Search of human proteins with 13375616

Search of human proteins with 13375616

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|13375616 fatty acid desaturase 3 [Homo sapiens]
         (445 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|13375616 fatty acid desaturase 3 [Homo sapiens]                    943   0.0  
gi|4758334 fatty acid desaturase 2 [Homo sapiens]                     610   e-174
gi|214831730 fatty acid desaturase 1 [Homo sapiens]                   497   e-140
gi|4503183 cytochrome b-5 isoform 2 [Homo sapiens]                     53   5e-07
gi|41281768 cytochrome b-5 isoform 1 [Homo sapiens]                    53   5e-07
gi|83921614 cytochrome b5 outer mitochondrial membrane precursor...    47   3e-05
gi|84875541 cytochrome b5 reductase 4 [Homo sapiens]                   46   6e-05
gi|205360949 fatty acid 2-hydroxylase [Homo sapiens]                   42   0.001
gi|116812626 fatty acid desaturase domain family, member 6 [Homo...    38   0.016
gi|74099704 sulfite oxidase [Homo sapiens]                             37   0.036
gi|74099702 sulfite oxidase [Homo sapiens]                             37   0.036
gi|74099694 sulfite oxidase [Homo sapiens]                             37   0.036
gi|126032348 hect domain and RLD 2 [Homo sapiens]                      34   0.31 
gi|207113139 degenerative spermatocyte homolog 2, lipid desatura...    32   1.2  
gi|40255060 cytochrome b5 domain containing 1 [Homo sapiens]           31   2.0  
gi|4557481 ATP-binding cassette, sub-family C (CFTR/MRP), member...    30   4.4  
gi|194294532 alpha 1 type XIII collagen isoform 20 [Homo sapiens]      30   5.8  
gi|22027609 alpha 1 type XIII collagen isoform 19 [Homo sapiens]       30   5.8  
gi|22027607 alpha 1 type XIII collagen isoform 18 [Homo sapiens]       30   5.8  
gi|22027605 alpha 1 type XIII collagen isoform 17 [Homo sapiens]       30   5.8  
gi|22027603 alpha 1 type XIII collagen isoform 16 [Homo sapiens]       30   5.8  
gi|22027601 alpha 1 type XIII collagen isoform 15 [Homo sapiens]       30   5.8  
gi|22027599 alpha 1 type XIII collagen isoform 14 [Homo sapiens]       30   5.8  
gi|22027597 alpha 1 type XIII collagen isoform 13 [Homo sapiens]       30   5.8  
gi|22027595 alpha 1 type XIII collagen isoform 12 [Homo sapiens]       30   5.8  
gi|22027593 alpha 1 type XIII collagen isoform 11 [Homo sapiens]       30   5.8  
gi|22027591 alpha 1 type XIII collagen isoform 10 [Homo sapiens]       30   5.8  
gi|22027589 alpha 1 type XIII collagen isoform 9 [Homo sapiens]        30   5.8  
gi|22027583 alpha 1 type XIII collagen isoform 7 [Homo sapiens]        30   5.8  
gi|22027580 alpha 1 type XIII collagen isoform 6 [Homo sapiens]        30   5.8  

>gi|13375616 fatty acid desaturase 3 [Homo sapiens]
          Length = 445

 Score =  943 bits (2437), Expect = 0.0
 Identities = 445/445 (100%), Positives = 445/445 (100%)

Query: 1   MGGVGEPGPREGPAQPGAPLPTFCWEQIRAHDQPGDKWLVIERRVYDISRWAQRHPGGSR 60
           MGGVGEPGPREGPAQPGAPLPTFCWEQIRAHDQPGDKWLVIERRVYDISRWAQRHPGGSR
Sbjct: 1   MGGVGEPGPREGPAQPGAPLPTFCWEQIRAHDQPGDKWLVIERRVYDISRWAQRHPGGSR 60

