BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|13376097 NIPA-like domain containing 2 [Homo sapiens] (368 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|13376097 NIPA-like domain containing 2 [Homo sapiens] 729 0.0 gi|10092687 NIPA-like domain containing 3 [Homo sapiens] 310 2e-84 gi|46409302 NIPA-like domain containing 1 [Homo sapiens] 154 2e-37 gi|149944536 ichthyin protein [Homo sapiens] 150 2e-36 gi|57013272 non imprinted in Prader-Willi/Angelman syndrome 2 is... 149 3e-36 gi|57164953 non imprinted in Prader-Willi/Angelman syndrome 2 is... 149 3e-36 gi|57013274 non imprinted in Prader-Willi/Angelman syndrome 2 is... 149 3e-36 gi|57164951 non imprinted in Prader-Willi/Angelman syndrome 2 is... 130 2e-30 gi|41406091 non-imprinted in Prader-Willi/Angelman syndrome 1 is... 102 4e-22 gi|214010179 non-imprinted in Prader-Willi/Angelman syndrome 1 i... 86 7e-17 gi|109689695 transient receptor potential cation channel, subfam... 32 0.91 gi|31881630 prostaglandin E receptor 2 (subtype EP2), 53kDa [Hom... 32 1.2 gi|84370252 MARVEL domain containing 2 isoform 1 [Homo sapiens] 31 1.5 gi|21687270 MARVEL domain containing 2 isoform beta [Homo sapiens] 31 1.5 gi|7706529 CD244 natural killer cell receptor 2B4 [Homo sapiens] 31 2.0 gi|13376856 solute carrier family 19, member 3 [Homo sapiens] 31 2.0 gi|4557461 nicotinic acetylcholine receptor delta polypeptide pr... 30 2.6 gi|82659109 retinoblastoma-associated factor 600 [Homo sapiens] 30 2.6 gi|211063479 major facilitator superfamily domain containing 2 i... 30 3.4 gi|42713696 major facilitator superfamily domain containing 2 is... 30 3.4 gi|170650643 solute carrier family 22, member 23 isoform a [Homo... 30 4.5 gi|119220552 sidekick 1 [Homo sapiens] 29 5.9 gi|224465231 solute carrier family 9, member 11 [Homo sapiens] 29 5.9 >gi|13376097 NIPA-like domain containing 2 [Homo sapiens] Length = 368 Score = 729 bits (1882), Expect = 0.0 Identities = 368/368 (100%), Positives = 368/368 (100%) Query: 1 MAAVAPAGPGDSASAALDELSLNFTYGAPGAGNGSLSGDWYRRNQIHLFGVLLAILGNLV 60 MAAVAPAGPGDSASAALDELSLNFTYGAPGAGNGSLSGDWYRRNQIHLFGVLLAILGNLV Sbjct: 1 MAAVAPAGPGDSASAALDELSLNFTYGAPGAGNGSLSGDWYRRNQIHLFGVLLAILGNLV 60 Query: 61 ISISLNIQKYSHLQLAQQEHPRPYFKSVLWWGGVLLMAVGETGNFAAYGFAPITLIAPLG 120 ISISLNIQKYSHLQLAQQEHPRPYFKSVLWWGGVLLMAVGETGNFAAYGFAPITLIAPLG Sbjct: 61 ISISLNIQKYSHLQLAQQEHPRPYFKSVLWWGGVLLMAVGETGNFAAYGFAPITLIAPLG 120 Query: 121 CVSVTGSAIISVTFLKDNLRASDLLGTTLAFAGTYLLVNFAPNITQAISARTVQYYLVGW 180 CVSVTGSAIISVTFLKDNLRASDLLGTTLAFAGTYLLVNFAPNITQAISARTVQYYLVGW Sbjct: 121 CVSVTGSAIISVTFLKDNLRASDLLGTTLAFAGTYLLVNFAPNITQAISARTVQYYLVGW 180 Query: 181 QFLIYVILEILIFCILLYFYKRKGMKHMVILLTLVAILASLTVISVKAVSGMITFSVMDK 240 QFLIYVILEILIFCILLYFYKRKGMKHMVILLTLVAILASLTVISVKAVSGMITFSVMDK Sbjct: 181 