Guide to the Human Genome
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Search of human proteins with 13375789

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|13375789 pantothenate kinase 3 [Homo sapiens]
         (370 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|13375789 pantothenate kinase 3 [Homo sapiens]                      746   0.0  
gi|85838513 pantothenate kinase 2 isoform 1 preproprotein [Homo ...   629   e-180
gi|23510402 pantothenate kinase 1 isoform beta [Homo sapiens]         605   e-173
gi|23510400 pantothenate kinase 1 isoform alpha [Homo sapiens]        600   e-172
gi|24430175 pantothenate kinase 2 isoform 2 [Homo sapiens]            475   e-134
gi|24430167 pantothenate kinase 2 isoform 2 [Homo sapiens]            475   e-134
gi|23510398 pantothenate kinase 1 isoform gamma [Homo sapiens]        449   e-126
gi|8922665 pantothenate kinase 4 [Homo sapiens]                       209   3e-54
gi|239750468 PREDICTED: similar to Os05g0242100 [Homo sapiens]         32   0.91 
gi|239755937 PREDICTED: similar to Os05g0242100 [Homo sapiens]         30   3.5  
gi|239744762 PREDICTED: hypothetical protein XP_002343263 [Homo ...    30   3.5  
gi|95007022 tescalcin [Homo sapiens]                                   30   3.5  
gi|4507691 transformation/transcription domain-associated protei...    29   5.9  
gi|122937243 dual specificity phosphatase 27 [Homo sapiens]            29   7.7  

>gi|13375789 pantothenate kinase 3 [Homo sapiens]
          Length = 370

 Score =  746 bits (1927), Expect = 0.0
 Identities = 370/370 (100%), Positives = 370/370 (100%)

Query: 1   MKIKDAKKPSFPWFGMDIGGTLVKLSYFEPIDITAEEEQEEVESLKSIRKYLTSNVAYGS 60
           MKIKDAKKPSFPWFGMDIGGTLVKLSYFEPIDITAEEEQEEVESLKSIRKYLTSNVAYGS
Sbjct: 1   MKIKDAKKPSFPWFGMDIGGTLVKLSYFEPIDITAEEEQEEVESLKSIRKYLTSNVAYGS 60

Query: 61  TGIRDVHLELKDLTLFGRRGNLHFIRFPTQDLPTFIQMGRDKNFSTLQTVLCATGGGAYK 120
           TGIRDVHLELKDLTLFGRRGNLHFIRFPTQDLPTFIQMGRDKNFSTLQTVLCATGGGAYK
Sbjct: 61  TGIRDVHLELKDLTLFGRRGNLHFIRFPTQDLPTFIQMGRDKNFSTLQTVLCATGGGAYK 120

Query: 121 FEKDFRTIGNLHLHKLDELDCLVKGLLYIDSVSFNGQAECYYFANASEPERCQKMPFNLD 180
           FEKDFRTIGNLHLHKLDELDCLVKGLLYIDSVSFNGQAECYYFANASEPERCQKMPFNLD
Sbjct: 121 FEKDFRTIGNLHLHKLDELDCLVKGLLYIDSVSFNGQAECYYFANASEPERCQKMPFNLD 180

Query: 181 DPYPLLVVNIGSGVSILAVHSKDNYKRVTGTSLGGGTFLGLCSLLTGCESFEEALEMASK 240
           DPYPLLVVNIGSGVSILAVHSKDNYKRVTGTSLGGGTFLGLCSLLTGCESFEEALEMASK
Sbjct: 181 DPYPLLVVNIGSGVSILAVHSKDNYKRVTGTSLGGGTFLGLCSLLTGCESFEEALEMASK 240

Query: 241 GDSTQADKLVRDIYGGDYERFGLPGWAVASSFGNMIYKEKRESVSKEDLARATLVTITNN 300
           GDSTQADKLVRDIYGGDYERFGLPGWAVASSFGNMIYKEKRESVSKEDLARATLVTITNN
Sbjct: 241 GDSTQADKLVRDIYGGDYERFGLPGWAVASSFGNMIYKEKRESVSKEDLARATLVTITNN 300