Query: 61  LIGHHGAEDATDAFRAFHQDLNFVRKFLQPLLIGELAPEEPSQDGPLNAQLVEDFRALHQ 120
           LIGHHGAEDATDAFRAFHQDLNFVRKFLQPLLIGELAPEEPSQDGPLNAQLVEDFRALHQ
Sbjct: 61  LIGHHGAEDATDAFRAFHQDLNFVRKFLQPLLIGELAPEEPSQDGPLNAQLVEDFRALHQ 120

Query: 121 AAEDMKLFDASPTFFAFLLGHILAMEVLAWLLIYLLGPGWVPSALAAFILAISQAQSWCL 180
           AAEDMKLFDASPTFFAFLLGHILAMEVLAWLLIYLLGPGWVPSALAAFILAISQAQSWCL
Sbjct: 121 AAEDMKLFDASPTFFAFLLGHILAMEVLAWLLIYLLGPGWVPSALAAFILAISQAQSWCL 180

Query: 181 QHDLGHASIFKKSWWNHVAQKFVMGQLKGFSAHWWNFRHFQHHAKPNIFHKDPDVTVAPV 240
           QHDLGHASIFKKSWWNHVAQKFVMGQLKGFSAHWWNFRHFQHHAKPNIFHKDPDVTVAPV
Sbjct: 181 QHDLGHASIFKKSWWNHVAQKFVMGQLKGFSAHWWNFRHFQHHAKPNIFHKDPDVTVAPV 240

Query: 241 FLLGESSVEYGKKKRRYLPYNQQHLYFFLIGPPLLTLVNFEVENLAYMLVCMQWADLLWA 300
           FLLGESSVEYGKKKRRYLPYNQQHLYFFLIGPPLLTLVNFEVENLAYMLVCMQWADLLWA
Sbjct: 241 FLLGESSVEYGKKKRRYLPYNQQHLYFFLIGPPLLTLVNFEVENLAYMLVCMQWADLLWA 300

Query: 301 ASFYARFFLSYLPFYGVPGVLLFFVAVRVLESHWFVWITQMNHIPKEIGHEKHRDWVSSQ 360
           ASFYARFFLSYLPFYGVPGVLLFFVAVRVLESHWFVWITQMNHIPKEIGHEKHRDWVSSQ
Sbjct: 301 ASFYARFFLSYLPFYGVPGVLLFFVAVRVLESHWFVWITQMNHIPKEIGHEKHRDWVSSQ 360

Query: 361 LAATCNVEPSLFTNWFSGHLNFQIEHHLFPRMPRHNYSRVAPLVKSLCAKHGLSYEVKPF 420
           LAATCNVEPSLFTNWFSGHLNFQIEHHLFPRMPRHNYSRVAPLVKSLCAKHGLSYEVKPF
Sbjct: 361 LAATCNVEPSLFTNWFSGHLNFQIEHHLFPRMPRHNYSRVAPLVKSLCAKHGLSYEVKPF 420

Query: 421 LTALVDIVRSLKKSGDIWLDAYLHQ 445
           LTALVDIVRSLKKSGDIWLDAYLHQ
Sbjct: 421 LTALVDIVRSLKKSGDIWLDAYLHQ 445


>gi|4758334 fatty acid desaturase 2 [Homo sapiens]
          Length = 444

 Score =  610 bits (1572), Expect = e-174
 Identities = 279/446 (62%), Positives = 342/446 (76%), Gaps = 3/446 (0%)

Query: 1   MGGVGEPGPREGPAQPGAPLPTFCWEQIRAHDQPGDKWLVIERRVYDISRWAQRHPGGSR 60
           MG  G  G  EG A+    +PTF WE+I+ H+   D+WLVI+R+VY+I++W+ +HPGG R
Sbjct: 1   MGKGGNQG--EGAAEREVSVPTFSWEEIQKHNLRTDRWLVIDRKVYNITKWSIQHPGGQR 58

