Guide to the Human Genome
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Search of human proteins with 47679099

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|47679099 Kazal type serine protease inhibitor 5-like 2 [Homo
sapiens]
         (97 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|47679099 Kazal type serine protease inhibitor 5-like 2 [Homo ...   217   2e-57
gi|14211875 esophagus cancer-related gene-2 [Homo sapiens]             68   2e-12
gi|92110017 serine PI Kazal type 5-like 3 [Homo sapiens]               50   5e-07
gi|189163504 serine peptidase inhibitor, Kazal type 5 isoform c ...    47   4e-06
gi|74027261 serine peptidase inhibitor, Kazal type 5 isoform b p...    47   4e-06
gi|189163501 serine peptidase inhibitor, Kazal type 5 isoform a ...    47   4e-06
gi|94536774 serine peptidase inhibitor, Kazal type 9 [Homo sapiens]    47   4e-06
gi|45505132 serine protease inhibitor, Kazal type 1 precursor [H...    45   2e-05
gi|10863911 serine protease inhibitor, Kazal type 2 (acrosin-try...    42   1e-04
gi|7657453 serine peptidase inhibitor, Kazal type 4 [Homo sapiens]     42   1e-04
gi|68299793 serine protease inhibitor, Kazal type 6 [Homo sapiens]     39   0.001
gi|122937482 serine peptidase inhibitor, Kazal type 8 (putative)...    39   0.001
gi|54873613 agrin [Homo sapiens]                                       38   0.002
gi|225543525 solute carrier organic anion transporter family, me...    36   0.008
gi|225637477 solute carrier organic anion transporter family, me...    36   0.008
gi|225637475 solute carrier organic anion transporter family, me...    36   0.008
gi|225637473 solute carrier organic anion transporter family, me...    36   0.008
gi|116812593 liver-specific organic anion transporter 3TM12 [Hom...    35   0.013
gi|9790233 solute carrier organic anion transporter family, memb...    34   0.029
gi|12383051 transmembrane protein with EGF-like and two follista...    33   0.049
gi|5901956 follistatin-like 1 precursor [Homo sapiens]                 32   0.14 
gi|29568105 transmembrane protein with EGF-like and two follista...    31   0.24 
gi|225543118 solute carrier organic anion transporter family, me...    29   0.71 
gi|225543116 solute carrier organic anion transporter family, me...    29   0.71 
gi|225543114 solute carrier organic anion transporter family, me...    29   0.71 
gi|8394291 solute carrier organic anion transporter family, memb...    29   0.71 
gi|5453652 follistatin isoform FST317 precursor [Homo sapiens]         28   1.2  
gi|7242222 follistatin isoform FST344 precursor [Homo sapiens]         28   1.2  
gi|40786408 SFT2 domain containing 2 [Homo sapiens]                    28   1.2  
gi|11863156 RECK protein precursor [Homo sapiens]                      28   1.6  

>gi|47679099 Kazal type serine protease inhibitor 5-like 2 [Homo
          sapiens]
          Length = 97

 Score =  217 bits (552), Expect = 2e-57
 Identities = 97/97 (100%), Positives = 97/97 (100%)

Query: 1  MAKSFPVFSLLSFILIHLVLSSVSGPRHWWPPRGIIKVKCPYEKVNLSWYNGTVNPCPGL 60
          MAKSFPVFSLLSFILIHLVLSSVSGPRHWWPPRGIIKVKCPYEKVNLSWYNGTVNPCPGL
Sbjct: 1  MAKSFPVFSLLSFILIHLVLSSVSGPRHWWPPRGIIKVKCPYEKVNLSWYNGTVNPCPGL 60

Query: 61 YQPICGTNFITYDNPCILCVESLKSHGRIRFYHDGKC 97
          YQPICGTNFITYDNPCILCVESLKSHGRIRFYHDGKC
Sbjct: 61 YQPICGTNFITYDNPCILCVESLKSHGRIRFYHDGKC 97


>gi|14211875 esophagus cancer-related gene-2 [Homo sapiens]
          Length = 85

