Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 13376109
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|13376109 hypothetical protein LOC79823 [Homo sapiens]
(323 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|13376109 hypothetical protein LOC79823 [Homo sapiens] 660 0.0
gi|42475946 hypothetical protein LOC196483 isoform 2 [Homo sapiens] 46 5e-05
gi|42476337 hypothetical protein LOC196483 isoform 1 [Homo sapiens] 43 3e-04
gi|239754822 PREDICTED: hypothetical protein LOC653333 [Homo sap... 40 0.002
gi|45827721 hypothetical protein LOC25895 isoform a [Homo sapiens] 40 0.003
gi|134133220 hypothetical protein LOC85002 [Homo sapiens] 39 0.008
gi|212549593 hypothetical protein LOC653333 [Homo sapiens] 36 0.053
gi|94536786 hypothetical protein LOC79091 [Homo sapiens] 34 0.15
gi|188528686 hypothetical protein LOC151194 [Homo sapiens] 34 0.20
gi|188528684 hypothetical protein LOC151194 [Homo sapiens] 34 0.20
gi|4503617 exostoses-like 3 [Homo sapiens] 33 0.45
gi|126012513 hypothetical protein LOC124512 [Homo sapiens] 33 0.45
gi|118498343 ATPase, Ca++ transporting, type 2C, member 2 [Homo ... 30 2.2
gi|209529731 hypothetical protein LOC254013 [Homo sapiens] 29 6.5
gi|209529729 hypothetical protein LOC254013 [Homo sapiens] 29 6.5
gi|28603834 hypothetical protein LOC254013 [Homo sapiens] 29 6.5
gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens] 28 8.4
gi|81295809 pericentrin [Homo sapiens] 28 8.4
>gi|13376109 hypothetical protein LOC79823 [Homo sapiens]
Length = 323
Score = 660 bits (1702), Expect = 0.0
Identities = 323/323 (100%), Positives = 323/323 (100%)
Query: 1 MESRVADAGTGETARAAGGSPAVGCTTRGPVVSAPLGAARWKLLRQVLKQKHLDDCLRHV 60
MESRVADAGTGETARAAGGSPAVGCTTRGPVVSAPLGAARWKLLRQVLKQKHLDDCLRHV
Sbjct: 1 MESRVADAGTGETARAAGGSPAVGCTTRGPVVSAPLGAARWKLLRQVLKQKHLDDCLRHV 60
Query: 61 SVRRFESFNLFSVTEGKERETEEEVGAWVQYTSIFCPEYSISLRHNSGSLNVEDVLTSFD 120
SVRRFESFNLFSVTEGKERETEEEVGAWVQYTSIFCPEYSISLRHNSGSLNVEDVLTSFD
Sbjct: 61 SVRRFESFNLFSVTEGKERETEEEVGAWVQYTSIFCPEYSISLRHNSGSLNVEDVLTSFD 120
Query: 121 NTGNVCIWPSEEVLAYYCLKHNNIFRALAVCELGGGMTCLAGLMVAISADVKEVLLTDGN 180
NTGNVCIWPSEEVLAYYCLKHNNIFRALAVCELGGGMTCLAGLMVAISADVKEVLLTDGN
Sbjct: 121 NTGNVCIWPSEEVLAYYCLKHNNIFRALAVCELGGGMTCLAGLMVAISADVKEVLLTDGN 180
Query: 181 EKAIRNVQDIITRNQKAGVFKTQKISSCVLRWDNETDVSQLEGHFDIVMCADCLFLDQYR 240
EKAIRNVQDIITRNQKAGVFKTQKISSCVLRWDNETDVSQLEGHFDIVMCADCLFLDQYR
Sbjct: 181 EKAIRNVQDIITRNQKAGVFKTQKISSCVLRWDNETDVSQLEGHFDIVMCADCLFLDQYR 240