Query: 61  LIGHHGAEDATDAFRAFHQDLNFVRKFLQPLLIGELAPEEPSQDGPLNAQLVEDFRALHQ 120
           +IGH+  EDATDAFRAFH DL FV KFL+PLLIGELAPEEPSQD   N+++ EDFRAL +
Sbjct: 59  VIGHYAGEDATDAFRAFHPDLEFVGKFLKPLLIGELAPEEPSQDHGKNSKITEDFRALRK 118

Query: 121 AAEDMKLFDASPTFFAFLLGHILAMEVLAWLLIYLLGPGWVPSALAAFILAISQAQSWCL 180
            AEDM LF  +  FF  LL HI+A+E +AW  ++  G GW+P+ + AF+LA SQAQ+  L
Sbjct: 119 TAEDMNLFKTNHVFFLLLLAHIIALESIAWFTVFYFGNGWIPTLITAFVLATSQAQAGWL 178

Query: 181 QHDLGHASIFKKSWWNHVAQKFVMGQLKGFSAHWWNFRHFQHHAKPNIFHKDPDVTVAPV 240
           QHD GH S+++K  WNH+  KFV+G LKG SA+WWN RHFQHHAKPNIFHKDPDV +  V
Sbjct: 179 QHDYGHLSVYRKPKWNHLVHKFVIGHLKGASANWWNHRHFQHHAKPNIFHKDPDVNMLHV 238

Query: 241 FLLGE-SSVEYGKKKRRYLPYNQQHLYFFLIGPPLLTLVNFEVENLAYMLVCMQWADLLW 299
           F+LGE   +EYGKKK +YLPYN QH YFFLIGPPLL  + F+ + +  M+V   W DL W
Sbjct: 239 FVLGEWQPIEYGKKKLKYLPYNHQHEYFFLIGPPLLIPMYFQYQIIMTMIVHKNWVDLAW 298

Query: 300 AASFYARFFLSYLPFYGVPGVLLFFVAVRVLESHWFVWITQMNHIPKEIGHEKHRDWVSS 359
           A S+Y RFF++Y+PFYG+ G LLF   +R LESHWFVW+TQMNHI  EI  E +RDW SS
Sbjct: 299 AVSYYIRFFITYIPFYGILGALLFLNFIRFLESHWFVWVTQMNHIVMEIDQEAYRDWFSS 358

Query: 360 QLAATCNVEPSLFTNWFSGHLNFQIEHHLFPRMPRHNYSRVAPLVKSLCAKHGLSYEVKP 419
           QL ATCNVE S F +WFSGHLNFQIEHHLFP MPRHN  ++APLVKSLCAKHG+ Y+ KP
Sbjct: 359 QLTATCNVEQSFFNDWFSGHLNFQIEHHLFPTMPRHNLHKIAPLVKSLCAKHGIEYQEKP 418

Query: 420 FLTALVDIVRSLKKSGDIWLDAYLHQ 445
            L AL+DI+RSLKKSG +WLDAYLH+
Sbjct: 419 LLRALLDIIRSLKKSGKLWLDAYLHK 444


>gi|214831730 fatty acid desaturase 1 [Homo sapiens]
          Length = 501

 Score =  497 bits (1279), Expect = e-140
 Identities = 236/450 (52%), Positives = 306/450 (68%), Gaps = 7/450 (1%)

Query: 3   GVGEPGPREGP--AQPGAPLPT---FCWEQIRAHDQPGDKWLVIERRVYDISRWAQRHPG 57
           GV  P     P  A+  A  PT   F W+++       ++WLVI+R+VY+IS + +RHPG
Sbjct: 52  GVARPAMAPDPVAAETAAQGPTPRYFTWDEVAQRSGCEERWLVIDRKVYNISEFTRRHPG 111

Query: 58  GSRLIGHHGAEDATDAFRAFHQDLNFVRKFLQPLLIGELAPEEPSQDGPLNAQLVEDFRA 117
           GSR+I H+  +DATD F AFH +   V+K++  LLIGEL+PE+PS +   N +L ++FR 
Sbjct: 112 GSRVISHYAGQDATDPFVAFHINKGLVKKYMNSLLIGELSPEQPSFEPTKNKELTDEFRE 171

