMRTDLA 128
Query: 125 TIERLRDKKLAPITYPQGLAMAREIGSVKYLECSA-LTQRGLKTVFDEAIRAVL 177
T+ L ++L P+T+ QG +A+++G+V Y+ECS+ ++R ++ VF A A L
Sbjct: 129 TLRELSKQRLIPVTHEQGTVLAKQVGAVSYVECSSRSSERSVRDVFHVATVASL 182
>gi|4885069 ras homolog gene family, member E [Homo sapiens]
Length = 244
Score = 164 bits (416), Expect = 3e-41
Identities = 79/177 (44%), Positives = 114/177 (64%), Gaps = 3/177 (1%)
Query: 2 QAIKC--VVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTA 59
Q +KC VVVGD GKT LL + + FP Y+PTVF+NY+A+ +D + + L LWDT+
Sbjct: 20 QNVKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTS 79
Query: 60 GQEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPHTPILLVGTKLDL 119
G YD +RPLSYP +D LICF + P + ++V KW E++ CP+T +LLVG K DL
Sbjct: 80 GSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDL 139
Query: 120 RDDKDTIERLRDKKLAPITYPQGLAMAREIGSVKYLECSAL-TQRGLKTVFDEAIRA 175
R D T+ L + + P++Y QG MA++IG+ Y+ECSAL ++ ++ +F A A
Sbjct: 140 RTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATLA 196
>gi|4757770 ras homolog gene family, member H [Homo sapiens]
Length = 191
Score = 155 bits (392), Expect = 2e-38
Identities = 74/177 (41%), Positives = 117/177 (66%), Gaps = 7/177 (3%)
Query: 1 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG 60
+ +IKCV+VGD AVGKT LL+ +T+ FP Y PTV++N +V +DG ++LGLWDTAG
Sbjct: 2 LSSIKCVLVGDSAVGKTSLLVRFTSETFPEAYKPTVYENTGVDVFMDGIQISLGLWDTAG 61
Query: 61 QEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPHTPILLVGTKLDLR 120
+ + +RPLSY Q DV L+C+S+ + SF N++ KW E+R + P TP+L+V T+ D R
Sbjct: 62 NDAFRSIRPLSYQQADVVLMCYSVANHNSFLNLKNKWIGEIRSNLPCTPVLVVATQTDQR 121
Query: 121 DDKDTIERLRDKKLAPITYPQGLAMAREIGSVKYLECSALTQRGLKTVFDEAIRAVL 177
+ + + + + +G +A+++ + YLECSAL+ RG++ VF+ A+R +
Sbjct: 122 E-------MGPHRASCVNAMEGKKLAQDVRAKGYLECSALSNRGVQQVFECAVRTAV 171
>gi|7657514 GTP-binding protein RHO6 [Homo sapiens]
Length = 232
Score = 147 bits (370), Expect = 7e-36
Identities = 76/187 (40%), Positives = 113/187 (60%), Gaps = 8/187 (4%)
Query: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQEDY 64
K V+VGD GKT +L + +P Y+PTVF+NY+A + + + V L LWDT+G Y
Sbjct: 15 KLVLVGDVQCGKTAMLQVLAKDCYPETYVPTVFENYTACLETEEQRVELSLWDTSGSPYY 74
Query: 65 DRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPHTPILLVGTKLDLRDDKD 124
D +RPL Y +D L+CF + P + ++ KW E+ +CP T +LL+G K DLR D
Sbjct: 75 DNVRPLCYSDSDAVLLCFDISRPETVDSALKKWRTEILDYCPSTRVLLIGCKTDLRTDLS 134
Query: 125 TIERLRDKKLAPITYPQGLAMAREIGSVKYLECSALT-QRGLKTVFDEAIRAVLC----- 178
T+ L +K API+Y QG A+A+++G+ YLE SA T ++ + ++F A ++LC
Sbjct: 135 TLMELSHQKQAPISYEQGCAIAKQLGAEIYLEGSAFTSEKSIHSIFRTA--SMLCLNKPS 192
Query: 179 PPPVKKP 185
P P K P
Sbjct: 193 PLPQKSP 199
>gi|237649113 Rho-related BTB domain containing 2 isoform 3 [Homo
sapiens]
Length = 727
Score = 130 bits (327), Expect = 7e-31
Identities = 80/200 (40%), Positives = 115/200 (57%), Gaps = 26/200 (13%)
Query: 1 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEY------IPTVF--DNYS--------ANV 44
++ IKCVVVGD AVGKT L+ + NA +Y +PTV+ D Y +
Sbjct: 12 VETIKCVVVGDNAVGKTRLICARACNATLTQYQLLATHVPTVWAIDQYRVCQEVLERSRD 71
Query: 45 MVDGKPVNLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHH 104