Query: 241 ASLVDAIKRLLQPRGKAMVFAPRRGNTLNQFCNLAEKAGFCIQRHENYDEHISNFHSKLK 300
ASLVDAIKRLLQPRGKAMVFAPRRGNTLNQFCNLAEKAGFCIQRHENYDEHISNFHSKLK
Sbjct: 241 ASLVDAIKRLLQPRGKAMVFAPRRGNTLNQFCNLAEKAGFCIQRHENYDEHISNFHSKLK 300
Query: 301 KENPDIYEENLHYPLLLILTKHG 323
KENPDIYEENLHYPLLLILTKHG
Sbjct: 301 KENPDIYEENLHYPLLLILTKHG 323
>gi|42475946 hypothetical protein LOC196483 isoform 2 [Homo sapiens]
Length = 296
Score = 45.8 bits (107), Expect = 5e-05
Identities = 54/224 (24%), Positives = 91/224 (40%), Gaps = 23/224 (10%)
Query: 89 VQYTSIFCPEYSISLRHNSGSLNVEDVLTSFDNTGNVCIWPSEEVLAYYCLKHNNIFRAL 148
V+Y F E S +L+ + S+ TG V W + LA + +++ +F
Sbjct: 67 VKYARCFLSELIKKPSGGSVTLSESTAIISYGTTGLVT-WDAALYLAEWAIENPAVFTNR 125
Query: 149 AVCELGGGMTCLAGLMVAISADVKEVLLTDGNEKAIRNVQDIITRNQKA------GVFKT 202
V ELG G L GL + + + +D + + + ++ + N + +
Sbjct: 126 TVLELGSGAG-LTGLAICKMCRPRAYIFSDCHSRVLEQLRGNVLLNGLSLEADITAKLDS 184
Query: 203 QKISSCVLRWDNETDVSQLEGHF-DIVMCADCLFLDQYRASLVDAIKRLLQPRGKA---- 257
+++ L WD T V QL D+V+ AD L+ + SLV ++RL R
Sbjct: 185 PRVTVAQLDWDVAT-VHQLSAFQPDVVIAADVLYCPEAIMSLVGVLRRLAACREHQRAPE 243
Query: 258 --MVFAPRRGNTLNQFCNLAEKAGFCIQ---RHEN----YDEHI 292
+ F R T F +AG + RHE Y+EH+
Sbjct: 244 VYVAFTVRNPETCQLFTTELGRAGIRWEVEPRHEQKLFPYEEHL 287
>gi|42476337 hypothetical protein LOC196483 isoform 1 [Homo sapiens]
Length = 330
Score = 43.1 bits (100), Expect = 3e-04
Identities = 50/206 (24%), Positives = 86/206 (41%), Gaps = 23/206 (11%)
Query: 107 SGSLNVEDVLTSFDNTGNVCIWPSEEVLAYYCLKHNNIFRALAVCELGGGMTCLAGLMVA 166
S +L+ + S+ TG V W + LA + +++ +F V ELG G L GL +
Sbjct: 119 SVTLSESTAIISYGTTGLVT-WDAALYLAEWAIENPAVFTNRTVLELGSGAG-LTGLAIC 176
Query: 167 ISADVKEVLLTDGNEKAIRNVQDIITRNQKA------GVFKTQKISSCVLRWDNETDVSQ 220
+ + +D + + + ++ + N + + +++ L WD T V Q
Sbjct: 177 KMCRPRAYIFSDCHSRVLEQLRGNVLLNGLSLEADITAKLDSPRVTVAQLDWDVAT-VHQ 235
Query: 221 LEGHF-DIVMCADCLFLDQYRASLVDAIKRLLQPRGKA------MVFAPRRGNTLNQFCN 273
L D+V+ AD L+ + SLV ++RL R + F R T F
Sbjct: 236 LSAFQPDVVIAADVLYCPEAIMSLVGVLRRLAACREHQRAPEVYVAFTVRNPETCQLFTT 295
Query: 274 LAEKAGFCIQ---RHEN----YDEHI 292
+AG + RHE Y+EH+
Sbjct: 296 ELGRAGIRWEVEPRHEQKLFPYEEHL 321
>gi|239754822 PREDICTED: hypothetical protein LOC653333 [Homo
sapiens]
Length = 329
Score = 40.4 bits (93), Expect = 0.002
Identities = 46/197 (23%), Positives = 82/197 (41%), Gaps = 15/197 (7%)
Query: 116 LTSFDNTGNVCIWPSEEVLAYYCLKHNNIFRALAVCELGGGMTCLAGLMVAISADVKEVL 175
+ S TG V W + L + +++ F V ELG G L GL + + +