QFLIYVILEILIFCILLYFYKRKGMKHMVILLTLVAILASLTVISVKAVSGMITFSVMDK 240 Query: 241 MQLTYPIFYIMFIIMIASCVFQVKFLNQATKLYNTTTVVPVNHIFFTISAIIAGIIFYQE 300 MQLTYPIFYIMFIIMIASCVFQVKFLNQATKLYNTTTVVPVNHIFFTISAIIAGIIFYQE Sbjct: 241 MQLTYPIFYIMFIIMIASCVFQVKFLNQATKLYNTTTVVPVNHIFFTISAIIAGIIFYQE 300 Query: 301 FLGAPFLTVFIYLFGCFLSFLGVFLVTRNREKEHLQQSYIDFGNIPDTTPERKAWRETNV 360 FLGAPFLTVFIYLFGCFLSFLGVFLVTRNREKEHLQQSYIDFGNIPDTTPERKAWRETNV Sbjct: 301 FLGAPFLTVFIYLFGCFLSFLGVFLVTRNREKEHLQQSYIDFGNIPDTTPERKAWRETNV 360 Query: 361 GQNTTRFT 368 GQNTTRFT Sbjct: 361 GQNTTRFT 368 >gi|10092687 NIPA-like domain containing 3 [Homo sapiens] Length = 406 Score = 310 bits (793), Expect = 2e-84 Identities = 158/343 (46%), Positives = 225/343 (65%), Gaps = 14/343 (4%) Query: 12 SASAALDELSLNFTYGAPGAGNGSLSGDWYRRNQIHLFGVLLAILGNLVISISLNIQKYS 71 S SAAL L T + S S Y+ N L G LLAI G+LV+SI+LN+QKY Sbjct: 4 SHSAALKLQQLPPTSSSSAVSEASFS---YKEN---LIGALLAIFGHLVVSIALNLQKYC 57 Query: 72 HLQLAQQEHPRPYFKSVLWWGGVLLMAVGETGNFAAYGFAPITLIAPLGCVSVTGSAIIS 131 H++LA + PR YFK+ WW G+ LM +GE G FA+Y FAP++LI PL VSV SAII Sbjct: 58 HIRLAGSKDPRAYFKTKTWWLGLFLMLLGELGVFASYAFAPLSLIVPLSAVSVIASAIIG 117 Query: 132 VTFLKDNLRASDLL--------GTTLAFAGTYLLVNFAPNITQAISARTVQYYLVGWQFL 183 + F+K+ + D L G LA GTYLLV FAPN + ++ V +LV W FL Sbjct: 118 IIFIKEKWKPKDFLRRYVLSFVGCGLAVVGTYLLVTFAPNSHEKMTGENVTRHLVSWPFL 177 Query: 184 IYVILEILIFCILLYFYKRKGMKHMVILLTLVAILASLTVISVKAVSGMITFSVMDKMQL 243 +Y+++EI++FC+LLYFYK K ++V++L LVA+L S+TV++VKAV+GM+ S+ +QL Sbjct: 178 LYMLVEIILFCLLLYFYKEKNANNIVVILLLVALLGSMTVVTVKAVAGMLVLSIQGNLQL 237 Query: 244 TYPIFYIMFIIMIASCVFQVKFLNQATKLYNTTTVVPVNHIFFTISAIIAGIIFYQEFLG 303 YPIFY+MF+ M+A+ V+Q FL+QA+++Y+++ + V +I T AI AG IFY +F+G Sbjct: 238 DYPIFYVMFVCMVATAVYQAAFLSQASQMYDSSLIASVGYILSTTIAITAGAIFYLDFIG 297 Query: 304 APFLTVFIYLFGCFLSFLGVFLVTRNREKEHLQQSYIDFGNIP 346 L + ++ GC ++FLGVFL+TRNR+K + YI +P Sbjct: 298 EDVLHICMFALGCLIAFLGVFLITRNRKKPIPFEPYISMDAMP 340 >gi|46409302 NIPA-like domain containing 1 [Homo sapiens] Length = 410 Score = 154 bits (388), Expect = 2e-37 Identities = 89/301 (29%), Positives = 162/301 (53%), Gaps = 8/301 (2%) Query: 33 NGSLSGDWYRRNQIHLFGVLLAILGNLVISISLNIQKYSHLQLAQQEHPRP------YFK 86 N S+S + + +++ G++LA+ ++ I S ++K LQLA + R Y K Sbjct: 55 NLSISANVENKYSLYV-GLVLAVSSSIFIGSSFILKKKGLLQLASKGFTRAGQGGHSYLK 113 Query: 87 SVLWWGGVLLMAVGETGNFAAYGFAPITLIAPLGCVSVTGSAIISVTFLKDNLRASDLLG 146 LWW G+L M GE NFAAY FAP TL+ PLG +SV SAI+S FL ++L +G Sbjct: 114 EWLWWVGLLSMGAGEAANFAAYAFAPATLVTPLGALSVLISAILSSYFLNEHLNIHGKIG 173 Query: 147 TTLAFAGTYLLVNFAPNITQAISARTVQYYLVGWQFLIY-VILEILIFCILLYFYKRKGM 205 L+ G+ ++V AP + S ++ L F+ + VI+ ++ ++L +KG Sbjct: 174 CILSILGSTVMVIHAPQEEEVTSLHEMEMKLRDPGFISFAVIITVISLVLILIVAPKKGQ 233 Query: 206 KHMVILLTLVAILASLTVISVKAVSGMITFSVMDKMQLTYPIFYIMFIIMIASCVFQVKF 265 ++++ +++ +++ + +V SVK + I + K +P+ +++ +++ S Q+ + Sbjct: 234 TNILVYISICSLIGAFSVSSVKGLGIAIKELIEWKPVYKHPLVFVLLAVLVLSVTTQINY 293 Query: 266 LNQATKLYNTTTVVPVNHIFFTISAIIAGIIFYQEFLGAPFLTVFIYLFGCFLSFLGVFL 325 LN+A +NT+ V P+ ++FFT + I +QE+ G + L G F +G+FL Sbjct: 294 LNKALDTFNTSLVTPIYYVFFTSMVVTCSAILFQEWYGMTAGDIIGTLSGFFTIIIGIFL 353 Query: 326 V 326 + Sbjct: 354 L 354 >gi|149944536 ichthyin protein [Homo sapiens] Length = 466 Score = 150 bits (378), Expect = 2e-36 Identities = 89/293 (30%), Positives = 156/293 (53%), Gaps = 9/293 (3%) Query: 42 RRNQIHLFGVLLAILGNLVISISLNIQKYSHLQLAQQEHPRP------YFKSVLWWGGVL 95 R+N G+ LA L + +I S+ ++K L+L R Y K +WW G L Sbjct: 113 RQNYGFYIGLGLAFLSSFLIGSSVILKKKGLLRLVATGATRAVDGGFGYLKDAMWWAGFL 172 Query: 96 LMAVGETGNFAAYGFAPITLIAPLGCVSVTGSAIISVTFLKDNLRASDLLGTTLAFAGTY 155 MA GE NF AY FAP T++ PLG +SV SAI+S FL+++L LG + AG+ Sbjct: 173 TMAAGEVANFGAYAFAPATVVTPLGALSVLISAILSSYFLRESLNLLGKLGCVICVAGST 232 Query: 156 LLVNFAPNITQAISARTVQYYLVGWQFLIYVILEILIFCILLYFY--KRKGMKHMVILLT 213 ++V AP + + + + F+++ +L +L+ C++L F R G ++++I + Sbjct: 233 VMVIHAPEEEKVTTIMEMASKMKDTGFIVFAVL-LLVSCLILIFVIAPRYGQRNILIYII 291 Query: 214 LVAILASLTVISVKAVSGMITFSVMDKMQLTYPIFYIMFIIMIASCVFQVKFLNQATKLY 273 + +++ + +V +VK + I + +P+ YI+ +I+ S QV FLN+A ++ Sbjct: 292 ICSVIGAFSVAAVKGLGITIKNFFQGLPVVRHPLPYILSLILALSLSTQVNFLNRALDIF 351 Query: 274 NTTTVVPVNHIFFTISAIIAGIIFYQEFLGAPFLTVFIYLFGCFLSFLGVFLV 326 NT+ V P+ ++FFT + + II ++E+ + + L G LGVF++ Sbjct: 352 NTSLVFPIYYVFFTTVVVTSSIILFKEWYSMSAVDIAGTLSGFVTIILGVFML 404 >gi|57013272 non imprinted in Prader-Willi/Angelman syndrome 2 isoform a [Homo sapiens] Length = 360 Score = 149 bits (377), Expect = 3e-36 Identities = 87/284 (30%), Positives = 152/284 (53%), Gaps = 7/284 (2%) Query: 50 GVLLAILGNLVISISLNIQKYSHLQLAQQEHPRP------YFKSVLWWGGVLLMAVGETG 103 G+ LA+ ++ I S ++K L+LA++ R Y K LWW G+L M GE Sbjct: 13 GLGLAMSSSIFIGGSFILKKKGLLRLARKGSMRAGQGGHAYLKEWLWWAGLLSMGAGEVA 72 Query: 104 NFAAYGFAPITLIAPLGCVSVTGSAIISVTFLKDNLRASDLLGTTLAFAGTYLLVNFAPN 163 NFAAY FAP TL+ PLG +SV SAI+S FL + L +G L+ G+ ++V AP Sbjct: 73 NFAAYAFAPATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSILGSTVMVIHAPK 132 Query: 164 ITQAISARTVQYYLVGWQFLIYVILEILIFCILLYFY-KRKGMKHMVILLTLVAILASLT 222 + + + + L F+++ L +++ IL++ R G ++++ +T+ +++ + + Sbjct: 133 EEEIETLNEMSHKLGDPGFVVFATLVVIVALILIFVVGPRHGQTNILVYITICSVIGAFS 192 Query: 223 VISVKAVSGMITFSVMDKMQLTYPIFYIMFIIMIASCVFQVKFLNQATKLYNTTTVVPVN 282 V VK + I K L +P+ +I+ + +I Q+ +LN+A ++NT+ V P+ Sbjct: 193 VSCVKGLGIAIKELFAGKPVLRHPLAWILLLSLIVCVSTQINYLNRALDIFNTSIVTPIY 252 Query: 283 HIFFTISAIIAGIIFYQEFLGAPFLTVFIYLFGCFLSFLGVFLV 326 ++FFT S + I ++E+ P V L G F +G+FL+ Sbjct: 253 YVFFTTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLL 296 >gi|57164953 non imprinted in Prader-Willi/Angelman syndrome 2 isoform a [Homo