BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|4759188 syntaxin 8 [Homo sapiens] (236 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|4759188 syntaxin 8 [Homo sapiens] 459 e-130 gi|5032131 syntaxin 6 [Homo sapiens] 57 1e-08 gi|4507285 syntaxin 10 [Homo sapiens] 52 4e-07 gi|170932494 syntaxin 7 [Homo sapiens] 47 2e-05 gi|219555661 intraflagellar transport 81-like isoform 1 [Homo sa... 42 5e-04 gi|32526901 intraflagellar transport 81-like isoform 1 [Homo sap... 42 5e-04 gi|148746195 trichohyalin [Homo sapiens] 39 0.005 gi|153791839 sodium channel associated protein 1 [Homo sapiens] 39 0.005 gi|205277396 dynactin 1 isoform 4 [Homo sapiens] 38 0.007 gi|205277392 dynactin 1 isoform 3 [Homo sapiens] 38 0.007 gi|13259508 dynactin 1 isoform 2 [Homo sapiens] 38 0.007 gi|13259510 dynactin 1 isoform 1 [Homo sapiens] 38 0.007 gi|4759154 synaptosomal-associated protein 29 [Homo sapiens] 38 0.007 gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo sa... 37 0.015 gi|18765735 synaptosomal-associated protein 25 isoform SNAP25B [... 37 0.015 gi|18765733 synaptosomal-associated protein 25 isoform SNAP25A [... 37 0.015 gi|5729858 nuclear receptor coactivator 2 [Homo sapiens] 36 0.025 gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo sap... 36 0.025 gi|116256481 TNFAIP3 interacting protein 1 [Homo sapiens] 35 0.073 gi|239745079 PREDICTED: Putative golgin subfamily A member 6-lik... 35 0.073 gi|47778943 syntaxin 16 isoform a [Homo sapiens] 35 0.073 gi|198041692 syntaxin 16 isoform d [Homo sapiens] 35 0.073 gi|198041688 syntaxin 16 isoform c [Homo sapiens] 35 0.073 gi|34447229 syntaxin 16 isoform b [Homo sapiens] 35 0.073 gi|94538359 golgi autoantigen, golgin subfamily a, 6B [Homo sapi... 35 0.073 gi|5454166 vesicle transport through interaction with t-SNAREs 1... 34 0.13 gi|223634475 golgi autoantigen, golgin subfamily a, 6D [Homo sap... 33 0.16 gi|51472437 PREDICTED: golgi autoantigen, golgin subfamily a, 6C... 33 0.16 gi|146133848 golgi autoantigen, golgin subfamily a, 6 [Homo sapi... 33 0.16 gi|21735548 centrosomal protein 2 [Homo sapiens] 33 0.21 >gi|4759188 syntaxin 8 [Homo sapiens] Length = 236 Score = 459 bits (1181), Expect = e-130 Identities = 236/236 (100%), Positives = 236/236 (100%) Query: 1 MAPDPWFSTYDSTCQIAQEIAEKIQQRNQYERKGEKAPKLTVTIRALLQNLKEKIALLKD 60 MAPDPWFSTYDSTCQIAQEIAEKIQQRNQYERKGEKAPKLTVTIRALLQNLKEKIALLKD