Guide to the Human Genome
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Name: RHOQ Sequence: fasta or formatted (205aa) NCBI GI: 50263042
Description:

ras-like protein TC10

Referenced in:

Rho and Rac

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.3         15           1
 C cysteine            4.9         10           2
 D aspartate           5.9         12           2
 E glutamate           5.9         12           2
 F phenylalanine       3.4          7           1
 G glycine             6.8         14           2
 H histidine           1.5          3           1
 I isoleucine          5.4         11           2
 K lysine              7.8         16           2
 L leucine            10.2         21           2
 M methionine          2.4          5           1
 N asparagine          2.9          6           1
 P proline             5.9         12           1
 Q glutamine           3.4          7           1
 R arginine            2.9          6           1
 S serine              3.4          7           1
 T threonine           5.9         12           1
 V valine              9.3         19           3
 W tryptophan          0.5          1           1
 Y tyrosine            4.4          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ras-like protein TC10 
RHOJ                  0.721   ras homolog gene family, member J 
CDC42                 0.608   cell division cycle 42 isoform 2 
CDC42                 0.608   cell division cycle 42 isoform 1 
CDC42                 0.608   cell division cycle 42 isoform 1 
RAC1                  0.568   ras-related C3 botulinum toxin substrate 1 isoform Ra...
RAC3                  0.565   ras-related C3 botulinum toxin substrate 3 (rho famil...
RAC2                  0.550   ras-related C3 botulinum toxin substrate 2 
RAC1                  0.540   ras-related C3 botulinum toxin substrate 1 isoform Ra...
RHOG                  0.485   ras homolog gene family, member G 
RHOU                  0.462   ras homolog gene family, member U 
RHOB                  0.460   ras homolog gene family, member B 
RHOV                  0.455   ras homolog gene family, member V 
RHOA                  0.450   ras homolog gene family, member A 
RHOC                  0.445   ras homolog gene family, member C precursor 
RHOC                  0.445   ras homolog gene family, member C precursor 
RHOC                  0.445   ras homolog gene family, member C precursor 
RHOF                  0.397   ras homolog gene family, member F 
RHOD                  0.372   ras homolog D 
RND3                  0.349   ras homolog gene family, member E 
RND2                  0.319   Rho family GTPase 2 
RHOH                  0.312   ras homolog gene family, member H 
RND1                  0.279   GTP-binding protein RHO6 
RHOBTB2               0.224   Rho-related BTB domain containing 2 isoform 3 [Homo...
RHOBTB2               0.224   Rho-related BTB domain containing 2 isoform 2 [Homo...
RHOBTB2               0.224   Rho-related BTB domain containing 2 isoform 1 [Homo...
RHOBTB1               0.219   Rho-related BTB domain containing 1 
RALB                  0.168   v-ral simian leukemia viral oncogene homolog B 
RALA                  0.168   ras related v-ral simian leukemia viral oncogene hom...
RAP2A                 0.163   RAP2A, member of RAS oncogene family 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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