Query: 301 IGSVARMCAVNEKINRVVFVGNFLRVNTLSMKLLAYALDYWSKGQLKALFLEHEGYFGAV 360
           IGSVARMCAVNEKINRVVFVGNFLRVNTLSMKLLAYALDYWSKGQLKALFLEHEGYFGAV
Sbjct: 301 IGSVARMCAVNEKINRVVFVGNFLRVNTLSMKLLAYALDYWSKGQLKALFLEHEGYFGAV 360

Query: 361 GALLGLPNFS 370
           GALLGLPNFS
Sbjct: 361 GALLGLPNFS 370


>gi|85838513 pantothenate kinase 2 isoform 1 preproprotein [Homo
           sapiens]
          Length = 570

 Score =  629 bits (1622), Expect = e-180
 Identities = 302/360 (83%), Positives = 336/360 (93%)

Query: 7   KKPSFPWFGMDIGGTLVKLSYFEPIDITAEEEQEEVESLKSIRKYLTSNVAYGSTGIRDV 66
           K+P FPWFG+DIGGTLVKL YFEP DITAEEE+EEVESLKSIRKYLTSNVAYGSTGIRDV
Sbjct: 207 KRPLFPWFGLDIGGTLVKLVYFEPKDITAEEEEEEVESLKSIRKYLTSNVAYGSTGIRDV 266

Query: 67  HLELKDLTLFGRRGNLHFIRFPTQDLPTFIQMGRDKNFSTLQTVLCATGGGAYKFEKDFR 126
           HLELKDLTL GR+GNLHFIRFPT D+P FIQMGRDKNFS+L TV CATGGGAYKFE+DF 
Sbjct: 267 HLELKDLTLCGRKGNLHFIRFPTHDMPAFIQMGRDKNFSSLHTVFCATGGGAYKFEQDFL 326

Query: 127 TIGNLHLHKLDELDCLVKGLLYIDSVSFNGQAECYYFANASEPERCQKMPFNLDDPYPLL 186
           TIG+L L KLDELDCL+KG+LYIDSV FNG+++CYYF N ++ E+CQK+PF+L +PYPLL
Sbjct: 327 TIGDLQLCKLDELDCLIKGILYIDSVGFNGRSQCYYFENPADSEKCQKLPFDLKNPYPLL 386

Query: 187 VVNIGSGVSILAVHSKDNYKRVTGTSLGGGTFLGLCSLLTGCESFEEALEMASKGDSTQA 246
           +VNIGSGVSILAV+SKDNYKRVTGTSLGGGTF GLC LLTGC +FEEALEMAS+GDST+ 
Sbjct: 387 LVNIGSGVSILAVYSKDNYKRVTGTSLGGGTFFGLCCLLTGCTTFEEALEMASRGDSTKV 446

Query: 247 DKLVRDIYGGDYERFGLPGWAVASSFGNMIYKEKRESVSKEDLARATLVTITNNIGSVAR 306
           DKLVRDIYGGDYERFGLPGWAVASSFGNM+ KEKRE+VSKEDLARATL+TITNNIGS+AR
Sbjct: 447 DKLVRDIYGGDYERFGLPGWAVASSFGNMMSKEKREAVSKEDLARATLITITNNIGSIAR 506

Query: 307 MCAVNEKINRVVFVGNFLRVNTLSMKLLAYALDYWSKGQLKALFLEHEGYFGAVGALLGL 366
           MCA+NE IN+VVFVGNFLR+NT++M+LLAYALDYWSKGQLKALF EHEGYFGAVGALL L
Sbjct: 507 MCALNENINQVVFVGNFLRINTIAMRLLAYALDYWSKGQLKALFSEHEGYFGAVGALLEL 566


>gi|23510402 pantothenate kinase 1 isoform beta [Homo sapiens]
          Length = 373