Query: 118 LHQAAEDMKLFDASPTFFAFLLGHILAMEVLAWLLIYLLGPGWVPSALAAFILAISQAQS 177
           L    E M L  A+  FF   L HIL ++  AWL +++ G  ++P  L A +L+  QAQ+
Sbjct: 172 LRATVERMGLMKANHVFFLLYLLHILLLDGAAWLTLWVFGTSFLPFLLCAVLLSAVQAQA 231

Query: 178 WCLQHDLGHASIFKKSWWNHVAQKFVMGQLKGFSAHWWNFRHFQHHAKPNIFHKDPDVTV 237
             LQHD GH S+F  S WNH+   FV+G LKG  A WWN  HFQHHAKPN F KDPD+ +
Sbjct: 232 GWLQHDFGHLSVFSTSKWNHLLHHFVIGHLKGAPASWWNHMHFQHHAKPNCFRKDPDINM 291

Query: 238 APVFL-LGES-SVEYGKKKRRYLPYNQQHLYFFLIGPPLLTLVNFEVENLAYMLVCMQWA 295
            P F  LG+  SVE GK+K++Y+PYN QH YFFLIGPP L  + F+     +++   +W 
Sbjct: 292 HPFFFALGKILSVELGKQKKKYMPYNHQHKYFFLIGPPALLPLYFQWYIFYFVIQRKKWV 351

Query: 296 DLLWAASFYARFFLSYLPFYGVPGVLLFFVAVRVLESHWFVWITQMNHIPKEIGHEKHRD 355
           DL W  +FY RFFL+Y+P  G+   L  F  VR LES+WFVW+TQMNHIP  I H+++ D
Sbjct: 352 DLAWMITFYVRFFLTYVPLLGLKAFLGLFFIVRFLESNWFVWVTQMNHIPMHIDHDRNMD 411

Query: 356 WVSSQLAATCNVEPSLFTNWFSGHLNFQIEHHLFPRMPRHNYSRVAPLVKSLCAKHGLSY 415
           WVS+QL ATCNV  S F +WFSGHLNFQIEHHLFP MPRHNY +VAPLV+SLCAKHG+ Y
Sbjct: 412 WVSTQLQATCNVHKSAFNDWFSGHLNFQIEHHLFPTMPRHNYHKVAPLVQSLCAKHGIEY 471

Query: 416 EVKPFLTALVDIVRSLKKSGDIWLDAYLHQ 445
           + KP L+A  DI+ SLK+SG +WLDAYLHQ
Sbjct: 472 QSKPLLSAFADIIHSLKESGQLWLDAYLHQ 501


>gi|4503183 cytochrome b-5 isoform 2 [Homo sapiens]
          Length = 98

 Score = 53.1 bits (126), Expect = 5e-07
 Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 1/75 (1%)

Query: 26  EQIRAHDQPGDKWLVIERRVYDISRWAQRHPGGSRLIGHHGAEDATDAFRAFHQDLNFVR 85
           E+I+ H+     WL++  +VYD++++ + HPGG  ++      DAT+ F       +  R
Sbjct: 15  EEIQKHNHSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTD-AR 73

Query: 86  KFLQPLLIGELAPEE 100
           +  +  +IGEL P++
Sbjct: 74  EMSKTFIIGELHPDD 88


>gi|41281768 cytochrome b-5 isoform 1 [Homo sapiens]
          Length = 134

 Score = 53.1 bits (126), Expect = 5e-07
 Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 1/75 (1%)

Query: 26  EQIRAHDQPGDKWLVIERRVYDISRWAQRHPGGSRLIGHHGAEDATDAFRAFHQDLNFVR 85
           E+I+ H+     WL++  +VYD++++ + HPGG  ++      DAT+ F       +  R
Sbjct: 15  EEIQKHNHSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTD-AR 73