 Score = 67.8 bits (164), Expect = 2e-12
 Identities = 26/42 (61%), Positives = 33/42 (78%)

Query: 56 PCPGLYQPICGTNFITYDNPCILCVESLKSHGRIRFYHDGKC 97
          PCP  Y P+CG+++ITY N C LC ESLKS+GR++F HDG C
Sbjct: 44 PCPITYLPVCGSDYITYGNECHLCTESLKSNGRVQFLHDGSC 85


>gi|92110017 serine PI Kazal type 5-like 3 [Homo sapiens]
          Length = 94

 Score = 49.7 bits (117), Expect = 5e-07
 Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 12/94 (12%)

Query: 7  VFSLLSFILIHLVLSSVSGPRHW--WP-PRGIIKVKCPYEKVNLSWYNGTVNPCPGLYQP 63
          +F L+   L H+  S +   R +  WP PR   K+  P +      YN     CP +  P
Sbjct: 9  IFFLVCSTLTHVAFSGIFNKRDFTRWPKPR--CKMYIPLDPD----YNAD---CPNVTAP 59

Query: 64 ICGTNFITYDNPCILCVESLKSHGRIRFYHDGKC 97
          +C +N  T+ N C  CVE  + H RI+F   GKC
Sbjct: 60 VCASNGHTFQNECFFCVEQREFHYRIKFEKYGKC 93


>gi|189163504 serine peptidase inhibitor, Kazal type 5 isoform c
           precursor [Homo sapiens]
          Length = 916

 Score = 46.6 bits (109), Expect = 4e-06
 Identities = 18/41 (43%), Positives = 26/41 (63%)

Query: 57  CPGLYQPICGTNFITYDNPCILCVESLKSHGRIRFYHDGKC 97
           CP  Y+ +CGT+  TYDN C LC E+ K+  +I    +G+C
Sbjct: 111 CPDYYEAVCGTDGKTYDNRCALCAENAKTGSQIGVKSEGEC 151


>gi|74027261 serine peptidase inhibitor, Kazal type 5 isoform b
           precursor [Homo sapiens]
          Length = 1064

 Score = 46.6 bits (109), Expect = 4e-06
 Identities = 18/41 (43%), Positives = 26/41 (63%)

Query: 57  CPGLYQPICGTNFITYDNPCILCVESLKSHGRIRFYHDGKC 97
           CP  Y+ +CGT+  TYDN C LC E+ K+  +I    +G+C
Sbjct: 111 CPDYYEAVCGTDGKTYDNRCALCAENAKTGSQIGVKSEGEC 151



 Score = 40.8 bits (94), Expect = 2e-04
 Identities = 17/41 (41%), Positives = 23/41 (56%)

Query: 57   CPGLYQPICGTNFITYDNPCILCVESLKSHGRIRFYHDGKC 97
            CP   +P+CG +  TY+NPC+LC E+L           GKC
Sbjct: 1006 CPKDLKPVCGDDGQTYNNPCMLCHENLIRQTNTHIRSTGKC 1046


>gi|189163501 serine peptidase inhibitor, Kazal type 5 isoform a
           precursor [Homo sapiens]
          Length = 1094

 Score = 46.6 bits (109), Expect = 4e-06
 Identities = 18/41 (43%), Positives = 26/41 (63%)

Query: 57  CPGLYQPICGTNFITYDNPCILCVESLKSHGRIRFYHDGKC 97
           CP  Y+ +CGT+  TYDN C LC E+ K+  +I    +G+C
Sbjct: 111 CPDYYEAVCGTDGKTYDNRCALCAENAKTGSQIGVKSEGEC 151



 Score = 40.8 bits (94), Expect = 2e-04
 Identities = 17/41 (41%), Positives = 23/41 (56%)

Query: 57   CPGLYQPICGTNFITYDNPCILCVESLKSHGRIRFYHDGKC 97
            CP   +P+CG +  TY+NPC+LC E+L           GKC
Sbjct: 1036 CPKDLKPVCGDDGQTYNNPCMLCHENLIRQTNTHIRSTGKC 1076