sapiens] Length = 360 Score = 149 bits (377), Expect = 3e-36 Identities = 87/284 (30%), Positives = 152/284 (53%), Gaps = 7/284 (2%) Query: 50 GVLLAILGNLVISISLNIQKYSHLQLAQQEHPRP------YFKSVLWWGGVLLMAVGETG 103 G+ LA+ ++ I S ++K L+LA++ R Y K LWW G+L M GE Sbjct: 13 GLGLAMSSSIFIGGSFILKKKGLLRLARKGSMRAGQGGHAYLKEWLWWAGLLSMGAGEVA 72 Query: 104 NFAAYGFAPITLIAPLGCVSVTGSAIISVTFLKDNLRASDLLGTTLAFAGTYLLVNFAPN 163 NFAAY FAP TL+ PLG +SV SAI+S FL + L +G L+ G+ ++V AP Sbjct: 73 NFAAYAFAPATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSILGSTVMVIHAPK 132 Query: 164 ITQAISARTVQYYLVGWQFLIYVILEILIFCILLYFY-KRKGMKHMVILLTLVAILASLT 222 + + + + L F+++ L +++ IL++ R G ++++ +T+ +++ + + Sbjct: 133 EEEIETLNEMSHKLGDPGFVVFATLVVIVALILIFVVGPRHGQTNILVYITICSVIGAFS 192 Query: 223 VISVKAVSGMITFSVMDKMQLTYPIFYIMFIIMIASCVFQVKFLNQATKLYNTTTVVPVN 282 V VK + I K L +P+ +I+ + +I Q+ +LN+A ++NT+ V P+ Sbjct: 193 VSCVKGLGIAIKELFAGKPVLRHPLAWILLLSLIVCVSTQINYLNRALDIFNTSIVTPIY 252 Query: 283 HIFFTISAIIAGIIFYQEFLGAPFLTVFIYLFGCFLSFLGVFLV 326 ++FFT S + I ++E+ P V L G F +G+FL+ Sbjct: 253 YVFFTTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLL 296 >gi|57013274 non imprinted in Prader-Willi/Angelman syndrome 2 isoform a [Homo sapiens] Length = 360 Score = 149 bits (377), Expect = 3e-36 Identities = 87/284 (30%), Positives = 152/284 (53%), Gaps = 7/284 (2%) Query: 50 GVLLAILGNLVISISLNIQKYSHLQLAQQEHPRP------YFKSVLWWGGVLLMAVGETG 103 G+ LA+ ++ I S ++K L+LA++ R Y K LWW G+L M GE Sbjct: 13 GLGLAMSSSIFIGGSFILKKKGLLRLARKGSMRAGQGGHAYLKEWLWWAGLLSMGAGEVA 72 Query: 104 NFAAYGFAPITLIAPLGCVSVTGSAIISVTFLKDNLRASDLLGTTLAFAGTYLLVNFAPN 163 NFAAY FAP TL+ PLG +SV SAI+S FL + L +G L+ G+ ++V AP Sbjct: 73 NFAAYAFAPATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSILGSTVMVIHAPK 132 Query: 164 ITQAISARTVQYYLVGWQFLIYVILEILIFCILLYFY-KRKGMKHMVILLTLVAILASLT 222 + + + + L F+++ L +++ IL++ R G ++++ +T+ +++ + + Sbjct: 133 EEEIETLNEMSHKLGDPGFVVFATLVVIVALILIFVVGPRHGQTNILVYITICSVIGAFS 192 Query: 223 VISVKAVSGMITFSVMDKMQLTYPIFYIMFIIMIASCVFQVKFLNQATKLYNTTTVVPVN 282 V VK + I K L +P+ +I+ + +I Q+ +LN+A ++NT+ V P+ Sbjct: 193 VSCVKGLGIAIKELFAGKPVLRHPLAWILLLSLIVCVSTQINYLNRALDIFNTSIVTPIY 252 Query: 283 HIFFTISAIIAGIIFYQEFLGAPFLTVFIYLFGCFLSFLGVFLV 326 ++FFT S + I ++E+ P V L G F +G+FL+ Sbjct: 253 YVFFTTSVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLL 296 >gi|57164951 non imprinted in Prader-Willi/Angelman syndrome 2 isoform b [Homo sapiens] Length = 341 Score = 130 bits (327), Expect = 2e-30 Identities = 79/278 (28%), Positives = 145/278 (52%), Gaps = 14/278 (5%) Query: 50 GVLLAILGNLVISISLNIQKYSHLQLAQQEHPRPYFKSVLWWGGVLLMAVGETGNFAAYG 109 G+ LA+ ++ I S ++K L+LA++ G + + GE NFAAY Sbjct: 13 GLGLAMSSSIFIGGSFILKKKGLLRLARK-------------GSMRAVGAGEVANFAAYA 59 Query: 110 FAPITLIAPLGCVSVTGSAIISVTFLKDNLRASDLLGTTLAFAGTYLLVNFAPNITQAIS 