+VD V+L LWDT G D+ + R +Y ++DV ++CFS+ +P S +V+ WYPE++H
Sbjct: 72 VVDDVSVSLRLWDTFG--DHHKDRRFAYGRSDVVVLCFSIANPNSLHHVKTMWYPEIKHF 129
Query: 105 CPHTPILLVGTKLDLR-DDKDTIERLRDKKLAPI------TYPQGLAMAREIGSVKYLEC 157
CP P++LVG +LDLR D + + R R PI +G +A+E+G + Y E
Sbjct: 130 CPRAPVILVGCQLDLRYADLEAVNRARRPLARPIKPNEILPPEKGREVAKELG-IPYYET 188
Query: 158 SALTQRGLKTVFDEAIRAVL 177
S + Q G+K VFD AIRA L
Sbjct: 189 SVVAQFGIKDVFDNAIRAAL 208
>gi|237649111 Rho-related BTB domain containing 2 isoform 2 [Homo
sapiens]
Length = 734
Score = 130 bits (327), Expect = 7e-31
Identities = 80/200 (40%), Positives = 115/200 (57%), Gaps = 26/200 (13%)
Query: 1 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEY------IPTVF--DNYS--------ANV 44
++ IKCVVVGD AVGKT L+ + NA +Y +PTV+ D Y +
Sbjct: 19 VETIKCVVVGDNAVGKTRLICARACNATLTQYQLLATHVPTVWAIDQYRVCQEVLERSRD 78
Query: 45 MVDGKPVNLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHH 104
+VD V+L LWDT G D+ + R +Y ++DV ++CFS+ +P S +V+ WYPE++H
Sbjct: 79 VVDDVSVSLRLWDTFG--DHHKDRRFAYGRSDVVVLCFSIANPNSLHHVKTMWYPEIKHF 136
Query: 105 CPHTPILLVGTKLDLR-DDKDTIERLRDKKLAPI------TYPQGLAMAREIGSVKYLEC 157
CP P++LVG +LDLR D + + R R PI +G +A+E+G + Y E
Sbjct: 137 CPRAPVILVGCQLDLRYADLEAVNRARRPLARPIKPNEILPPEKGREVAKELG-IPYYET 195
Query: 158 SALTQRGLKTVFDEAIRAVL 177
S + Q G+K VFD AIRA L
Sbjct: 196 SVVAQFGIKDVFDNAIRAAL 215
>gi|237649109 Rho-related BTB domain containing 2 isoform 1 [Homo
sapiens]
Length = 749
Score = 130 bits (327), Expect = 7e-31
Identities = 80/200 (40%), Positives = 115/200 (57%), Gaps = 26/200 (13%)
Query: 1 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEY------IPTVF--DNYS--------ANV 44
++ IKCVVVGD AVGKT L+ + NA +Y +PTV+ D Y +
Sbjct: 34 VETIKCVVVGDNAVGKTRLICARACNATLTQYQLLATHVPTVWAIDQYRVCQEVLERSRD 93
Query: 45 MVDGKPVNLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHH 104
+VD V+L LWDT G D+ + R +Y ++DV ++CFS+ +P S +V+ WYPE++H
Sbjct: 94 VVDDVSVSLRLWDTFG--DHHKDRRFAYGRSDVVVLCFSIANPNSLHHVKTMWYPEIKHF 151
Query: 105 CPHTPILLVGTKLDLR-DDKDTIERLRDKKLAPI------TYPQGLAMAREIGSVKYLEC 157
CP P++LVG +LDLR D + + R R PI +G +A+E+G + Y E
Sbjct: 152 CPRAPVILVGCQLDLRYADLEAVNRARRPLARPIKPNEILPPEKGREVAKELG-IPYYET 210
Query: 158 SALTQRGLKTVFDEAIRAVL 177
S + Q G+K VFD AIRA L
Sbjct: 211 SVVAQFGIKDVFDNAIRAAL 230
>gi|28629866 Rho-related BTB domain containing 1 [Homo sapiens]
Length = 696
Score = 129 bits (325), Expect = 1e-30
Identities = 80/200 (40%), Positives = 115/200 (57%), Gaps = 26/200 (13%)
Query: 1 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEY------IPTVF--DNYS--------ANV 44
++ IKCVVVGD AVGKT L+ + N +Y +PTV+ D Y +
Sbjct: 12 VETIKCVVVGDNAVGKTRLICARACNTTLTQYQLLATHVPTVWAIDQYRVCQEVLERSRD 71
Query: 45 MVDGKPVNLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHH 104
+VD V+L LWDT G D+ + R +Y ++DV ++CFS+ +P S +V++ WYPE++H
Sbjct: 72 VVDEVSVSLRLWDTFG--DHHKDRRFAYGRSDVVVLCFSIANPNSLNHVKSMWYPEIKHF 129
Query: 105 CPHTPILLVGTKLDLR-DDKDTIERLRDKKLAPITY------PQGLAMAREIGSVKYLEC 157
CP TP++LVG +LDLR D + + R R PI +G +A+E+G + Y E
Sbjct: 130 CPRTPVILVGCQLDLRYADLEAVNRARRPLARPIKRGDILPPEKGREVAKELG-LPYYET 188