Query: 86  KFLQPLLIGELAPEE 100
           +  +  +IGEL P++
Sbjct: 74  EMSKTFIIGELHPDD 88


>gi|83921614 cytochrome b5 outer mitochondrial membrane precursor
           [Homo sapiens]
          Length = 150

 Score = 47.4 bits (111), Expect = 3e-05
 Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 1/75 (1%)

Query: 26  EQIRAHDQPGDKWLVIERRVYDISRWAQRHPGGSRLIGHHGAEDATDAFRAFHQDLNFVR 85
           E++   +   + WLVI  RVYD++R+   HPGG  ++      DA+++F       +  R
Sbjct: 30  EEVAKRNSLKELWLVIHGRVYDVTRFLNEHPGGEEVLLEQAGVDASESFEDVGHSSD-AR 88

Query: 86  KFLQPLLIGELAPEE 100
           + L+   IG++ P +
Sbjct: 89  EMLKQYYIGDIHPSD 103


>gi|84875541 cytochrome b5 reductase 4 [Homo sapiens]
          Length = 521

 Score = 46.2 bits (108), Expect = 6e-05
 Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 1/72 (1%)

Query: 26  EQIRAHDQPGDKWLVIERRVYDISRWAQRHPGGSRLIGHHGAEDATDAFRAFHQDLNFVR 85
           E+++ H++  D W+ I   VY++S + + HPGG   +      D T+ F   H+ +N+  
Sbjct: 60  EELKKHNKKDDCWICIRGFVYNVSPYMEYHPGGEDELMRAAGSDGTELFDQVHRWVNY-E 118

Query: 86  KFLQPLLIGELA 97
             L+  L+G +A
Sbjct: 119 SMLKECLVGRMA 130


>gi|205360949 fatty acid 2-hydroxylase [Homo sapiens]
          Length = 372

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 3/89 (3%)

Query: 13  PAQPGAPLPTFCWEQIRAHDQPGDKWLVIERRVYDISRWAQRHPGGSRLIGHHGAED-AT 71
           PA P  P  +F   +++     G  W+    R+YD+S + + HPGG +L+     +D + 
Sbjct: 3   PAPP--PAASFSPSEVQRRLAAGACWVRRGARLYDLSSFVRHHPGGEQLLRARAGQDISA 60

Query: 72  DAFRAFHQDLNFVRKFLQPLLIGELAPEE 100
           D     H+     R++L+   +GEL  E+
Sbjct: 61  DLDGPPHRHSANARRWLEQYYVGELRGEQ 89


>gi|116812626 fatty acid desaturase domain family, member 6 [Homo
           sapiens]
          Length = 350

 Score = 38.1 bits (87), Expect = 0.016
 Identities = 54/251 (21%), Positives = 90/251 (35%), Gaps = 33/251 (13%)

Query: 182 HDLGHASIFKKSWWNHVAQKFVMGQLKGFSAHWWNFRHFQ-HHAKPNIFHKDPDVTVAPV 240
           H   H ++ +   W+ +   F +     F+A      H + HHA  N+            
Sbjct: 96  HLATHGALTESKRWSKIWLLFFVEVCTAFTAEHATHGHVKMHHAYTNVVG---------- 145

Query: 241 FLLGESSVEYGKKKRRYLPYNQQHLYFFL------IGPPLLTLVNFEVENLAYMLVCMQW 294
             LG+SS          LP   +++Y FL      I  PL+ +       L   L  +  
Sbjct: 146 --LGDSSTWR-------LPCLNRYVYMFLAPFLLPIATPLVAVERLRKVELGTALRTLAL 196

Query: 295 ADLLWAASFYARFFLSYLPFYGVPGVLLFFVAVRVLESHWFVWITQMNHI--PKEIGHEK 352
             L   + ++    L+   F      L      R L +H ++ +    HI  P      K
Sbjct: 197 ISLGLYSHYW--LLLNVSGFKNPSSALGCMFLTRSLLAHPYLHVNIFQHIGLPMFSRDNK 254