169 FAP TL+ PLG +SV SAI+S FL + L +G L+ G+ ++V AP + + Sbjct: 60 FAPATLVTPLGALSVLVSAILSSYFLNERLNLHGKIGCLLSILGSTVMVIHAPKEEEIET 119 Query: 170 ARTVQYYLVGWQFLIYVILEILIFCILLYFY-KRKGMKHMVILLTLVAILASLTVISVKA 228 + + L F+++ L +++ IL++ R G ++++ +T+ +++ + +V VK Sbjct: 120 LNEMSHKLGDPGFVVFATLVVIVALILIFVVGPRHGQTNILVYITICSVIGAFSVSCVKG 179 Query: 229 VSGMITFSVMDKMQLTYPIFYIMFIIMIASCVFQVKFLNQATKLYNTTTVVPVNHIFFTI 288 + I K L +P+ +I+ + +I Q+ +LN+A ++NT+ V P+ ++FFT Sbjct: 180 LGIAIKELFAGKPVLRHPLAWILLLSLIVCVSTQINYLNRALDIFNTSIVTPIYYVFFTT 239 Query: 289 SAIIAGIIFYQEFLGAPFLTVFIYLFGCFLSFLGVFLV 326 S + I ++E+ P V L G F +G+FL+ Sbjct: 240 SVLTCSAILFKEWQDMPVDDVIGTLSGFFTIIVGIFLL 277 >gi|41406091 non-imprinted in Prader-Willi/Angelman syndrome 1 isoform 1 [Homo sapiens] Length = 329 Score = 102 bits (255), Expect = 4e-22 Identities = 59/256 (23%), Positives = 133/256 (51%), Gaps = 7/256 (2%) Query: 50 GVLLAILGNLVISISLNIQKYSHLQLAQQEHPRPYFKSVLWWGGVLLMAVGETGNFAAYG 109 G+ +A++ +LV + +QK ++ ++ Y ++WW G + MAVG+ GNF AY Sbjct: 31 GLGVAVVSSLVNGSTFVLQKKGIVRAKRRG--TSYLTDIVWWAGTIAMAVGQIGNFLAYT 88 Query: 110 FAPITLIAPLGCVSVTGSAIISVTFLKDNLRASDLLGTTLAFAGTYLLVNFAPNITQAIS 169 P L+ PLG + V +I++ LK+ L LG L+ AG+ +L+ +P + Sbjct: 89 AVPTVLVTPLGALGVPFGSILASYLLKEKLNILGKLGCLLSCAGSVVLIIHSPKSESVTT 148 Query: 170 ARTVQYYLVGWQFLIYVILEILIFCILLYFY-KRKGMKHMVILLTLVAILASLTVISVKA 228 ++ L F+ Y+ + +L+ +L+++ G ++++ +++ ++L S TV S K Sbjct: 149 QAELEEKLTNPVFVGYLCIVLLMLLLLIFWIAPAHGPTNIMVYISICSLLGSFTVPSTKG 208 Query: 229 VSGMITFSVM---DKMQLTYPIFYIMFIIMIASCVFQVKFLNQATKLYNTTTVVPVNHIF 285 + G+ ++ Q + ++ ++ S + Q +++N+A + ++++ + ++ Sbjct: 209 I-GLAAQDILHNNPSSQRALCLCLVLLAVLGCSIIVQFRYINKALECFDSSVFGAIYYVV 267 Query: 286 FTISAIIAGIIFYQEF 301 FT ++A I ++E+ Sbjct: 268 FTTLVLLASAILFREW 283 >gi|214010179 non-imprinted in Prader-Willi/Angelman syndrome 1 isoform 2 [Homo sapiens] Length = 254 Score = 85.5 bits (210), Expect = 7e-17 Identities = 49/209 (23%), Positives = 109/209 (52%), Gaps = 5/209 (2%) Query: 97 MAVGETGNFAAYGFAPITLIAPLGCVSVTGSAIISVTFLKDNLRASDLLGTTLAFAGTYL 156 MAVG+ GNF AY P L+ PLG + V +I++ LK+ L LG L+ AG+ + Sbjct: 1 MAVGQIGNFLAYTAVPTVLVTPLGALGVPFGSILASYLLKEKLNILGKLGCLLSCAGSVV 60 Query: 157 LVNFAPNITQAISARTVQYYLVGWQFLIYVILEILIFCILLYFY-KRKGMKHMVILLTLV 215 L+ +P + ++ L F+ Y+ + +L+ +L+++ G ++++ +++ Sbjct: 61 LIIHSPKSESVTTQAELEEKLTNPVFVGYLCIVLLMLLLLIFWIAPAHGPTNIMVYISIC 120 Query: 216 AILASLTVISVKAVSGMITFSVM---DKMQLTYPIFYIMFIIMIASCVFQVKFLNQATKL 272 ++L S TV S K + G+ ++ Q + ++ ++ S + Q +++N+A + Sbjct: 121 SLLGSFTVPSTKGI-GLAAQDILHNNPSSQRALCLCLVLLAVLGCSIIVQFRYINKALEC 179 Query: 273 YNTTTVVPVNHIFFTISAIIAGIIFYQEF 301 ++++ + ++ FT ++A I ++E+ Sbjct: 180 FDSSVFGAIYYVVFTTLVLLASAILFREW 208 >gi|109689695 transient receptor potential cation channel, subfamily M, member 