 Score =  605 bits (1559), Expect = e-173
 Identities = 293/366 (80%), Positives = 331/366 (90%)

Query: 1   MKIKDAKKPSFPWFGMDIGGTLVKLSYFEPIDITAEEEQEEVESLKSIRKYLTSNVAYGS 60
           MK+ + KK +FPWFGMDIGGTLVKL YFEP DITAEEEQEEVE+LKSIRKYLTSN AYG 
Sbjct: 1   MKLINGKKQTFPWFGMDIGGTLVKLVYFEPKDITAEEEQEEVENLKSIRKYLTSNTAYGK 60

Query: 61  TGIRDVHLELKDLTLFGRRGNLHFIRFPTQDLPTFIQMGRDKNFSTLQTVLCATGGGAYK 120
           TGIRDVHLELK+LT+ GR+GNLHFIRFP+  +  FIQMG +KNFS+L T LCATGGGA+K
Sbjct: 61  TGIRDVHLELKNLTMCGRKGNLHFIRFPSCAMHRFIQMGSEKNFSSLHTTLCATGGGAFK 120

Query: 121 FEKDFRTIGNLHLHKLDELDCLVKGLLYIDSVSFNGQAECYYFANASEPERCQKMPFNLD 180
           FE+DFR I +L LHKLDELDCL++GLLY+DSV FNG+ ECYYF N + PE CQK P+ LD
Sbjct: 121 FEEDFRMIADLQLHKLDELDCLIQGLLYVDSVGFNGKPECYYFENPTNPELCQKKPYCLD 180

Query: 181 DPYPLLVVNIGSGVSILAVHSKDNYKRVTGTSLGGGTFLGLCSLLTGCESFEEALEMASK 240
           +PYP+L+VN+GSGVSILAV+SKDNYKRVTGTSLGGGTFLGLC LLTGCE+FEEALEMA+K
Sbjct: 181 NPYPMLLVNMGSGVSILAVYSKDNYKRVTGTSLGGGTFLGLCCLLTGCETFEEALEMAAK 240

Query: 241 GDSTQADKLVRDIYGGDYERFGLPGWAVASSFGNMIYKEKRESVSKEDLARATLVTITNN 300
           GDST  DKLV+DIYGGDYERFGL G AVASSFGNM+ KEKR+S+SKEDLARATLVTITNN
Sbjct: 241 GDSTNVDKLVKDIYGGDYERFGLQGSAVASSFGNMMSKEKRDSISKEDLARATLVTITNN 300

Query: 301 IGSVARMCAVNEKINRVVFVGNFLRVNTLSMKLLAYALDYWSKGQLKALFLEHEGYFGAV 360
           IGS+ARMCA+NE I+RVVFVGNFLR+N +SMKLLAYA+D+WSKGQLKALFLEHEGYFGAV
Sbjct: 301 IGSIARMCALNENIDRVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLEHEGYFGAV 360

Query: 361 GALLGL 366
           GALL L
Sbjct: 361 GALLEL 366


>gi|23510400 pantothenate kinase 1 isoform alpha [Homo sapiens]
          Length = 598

 Score =  600 bits (1547), Expect = e-172
 Identities = 290/359 (80%), Positives = 326/359 (90%)

Query: 8   KPSFPWFGMDIGGTLVKLSYFEPIDITAEEEQEEVESLKSIRKYLTSNVAYGSTGIRDVH 67
           +P FPWFGMDIGGTLVKL YFEP DITAEEEQEEVE+LKSIRKYLTSN AYG TGIRDVH
Sbjct: 233 RPPFPWFGMDIGGTLVKLVYFEPKDITAEEEQEEVENLKSIRKYLTSNTAYGKTGIRDVH 292

Query: 68  LELKDLTLFGRRGNLHFIRFPTQDLPTFIQMGRDKNFSTLQTVLCATGGGAYKFEKDFRT 127
           LELK+LT+ GR+GNLHFIRFP+  +  FIQMG +KNFS+L T LCATGGGA+KFE+DFR 
Sbjct: 293 LELKNLTMCGRKGNLHFIRFPSCAMHRFIQMGSEKNFSSLHTTLCATGGGAFKFEEDFRM 352

