Guide to the Human Genome
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Name: RAC1 Sequence: fasta or formatted (192aa) NCBI GI: 9845511
Description:

ras-related C3 botulinum toxin substrate 1 isoform Rac1

Referenced in:

ADP-Ribosylation Factors
Rho and Rac
Superoxide Pathway

Other entries for this name:
alt prot [211aa] ras-related C3 botulinum toxin substrate 1 isoform Rac1b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         13           1
 C cysteine            3.6          7           1
 D aspartate           6.2         12           2
 E glutamate           4.7          9           1
 F phenylalanine       3.1          6           1
 G glycine             5.7         11           1
 H histidine           1.0          2           2
 I isoleucine          5.2         10           2
 K lysine              8.9         17           2
 L leucine            10.9         21           3
 M methionine          1.6          3           1
 N asparagine          3.1          6           1
 P proline             7.3         14           3
 Q glutamine           2.6          5           1
 R arginine            4.7          9           1
 S serine              3.6          7           1
 T threonine           6.8         13           2
 V valine              8.9         17           3
 W tryptophan          1.0          2           1
 Y tyrosine            4.2          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ras-related C3 botulinum toxin substrate 1 isoform Ra... 
RAC1                  0.968   ras-related C3 botulinum toxin substrate 1 isoform Ra...
RAC3                  0.941   ras-related C3 botulinum toxin substrate 3 (rho famil...
RAC2                  0.927   ras-related C3 botulinum toxin substrate 2 
CDC42                 0.701   cell division cycle 42 isoform 1 
CDC42                 0.701   cell division cycle 42 isoform 1 
CDC42                 0.698   cell division cycle 42 isoform 2 
RHOG                  0.690   ras homolog gene family, member G 
RHOQ                  0.609   ras-like protein TC10 
RHOJ                  0.577   ras homolog gene family, member J 
RHOA                  0.523   ras homolog gene family, member A 
RHOU                  0.520   ras homolog gene family, member U 
RHOC                  0.520   ras homolog gene family, member C precursor 
RHOC                  0.520   ras homolog gene family, member C precursor 
RHOC                  0.520   ras homolog gene family, member C precursor 
RHOB                  0.504   ras homolog gene family, member B 
RHOV                  0.496   ras homolog gene family, member V 
RHOD                  0.477   ras homolog D 
RHOF                  0.461   ras homolog gene family, member F 
RND2                  0.396   Rho family GTPase 2 
RND3                  0.391   ras homolog gene family, member E 
RHOH                  0.356   ras homolog gene family, member H 
RND1                  0.329   GTP-binding protein RHO6 
RHOBTB2               0.283   Rho-related BTB domain containing 2 isoform 3 [Homo...
RHOBTB2               0.283   Rho-related BTB domain containing 2 isoform 2 [Homo...
RHOBTB2               0.283   Rho-related BTB domain containing 2 isoform 1 [Homo...
RHOBTB1               0.283   Rho-related BTB domain containing 1 
RIT1                  0.178   Ras-like without CAAX 1 
RAB9B                 0.175   RAB9B, member RAS oncogene family 
RAP2B                 0.173   RAP2B, member of RAS oncogene family 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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