8 [Homo sapiens] Length = 1104 Score = 32.0 bits (71), Expect = 0.91 Identities = 37/161 (22%), Positives = 70/161 (43%), Gaps = 18/161 (11%) Query: 172 TVQYYLVGWQFLIYVILEILIFCILLYFYKRKGMKHMVILLTLVAILASLTVISVKAVSG 231 T + + W + Y+ +L +LL + ++L +LV +L + V+G Sbjct: 732 TSPFVVFSWNVVFYIAFLLLFAYVLLMDFHSVPHPPELVLYSLVFVL-FCDEVRQWYVNG 790 Query: 232 MITFSVMDKMQLTYPIFYIMFIIMIASCVFQVKFLNQATKLYNTTTVVPVNHIFFTISAI 291 + F+ + + T +FY IA VF++ N+++ LY+ + +++I FT+ I Sbjct: 791 VNYFTDLWNVMDTLGLFY-----FIAGIVFRLHSSNKSS-LYSGRVIFCLDYIIFTLRLI 844 Query: 292 I---------AGIIFYQEFLGAPFLTVFIYLFGCFLSFLGV 323 II Q L F F++LF ++ GV Sbjct: 845 HIFTVSRNLGPKIIMLQRMLIDVFF--FLFLFAVWMVAFGV 883 >gi|31881630 prostaglandin E receptor 2 (subtype EP2), 53kDa [Homo sapiens] Length = 358 Score = 31.6 bits (70), Expect = 1.2 Identities = 46/205 (22%), Positives = 82/205 (40%), Gaps = 35/205 (17%) Query: 83 PYFKSVLWWGGVLLMAVGETGNFAAYGFAPITLIAPLGCVSVTGSAIISVTFLKDNLRAS 142 P SV++ GVL GN A +GC + S++ L L + Sbjct: 25 PAISSVMFSAGVL-------GNLIALALLARRWRGDVGCSAGRRSSLSLFHVLVTELVFT 77 Query: 143 DLLGTTLAFAGTYLLVNFAPN---ITQAISARTVQYYLVGWQFLIYVILEILIFCILL-- 197 DLLGT L +L ++A N + A +R Y+ F + +++F + L Sbjct: 78 DLLGTCL--ISPVVLASYARNQTLVALAPESRACTYFAFAMTFFSLATM-LMLFAMALER 134 Query: 198 -------YFYKRK-----GMKHMVILLTLVAILASLTVIS----VKAVSGMITFSVMDK- 240 YFY+R+ G+ + ++ + + SL ++ V+ G F + Sbjct: 135 YLSIGHPYFYQRRVSRSGGLAVLPVIYAVSLLFCSLPLLDYGQYVQYCPGTWCFIRHGRT 194 Query: 241 --MQLTYPIFYIMFIIMIASCVFQV 263 +QL Y ++ I+ + +C F V Sbjct: 195 AYLQL-YATLLLLLIVSVLACNFSV 218 >gi|84370252 MARVEL domain containing 2 isoform 1 [Homo sapiens] Length = 558 Score = 31.2 bits (69), Expect = 1.5 Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 11/104 (10%) Query: 251 MFIIMIASCVFQVKFLNQATKLYNTTTVVPVNHIFFTI-SAIIAGIIFYQEFLGAPFLTV 309 +FI+ +A+ + V N+ Y PVN +F + IA +IF F+T+ Sbjct: 300 LFILYMAAAIVYVNDTNRGGLCYYPLFNTPVNAVFCRVEGGQIAAMIFL-------FVTM 352 Query: 310 FIYLFGCFLSFLGVFLVTRNREKEHLQQSYIDFGNIPDTTPERK 353 +YL + R +E+++Q I N P + +RK Sbjct: 353 IVYLISALVCLKLWRHEAARRHREYMEQQEI---NEPSLSSKRK 393 >gi|21687270 MARVEL domain containing 2 isoform beta [Homo sapiens] Length = 457 Score = 31.2 bits (69), Expect = 1.5 Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 11/104 (10%) Query: 251 MFIIMIASCVFQVKFLNQATKLYNTTTVVPVNHIFFTI-SAIIAGIIFYQEFLGAPFLTV 309 +FI+ +A+ + V N+ Y PVN +F + IA +IF F+T+ Sbjct: 300 LFILYMAAAIVYVNDTNRGGLCYYPLFNTPVNAVFCRVEGGQIAAMIFL-------FVTM 352 Query: 310 FIYLFGCFLSFLGVFLVTRNREKEHLQQSYIDFGNIPDTTPERK 353 +YL + R +E+++Q I N P + +RK Sbjct: 353 IVYLISALVCLKLWRHEAARRHREYMEQQEI---NEPSLSSKRK 393 >gi|7706529 CD244 natural killer cell receptor 2B4 [Homo sapiens] Length = 365 Score = 30.8 bits (68), Expect = 2.0 Identities = 15/36 (41%), Positives = 19/36 (52%) Query: 298 