Query: 128 IGNLHLHKLDELDCLVKGLLYIDSVSFNGQAECYYFANASEPERCQKMPFNLDDPYPLLV 187
           I +L LHKLDELDCL++GLLY+DSV FNG+ ECYYF N + PE CQK P+ LD+PYP+L+
Sbjct: 353 IADLQLHKLDELDCLIQGLLYVDSVGFNGKPECYYFENPTNPELCQKKPYCLDNPYPMLL 412

Query: 188 VNIGSGVSILAVHSKDNYKRVTGTSLGGGTFLGLCSLLTGCESFEEALEMASKGDSTQAD 247
           VN+GSGVSILAV+SKDNYKRVTGTSLGGGTFLGLC LLTGCE+FEEALEMA+KGDST  D
Sbjct: 413 VNMGSGVSILAVYSKDNYKRVTGTSLGGGTFLGLCCLLTGCETFEEALEMAAKGDSTNVD 472

Query: 248 KLVRDIYGGDYERFGLPGWAVASSFGNMIYKEKRESVSKEDLARATLVTITNNIGSVARM 307
           KLV+DIYGGDYERFGL G AVASSFGNM+ KEKR+S+SKEDLARATLVTITNNIGS+ARM
Sbjct: 473 KLVKDIYGGDYERFGLQGSAVASSFGNMMSKEKRDSISKEDLARATLVTITNNIGSIARM 532

Query: 308 CAVNEKINRVVFVGNFLRVNTLSMKLLAYALDYWSKGQLKALFLEHEGYFGAVGALLGL 366
           CA+NE I+RVVFVGNFLR+N +SMKLLAYA+D+WSKGQLKALFLEHEGYFGAVGALL L
Sbjct: 533 CALNENIDRVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLEHEGYFGAVGALLEL 591


>gi|24430175 pantothenate kinase 2 isoform 2 [Homo sapiens]
          Length = 279

 Score =  475 bits (1222), Expect = e-134
 Identities = 226/275 (82%), Positives = 256/275 (93%)

Query: 92  LPTFIQMGRDKNFSTLQTVLCATGGGAYKFEKDFRTIGNLHLHKLDELDCLVKGLLYIDS 151
           +P FIQMGRDKNFS+L TV CATGGGAYKFE+DF TIG+L L KLDELDCL+KG+LYIDS
Sbjct: 1   MPAFIQMGRDKNFSSLHTVFCATGGGAYKFEQDFLTIGDLQLCKLDELDCLIKGILYIDS 60

Query: 152 VSFNGQAECYYFANASEPERCQKMPFNLDDPYPLLVVNIGSGVSILAVHSKDNYKRVTGT 211
           V FNG+++CYYF N ++ E+CQK+PF+L +PYPLL+VNIGSGVSILAV+SKDNYKRVTGT
Sbjct: 61  VGFNGRSQCYYFENPADSEKCQKLPFDLKNPYPLLLVNIGSGVSILAVYSKDNYKRVTGT 120

Query: 212 SLGGGTFLGLCSLLTGCESFEEALEMASKGDSTQADKLVRDIYGGDYERFGLPGWAVASS 271
           SLGGGTF GLC LLTGC +FEEALEMAS+GDST+ DKLVRDIYGGDYERFGLPGWAVASS
Sbjct: 121 SLGGGTFFGLCCLLTGCTTFEEALEMASRGDSTKVDKLVRDIYGGDYERFGLPGWAVASS 180

Query: 272 FGNMIYKEKRESVSKEDLARATLVTITNNIGSVARMCAVNEKINRVVFVGNFLRVNTLSM 331
           FGNM+ KEKRE+VSKEDLARATL+TITNNIGS+ARMCA+NE IN+VVFVGNFLR+NT++M
Sbjct: 181 FGNMMSKEKREAVSKEDLARATLITITNNIGSIARMCALNENINQVVFVGNFLRINTIAM 240

