Guide to the Human Genome
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Name: FADS3 Sequence: fasta or formatted (445aa) NCBI GI: 13375616
Description:

fatty acid desaturase 3

Referenced in:

Fatty Acid Synthesis

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.8         39           2
 C cysteine            1.1          5           1
 D aspartate           4.0         18           1
 E glutamate           4.7         21           2
 F phenylalanine       7.4         33           2
 G glycine             6.3         28           2
 H histidine           5.8         26           2
 I isoleucine          4.0         18           1
 K lysine              4.3         19           3
 L leucine            12.1         54           2
 M methionine          1.8          8           1
 N asparagine          2.9         13           1
 P proline             6.5         29           2
 Q glutamine           4.9         22           2
 R arginine            4.5         20           2
 S serine              5.4         24           2
 T threonine           2.0          9           1
 V valine              6.5         29           1
 W tryptophan          3.8         17           2
 Y tyrosine            2.9         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   fatty acid desaturase 3 
FADS2                 0.637   fatty acid desaturase 2 
FADS1                 0.514   fatty acid desaturase 1 
CYB5A                 0.031   cytochrome b-5 isoform 2 
CYB5A                 0.031   cytochrome b-5 isoform 1 
CYB5B                 0.024   cytochrome b5 outer mitochondrial membrane precursor...
CYB5R4                0.023   cytochrome b5 reductase 4 
FA2H                  0.019   fatty acid 2-hydroxylase 
FADS6                 0.014   fatty acid desaturase domain family, member 6 [Homo...
SUOX                  0.013   sulfite oxidase 
SUOX                  0.013   sulfite oxidase 
SUOX                  0.013   sulfite oxidase 
HERC2                 0.010   hect domain and RLD 2 
DEGS2                 0.008   degenerative spermatocyte homolog 2, lipid desatura...
CYB5D1                0.007   cytochrome b5 domain containing 1 
ABCC2                 0.005   ATP-binding cassette, sub-family C (CFTR/MRP), member...
COL13A1               0.005   alpha 1 type XIII collagen isoform 20 
COL13A1               0.005   alpha 1 type XIII collagen isoform 19 
COL13A1               0.005   alpha 1 type XIII collagen isoform 18 
COL13A1               0.005   alpha 1 type XIII collagen isoform 17 
COL13A1               0.005   alpha 1 type XIII collagen isoform 16 
COL13A1               0.005   alpha 1 type XIII collagen isoform 15 
COL13A1               0.005   alpha 1 type XIII collagen isoform 14 
COL13A1               0.005   alpha 1 type XIII collagen isoform 13 
COL13A1               0.005   alpha 1 type XIII collagen isoform 12 
COL13A1               0.005   alpha 1 type XIII collagen isoform 11 
COL13A1               0.005   alpha 1 type XIII collagen isoform 10 
COL13A1               0.005   alpha 1 type XIII collagen isoform 9 
COL13A1               0.005   alpha 1 type XIII collagen isoform 7 
COL13A1               0.005   alpha 1 type XIII collagen isoform 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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