Sbjct: 1 MAPDPWFSTYDSTCQIAQEIAEKIQQRNQYERKGEKAPKLTVTIRALLQNLKEKIALLKD 60 Query: 61 LLLRAVSTHQITQLEGDRRQNLLDDLVTRERLLLASFKNEGAEPDLIRSSLMSEEAKRGA 120 LLLRAVSTHQITQLEGDRRQNLLDDLVTRERLLLASFKNEGAEPDLIRSSLMSEEAKRGA Sbjct: 61 LLLRAVSTHQITQLEGDRRQNLLDDLVTRERLLLASFKNEGAEPDLIRSSLMSEEAKRGA 120 Query: 121 PNPWLFEEPEETRGLGFDEIRQQQQKIIQEQDAGLDALSSIISRQKQMGQEIGNELDEQN 180 PNPWLFEEPEETRGLGFDEIRQQQQKIIQEQDAGLDALSSIISRQKQMGQEIGNELDEQN Sbjct: 121 PNPWLFEEPEETRGLGFDEIRQQQQKIIQEQDAGLDALSSIISRQKQMGQEIGNELDEQN 180 Query: 181 EIIDDLANLVENTDEKLRNETRRVNMVDRKSASCGMIMVILLLLVAIVVVAVWPTN 236 EIIDDLANLVENTDEKLRNETRRVNMVDRKSASCGMIMVILLLLVAIVVVAVWPTN Sbjct: 181 EIIDDLANLVENTDEKLRNETRRVNMVDRKSASCGMIMVILLLLVAIVVVAVWPTN 236 >gi|5032131 syntaxin 6 [Homo sapiens] Length = 255 Score = 57.4 bits (137), Expect = 1e-08 Identities = 30/99 (30%), Positives = 58/99 (58%), Gaps = 4/99 (4%) Query: 138 DEIRQQQQKIIQEQDAGLDALSSIISRQKQMGQEIGNELDEQNEIIDDLANLVENTDEKL 197 +E + QQQ I+++QD L+ +S I K M Q IG EL+EQ +++D ++ +E+T +L Sbjct: 156 EEQQAQQQLIVEQQDEQLELVSGSIGVLKNMSQRIGGELEEQAVMLEDFSHELESTQSRL 215 Query: 198 RNETRRVNMVDRKSAS----CGMIMVILLLLVAIVVVAV 232 N +++ V ++ C + ++ +LLV +++ V Sbjct: 216 DNVMKKLAKVSHMTSDRRQWCAIAILFAVLLVVLILFLV 254 >gi|4507285 syntaxin 10 [Homo sapiens] Length = 249 Score = 52.0 bits (123), Expect = 4e-07 Identities = 56/239 (23%), Positives = 103/239 (43%), Gaps = 30/239 (12%) Query: 10 YDSTCQIAQEIA----EKIQQRNQYERKGEKAPKLTVTIRALLQNLKEKIALLKDLLLRA 65 Y C++ QE A E++ R G ++ I L++L+E I +++ Sbjct: 25 YQRWCELLQESAAVGREELDWTTNELRNGLRS------IEWDLEDLEETIGIVE------ 72 Query: 66 VSTHQITQLEGDRRQNLLDDLVTRERLLLASFKNEGAEPDLI-------RSSLMSEEAKR 118 + + GD ++ + V R R + K+ P + R L + A + Sbjct: 73 ANPGKFKLPAGDLQERKV--FVERMREAVQEMKDHMVSPTAVAFLERNNREILAGKPAAQ 130 Query: 119 GAPNPWLFEEPEETRGLGFDEIRQQQQKIIQEQDAGLDALSSIISRQKQMGQEIGNELDE 178 +P+ L +E + QQ I+ EQD L+ +S I K M +G ELDE Sbjct: 131 KSPSDLLDASAVSATSRYIEEQQATQQLIMDEQDQQLEMVSGSIQVLKHMSGRVGEELDE 190 Query: 179 QNEIIDDLANLVENTDEKLRNETRRVNMV-----DRKSASCGMIMVILLLLVAIVVVAV 232 Q ++D A +++T ++ R++ V DR+ ++V +LLLV I++ ++ Sbjct: 191 QGIMLDAFAQEMDHTQSRMDGVLRKLAKVSHMTSDRRQWCAIAVLVGVLLLVLILLFSL 249 >gi|170932494 syntaxin 7 [Homo sapiens] Length = 261 Score = 46.6 bits (109), Expect = 2e-05 Identities = 45/226 (19%), Positives = 105/226 (46%), Gaps = 16/226 (7%) Query: 15 QIAQEIAEKIQQRNQYERKGEKAPKLTVTIRALLQNLKEKIALLKDLLLRAVSTHQITQL 