YQEFLGAPFLTVFIYLFGCFLSFLGVFLVTRNREKE 333 +QEF PFL + + L FL L F V R + KE Sbjct: 217 HQEFRFWPFLVIIVILSALFLGTLACFCVWRRKRKE 252 >gi|13376856 solute carrier family 19, member 3 [Homo sapiens] Length = 496 Score = 30.8 bits (68), Expect = 2.0 Identities = 41/198 (20%), Positives = 77/198 (38%), Gaps = 30/198 (15%) Query: 156 LLVNFAPNITQAISARTVQYYLVGWQFLIYVILEILIFCILLYFYKRKGMKHMV------ 209 + V + ++ + S++ + Y+ + W F ++L + +L+ YK + Sbjct: 261 VFVQWFQDLKECYSSKRLFYWSLWWAFATAGFNQVLNYVQILWDYKAPSQDSSIYNGAVE 320 Query: 210 ILLTLVAILASLTVISVK------AVSGMITFSVMDKMQL--------------TYPIFY 249 + T +A+ V VK ++ FSV++ L Y IF Sbjct: 321 AIATFGGAVAAFAVGYVKVNWDLLGELALVVFSVVNAGSLFLMHYTANIWACYAGYLIFK 380 Query: 250 IMFIIMIASCVFQVKFLNQATKLYNTTTVVPVN-HIFFTISAIIAGIIFYQEFLGAPFLT 308 ++++I VFQ+ +N + Y V +N I I I+ I+ Q L P Sbjct: 381 SSYMLLITIAVFQIA-VNLNVERY--ALVFGINTFIALVIQTIMTVIVVDQRGLNLPVSI 437 Query: 309 VFIYLFGCFLSFLGVFLV 326 F+ F G+FL+ Sbjct: 438 QFLVYGSYFAVIAGIFLM 455 >gi|4557461 nicotinic acetylcholine receptor delta polypeptide precursor [Homo sapiens] Length = 517 Score = 30.4 bits (67), Expect = 2.6 Identities = 23/110 (20%), Positives = 50/110 (45%), Gaps = 9/110 (8%) Query: 169 SARTVQYYLVGWQFLIYVILEILIFCILL--------YFYKRKGMKHMVILLTLVAILAS 220 S + + +YL+ + ++ I+ IL+ C+L+ Y G K V + L+A Sbjct: 232 SRQDITFYLIIRRKPLFYIINILVPCVLISFMVNLVFYLPADSGEKTSVAISVLLAQSVF 291 Query: 221 LTVISVKAVSGMITFSVMDKMQLTYPIFYIMFIIMIASCVFQVKFLNQAT 270 L +IS + + + ++ K L + + + +++I V + F +T Sbjct: 292 LLLISKRLPATSMAIPLIGKF-LLFGMVLVTMVVVICVIVLNIHFRTPST 340 >gi|82659109 retinoblastoma-associated factor 600 [Homo sapiens] Length = 5183 Score = 30.4 bits (67), Expect = 2.6 Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 5/52 (9%) Query: 6 PAGPGDSASAALDELSLNFTY----GAPGAGNGSLSGDWYRRNQIHLFGVLL 53 PAGPG S S++ +S + G+ G G G GD + N++H+ ++L Sbjct: 2927 PAGPG-SVSSSTGAISTTTGHQEGDGSEGEGEGETEGDVHTSNRLHMVRLML 2977 >gi|211063479 major facilitator superfamily domain containing 2 isoform 1 [Homo sapiens] Length = 543 Score = 30.0 bits (66), Expect = 3.4 Identities = 49/219 (22%), Positives = 89/219 (40%), Gaps = 31/219 (14%) Query: 50 GVLLAILGNLVISISLNIQKYSHLQLAQQEHPRPYFKSVLWWGGVLLMAVGETGNFAAYG 109 GV++ I + + L +++ AQQ P YF+ + L+M+ G G Sbjct: 260 GVIVCIYIICAVILILGVREQREPYEAQQSEPIAYFRGLR-----LVMSHGPYIKLIT-G 313 Query: 110 FAPITLIAPLGCVSVTGSAIISVTFLKDNLRASDLLGTTLAFAGTYLLVNFAPNITQAIS 169 F L L + V G+ ++ T+ TL F + + A ++ ++ Sbjct: 314 F----LFTSLAFMLVEGNFVLFCTY-------------TLGFRNEFQNLLLAIMLSATLT 356 Query: 170 ARTVQYYLV--GWQFLIYV-ILEILIFCILLYFYKRKGMKHMVILLTLVAILASLTVISV 226 Q++L G + +YV I + F IL+ M+ +I+ VA+ A ++V + Sbjct: 357 IPIWQWFLTRFGKKTAVYVGISSAVPFLILVAL-----MESNLIITYAVAVAAGISVAAA 411 Query: 227 KAVSGMITFSVMDKMQLTYPIFYIMFIIMIASCVFQVKF 265 + + V+D L P F+ I + VF KF Sbjct: 412 