Query: 353 HRDWVSSQLAATCNVEPSLFTNWFSGH--LNFQIEHHLFPRMPRHNYSRVAPLVKSLCAK 410
            R  +        N+      +W  GH  ++  +EHHLFPR+  +   +V P+V     +
Sbjct: 255 PRR-IHMMSLGVLNLARLPVLDWAFGHSIISCHVEHHLFPRLSDNMCLKVKPVVSQFLRE 313

Query: 411 HGLSYEVKPFL 421
             L Y    +L
Sbjct: 314 KQLPYNEDSYL 324


>gi|74099704 sulfite oxidase [Homo sapiens]
          Length = 545

 Score = 37.0 bits (84), Expect = 0.036
 Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 4/78 (5%)

Query: 26  EQIRAHDQPGDK-WLVIERRVYDISRWAQRHPGG--SRLIGHHGAEDATDAFRAFHQDLN 82
           E++ +H  P    W+ +   V+D++ +   HPGG    ++   G  +   A  A H   +
Sbjct: 88  EEVSSHTSPETGIWVTLGSEVFDVTEFVDLHPGGPSKLMLAAGGPLEPFWALYAVHNQ-S 146

Query: 83  FVRKFLQPLLIGELAPEE 100
            VR+ L    IGEL PE+
Sbjct: 147 HVRELLAQYKIGELNPED 164


>gi|74099702 sulfite oxidase [Homo sapiens]
          Length = 545

 Score = 37.0 bits (84), Expect = 0.036
 Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 4/78 (5%)

Query: 26  EQIRAHDQPGDK-WLVIERRVYDISRWAQRHPGG--SRLIGHHGAEDATDAFRAFHQDLN 82
           E++ +H  P    W+ +   V+D++ +   HPGG    ++   G  +   A  A H   +
Sbjct: 88  EEVSSHTSPETGIWVTLGSEVFDVTEFVDLHPGGPSKLMLAAGGPLEPFWALYAVHNQ-S 146

Query: 83  FVRKFLQPLLIGELAPEE 100
            VR+ L    IGEL PE+
Sbjct: 147 HVRELLAQYKIGELNPED 164


>gi|74099694 sulfite oxidase [Homo sapiens]
          Length = 545

 Score = 37.0 bits (84), Expect = 0.036
 Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 4/78 (5%)

Query: 26  EQIRAHDQPGDK-WLVIERRVYDISRWAQRHPGG--SRLIGHHGAEDATDAFRAFHQDLN 82
           E++ +H  P    W+ +   V+D++ +   HPGG    ++   G  +   A  A H   +
Sbjct: 88  EEVSSHTSPETGIWVTLGSEVFDVTEFVDLHPGGPSKLMLAAGGPLEPFWALYAVHNQ-S 146

Query: 83  FVRKFLQPLLIGELAPEE 100
            VR+ L    IGEL PE+
Sbjct: 147 HVRELLAQYKIGELNPED 164


>gi|126032348 hect domain and RLD 2 [Homo sapiens]
          Length = 4834

 Score = 33.9 bits (76), Expect = 0.31
 Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 10/95 (10%)

Query: 31   HDQPGDKWLVIERRVYDISRWAQRHPGGSRLIGHHGAEDATDAFRAFHQDLNFVRKFLQP 90
            H++ G  W VI+ +VYDI  +  +   G+ ++     ED   A  A  Q     R+ +  
Sbjct: 1218 HNKDGGFWTVIDGKVYDIKDFQTQSLTGNSILAQFAGEDPVVALEAALQ-FEDTRESMHA 1276

Query: 91   LLIGELAPEEPSQD-------GPLNAQLVEDFRAL 118
              +G+    EP Q+       G L++ L++  R L
Sbjct: 1277 FCVGQYL--EPDQEIVTIPDLGSLSSPLIDTERNL 1309