Query: 332 KLLAYALDYWSKGQLKALFLEHEGYFGAVGALLGL 366
           +LLAYALDYWSKGQLKALF EHEGYFGAVGALL L
Sbjct: 241 RLLAYALDYWSKGQLKALFSEHEGYFGAVGALLEL 275


>gi|24430167 pantothenate kinase 2 isoform 2 [Homo sapiens]
          Length = 279

 Score =  475 bits (1222), Expect = e-134
 Identities = 226/275 (82%), Positives = 256/275 (93%)

Query: 92  LPTFIQMGRDKNFSTLQTVLCATGGGAYKFEKDFRTIGNLHLHKLDELDCLVKGLLYIDS 151
           +P FIQMGRDKNFS+L TV CATGGGAYKFE+DF TIG+L L KLDELDCL+KG+LYIDS
Sbjct: 1   MPAFIQMGRDKNFSSLHTVFCATGGGAYKFEQDFLTIGDLQLCKLDELDCLIKGILYIDS 60

Query: 152 VSFNGQAECYYFANASEPERCQKMPFNLDDPYPLLVVNIGSGVSILAVHSKDNYKRVTGT 211
           V FNG+++CYYF N ++ E+CQK+PF+L +PYPLL+VNIGSGVSILAV+SKDNYKRVTGT
Sbjct: 61  VGFNGRSQCYYFENPADSEKCQKLPFDLKNPYPLLLVNIGSGVSILAVYSKDNYKRVTGT 120

Query: 212 SLGGGTFLGLCSLLTGCESFEEALEMASKGDSTQADKLVRDIYGGDYERFGLPGWAVASS 271
           SLGGGTF GLC LLTGC +FEEALEMAS+GDST+ DKLVRDIYGGDYERFGLPGWAVASS
Sbjct: 121 SLGGGTFFGLCCLLTGCTTFEEALEMASRGDSTKVDKLVRDIYGGDYERFGLPGWAVASS 180

Query: 272 FGNMIYKEKRESVSKEDLARATLVTITNNIGSVARMCAVNEKINRVVFVGNFLRVNTLSM 331
           FGNM+ KEKRE+VSKEDLARATL+TITNNIGS+ARMCA+NE IN+VVFVGNFLR+NT++M
Sbjct: 181 FGNMMSKEKREAVSKEDLARATLITITNNIGSIARMCALNENINQVVFVGNFLRINTIAM 240

Query: 332 KLLAYALDYWSKGQLKALFLEHEGYFGAVGALLGL 366
           +LLAYALDYWSKGQLKALF EHEGYFGAVGALL L
Sbjct: 241 RLLAYALDYWSKGQLKALFSEHEGYFGAVGALLEL 275


>gi|23510398 pantothenate kinase 1 isoform gamma [Homo sapiens]
          Length = 314

 Score =  449 bits (1154), Expect = e-126
 Identities = 232/366 (63%), Positives = 266/366 (72%), Gaps = 59/366 (16%)

Query: 1   MKIKDAKKPSFPWFGMDIGGTLVKLSYFEPIDITAEEEQEEVESLKSIRKYLTSNVAYGS 60
           MK+ + KK +FPWFGMDIGGTLVKL YFEP DITAEEEQEEVE+LKSIRKYLTSN AYG 
Sbjct: 1   MKLINGKKQTFPWFGMDIGGTLVKLVYFEPKDITAEEEQEEVENLKSIRKYLTSNTAYGK 60

Query: 61  TGIRDVHLELKDLTLFGRRGNLHFIRFPTQDLPTFIQMGRDKNFSTLQTVLCATGGGAYK 120
           TGIRDVHLELK+LT+ GR+GNLHFIRFP+  +  FIQMG +KNFS+L T LCATGGGA+K
Sbjct: 61  TGIRDVHLELKNLTMCGRKGNLHFIRFPSCAMHRFIQMGSEKNFSSLHTTLCATGGGAFK 120

