Guide to the Human Genome
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Name: RHOF Sequence: fasta or formatted (211aa) NCBI GI: 38016957
Description:

ras homolog gene family, member F

Referenced in:

Rho and Rac

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.0         19           2
 C cysteine            3.3          7           1
 D aspartate           4.7         10           1
 E glutamate           6.2         13           1
 F phenylalanine       2.8          6           1
 G glycine             6.2         13           2
 H histidine           1.4          3           1
 I isoleucine          3.8          8           1
 K lysine              7.6         16           2
 L leucine            11.8         25           3
 M methionine          2.4          5           1
 N asparagine          2.4          5           1
 P proline             4.7         10           1
 Q glutamine           4.7         10           1
 R arginine            6.2         13           2
 S serine              5.2         11           1
 T threonine           5.2         11           1
 V valine              7.1         15           1
 W tryptophan          0.5          1           1
 Y tyrosine            4.7         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ras homolog gene family, member F 
RHOD                  0.504   ras homolog D 
RAC2                  0.429   ras-related C3 botulinum toxin substrate 2 
RAC1                  0.426   ras-related C3 botulinum toxin substrate 1 isoform Ra...
RHOA                  0.416   ras homolog gene family, member A 
RHOC                  0.416   ras homolog gene family, member C precursor 
RHOC                  0.416   ras homolog gene family, member C precursor 
RHOC                  0.416   ras homolog gene family, member C precursor 
RAC3                  0.404   ras-related C3 botulinum toxin substrate 3 (rho famil...
RAC1                  0.397   ras-related C3 botulinum toxin substrate 1 isoform Ra...
RHOQ                  0.394   ras-like protein TC10 
RHOB                  0.394   ras homolog gene family, member B 
RHOG                  0.392   ras homolog gene family, member G 
RHOJ                  0.384   ras homolog gene family, member J 
CDC42                 0.379   cell division cycle 42 isoform 2 
CDC42                 0.374   cell division cycle 42 isoform 1 
CDC42                 0.374   cell division cycle 42 isoform 1 
RND3                  0.359   ras homolog gene family, member E 
RND2                  0.347   Rho family GTPase 2 
RHOU                  0.329   ras homolog gene family, member U 
RND1                  0.317   GTP-binding protein RHO6 
RHOV                  0.287   ras homolog gene family, member V 
RHOH                  0.237   ras homolog gene family, member H 
RRAS2                 0.147   related RAS viral (r-ras) oncogene homolog 2 isoform...
RHOBTB2               0.147   Rho-related BTB domain containing 2 isoform 3 [Homo...
RHOBTB2               0.147   Rho-related BTB domain containing 2 isoform 2 [Homo...
RHOBTB2               0.147   Rho-related BTB domain containing 2 isoform 1 [Homo...
RAB37                 0.147   RAB37, member RAS oncogene family isoform 3 
RAP2B                 0.147   RAP2B, member of RAS oncogene family 
RAP1A                 0.145   RAP1A, member of RAS oncogene family 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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