>gi|94536774 serine peptidase inhibitor, Kazal type 9 [Homo
          sapiens]
          Length = 86

 Score = 46.6 bits (109), Expect = 4e-06
 Identities = 18/41 (43%), Positives = 25/41 (60%)

Query: 57 CPGLYQPICGTNFITYDNPCILCVESLKSHGRIRFYHDGKC 97
          C  +Y PICG++  TY N C  C +  K+ G ++F H GKC
Sbjct: 46 CHHMYDPICGSDGKTYKNDCFFCSKVKKTDGTLKFVHFGKC 86


>gi|45505132 serine protease inhibitor, Kazal type 1 precursor
          [Homo sapiens]
          Length = 79

 Score = 44.7 bits (104), Expect = 2e-05
 Identities = 18/44 (40%), Positives = 24/44 (54%)

Query: 54 VNPCPGLYQPICGTNFITYDNPCILCVESLKSHGRIRFYHDGKC 97
          +N C  +Y P+CGT+  TY N C+LC E+ K    I     G C
Sbjct: 36 LNGCTKIYDPVCGTDGNTYPNECVLCFENRKRQTSILIQKSGPC 79


>gi|10863911 serine protease inhibitor, Kazal type 2
          (acrosin-trypsin inhibitor) [Homo sapiens]
          Length = 84

 Score = 42.0 bits (97), Expect = 1e-04
 Identities = 25/87 (28%), Positives = 41/87 (47%), Gaps = 5/87 (5%)

Query: 11 LSFILIHLVLSSVSGPRHWWPPRGIIKVKCPYEKVNLSWYNGTVNPCPGLYQPICGTNFI 70
          LS + + L+L +V+      P  G+      Y   N S Y   +  CP  + P+CG++  
Sbjct: 3  LSVLRLALLLLAVTFAASLIPQFGLFS---KYRTPNCSQYR--LPGCPRHFNPVCGSDMS 57

Query: 71 TYDNPCILCVESLKSHGRIRFYHDGKC 97
          TY N C LC++  +    I+   +G C
Sbjct: 58 TYANECTLCMKIREGGHNIKIIRNGPC 84


>gi|7657453 serine peptidase inhibitor, Kazal type 4 [Homo
          sapiens]
          Length = 86

 Score = 41.6 bits (96), Expect = 1e-04
 Identities = 18/59 (30%), Positives = 31/59 (52%)

Query: 39 KCPYEKVNLSWYNGTVNPCPGLYQPICGTNFITYDNPCILCVESLKSHGRIRFYHDGKC 97
          K P+ ++ +  +      C  +   +CGT+ +TY N C LC+  +K+   I+   DGKC
Sbjct: 28 KLPFSRMPICEHMVESPTCSQMSNLVCGTDGLTYTNECQLCLARIKTKQDIQIMKDGKC 86


>gi|68299793 serine protease inhibitor, Kazal type 6 [Homo
          sapiens]
          Length = 80

 Score = 38.5 bits (88), Expect = 0.001
 Identities = 17/41 (41%), Positives = 21/41 (51%)

Query: 57 CPGLYQPICGTNFITYDNPCILCVESLKSHGRIRFYHDGKC 97
          C     P CG++  TY N C  C   +KS G+I   H GKC
Sbjct: 40 CTRESNPHCGSDGQTYGNKCAFCKAIVKSGGKISLKHPGKC 80


>gi|122937482 serine peptidase inhibitor, Kazal type 8 (putative)
          [Homo sapiens]
          Length = 97

 Score = 38.5 bits (88), Expect = 0.001
 Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 5/60 (8%)

Query: 38 VKCPYEKVNLSWYNGTVNPCPGLYQPICGTNFITYDNPCILCVESLKSHGRIRFYHDGKC 97
          V+C  + VN  W+   + P     +PICG++ +TY + C LC + L     I   +DG+C
Sbjct: 40 VEC-LKNVNKCWFLSYIKPS----EPICGSDQVTYSSDCHLCSKILFEGLNITKLYDGQC 94