Query: 121 FEKDFRTIGNLHLHKLDELDCLVKGLLYIDSVSFNGQAECYYFANASEPERCQKMPFNLD 180
           FE+DFR I +L LHKLDELDCL++GLLY+DSV FNG+ ECYYF N + PE CQK P+ LD
Sbjct: 121 FEEDFRMIADLQLHKLDELDCLIQGLLYVDSVGFNGKPECYYFENPTNPELCQKKPYCLD 180

Query: 181 DPYPLLVVNIGSGVSILAVHSKDNYKRVTGTSLGGGTFLGLCSLLTGCESFEEALEMASK 240
           +PYP+L+VN+GSGVSILAV+SKDNYKRVTGTS G                    +    K
Sbjct: 181 NPYPMLLVNMGSGVSILAVYSKDNYKRVTGTSFGN-------------------MMSKEK 221

Query: 241 GDSTQADKLVRDIYGGDYERFGLPGWAVASSFGNMIYKEKRESVSKEDLARATLVTITNN 300
            DS   + L R                                        ATLVTITNN
Sbjct: 222 RDSISKEDLAR----------------------------------------ATLVTITNN 241

Query: 301 IGSVARMCAVNEKINRVVFVGNFLRVNTLSMKLLAYALDYWSKGQLKALFLEHEGYFGAV 360
           IGS+ARMCA+NE I+RVVFVGNFLR+N +SMKLLAYA+D+WSKGQLKALFLEHEGYFGAV
Sbjct: 242 IGSIARMCALNENIDRVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLEHEGYFGAV 301

Query: 361 GALLGL 366
           GALL L
Sbjct: 302 GALLEL 307


>gi|8922665 pantothenate kinase 4 [Homo sapiens]
          Length = 773

 Score =  209 bits (532), Expect = 3e-54
 Identities = 129/353 (36%), Positives = 200/353 (56%), Gaps = 25/353 (7%)

Query: 14  FGMDIGGTLVKLSYFEPIDITAEEEQEEVESLKSIRKYLTSNVAYGSTGIRDVHLELKDL 73
           F +DIGG+L KL+Y+  +       Q +V  ++S           G    R+     +  
Sbjct: 37  FAIDIGGSLTKLAYYSTV-------QHKVAKVRSFDHS-------GKDTEREHEPPYEIS 82

Query: 74  TLFGRRGNLHFIRFPTQDLPTFIQMGRDKNFSTLQTVLCATGGGAYKFEKDFRTIGNLHL 133
                   LHFI+F    +   +   +D   +T   V+ ATGGGAYKF+        L +
Sbjct: 83  VQEEITARLHFIKFENTYIEACLDFIKDHLVNTETKVIQATGGGAYKFKDLIEEKLRLKV 142

Query: 134 HKLDELDCLVKGLLYIDSVSFNGQAECYYFANASEPERCQKMPFNLDDP--YPLLVVNIG 191
            K D + CL+KG  ++     N   E + +   S+PE      F  + P  +P L+VNIG
Sbjct: 143 DKEDVMTCLIKGCNFVLK---NIPHEAFVYQKDSDPE----FRFQTNHPHIFPYLLVNIG 195

Query: 192 SGVSILAVHSKDNYKRVTGTSLGGGTFLGLCSLLTGCESFEEALEMASKGDSTQADKLVR 251
           SGVSI+ V ++D ++ V G+S+GGGTF GL +LLT  + F+E L +AS+G  +  D LVR
Sbjct: 196 SGVSIVKVETEDRFEWVGGSSIGGGTFWGLGALLTKTKKFDELLHLASRGQHSNVDMLVR 255

Query: 252 DIYGGDYERFGLPGWAVASSFGNMIYKEKRESVSKEDLARATLVTITNNIGSVARMCAVN 311
           D+YGG ++  GL G  +ASSFG     +  +  SKED+A++ L  I+N+IG +A + A  
Sbjct: 256 DVYGGAHQTLGLSGNLIASSFGKSATAD--QEFSKEDMAKSLLHMISNDIGQLACLHARL 313

