Guide to the Human Genome
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Name: RIT1 Sequence: fasta or formatted (219aa) NCBI GI: 5902050
Description:

Ras-like without CAAX 1

Referenced in:

Ras

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.3         16           2
 C cysteine            1.8          4           2
 D aspartate           7.3         16           2
 E glutamate           7.3         16           2
 F phenylalanine       5.0         11           2
 G glycine             5.5         12           2
 H histidine           1.8          4           1
 I isoleucine          5.5         12           2
 K lysine              8.2         18           3
 L leucine             6.4         14           1
 M methionine          3.2          7           1
 N asparagine          1.4          3           1
 P proline             4.1          9           1
 Q glutamine           2.7          6           1
 R arginine            9.6         21           2
 S serine              7.3         16           2
 T threonine           5.0         11           1
 V valine              6.4         14           2
 W tryptophan          0.5          1           1
 Y tyrosine            3.7          8           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Ras-like without CAAX 1 
RIT2                  0.642   Ras-like without CAAX 2 
RRAS2                 0.394   related RAS viral (r-ras) oncogene homolog 2 isoform...
KRAS                  0.382   c-K-ras2 protein isoform b precursor 
KRAS                  0.368   c-K-ras2 protein isoform a precursor 
RAP1B                 0.368   RAP1B, member of RAS oncogene family 
RAP1B                 0.368   RAP1B, member of RAS oncogene family 
HRAS                  0.365   v-Ha-ras Harvey rat sarcoma viral oncogene homolog ...
HRAS                  0.365   v-Ha-ras Harvey rat sarcoma viral oncogene homolog is...
RAP1A                 0.365   RAP1A, member of RAS oncogene family 
RAP1A                 0.365   RAP1A, member of RAS oncogene family 
RAP2A                 0.363   RAP2A, member of RAS oncogene family 
MRAS                  0.361   muscle RAS oncogene homolog 
MRAS                  0.361   muscle RAS oncogene homolog 
NRAS                  0.358   neuroblastoma RAS viral (v-ras) oncogene homolog [Hom...
RAP2C                 0.358   RAP2C, member of RAS oncogene family 
RRAS                  0.358   related RAS viral (r-ras) oncogene homolog 
RAP2B                 0.356   RAP2B, member of RAS oncogene family 
RALA                  0.334   ras related v-ral simian leukemia viral oncogene hom...
RALB                  0.332   v-ral simian leukemia viral oncogene homolog B 
HRAS                  0.325   v-Ha-ras Harvey rat sarcoma viral oncogene homolog i...
LOC100133211          0.308   PREDICTED: similar to related RAS viral (r-ras) onc...
LOC100133211          0.308   PREDICTED: similar to related RAS viral (r-ras) onc...
LOC100133211          0.308   PREDICTED: similar to related RAS viral (r-ras) onc...
RERG                  0.298   RAS-like, estrogen-regulated, growth inhibitor [Homo...
GEM                   0.240   GTP-binding mitogen-induced T-cell protein 
GEM                   0.240   GTP-binding mitogen-induced T-cell protein 
RASL12                0.238   RAS-like, family 12 protein 
DIRAS1                0.233   DIRAS family, GTP-binding RAS-like 1 
DIRAS2                0.231   Di-Ras2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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