Query: 158 SALTQRGLKTVFDEAIRAVL 177
S Q G+K VFD AIRA L
Sbjct: 189 SVFDQFGIKDVFDNAIRAAL 208
>gi|5902050 Ras-like without CAAX 1 [Homo sapiens]
Length = 219
Score = 91.7 bits (226), Expect = 4e-19
Identities = 56/173 (32%), Positives = 89/173 (51%), Gaps = 14/173 (8%)
Query: 5 KCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAGQEDY 64
K V++G G VGK+ + + + ++ FP ++ PT+ D Y + +D +P NL + DTAGQ ++
Sbjct: 23 KLVMLGAGGVGKSAMTMQFISHRFPEDHDPTIEDAYKIRIRIDDEPANLDILDTAGQAEF 82
Query: 65 DRLRPLSYPQTDVFLICFSLVSPASFENVRA-KWYPEVRHHCPHTPILLVGTKLDLRDDK 123
+R + F+IC+S+ SF VR K TP++LVG K DL
Sbjct: 83 TAMRDQYMRAGEGFIICYSITDRRSFHEVREFKQLIYRVRRTDDTPVVLVGNKSDL---- 138
Query: 124 DTIERLRDKKLAPITYPQGLAMAREIGSVKYLECSALTQRGLKTVFDEAIRAV 176
K+L +T +GLA+ARE S + E SA + + VF +R +
Sbjct: 139 --------KQLRQVTKEEGLALAREF-SCPFFETSAAYRYYIDDVFHALVREI 182
>gi|7705963 RAB9B, member RAS oncogene family [Homo sapiens]
Length = 201
Score = 90.1 bits (222), Expect = 1e-18
Identities = 59/180 (32%), Positives = 88/180 (48%), Gaps = 20/180 (11%)
Query: 4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNY-SANVMVDGKPVNLGLWDTAGQE 62
+K +++GDG VGK+ L+ Y TN F + T+ + + ++ VDG+ V L +WDTAGQE
Sbjct: 8 LKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQE 67
Query: 63 DYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHC-----PHTPILLVGTKL 117
+ LR Y D L+ FS+ SFEN+ W E ++ H P +++G K+
Sbjct: 68 RFKSLRTPFYRGADCCLLTFSVDDRQSFENL-GNWQKEFIYYADVKDPEHFPFVVLGNKV 126
Query: 118 DLRDDKDTIERLRDKKLAPITYPQGLAMAREIGSVKYLECSALTQRGLKTVFDEAIRAVL 177
D D + T E + E G YLE SA + F+EA+R VL
Sbjct: 127 DKEDRQVTTE-------------EAQTWCMENGDYPYLETSAKDDTNVTVAFEEAVRQVL 173
>gi|38201690 RAP2B, member of RAS oncogene family [Homo sapiens]
Length = 183
Score = 89.0 bits (219), Expect = 2e-18
Identities = 54/175 (30%), Positives = 91/175 (52%), Gaps = 14/175 (8%)
Query: 1 MQAIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTAG 60
M+ K VV+G G VGK+ L + + T +F +Y PT+ D Y + VD P L + DTAG
Sbjct: 1 MREYKVVVLGSGGVGKSALTVQFVTGSFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAG 60
Query: 61 QEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVR-HHCPHTPILLVGTKLDL 119
E + +R L F++ +SLV+ SF++++ +R P++LVG K+DL
Sbjct: 61 TEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIKPMRDQIIRVKRYERVPMILVGNKVDL 120
Query: 120 RDDKDTIERLRDKKLAPITYPQGLAMAREIGSVKYLECSALTQRGLKTVFDEAIR 174
+++ ++Y +G A+A E S ++E SA + + +F E +R
Sbjct: 121 EGERE------------VSYGEGKALAEE-WSCPFMETSAKNKASVDELFAEIVR 162
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.139 0.436
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,017,826
Number of Sequences: 37866
Number of extensions: 340982
Number of successful extensions: 953
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 172
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 629
Number of HSP's gapped (non-prelim): 200
length of query: 192
length of database: 18,247,518
effective HSP length: 97
effective length of query: 95
effective length of database: 14,574,516
effective search space: 1384579020
effective search space used: 1384579020
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.