Sbjct: 128 IISHGTTGRVT-WDTALYLVEWAIENPAAFINRTVLELGSGAG-LTGLAICKMCRPRAYI 185
Query: 176 LTDGNEKAIRNVQDIITRNQ---KAGVF--KTQKISSCVLRWDNETDVSQLEG-HFDIVM 229
+D + + + +Q + N +A + + +++ L WD T V QL H D+V+
Sbjct: 186 FSDPHSRVLEQLQGNVLLNGLSLEADITGNXSPRVTVAQLDWDVAT-VHQLSAFHPDVVI 244
Query: 230 CADCLFLDQYRASLVDAIKRLLQPRGKA------MVFAPRRGNTLNQFCNLAEKAGFCIQ 283
AD L+ + SLV ++RL R + F R T F +AG +
Sbjct: 245 AADVLYCPEAIVSLVGVLQRLAACREHKRAPEVYVAFTVRNPETCQLFTTELGQAGIRWE 304
Query: 284 RHENYDEHISNFHSKLK 300
++D+ + + L+
Sbjct: 305 AEAHHDQKLFPYGEHLE 321
>gi|45827721 hypothetical protein LOC25895 isoform a [Homo sapiens]
Length = 226
Score = 40.0 bits (92), Expect = 0.003
Identities = 54/236 (22%), Positives = 98/236 (41%), Gaps = 22/236 (9%)
Query: 76 GKERETEEEVGAWVQYTSIFCPEYSISLRHNSGSLNVEDVLTSFDNTGN-----VCIWPS 130
G + E+E E + + +F YS S VLT N G+ +W +
Sbjct: 5 GPDPESESE-SVFPREVGLFADSYS----EKSQFCFCGHVLTITQNFGSRLGVAARVWDA 59
Query: 131 EEVLAYYCLKHNNIFRALAVCELGGGMTCLAGLMVAISADVKEVLLTDGNEKAIRNVQDI 190
L Y N FR V ELG G T + G++ A+ +V +TD A+ +Q
Sbjct: 60 ALSLCNYFESQNVDFRGKKVIELGAG-TGIVGILAALQGG--DVTITD-LPLALEQIQGN 115
Query: 191 ITRNQKAGVFKTQKISSCVLRWDNETDVSQLEGHFDIVMCADCLFLDQYRASLVDAIKRL 250
+ N AG + L W + V ++D+V+ AD ++L+ L+ ++ L
Sbjct: 116 VQANVPAG----GQAQVRALSWGIDHHV--FPANYDLVLGADIVYLEPTFPLLLGTLQHL 169
Query: 251 LQPRGKAMVFAPRR--GNTLNQFCNLAEKAGFCIQRHENYDEHISNFHSKLKKENP 304
+P G + + R T + F +L + + DE+++ + ++ ++ P
Sbjct: 170 CRPHGTIYLASKMRKEHGTESFFQHLLPQHFQLELAQRDEDENVNIYRARHREPRP 225
>gi|134133220 hypothetical protein LOC85002 [Homo sapiens]
Length = 296
Score = 38.5 bits (88), Expect = 0.008
Identities = 49/225 (21%), Positives = 88/225 (39%), Gaps = 16/225 (7%)
Query: 89 VQYTSIFCPEYSISLRHNSGSLNVEDVLTSFDNTGNVCIWPSEEVLAYYCLKHNNIFRAL 148
V+Y F E S +L+ + S TG V W + LA + +++ F
Sbjct: 67 VKYAWCFLSELIKKSSGGSVTLSKSTAIISHGTTGLVT-WDAALYLAEWAIENPAAFINR 125
Query: 149 AVCELGGGMTCLAGLMVAISADVKEVLLTDGNEKAIRNVQDIITRNQKA------GVFKT 202
V ELG G L GL + + + +D + + + ++ + N + G +
Sbjct: 126 TVLELGSGAG-LTGLAICKMCRPRAYIFSDPHSRVLEQLRGNVLLNGLSLEADITGNLDS 184
Query: 203 QKISSCVLRWDNETDVSQLEGHF-DIVMCADCLFLDQYRASLVDAIKRLLQPRGKA---- 257
+++ L WD V QL D+V+ AD L+ + SLV ++RL R
Sbjct: 185 PRVTVAQLDWDVAM-VHQLSAFQPDVVIAADVLYCPEAIVSLVGVLQRLAACREHKRAPE 243
Query: 258 --MVFAPRRGNTLNQFCNLAEKAGFCIQRHENYDEHISNFHSKLK 300
+ F R T F + G + ++D+ + + L+
Sbjct: 244 VYVAFTVRNPETCQLFTTELGRDGIRWEAEAHHDQKLFPYGEHLE 288
>gi|212549593 hypothetical protein LOC653333 [Homo sapiens]
Length = 330