Query: 312 EKINRVVFVGNFLRVNTLSMKLLAYALDYWSKGQLKALFLEHEGYFGAVGALL 364
             ++RV F G F+R + ++M+ + Y+++++SKG+++ALFL HEGY GA+GA L
Sbjct: 314 HSLDRVYFGGFFIRGHPVTMRTITYSINFFSKGEVQALFLRHEGYLGAIGAFL 366


>gi|239750468 PREDICTED: similar to Os05g0242100 [Homo sapiens]
          Length = 758

 Score = 32.0 bits (71), Expect = 0.91
 Identities = 47/160 (29%), Positives = 69/160 (43%), Gaps = 18/160 (11%)

Query: 52  LTSNVAYGSTGIRDVHLELKDLTLFG-------RRGNLHFIRFPTQDLPTFIQMGRDKNF 104
           L+ NV YG+ G  D   + +D    G       R+G   F  FP++D P  I+  RD  F
Sbjct: 173 LSQNV-YGAWGNLDTPPQAQDQVQSGLFLDVVVRQGASIFQLFPSKDQPLLIR--RDA-F 228

Query: 105 STLQTVLCATGG-GAYKFEKDFRTIGNLH--LHKLDELDCLVKGLLYIDSVSFNGQAECY 161
             L   L    G      E D  T   LH  LH   E +  V+G L++D V   G +   
Sbjct: 229 LILDLCLDILDGVTGLHLEGDGLTSQGLHEDLHPTSETEHQVQGGLFLDVVVRQGASIFQ 288

Query: 162 YFANASEPERCQKMPFNLDDPYPLLVVNIGSGVSILAVHS 201
            F +  +P   ++  F + D    L ++I +GV+ L   S
Sbjct: 289 LFPSKDQPLLVRRDAFLVLD----LCLDILNGVTRLHFES 324



 Score = 29.6 bits (65), Expect = 4.5
 Identities = 36/121 (29%), Positives = 52/121 (42%), Gaps = 10/121 (8%)

Query: 78  RRGNLHFIRFPTQDLPTFIQMGRDKNFSTLQTVLCATGGGA-YKFEKDFRTIGNLH--LH 134
           R+G   F  FP++D P  I+  RD  F  L   L    G      E D  T   LH  LH
Sbjct: 433 RQGASIFQLFPSKDQPLLIR--RDA-FLVLDLCLDILNGVTRLHLESDGLTSQGLHEDLH 489

Query: 135 KLDELDCLVKGLLYIDSVSFNGQAECYYFANASEPERCQKMPFNLDDPYPLLVVNIGSGV 194
              E +  V+G L++D V   G      F+   +P   ++  F + D    L ++I  GV
Sbjct: 490 PTSETEHQVQGGLFLDVVVRQGTTIFQLFSGKDQPLLVRRNAFLVLD----LCLDILDGV 545

Query: 195 S 195
           +
Sbjct: 546 T 546


>gi|239755937 PREDICTED: similar to Os05g0242100 [Homo sapiens]
          Length = 609

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 37/123 (30%), Positives = 54/123 (43%), Gaps = 10/123 (8%)

Query: 78  RRGNLHFIRFPTQDLPTFIQMGRDKNFSTLQTVLCATGGGA-YKFEKDFRTIGNLH--LH 134
           R+G   F  FP++D P  I+  RD  F  L   L    G      E D  T   LH  LH
Sbjct: 145 RQGASIFQLFPSKDQPLLIR--RDA-FLVLDLCLDILNGVTRLHLESDGLTSQGLHEDLH 201

