Guide to the Human Genome
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Name: RHOB Sequence: fasta or formatted (196aa) NCBI GI: 4757764
Description:

ras homolog gene family, member B

Referenced in:

Rho and Rac

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         15           2
 C cysteine            4.1          8           2
 D aspartate           8.2         16           2
 E glutamate           8.2         16           1
 F phenylalanine       3.1          6           1
 G glycine             4.6          9           1
 H histidine           1.0          2           1
 I isoleucine          4.6          9           2
 K lysine              7.1         14           2
 L leucine             7.7         15           2
 M methionine          2.0          4           1
 N asparagine          3.1          6           1
 P proline             5.1         10           1
 Q glutamine           3.1          6           1
 R arginine            6.1         12           1
 S serine              4.1          8           1
 T threonine           4.6          9           1
 V valine             11.2         22           3
 W tryptophan          1.0          2           1
 Y tyrosine            3.6          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ras homolog gene family, member B 
RHOA                  0.828   ras homolog gene family, member A 
RHOC                  0.825   ras homolog gene family, member C precursor 
RHOC                  0.825   ras homolog gene family, member C precursor 
RHOC                  0.825   ras homolog gene family, member C precursor 
RAC1                  0.496   ras-related C3 botulinum toxin substrate 1 isoform Ra...
RHOQ                  0.485   ras-like protein TC10 
RAC3                  0.480   ras-related C3 botulinum toxin substrate 3 (rho famil...
RAC2                  0.480   ras-related C3 botulinum toxin substrate 2 
RHOG                  0.469   ras homolog gene family, member G 
RAC1                  0.464   ras-related C3 botulinum toxin substrate 1 isoform Ra...
CDC42                 0.464   cell division cycle 42 isoform 1 
CDC42                 0.464   cell division cycle 42 isoform 1 
CDC42                 0.462   cell division cycle 42 isoform 2 
RHOD                  0.454   ras homolog D 
RND3                  0.443   ras homolog gene family, member E 
RHOJ                  0.424   ras homolog gene family, member J 
RHOF                  0.419   ras homolog gene family, member F 
RND2                  0.416   Rho family GTPase 2 
RHOU                  0.414   ras homolog gene family, member U 
RND1                  0.371   GTP-binding protein RHO6 
RHOV                  0.369   ras homolog gene family, member V 
RHOH                  0.334   ras homolog gene family, member H 
RHOBTB2               0.207   Rho-related BTB domain containing 2 isoform 3 [Homo...
RHOBTB2               0.207   Rho-related BTB domain containing 2 isoform 2 [Homo...
RHOBTB2               0.207   Rho-related BTB domain containing 2 isoform 1 [Homo...
RHOBTB1               0.207   Rho-related BTB domain containing 1 
HRAS                  0.175   v-Ha-ras Harvey rat sarcoma viral oncogene homolog ...
HRAS                  0.175   v-Ha-ras Harvey rat sarcoma viral oncogene homolog is...
RALB                  0.175   v-ral simian leukemia viral oncogene homolog B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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