74 ++ Q++ +K Q NQ ++ +K K ++ +++ + KD L+ +T +T Sbjct: 47 ELRQQLQQKQQYTNQLAKETDKYIKEFGSLPTTPSEQRQR-KIQKDRLVAEFTT-SLTNF 104 Query: 75 EGDRRQNLLDDLVTRERLLLASFKNEGAEPDLIRSSLMSEEAKRGAPNPWLFEEPEETRG 134 + +RQ RE+ +A + + S + +K W + + + Sbjct: 105 QKVQRQ-----AAEREKEFVARVRASSR----VSGSFPEDSSKERNLVSWESQTQPQVQ- 154 Query: 135 LGFDEIRQQQQKIIQEQDAGLDALSSIISRQKQMGQEIGNELDEQNEIIDDLANLVENTD 194 + +EI + ++I E+++ + L + I ++ +++G + EQ ++ID + VEN + Sbjct: 155 VQDEEITEDDLRLIHERESSIRQLEADIMDINEIFKDLGMMIHEQGDVIDSIEANVENAE 214 Query: 195 ---EKLRNETRRVNMVDRKSASCGMIMVILLLL-VAIVVVAVWPTN 236 ++ + R RKS I++++L++ VAI+ + +W N Sbjct: 215 VHVQQANQQLSRAADYQRKSRKTLCIIILILVIGVAIISLIIWGLN 260 >gi|219555661 intraflagellar transport 81-like isoform 1 [Homo sapiens] Length = 676 Score = 42.0 bits (97), Expect = 5e-04 Identities = 43/201 (21%), Positives = 83/201 (41%), Gaps = 21/201 (10%) Query: 11 DSTCQIAQEIAEKIQQRNQYER----KGEKAPKLTVTIRALLQNLKEKIALLKDLLLRAV 66 + + +E + K Q +++ KG++ + +R+ K+K ++ +L Sbjct: 367 EKLASLEREASVKRNQTREFDGTEVLKGDEFKRYVNKLRSKSTVFKKKHQIIAELKAEFG 426 Query: 67 STHQITQLEGDRRQNLLDDLVTRERLLLASFKNEGAEPDLIRSSLMSEEAKRGAPNPWLF 126 + +L R +N+ L T E + + S EE +R + L Sbjct: 427 LLQRTEELLKQRHENIQQQLQTMEE-----------KKGISGYSYTQEELERVSA---LK 472 Query: 127 EEPEETRGLGFDEIRQQQQKIIQEQDAGLDALSSIISRQKQMGQ---EIGNELDEQNEII 183 E +E +G D++ + +K+ AL+S+I +Q+ Q E+ E DE+ Sbjct: 473 SEVDEMKGRTLDDMSEMVKKLYSLVSEKKSALASVIKELRQLRQKYQELTQECDEKKSQY 532 Query: 184 DDLANLVENTDEKLRNETRRV 204 D A +E+ KL E RR+ Sbjct: 533 DSCAAGLESNRSKLEQEVRRL 553 >gi|32526901 intraflagellar transport 81-like isoform 1 [Homo sapiens] Length = 676 Score = 42.0 bits (97), Expect = 5e-04 Identities = 43/201 (21%), Positives = 83/201 (41%), Gaps = 21/201 (10%) Query: 11 DSTCQIAQEIAEKIQQRNQYER----KGEKAPKLTVTIRALLQNLKEKIALLKDLLLRAV 66 + + +E + K Q +++ KG++ + +R+ K+K ++ +L Sbjct: 367 EKLASLEREASVKRNQTREFDGTEVLKGDEFKRYVNKLRSKSTVFKKKHQIIAELKAEFG 426 Query: 67 STHQITQLEGDRRQNLLDDLVTRERLLLASFKNEGAEPDLIRSSLMSEEAKRGAPNPWLF 126 + +L R +N+ L T E + + S EE +R + L Sbjct: 427 LLQRTEELLKQRHENIQQQLQTMEE-----------KKGISGYSYTQEELERVSA---LK 472 Query: 127 EEPEETRGLGFDEIRQQQQKIIQEQDAGLDALSSIISRQKQMGQ---EIGNELDEQNEII 183 E +E +G D++ + +K+ AL+S+I +Q+ Q E+ E DE+ Sbjct: 473 SEVDEMKGRTLDDMSEMVKKLYSLVSEKKSALASVIKELRQLRQKYQELTQECDEKKSQY 532 Query: 184 DDLANLVENTDEKLRNETRRV 204 D A +E+ KL E RR+ Sbjct: 533 DSCAAGLESNRSKLEQEVRRL 553 >gi|148746195 trichohyalin [Homo sapiens] Length = 1943 Score = 38.5 bits (88), Expect = 0.005 Identities = 43/186 (23%), Positives = 80/186 (43%), Gaps = 23/186 (12%) Query: 15 QIAQEIAEKIQQRNQYERKGEKAPKLTVTIRALLQNLKEKIALLKDLLLRAVSTHQITQL 74 Q+ +E EK ++R ++ER+ K +L LL+ +EK L Sbjct: 1002 QLLREEREK-RRRQEWERQYRKKDELQQEEEQLLREEREKRRLQ---------------- 1044 Query: 75 EGDRRQNLLDDLVTRERLLLASFKNEGAEPDLIRSSLMSEEAKRGAPNPWLFEEPEETRG 134 E +R+ ++L E LL + +L R EE ++ L EEPE+ R Sbjct: 1045 ERERQYREEEELQQEEEQLLGEERETRRRQELERQYRKEEELQQ-EEEQLLREEPEKRRR 1103 Query: 135 LGFDEIRQQQQKIIQEQDAGLDALSSIISRQKQMGQEIGNELDEQNEIIDDLANLVENTD 194 + ++++++ QE++ L R+K+ QE+ + E+ E+ + L+ Sbjct: 1104 QERERQCREEEELQQEEEQLLRE-----EREKRRRQELERQYREEEEVQQEEEQLLREEP 1158 Query: 195 EKLRNE 200 EK R + Sbjct: 1159 EKRRRQ 1164 Score = 28.5 bits (62), Expect = 5.3 Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 11/93 (11%) Query: 111 LMSEEAKRGAPNPWLFEEPEETRGLGFDEIRQQQQKIIQEQDAGLDALSSIISRQKQMGQ 170 L EE +R L EE E+ R L E+R+++Q+ Q+Q + R++Q+ + Sbjct: 260 LQEEEPQRQRE---LQEEEEQLRKLERQELRRERQEEEQQQQR--------LRREQQLRR 308 Query: 171 EIGNELDEQNEIIDDLANLVENTDEKLRNETRR 203 + E EQ E + E +E+ + RR Sbjct: 309 KQEEERREQQEERREQQERREQQEERREQQLRR 341 >gi|153791839 sodium channel associated protein 1 [Homo sapiens] Length = 688 Score = 38.5 bits (88), Expect = 0.005 Identities = 19/81 (23%), Positives = 44/81 (54%) Query: 141 RQQQQKIIQEQDAGLDALSSIISRQKQMGQEIGNELDEQNEIIDDLANLVENTDEKLRNE 200 +++ +K+ + + ++ L S +SRQK QE+ ++L+ NE + + L+ EK Sbjct: 592 KEETKKLTESAEIRINNLKSELSRQKLHTQELLSQLEMANEKVAENEKLILEHQEKANRL 651 Query: 201 TRRVNMVDRKSASCGMIMVIL 221 RR++ + ++AS + ++ Sbjct: 652 QRRLSQAEERAASASQQLSVI 672 >gi|205277396 dynactin 1 isoform 4 [Homo sapiens] Length = 1139 Score = 38.1 bits (87), Expect = 0.007 Identities = 44/189 (23%), Positives = 85/189 (44%), Gaps = 15/189 (7%) Query: 15 QIAQEIAEKIQQRNQYERKGEKAPKLTVTIRALLQNLKEKIALLKDLLLRAVSTHQITQL 74 ++A+E AE +QQ + E E+ +LT + L ++EK + A S++Q+ QL Sbjct: 178 EMAEERAESLQQ--EVEALKERVDELTTDLEILKAEIEEKGSD------GAASSYQLKQL 229 Query: 75 EGDRRQNLLDDLVTRERLLLASFKNEGAEPDLIRSSLMSEEAKRGAPNPWLFEEPEETRG 134 E + L D + R R L +S K E + + E L EE + Sbjct: 230 EEQNAR--LKDALVRMRDLSSSEKQEHVKLQKLMEKKNQELEVVRQQRERLQEELSQAES 287 Query: 135 LGFDEIRQQQQKIIQEQDAG---LDALSSIISRQKQMGQEIGNELDEQNEIIDDLANLVE 191 DE+++Q + ++ D ++ + +++ + +G +L+ NE+ D+L Sbjct: 288 T-IDELKEQVDAALGAEEMVEMLTDRNLNLEEKVRELRETVG-DLEAMNEMNDELQENAR 345 Query: 192 NTDEKLRNE 200 T+ +LR + Sbjct: 346 ETELELREQ 354 >gi|205277392 dynactin 1 isoform 3 [Homo sapiens] Length = 1253 Score = 38.1 bits (87), Expect = 0.007 Identities = 44/189 (23%), Positives = 85/189 (44%), Gaps = 15/189 (7%) Query: 15 QIAQEIAEKIQQRNQYERKGEKAPKLTVTIRALLQNLKEKIALLKDLLLRAVSTHQITQL 74 ++A+E AE +QQ + E E+ +LT + L ++EK + A S++Q+ QL Sbjct: 292 EMAEERAESLQQ--EVEALKERVDELTTDLEILKAEIEEKGSD------GAASSYQLKQL 343 Query: 75 EGDRRQNLLDDLVTRERLLLASFKNEGAEPDLIRSSLMSEEAKRGAPNPWLFEEPEETRG 134 E + L D + R R L +S K E + + E L EE + Sbjct: 344 EEQNAR--LKDALVRMRDLSSSEKQEHVKLQKLMEKKNQELEVVRQQRERLQEELSQAES 401 Query: 135 LGFDEIRQQQQKIIQEQDAG---LDALSSIISRQKQMGQEIGNELDEQNEIIDDLANLVE 191 DE+++Q + ++ D ++ + +++ + +G +L+ NE+ D+L Sbjct: 402 T-IDELKEQVDAALGAEEMVEMLTDRNLNLEEKVRELRETVG-DLEAMNEMNDELQENAR 459 Query: 192 NTDEKLRNE 200 T+ +LR + Sbjct: 460 ETELELREQ 468 >gi|13259508 dynactin 1 isoform 2 [Homo sapiens] Length = 1144 Score = 38.1 bits (87), Expect = 0.007 Identities = 44/189 (23%), Positives = 85/189 (44%), Gaps = 15/189 (7%) Query: 15 QIAQEIAEKIQQRNQYERKGEKAPKLTVTIRALLQNLKEKIALLKDLLLRAVSTHQITQL 74 ++A+E AE +QQ + E E+ +LT + L ++EK + A S++Q+ QL Sbjct: 178 EMAEERAESLQQ--EVEALKERVDELTTDLEILKAEIEEKGSD------GAASSYQLKQL 229 Query: 75 EGDRRQNLLDDLVTRERLLLASFKNEGAEPDLIRSSLMSEEAKRGAPNPWLFEEPEETRG 134 E + L D + R R L +S K E + + E L EE + Sbjct: 230 EEQNAR--LKDALVRMRDLSSSEKQEHVKLQKLMEKKNQELEVVRQQRERLQEELSQAES 287 Query: 135 LGFDEIRQQQQKIIQEQDAG---LDALSSIISRQKQMGQEIGNELDEQNEIIDDLANLVE 191 DE+++Q + ++ D ++ + +++ + +G +L+ NE+ D+L Sbjct: 288 T-IDELKEQVDAALGAEEMVEMLTDRNLNLEEKVRELRETVG-DLEAMNEMNDELQENAR 345 Query: 192 NTDEKLRNE 200 T+ +LR + Sbjct: 346 ETELELREQ 354 >gi|13259510 dynactin 1 isoform 1 [Homo sapiens] Length = 1278 Score = 38.1 bits (87), Expect = 0.007 Identities = 44/189 (23%), Positives = 85/189 (44%), Gaps = 15/189 (7%) Query: 15 QIAQEIAEKIQQRNQYERKGEKAPKLTVTIRALLQNLKEKIALLKDLLLRAVSTHQITQL 74 ++A+E AE +QQ + E E+ +LT + L ++EK + A S++Q+ QL Sbjct: 312 EMAEERAESLQQ--EVEALKERVDELTTDLEILKAEIEEKGSD------GAASSYQLKQL 363 Query: 75 EGDRRQNLLDDLVTRERLLLASFKNEGAEPDLIRSSLMSEEAKRGAPNPWLFEEPEETRG 134 E + L D + R R L +S K E + + E L EE + Sbjct: 364 EEQNAR--LKDALVRMRDLSSSEKQEHVKLQKLMEKKNQELEVVRQQRERLQEELSQAES 421 Query: 135 