>gi|207113139 degenerative spermatocyte homolog 2, lipid desaturase
           [Homo sapiens]
          Length = 323

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 4/38 (10%)

Query: 374 NWFSGHLNFQIEHHLFPRMPRHNYSRVAPLVKSLCAKH 411
           NW + ++ + +EHH FP +P +N     PLV+ +  ++
Sbjct: 250 NWITFNVGYHVEHHDFPSIPGYN----LPLVRKIAPEY 283


>gi|40255060 cytochrome b5 domain containing 1 [Homo sapiens]
          Length = 228

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 5/67 (7%)

Query: 27 QIRAHDQPGDKWLVIERRVYDISRWAQRHPGGSRL--IGHHGAEDATDAFRAFHQDLNFV 84
          ++  H++P D W+    RVYD++  AQ + G   L  I     +D +  F    +D   +
Sbjct: 24 EVAQHNRPEDLWVSYLGRVYDLTSLAQEYKGNLLLKPIVEVAGQDISHWFDPKTRD---I 80

Query: 85 RKFLQPL 91
          RK + PL
Sbjct: 81 RKHIDPL 87


>gi|4557481 ATP-binding cassette, sub-family C (CFTR/MRP), member 2
           [Homo sapiens]
          Length = 1545

 Score = 30.0 bits (66), Expect = 4.4
 Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 12/91 (13%)

Query: 110 QLVEDFRALHQAAEDMKLFDASPTFFAFLLGHILAMEVLAWLLIYLLGPGWVPSALAA-- 167
           QL+  +++  + +   KL+ A   F  FLL  ILA   LA +L    G   VP+      
Sbjct: 47  QLLHVYKSRTKRSSTTKLYLAKQVFVGFLL--ILAAIELALVLTEDSGQATVPAVRYTNP 104

Query: 168 --------FILAISQAQSWCLQHDLGHASIF 190
                    +L I  ++ WC+Q +    S+F
Sbjct: 105 SLYLGTWLLVLLIQYSRQWCVQKNSWFLSLF 135


>gi|194294532 alpha 1 type XIII collagen isoform 20 [Homo sapiens]
          Length = 717

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 16/36 (44%), Positives = 17/36 (47%)

Query: 2   GGVGEPGPREGPAQPGAPLPTFCWEQIRAHDQPGDK 37
           GG GEPGP   P  PG         Q+    QPGDK
Sbjct: 382 GGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDK 417


>gi|22027609 alpha 1 type XIII collagen isoform 19 [Homo sapiens]
          Length = 610

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 16/36 (44%), Positives = 17/36 (47%)

Query: 2   GGVGEPGPREGPAQPGAPLPTFCWEQIRAHDQPGDK 37
           GG GEPGP   P  PG         Q+    QPGDK
Sbjct: 331 GGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDK 366


>gi|22027607 alpha 1 type XIII collagen isoform 18 [Homo sapiens]
          Length = 655

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 16/36 (44%), Positives = 17/36 (47%)

Query: 2   GGVGEPGPREGPAQPGAPLPTFCWEQIRAHDQPGDK 37
           GG GEPGP   P  PG         Q+    QPGDK
Sbjct: 320 GGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDK 355


>gi|22027605 alpha 1 type XIII collagen isoform 17 [Homo sapiens]
          Length = 657

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 16/36 (44%), Positives = 17/36 (47%)

Query: 2   GGVGEPGPREGPAQPGAPLPTFCWEQIRAHDQPGDK 37
           GG GEPGP   P  PG         Q+    QPGDK
Sbjct: 322 GGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDK 357


>gi|22027603 alpha 1 type XIII collagen isoform 16 [Homo sapiens]
          Length = 660

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 16/36 (44%), Positives = 17/36 (47%)

Query: 2   GGVGEPGPREGPAQPGAPLPTFCWEQIRAHDQPGDK 37
           GG GEPGP   P  PG         Q+    QPGDK
Sbjct: 325 GGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDK 360