Score = 35.8 bits (81), Expect = 0.053
Identities = 45/207 (21%), Positives = 83/207 (40%), Gaps = 16/207 (7%)
Query: 107 SGSLNVEDVLTSFDNTGNVCIWPSEEVLAYYCLKHNNIFRALAVCELGGGMTCLAGLMVA 166
S +L+ + S TG V W + LA + +++ F V ELG G L GL +
Sbjct: 119 SVTLSKSTAIISHGTTGLVT-WDAALYLAEWAIENPAAFINRTVLELGSGAG-LTGLAIC 176
Query: 167 ISADVKEVLLTDGNEKAIRNVQDIITRNQKA------GVFKTQKISSCVLRWDNETDVSQ 220
+ + +D + + + ++ + N + G + +++ L WD V Q
Sbjct: 177 KMCRPRAYIFSDPHSRILEQLRGNVLLNGLSLEADITGNLDSPRVTVAQLDWDVAM-VHQ 235
Query: 221 LEGHF-DIVMCADCLFLDQYRASLVDAIKRLLQPRGKA------MVFAPRRGNTLNQFCN 273
L D+V+ AD L+ + SLV ++RL R + F R T F
Sbjct: 236 LSAFQPDVVIAADVLYCPEAIVSLVGVLQRLAACREHKRAPEVYVAFTVRNPETCQLFTT 295
Query: 274 LAEKAGFCIQRHENYDEHISNFHSKLK 300
+ G + ++D+ + + L+
Sbjct: 296 ELGRDGIRWEAEAHHDQKLFPYGEHLE 322
>gi|94536786 hypothetical protein LOC79091 [Homo sapiens]
Length = 404
Score = 34.3 bits (77), Expect = 0.15
Identities = 44/191 (23%), Positives = 71/191 (37%), Gaps = 35/191 (18%)
Query: 127 IWPSEEVLAYYCLKHNNIFRALAVCELGGGMTCLAGLMVAISADVKEVLLTDGNEKAIRN 186
+W +LA Y L ++FR ELG G T LA ++ A A + V TD +
Sbjct: 186 VWRGALLLADYILFRQDLFRGCTALELGAG-TGLASIIAATMA--RTVYCTDVGADLLSM 242
Query: 187 VQDIITRNQK-----AGVFKTQKIS----------SCVLRWDNETDVSQLEGHFDIVMCA 231
Q I N G+ + +++ W E ++S L H I+ A
Sbjct: 243 CQRNIALNSHLAATGGGIVRVKELDWLKDDLCTDPKVPFSWSQE-EISDLYDHTTILFAA 301
Query: 232 DCLFLDQYRASLVDAIKRLLQPRGKAMVFAPRRGNTLNQFCNLAEKAGFCIQRH-----E 286
+ + D ++ + RL A R N ++ ++ F + RH E
Sbjct: 302 EVFYDDDLTDAVFKTLSRL----------AHRLKNACTAILSVEKRLNFTL-RHLDVTCE 350
Query: 287 NYDEHISNFHS 297
YD S H+
Sbjct: 351 AYDHFRSCLHA 361
>gi|188528686 hypothetical protein LOC151194 [Homo sapiens]
Length = 218
Score = 33.9 bits (76), Expect = 0.20
Identities = 35/180 (19%), Positives = 75/180 (41%), Gaps = 7/180 (3%)
Query: 127 IWPSEEVLAYYCLKHNNIFRALAVCELGGGMTCLAGLMVAISADVKEVLLTDGNEKAIRN 186
+W + VL+ Y R + ELG G T L G++ A+ V +TD + A+
Sbjct: 46 VWDAAIVLSTYLEMGAVELRGRSAVELGAG-TGLVGIVAALLG--AHVTITD-RKVALEF 101
Query: 187 VQDIITRNQKAGVFKTQKISSCVLRWDNETDVSQLEGHFDIVMCADCLFLDQYRASLVDA 246
++ + N + + L W S G FD+++ AD ++L++ L+
Sbjct: 102 LKSNVQANLPPHIQTKTVVKE--LTWGQNLG-SFSPGEFDLILGADIIYLEETFTDLLQT 158
Query: 247 IKRLLQPRGKAMVFAPRRGNTLNQFCNLAEKAGFCIQRHENYDEHISNFHSKLKKENPDI 306
++ L ++ R N F + E+ + H + ++ + + ++ + + D+
Sbjct: 159 LEHLCSNHSVILLACRIRYERDNNFLAMLERQFTVRKVHYDPEKDVHIYEAQKRNQKEDL 218
>gi|188528684 hypothetical protein LOC151194 [Homo sapiens]
Length = 218