LGFDEIRQQQQKIIQEQDAG---LDALSSIISRQKQMGQEIGNELDEQNEIIDDLANLVE 191 DE+++Q + ++ D ++ + +++ + +G +L+ NE+ D+L Sbjct: 422 T-IDELKEQVDAALGAEEMVEMLTDRNLNLEEKVRELRETVG-DLEAMNEMNDELQENAR 479 Query: 192 NTDEKLRNE 200 T+ +LR + Sbjct: 480 ETELELREQ 488 >gi|4759154 synaptosomal-associated protein 29 [Homo sapiens] Length = 258 Score = 38.1 bits (87), Expect = 0.007 Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 4/68 (5%) Query: 140 IRQQQQKIIQEQDAGLDALSSIISRQKQMGQEIGNELDEQNEIIDDLANLVENTDEKLRN 199 +R QKI D+ LD LS + R K + + E++EQ++I+D L V+ D +++ Sbjct: 195 LRAYHQKI----DSNLDELSMGLGRLKDIALGMQTEIEEQDDILDRLTTKVDKLDVNIKS 250 Query: 200 ETRRVNMV 207 R+V + Sbjct: 251 TERKVRQL 258 >gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo sapiens] Length = 750 Score = 37.0 bits (84), Expect = 0.015 Identities = 41/197 (20%), Positives = 90/197 (45%), Gaps = 11/197 (5%) Query: 19 EIAEKIQ-QRNQYERKGEKAPKLTVTIRALLQNL---KEKIALLKDLLLRAVSTHQITQL 74 E EKI+ Q + R+ EK + IR + + +EKI +++ H+ ++ Sbjct: 500 EQEEKIRKQEEKVWRQEEKIREQEEKIREQEEKMWRQEEKIREQEEMWREEEKMHEQEKI 559 Query: 75 -EGDRRQNLLDDLVTRERLLLASFKNEGAEPDLIRSSLMSEEAKRGAPNPWLFEEPEETR 133 E ++RQ D + +E + + + + IR +E KR ++++ E+ R Sbjct: 560 WEEEKRQEQEDKMWRQEEKIREQEEKVWRQEEKIRE----QEEKRQEQEEKMWKQEEKIR 615 Query: 134 GLGFDEIRQQQQKIIQEQDAGLDALSSIISRQKQMGQEIGNELDEQNEIIDDLANLVENT 193 +E Q+Q++ I+EQ+ + + Q++ E ++ EQ E + + + Sbjct: 616 EQ--EEKIQEQEEKIREQEEKIREQEEMTQEQEEKMGEQEEKMCEQEEKMQEQEETMWRQ 673 Query: 194 DEKLRNETRRVNMVDRK 210 +EK+R + +++ + K Sbjct: 674 EEKIREQEKKIREQEEK 690 Score = 35.4 bits (80), Expect = 0.043 Identities = 22/93 (23%), Positives = 48/93 (51%), Gaps = 8/93 (8%) Query: 112 MSEEAKRGAPNPWLFEEPEETRGLGFDEIRQQQQKIIQEQDAGLDALSSIISRQKQMGQE 171 M E+ ++ +E EET ++IR+Q++KI ++++ I Q++M QE Sbjct: 649 MGEQEEKMCEQEEKMQEQEETMWRQEEKIREQEKKIREQEEK--------IREQEEMMQE 700 Query: 172 IGNELDEQNEIIDDLANLVENTDEKLRNETRRV 204 ++ EQ E + + ++ +EK+R + ++ Sbjct: 701 QEEKMWEQEEKMCEQEEKMQEQEEKMRRQEEKM 733 Score = 28.9 bits (63), Expect = 4.0 Identities = 40/161 (24%), Positives = 71/161 (44%), Gaps = 17/161 (10%) Query: 49 QNLKEKIALLKDLLLRAVSTHQITQLEGDRRQNLLDDLVTRERLLLASFKNEGAEPDLIR 108 + LKEK A L++ L S QL + L+ R +LLL + + AE D + Sbjct: 217 EELKEKNAKLQEKLQLVESEKSEIQLNVKELKRKLE----RAKLLLPQQQLQ-AEADHLG 271 Query: 109 SSLMSEEAKRGAP----NPW--LFEEPEETRGLGFDEIRQQQQKI------IQEQDAGLD 156 L S AK A W L ++ EE ++I++ ++KI I+EQ+ + Sbjct: 