>gi|54873613 agrin [Homo sapiens]
          Length = 2045

 Score = 38.1 bits (87), Expect = 0.002
 Identities = 16/43 (37%), Positives = 21/43 (48%)

Query: 55  NPCPGLYQPICGTNFITYDNPCILCVESLKSHGRIRFYHDGKC 97
           +PCP +  P+CG++  TY N C L         RIR    G C
Sbjct: 200 SPCPSVVAPVCGSDASTYSNECELQRAQCSQQRRIRLLSRGPC 242



 Score = 31.6 bits (70), Expect = 0.14
 Identities = 9/22 (40%), Positives = 15/22 (68%)

Query: 57  CPGLYQPICGTNFITYDNPCIL 78
           CP    P+CG + +TY+N C++
Sbjct: 349 CPARQAPVCGDDGVTYENDCVM 370



 Score = 31.6 bits (70), Expect = 0.14
 Identities = 13/41 (31%), Positives = 20/41 (48%)

Query: 57  CPGLYQPICGTNFITYDNPCILCVESLKSHGRIRFYHDGKC 97
           C  LY P+CG++ +TY + C L   +      I+    G C
Sbjct: 494 CSSLYDPVCGSDGVTYGSACELEATACTLGREIQVARKGPC 534



 Score = 30.8 bits (68), Expect = 0.24
 Identities = 13/41 (31%), Positives = 18/41 (43%)

Query: 57  CPGLYQPICGTNFITYDNPCILCVESLKSHGRIRFYHDGKC 97
           C G Y+P+C  +  TYD+ C       +    I   H G C
Sbjct: 421 CDGAYRPVCAQDGRTYDSDCWRQQAECRQQRAIPSKHQGPC 461



 Score = 29.3 bits (64), Expect = 0.71
 Identities = 13/41 (31%), Positives = 20/41 (48%)

Query: 57  CPGLYQPICGTNFITYDNPCILCVESLKSHGRIRFYHDGKC 97
           C  L QP+CG++  TY + C+L V +      +     G C
Sbjct: 559 CVALAQPVCGSDGHTYPSECMLHVHACTHQISLHVASAGPC 599


>gi|225543525 solute carrier organic anion transporter family,
           member 1B1 [Homo sapiens]
          Length = 691

 Score = 35.8 bits (81), Expect = 0.008
 Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 1/53 (1%)

Query: 42  YEKVNLSWYNGTVNPCPGLYQPICGTNFITYDNPCIL-CVESLKSHGRIRFYH 93
           +  V LS+ N   N     ++P+CG N ITY +PC+  C  S  +   I FY+
Sbjct: 451 HRDVPLSYCNSDCNCDESQWEPVCGNNGITYISPCLAGCKSSSGNKKPIVFYN 503


>gi|225637477 solute carrier organic anion transporter family,
           member 5A1 isoform 2 [Homo sapiens]
          Length = 687

 Score = 35.8 bits (81), Expect = 0.008
 Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 1/38 (2%)

Query: 61  YQPICGTNFITYDNPCIL-CVESLKSHGRIRFYHDGKC 97
           Y+P+CG++ ITY NPC+  CV S      IR Y +  C
Sbjct: 566 YEPVCGSDGITYFNPCLAGCVNSGNLSTGIRNYTECTC 603


>gi|225637475 solute carrier organic anion transporter family,
           member 5A1 isoform 3 [Homo sapiens]
          Length = 793

 Score = 35.8 bits (81), Expect = 0.008
 Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 1/38 (2%)

Query: 61  YQPICGTNFITYDNPCIL-CVESLKSHGRIRFYHDGKC 97
           Y+P+CG++ ITY NPC+  CV S      IR Y +  C
Sbjct: 511 YEPVCGSDGITYFNPCLAGCVNSGNLSTGIRNYTECTC 548


>gi|225637473 solute carrier organic anion transporter family,
           member 5A1 isoform 1 [Homo sapiens]
          Length = 848

 Score = 35.8 bits (81), Expect = 0.008
 Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 1/38 (2%)