Score = 33.9 bits (76), Expect = 0.20
Identities = 35/180 (19%), Positives = 75/180 (41%), Gaps = 7/180 (3%)
Query: 127 IWPSEEVLAYYCLKHNNIFRALAVCELGGGMTCLAGLMVAISADVKEVLLTDGNEKAIRN 186
+W + VL+ Y R + ELG G T L G++ A+ V +TD + A+
Sbjct: 46 VWDAAIVLSTYLEMGAVELRGRSAVELGAG-TGLVGIVAALLG--AHVTITD-RKVALEF 101
Query: 187 VQDIITRNQKAGVFKTQKISSCVLRWDNETDVSQLEGHFDIVMCADCLFLDQYRASLVDA 246
++ + N + + L W S G FD+++ AD ++L++ L+
Sbjct: 102 LKSNVQANLPPHIQTKTVVKE--LTWGQNLG-SFSPGEFDLILGADIIYLEETFTDLLQT 158
Query: 247 IKRLLQPRGKAMVFAPRRGNTLNQFCNLAEKAGFCIQRHENYDEHISNFHSKLKKENPDI 306
++ L ++ R N F + E+ + H + ++ + + ++ + + D+
Sbjct: 159 LEHLCSNHSVILLACRIRYERDNNFLAMLERQFTVRKVHYDPEKDVHIYEAQKRNQKEDL 218
>gi|4503617 exostoses-like 3 [Homo sapiens]
Length = 919
Score = 32.7 bits (73), Expect = 0.45
Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 10/105 (9%)
Query: 207 SCVLRWDNETDVSQLEGHFDIVMCADCLFLDQYRASLVDAIKRLLQPRGKAMVFAPRRGN 266
+C+LRW N ++ L +++ L Y +L +A GK +F PR GN
Sbjct: 18 TCMLRWSNRIRLTWLSFTLFVILVFFPLIAHYYLTTLDEA-----DEAGK-RIFGPRVGN 71
Query: 267 TLNQFCNLAEKAGFCIQRHENYDEHISNFHSKLKKENPDIYEENL 311
L C + C R E+ E + +K ++ N +I + NL
Sbjct: 72 EL---CEVKHVLDLCRIR-ESVSEELLQLEAKRQELNSEIAKLNL 112
>gi|126012513 hypothetical protein LOC124512 [Homo sapiens]
Length = 190
Score = 32.7 bits (73), Expect = 0.45
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 127 IWPSEEVLAYYCLKHNNIFRALAVCELGGGMTCLAGLMVAISADVKEVLLTDGNE 181
+WP VLA Y H A+ E+G G++ L G++ A EV+L+D +E
Sbjct: 3 VWPCAVVLAQYLWFHRRSLPGKAILEIGAGVS-LPGILAAKCG--AEVILSDSSE 54
>gi|118498343 ATPase, Ca++ transporting, type 2C, member 2 [Homo
sapiens]
Length = 946
Score = 30.4 bits (67), Expect = 2.2
Identities = 34/144 (23%), Positives = 60/144 (41%), Gaps = 26/144 (18%)
Query: 98 EYSISLRHNSGSLNVEDVLTSFDNTGNVCIWPSEEVLAYY------------CLKHNNIF 145
E +++ S L E +D G VC+ PS+EV+ + C+ +N +
Sbjct: 388 EMTVTQLVTSDGLRAEVSGVGYDGQGTVCLLPSKEVIKEFSNVSVGKLVEAGCVANNAVI 447
Query: 146 RALAVCELGGGMTCLAGLMVAISADVKEVLLTDGNEKAIRNVQDIITRNQKAGVFKTQKI 205
R AV G T A + +A+ D L+D IR + + QK K
Sbjct: 448 RKNAVM---GQPTEGALMALAMKMD-----LSDIKNSYIRKKEIPFSSEQKWMAVK---- 495
Query: 206 SSCVLRWDNETDVSQLEGHFDIVM 229
C L+ +++ D+ ++G + V+
Sbjct: 496 --CSLKTEDQEDIYFMKGALEEVI 517
>gi|209529731 hypothetical protein LOC254013 [Homo sapiens]
Length = 262
Score = 28.9 bits (63), Expect = 6.5
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 128 WPSEEVLAYYCLKHNNIFRALAVCELGGGMTCLAGLMVAISADVKEVLLTD 178
WP + L+ Y L + ++ R +V +LG G C A + A + +L D