272 KELQSVSAKLQAQVEENELWNRLNQQQEEKMWRQEEKIQEWEEKIQEQEEKIREQEEKIR 331 Query: 157 ALSSIISRQKQMGQEIGNELDEQNEIIDDLANLVENTDEKL 197 + RQ++M E ++ Q E++ + + +E + Sbjct: 332 EQEEKMRRQEEMMWEKEEKMRRQEEMMWEKEEKMRRQEEMM 372 >gi|18765735 synaptosomal-associated protein 25 isoform SNAP25B [Homo sapiens] Length = 206 Score = 37.0 bits (84), Expect = 0.015 Identities = 44/199 (22%), Positives = 83/199 (41%), Gaps = 16/199 (8%) Query: 20 IAEKIQQRNQYERKGEKAPKLT----VTIRALLQNLKE-KIALLKDLLLRAVSTHQITQL 74 +AE RN+ E +A +L + R +LQ ++E K A ++ L++ Q+ ++ Sbjct: 1 MAEDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLERI 60 Query: 75 EGDRRQNLLDDLVTRERLLLASFK---------NEGAEPDLIRSSLMSEEAKRGAPNPWL 125 E Q + D+ E+ L K N+ D + + + + A P Sbjct: 61 EEGMDQ-INKDMKEAEKNLTDLGKFCGLCVCPCNKLKSSDAYKKAWGNNQDGVVASQPAR 119 Query: 126 FEEPEETRGLGFDEIRQQQQKIIQ-EQDAGLDALSSIISRQKQMGQEIGNELDEQNEIID 184 + E + IR+ + E D L+ +S II + M ++GNE+D QN ID Sbjct: 120 VVDEREQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQID 179 Query: 185 DLANLVENTDEKLRNETRR 203 + ++ ++ +R Sbjct: 180 RIMEKADSNKTRIDEANQR 198 >gi|18765733 synaptosomal-associated protein 25 isoform SNAP25A [Homo sapiens] Length = 206 Score = 37.0 bits (84), Expect = 0.015 Identities = 43/199 (21%), Positives = 84/199 (42%), Gaps = 16/199 (8%) Query: 20 IAEKIQQRNQYERKGEKAPKLT----VTIRALLQNLKE-KIALLKDLLLRAVSTHQITQL 74 +AE RN+ E +A +L + R +LQ ++E K A ++ L++ Q+ ++ Sbjct: 1 MAEDADMRNELEEMQRRADQLADESLESTRRMLQLVEESKDAGIRTLVMLDEQGEQLDRV 60 Query: 75 EGDRRQNLLDDLVTRERLLLASFK---------NEGAEPDLIRSSLMSEEAKRGAPNPWL 125 E + ++ D+ E+ L K N+ D + + + + A P Sbjct: 61 E-EGMNHINQDMKEAEKNLKDLGKCCGLFICPCNKLKSSDAYKKAWGNNQDGVVASQPAR 119 Query: 126 FEEPEETRGLGFDEIRQQQQKIIQ-EQDAGLDALSSIISRQKQMGQEIGNELDEQNEIID 184 + E + IR+ + E D L+ +S II + M ++GNE+D QN ID Sbjct: 120 VVDEREQMAISGGFIRRVTNDARENEMDENLEQVSGIIGNLRHMALDMGNEIDTQNRQID 179 Query: 185 DLANLVENTDEKLRNETRR 203 + ++ ++ +R Sbjct: 180 RIMEKADSNKTRIDEANQR 198 >gi|5729858 nuclear receptor coactivator 2 [Homo sapiens] Length = 1464 Score = 36.2 bits (82), Expect = 0.025 Identities = 36/144 (25%), Positives = 67/144 (46%), Gaps = 15/144 (10%) Query: 50 NLKEKIALLKDLLLRAVSTHQITQLEGDRRQNLLDDLVTRERLLLASFKNEGAEPDLIRS 109 +LKEK +L LL + S + +L + T + L S I+ Sbjct: 682 SLKEKHKILHRLLQDSSSPVDLAKLTAE---------ATGKDLSQESSSTAPGSEVTIKQ 732 Query: 110 SLMSEEAKRGAPNPWLFEEPEETRGLGFDEIRQQQQKIIQEQD-AGLDALSSIISRQKQM 