Query: 61  YQPICGTNFITYDNPCIL-CVESLKSHGRIRFYHDGKC 97
           Y+P+CG++ ITY NPC+  CV S      IR Y +  C
Sbjct: 566 YEPVCGSDGITYFNPCLAGCVNSGNLSTGIRNYTECTC 603


>gi|116812593 liver-specific organic anion transporter 3TM12 [Homo
           sapiens]
          Length = 640

 Score = 35.0 bits (79), Expect = 0.013
 Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 1/50 (2%)

Query: 45  VNLSWYNGTVNPCPGLYQPICGTNFITYDNPCIL-CVESLKSHGRIRFYH 93
           V LS+ N   N     ++P+CG N ITY +PC+  C  S  +   I FY+
Sbjct: 407 VPLSYCNSECNCDESQWEPVCGNNGITYLSPCLAGCKSSSGNKEPIVFYN 456


>gi|9790233 solute carrier organic anion transporter family, member
           1B3 [Homo sapiens]
          Length = 702

 Score = 33.9 bits (76), Expect = 0.029
 Identities = 16/53 (30%), Positives = 27/53 (50%)

Query: 45  VNLSWYNGTVNPCPGLYQPICGTNFITYDNPCILCVESLKSHGRIRFYHDGKC 97
           V LS+ N   N     ++P+CG N ITY +PC+   +S     +   +++  C
Sbjct: 454 VPLSYCNSECNCDESQWEPVCGNNGITYLSPCLAGCKSSSGIKKHTVFYNCSC 506


>gi|12383051 transmembrane protein with EGF-like and two
           follistatin-like domains 2 [Homo sapiens]
          Length = 374

 Score = 33.1 bits (74), Expect = 0.049
 Identities = 14/41 (34%), Positives = 19/41 (46%)

Query: 57  CPGLYQPICGTNFITYDNPCILCVESLKSHGRIRFYHDGKC 97
           C   Y P+CG+N  +Y N C L   + K    I    +G C
Sbjct: 95  CNNDYVPVCGSNGESYQNECYLRQAACKQQSEILVVSEGSC 135



 Score = 26.2 bits (56), Expect = 6.0
 Identities = 10/37 (27%), Positives = 19/37 (51%)

Query: 61  YQPICGTNFITYDNPCILCVESLKSHGRIRFYHDGKC 97
           + P+C ++  +YDN C +   S +   +I     G+C
Sbjct: 191 FNPLCASDGKSYDNACQIKEASCQKQEKIEVMSLGRC 227


>gi|5901956 follistatin-like 1 precursor [Homo sapiens]
          Length = 308

 Score = 31.6 bits (70), Expect = 0.14
 Identities = 14/44 (31%), Positives = 24/44 (54%)

Query: 54 VNPCPGLYQPICGTNFITYDNPCILCVESLKSHGRIRFYHDGKC 97
          +  C    +P+CG+N  TY N C L  ++  +  +I+  +DG C
Sbjct: 55 IEQCKPHKRPVCGSNGKTYLNHCELHRDACLTGSKIQVDYDGHC 98


>gi|29568105 transmembrane protein with EGF-like and two
           follistatin-like domains 1 [Homo sapiens]
          Length = 380

 Score = 30.8 bits (68), Expect = 0.24
 Identities = 15/41 (36%), Positives = 18/41 (43%)

Query: 57  CPGLYQPICGTNFITYDNPCILCVESLKSHGRIRFYHDGKC 97
           C   Y P+CG+N  TY N C L   + K    I     G C
Sbjct: 103 CHTNYIPVCGSNGDTYQNECFLRRAACKHQKEITVIARGPC 143



 Score = 28.9 bits (63), Expect = 0.92
 Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 1/42 (2%)

Query: 57  CPGL-YQPICGTNFITYDNPCILCVESLKSHGRIRFYHDGKC 97
           C G  + P+C ++  +Y+NPC +   S     +I   H G C
Sbjct: 194 CSGYSFNPVCASDGSSYNNPCFVREASCIKQEQIDIRHLGHC 235