>gi|22027601 alpha 1 type XIII collagen isoform 15 [Homo sapiens]
          Length = 668

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 16/36 (44%), Positives = 17/36 (47%)

Query: 2   GGVGEPGPREGPAQPGAPLPTFCWEQIRAHDQPGDK 37
           GG GEPGP   P  PG         Q+    QPGDK
Sbjct: 360 GGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDK 395


>gi|22027599 alpha 1 type XIII collagen isoform 14 [Homo sapiens]
          Length = 664

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 16/36 (44%), Positives = 17/36 (47%)

Query: 2   GGVGEPGPREGPAQPGAPLPTFCWEQIRAHDQPGDK 37
           GG GEPGP   P  PG         Q+    QPGDK
Sbjct: 329 GGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDK 364


>gi|22027597 alpha 1 type XIII collagen isoform 13 [Homo sapiens]
          Length = 690

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 16/36 (44%), Positives = 17/36 (47%)

Query: 2   GGVGEPGPREGPAQPGAPLPTFCWEQIRAHDQPGDK 37
           GG GEPGP   P  PG         Q+    QPGDK
Sbjct: 382 GGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDK 417


>gi|22027595 alpha 1 type XIII collagen isoform 12 [Homo sapiens]
          Length = 691

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 16/36 (44%), Positives = 17/36 (47%)

Query: 2   GGVGEPGPREGPAQPGAPLPTFCWEQIRAHDQPGDK 37
           GG GEPGP   P  PG         Q+    QPGDK
Sbjct: 382 GGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDK 417


>gi|22027593 alpha 1 type XIII collagen isoform 11 [Homo sapiens]
          Length = 686

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 16/36 (44%), Positives = 17/36 (47%)

Query: 2   GGVGEPGPREGPAQPGAPLPTFCWEQIRAHDQPGDK 37
           GG GEPGP   P  PG         Q+    QPGDK
Sbjct: 363 GGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDK 398


>gi|22027591 alpha 1 type XIII collagen isoform 10 [Homo sapiens]
          Length = 676

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 16/36 (44%), Positives = 17/36 (47%)

Query: 2   GGVGEPGPREGPAQPGAPLPTFCWEQIRAHDQPGDK 37
           GG GEPGP   P  PG         Q+    QPGDK
Sbjct: 341 GGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDK 376


>gi|22027589 alpha 1 type XIII collagen isoform 9 [Homo sapiens]
          Length = 688

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 16/36 (44%), Positives = 17/36 (47%)

Query: 2   GGVGEPGPREGPAQPGAPLPTFCWEQIRAHDQPGDK 37
           GG GEPGP   P  PG         Q+    QPGDK
Sbjct: 353 GGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDK 388


>gi|22027583 alpha 1 type XIII collagen isoform 7 [Homo sapiens]
          Length = 703

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 16/36 (44%), Positives = 17/36 (47%)

Query: 2   GGVGEPGPREGPAQPGAPLPTFCWEQIRAHDQPGDK 37
           GG GEPGP   P  PG         Q+    QPGDK
Sbjct: 382 GGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDK 417


>gi|22027580 alpha 1 type XIII collagen isoform 6 [Homo sapiens]
          Length = 702

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 16/36 (44%), Positives = 17/36 (47%)

Query: 2   GGVGEPGPREGPAQPGAPLPTFCWEQIRAHDQPGDK 37
           GG GEPGP   P  PG         Q+    QPGDK
Sbjct: 382 GGRGEPGPPGLPGPPGPKGEAGVDGQVGPPGQPGDK 417


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.326    0.140    0.472 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,360,877
Number of Sequences: 37866
Number of extensions: 921294
Number of successful extensions: 4240
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 4101
Number of HSP's gapped (non-prelim): 157
length of query: 445
length of database: 18,247,518
effective HSP length: 105
effective length of query: 340
effective length of database: 14,271,588
effective search space: 4852339920
effective search space used: 4852339920
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.