Sbjct: 97 WPGGQALSRYLLDNPDVVRGKSVLDLGSG--CGATAIAAKMSGASRILAND 145
>gi|209529729 hypothetical protein LOC254013 [Homo sapiens]
Length = 262
Score = 28.9 bits (63), Expect = 6.5
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 128 WPSEEVLAYYCLKHNNIFRALAVCELGGGMTCLAGLMVAISADVKEVLLTD 178
WP + L+ Y L + ++ R +V +LG G C A + A + +L D
Sbjct: 97 WPGGQALSRYLLDNPDVVRGKSVLDLGSG--CGATAIAAKMSGASRILAND 145
>gi|28603834 hypothetical protein LOC254013 [Homo sapiens]
Length = 262
Score = 28.9 bits (63), Expect = 6.5
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
Query: 128 WPSEEVLAYYCLKHNNIFRALAVCELGGGMTCLAGLMVAISADVKEVLLTD 178
WP + L+ Y L + ++ R +V +LG G C A + A + +L D
Sbjct: 97 WPGGQALSRYLLDNPDVVRGKSVLDLGSG--CGATAIAAKMSGASRILAND 145
>gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens]
Length = 1684
Score = 28.5 bits (62), Expect = 8.4
Identities = 34/147 (23%), Positives = 67/147 (45%), Gaps = 13/147 (8%)
Query: 170 DVKEVLLTDGNEKAIRNVQDI--ITRNQKAGVFKTQ-KISSCVLRWDNETD-VSQLEGHF 225
++ E+L T+ E A + Q+ + + Q + V + Q K+ + D + V++L+G
Sbjct: 485 EIMEILQTELGESAGKISQEFESMKQQQASDVHELQQKLRTAFTEKDALLETVNRLQGEN 544
Query: 226 DIVMCADCLFLDQYRASLVDAIKRLLQPRGKAMVFAPRRGNTLNQF----CNLAEKAGFC 281
+ ++ L + L + IK L + G ++ +R L + +L E+
Sbjct: 545 EKLLSQQELVPE-----LENTIKNLQEKNGVYLLSLSQRDTMLKELEGKINSLTEEKDDF 599
Query: 282 IQRHENYDEHISNFHSKLKKENPDIYE 308
I + +N E + NFH K ++E I E
Sbjct: 600 INKLKNSHEEMDNFHKKCEREERLILE 626
>gi|81295809 pericentrin [Homo sapiens]
Length = 3336
Score = 28.5 bits (62), Expect = 8.4
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Query: 9 GTGETARAAGGSPAVGCTTRGPVVSAPLGAARWKLLRQVLKQKHLDDCLRHV----SVRR 64
G+G AR + GS T GPV A + + R++ L + +K+K + +HV + R
Sbjct: 2344 GSGFGARLSPGSGGPEAQTAGPVTPASI-SGRFQPLPEAMKEKEVRP--KHVKALLQMVR 2400
Query: 65 FESFNLFSVTEG 76
ES + +++EG
Sbjct: 2401 DESHQILALSEG 2412
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.135 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,210,038
Number of Sequences: 37866
Number of extensions: 521068
Number of successful extensions: 1460
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 1454
Number of HSP's gapped (non-prelim): 18
length of query: 323
length of database: 18,247,518
effective HSP length: 102
effective length of query: 221
effective length of database: 14,385,186
effective search space: 3179126106
effective search space used: 3179126106
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.