>gi|225543118 solute carrier organic anion transporter family,
           member 1C1 isoform 1 [Homo sapiens]
          Length = 730

 Score = 29.3 bits (64), Expect = 0.71
 Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)

Query: 61  YQPICGTNFITYDNPCIL-CVESLKSHGRIRFYH 93
           ++P+CG N ITY + C+  C  S +S   I FY+
Sbjct: 487 WEPMCGENGITYVSACLAGCQTSNRSGKNIIFYN 520


>gi|225543116 solute carrier organic anion transporter family,
           member 1C1 isoform 3 [Homo sapiens]
          Length = 663

 Score = 29.3 bits (64), Expect = 0.71
 Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)

Query: 61  YQPICGTNFITYDNPCIL-CVESLKSHGRIRFYH 93
           ++P+CG N ITY + C+  C  S +S   I FY+
Sbjct: 438 WEPMCGENGITYVSACLAGCQTSNRSGKNIIFYN 471


>gi|225543114 solute carrier organic anion transporter family,
           member 1C1 isoform 4 [Homo sapiens]
          Length = 612

 Score = 29.3 bits (64), Expect = 0.71
 Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)

Query: 61  YQPICGTNFITYDNPCIL-CVESLKSHGRIRFYH 93
           ++P+CG N ITY + C+  C  S +S   I FY+
Sbjct: 369 WEPMCGENGITYVSACLAGCQTSNRSGKNIIFYN 402


>gi|8394291 solute carrier organic anion transporter family, member
           1C1 isoform 2 [Homo sapiens]
          Length = 712

 Score = 29.3 bits (64), Expect = 0.71
 Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)

Query: 61  YQPICGTNFITYDNPCIL-CVESLKSHGRIRFYH 93
           ++P+CG N ITY + C+  C  S +S   I FY+
Sbjct: 487 WEPMCGENGITYVSACLAGCQTSNRSGKNIIFYN 520


>gi|5453652 follistatin isoform FST317 precursor [Homo sapiens]
          Length = 317

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 11/35 (31%), Positives = 16/35 (45%)

Query: 63  PICGTNFITYDNPCILCVESLKSHGRIRFYHDGKC 97
           P+CG +  TY N C L     K    +   + G+C
Sbjct: 130 PVCGLDGKTYRNECALLKARCKEQPELEVQYQGRC 164


>gi|7242222 follistatin isoform FST344 precursor [Homo sapiens]
          Length = 344

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 11/35 (31%), Positives = 16/35 (45%)

Query: 63  PICGTNFITYDNPCILCVESLKSHGRIRFYHDGKC 97
           P+CG +  TY N C L     K    +   + G+C
Sbjct: 130 PVCGLDGKTYRNECALLKARCKEQPELEVQYQGRC 164


>gi|40786408 SFT2 domain containing 2 [Homo sapiens]
          Length = 160

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 11/51 (21%), Positives = 25/51 (49%)

Query: 1   MAKSFPVFSLLSFILIHLVLSSVSGPRHWWPPRGIIKVKCPYEKVNLSWYN 51
           + + F    L++ I++ L  +       WW  +G+  + C  + + L+WY+
Sbjct: 90  LKRMFEPTRLIATIMVLLCFALTLCSAFWWHNKGLALIFCILQSLALTWYS 140


>gi|11863156 RECK protein precursor [Homo sapiens]
          Length = 971

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 12/37 (32%), Positives = 17/37 (45%)

Query: 50  YNGTVNPCPGLYQPICGTNFITYDNPCILCVESLKSH 86
           + G    C   + P+CG N  TY + CI     L+ H
Sbjct: 628 FTGLPCNCADQFVPVCGQNGRTYPSACIARCVGLQDH 664


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.327    0.144    0.512 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,406,494
Number of Sequences: 37866
Number of extensions: 195675
Number of successful extensions: 525
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 456
Number of HSP's gapped (non-prelim): 74
length of query: 97
length of database: 18,247,518
effective HSP length: 68
effective length of query: 29
effective length of database: 15,672,630
effective search space: 454506270
effective search space used: 454506270
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
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