FLLPWSMLPDVIDDFHLKQPHFHGTEPIFFSFYVFFTKF 450 >gi|42713696 major facilitator superfamily domain containing 2 isoform 2 [Homo sapiens] Length = 530 Score = 30.0 bits (66), Expect = 3.4 Identities = 49/219 (22%), Positives = 89/219 (40%), Gaps = 31/219 (14%) Query: 50 GVLLAILGNLVISISLNIQKYSHLQLAQQEHPRPYFKSVLWWGGVLLMAVGETGNFAAYG 109 GV++ I + + L +++ AQQ P YF+ + L+M+ G G Sbjct: 247 GVIVCIYIICAVILILGVREQREPYEAQQSEPIAYFRGLR-----LVMSHGPYIKLIT-G 300 Query: 110 FAPITLIAPLGCVSVTGSAIISVTFLKDNLRASDLLGTTLAFAGTYLLVNFAPNITQAIS 169 F L L + V G+ ++ T+ TL F + + A ++ ++ Sbjct: 301 F----LFTSLAFMLVEGNFVLFCTY-------------TLGFRNEFQNLLLAIMLSATLT 343 Query: 170 ARTVQYYLV--GWQFLIYV-ILEILIFCILLYFYKRKGMKHMVILLTLVAILASLTVISV 226 Q++L G + +YV I + F IL+ M+ +I+ VA+ A ++V + Sbjct: 344 IPIWQWFLTRFGKKTAVYVGISSAVPFLILVAL-----MESNLIITYAVAVAAGISVAAA 398 Query: 227 KAVSGMITFSVMDKMQLTYPIFYIMFIIMIASCVFQVKF 265 + + V+D L P F+ I + VF KF Sbjct: 399 FLLPWSMLPDVIDDFHLKQPHFHGTEPIFFSFYVFFTKF 437 >gi|170650643 solute carrier family 22, member 23 isoform a [Homo sapiens] Length = 686 Score = 29.6 bits (65), Expect = 4.5 Identities = 10/36 (27%), Positives = 22/36 (61%) Query: 39 DWYRRNQIHLFGVLLAILGNLVISISLNIQKYSHLQ 74 DW R + LF ++ ++ L +++S+N+ +S L+ Sbjct: 252 DWVGRRPVLLFSIIFILIFGLTVALSVNVTMFSTLR 287 >gi|119220552 sidekick 1 [Homo sapiens] Length = 2213 Score = 29.3 bits (64), Expect = 5.9 Identities = 13/34 (38%), Positives = 18/34 (52%) Query: 5 APAGPGDSASAALDELSLNFTYGAPGAGNGSLSG 38 AP P A + + +LN ++G P A NG L G Sbjct: 1801 APGAPSFLAFSEITSTTLNVSWGEPAAANGILQG 1834 >gi|224465231 solute carrier family 9, member 11 [Homo sapiens] Length = 1124 Score = 29.3 bits (64), Expect = 5.9 Identities = 24/85 (28%), Positives = 42/85 (49%), Gaps = 4/85 (4%) Query: 148 TLAFAGTYLLVN---FAPNITQAISARTVQYYLVGWQFLIYVILEILIFCILLYFYKRKG 204 TLA A L ++ F P I I+ + ++ + ++ LIY I+I C L Y+ Sbjct: 276 TLALAAVGLNLDSLTFKPKIELVIT-KFLRIFSSVYEHLIYAFFGIVIGCGELSHYEFHT 334 Query: 205 MKHMVILLTLVAILASLTVISVKAV 229 + + IL T V ++ LT++ V + Sbjct: 335 IPFIFILFTTVNLVRLLTILLVSPI 359 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.328 0.141 0.427 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 12,222,819 Number of Sequences: 37866 Number of extensions: 484281 Number of successful extensions: 1895 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 10 Number of HSP's that attempted gapping in prelim test: 1869 Number of HSP's gapped (non-prelim): 26 length of query: 368 length of database: 18,247,518 effective HSP length: 104 effective length of query: 264 effective length of database: 14,309,454 effective search space: 3777695856 effective search space used: 3777695856 T: 11 A: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.8 bits) S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.