Query: 135 KLDELDCLVKGLLYIDSVSFNGQAECYYFANASEPERCQKMPFNLDDPYPLLVVNIGSGV 194
              E +  V+G L++D V   G      F+   +P   ++  F + D    L ++I +GV
Sbjct: 202 PTSETEHQVQGGLFLDVVVRQGTTIFQLFSGKDQPLLVRRDAFLVLD----LCLDILNGV 257

Query: 195 SIL 197
           + L
Sbjct: 258 TRL 260


>gi|239744762 PREDICTED: hypothetical protein XP_002343263 [Homo
           sapiens]
          Length = 761

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 37/127 (29%), Positives = 55/127 (43%), Gaps = 10/127 (7%)

Query: 78  RRGNLHFIRFPTQDLPTFIQMGRDKNFSTLQTVLCATGGGA-YKFEKDFRTIGNLH--LH 134
           R+G   F  FP++D P  ++  RD  F  L   L    G      E D  T   LH  LH
Sbjct: 297 RQGASIFQLFPSKDQPLLVR--RDA-FLVLDLCLDILNGVTRLHLESDGLTSQGLHEDLH 353

Query: 135 KLDELDCLVKGLLYIDSVSFNGQAECYYFANASEPERCQKMPFNLDDPYPLLVVNIGSGV 194
              E +  V+G L++D V   G      F+   +P   ++  F + D    L ++I +GV
Sbjct: 354 PTSETEHQVQGGLFLDVVVRQGTTIFQLFSGKDQPLLVRRDAFLVLD----LCLDILNGV 409

Query: 195 SILAVHS 201
           + L   S
Sbjct: 410 TRLHFES 416


>gi|95007022 tescalcin [Homo sapiens]
          Length = 267

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 13/28 (46%), Positives = 18/28 (64%)

Query: 22  LVKLSYFEPIDITAEEEQEEVESLKSIR 49
           L  +SYF PID T +EEQ E+   + +R
Sbjct: 142 LTIMSYFRPIDTTMDEEQVELSRKEKLR 169


>gi|4507691 transformation/transcription domain-associated protein
            [Homo sapiens]
          Length = 3830

 Score = 29.3 bits (64), Expect = 5.9
 Identities = 22/91 (24%), Positives = 39/91 (42%), Gaps = 2/91 (2%)

Query: 257  DYERFGLPGWAVASSFGNMIYKEKRESVSKEDLARATLVTITNNIGSVARMCAVNEKINR 316
            + +RF     A+++ FG        +S+  + + +    T+ N +  VA  C VN+  N 
Sbjct: 2039 EVKRFRTATGAISAVFGRSQSLPGADSLLAKPIDKQHTDTVVNFLIRVA--CQVNDNTNT 2096

Query: 317  VVFVGNFLRVNTLSMKLLAYALDYWSKGQLK 347
                G  L    +++   A   D W K +LK
Sbjct: 2097 AGSPGEVLSRRCVNLLKTALRPDMWPKSELK 2127


>gi|122937243 dual specificity phosphatase 27 [Homo sapiens]
          Length = 1158

 Score = 28.9 bits (63), Expect = 7.7
 Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 11/83 (13%)

Query: 190 IGSGVSILAVHSKDNY-KRVTGTSLGGGTFLGLCSLLTGCESFEEALEMASKGDSTQADK 248
           +G+ V  L V  +D+    ++G+SLG  T       L   E  E+  E   KG    +DK
Sbjct: 305 LGARVHALTVEEEDDSASHLSGSSLGKATQASKPLTLIDEEEEEKLYEQWKKGQGLLSDK 364

Query: 249 LVRDIYGGDYERFGLPGWAVASS 271
           + +D  GG        GW  ASS
Sbjct: 365 VPQD--GG--------GWRSASS 377


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.138    0.410 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,305,322
Number of Sequences: 37866
Number of extensions: 570476
Number of successful extensions: 1185
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1168
Number of HSP's gapped (non-prelim): 24
length of query: 370
length of database: 18,247,518
effective HSP length: 104
effective length of query: 266
effective length of database: 14,309,454
effective search space: 3806314764
effective search space used: 3806314764
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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