168 +S + K A +L ++ ++T+ +G EI + +++ + D A L ++ + +++M Sbjct: 733 EPVSPKKKENALLRYLLDK-DDTKDIGLPEITPKLERLDSKTDPASNTKLIAMKTEKEEM 791 Query: 169 ----GQEIGNELDEQNEIIDDLAN 188 G + G+ELD EI+DDL N Sbjct: 792 SFEPGDQPGSELDNLEEILDDLQN 815 >gi|239745095 PREDICTED: hypothetical protein LOC645202 [Homo sapiens] Length = 570 Score = 36.2 bits (82), Expect = 0.025 Identities = 41/160 (25%), Positives = 74/160 (46%), Gaps = 12/160 (7%) Query: 49 QNLKEKIALLKDLLLRAVSTHQITQLEGDRRQNLLDDLVTRERLLLASFKNEGAEPDLIR 108 + LKEK A L++ L S QL + L+ R +LLL + + AE D + Sbjct: 205 EELKEKNAKLQEKLQLVESEKSEIQLNVKELKRKLE----RAKLLLPQQQLQ-AEADHLG 259 Query: 109 SSLMSEEAKRGAP----NPW--LFEEPEETRGLGFDEIRQQQQKIIQEQDAGLDALSSII 162 L S AK A W L ++ EE ++I+++++K IQEQ+ + + Sbjct: 260 KELQSVSAKLQAQVEENELWNRLNQQQEEKMWRQEEKIQEREEK-IQEQEEKIREQEEKM 318 Query: 163 SRQKQMGQEIGNELDEQNEIIDDLANLVENTDEKLRNETR 202 RQ++M E ++ Q E++ + + +EK+ + + Sbjct: 319 RRQEEMMWEKEEKMRRQEEMMWEKEEKIRELEEKMHEQEK 358 Score = 34.7 bits (78), Expect = 0.073 Identities = 36/198 (18%), Positives = 86/198 (43%), Gaps = 10/198 (5%) Query: 22 EKIQQRNQYERKGEKAPKLTVTIRALLQNLKEKIALLKDLLLRAVSTHQITQLEGDRRQN 81 EKI+++ + + + K + IR + ++E+ ++++ + + + + Q Sbjct: 370 EKIREQEKRQEQEAKMWRQEEKIREQEEKIREQEEMMQEQEEKMGEQEEKMWEQEEEMQE 429 Query: 82 LLDDLVTRERLLLASFKNEGAEPDLIRSS---LMSEEAKRGAPNPWLFE------EPEET 132 + + +E + K + + IR + +E K G + E E EE Sbjct: 430 QEEKMRRQEEKIREQEKKIREQEEKIREQEEMMQEQEEKMGEQEGKMCEQEAKMQEQEEK 489 Query: 133 RGLGFDEIRQQQQKIIQEQDAGLDALSSIISRQKQMGQEIGNELDEQNEIIDDLANLVEN 192 ++IR+Q++K I+EQ+ + ++ Q++ E ++ EQ E + + + Sbjct: 490 MRRQEEKIREQEKK-IREQEEKIREQEEMMQEQEEKMWEQEEKMCEQEEKMQEQEEKMRR 548 Query: 193 TDEKLRNETRRVNMVDRK 210 +EK+R + R+ + K Sbjct: 549 QEEKMREQEVRLRQQEEK 566 >gi|116256481 TNFAIP3 interacting protein 1 [Homo sapiens] Length = 636 Score = 34.7 bits (78), Expect = 0.073 Identities = 43/172 (25%), Positives = 71/172 (41%), Gaps = 23/172 (13%) Query: 45 RALLQNLKEKIALLKDLLLRAVSTHQITQLEGDRRQNLLDDLVTRERLLLASFKNEGAEP 104 R++ Q ++KI L+ L A Q+T LE +R Q D +LLLA K E E Sbjct: 325 RSMKQQYEQKITELRQKL--ADLQKQVTDLEAEREQKQRD---FDRKLLLAKSKIEMEET 379 Query: 105 DLIRSSLMSEEAKRGAPNPWLFEEPEETRGLGFDEIRQQQQKIIQEQDAGLDALSSIISR 164 D + L +E + +L ++ R+ Q+K IQ + L+ SI + Sbjct: 380 D--KEQLTAEAKELRQKVKYLQDQLSP-----LTRQREYQEKEIQRLNKALEEALSIQTP 432 Query: 165 QKQMGQEIGN-----------ELDEQNEIIDDLANLVENTDEKLRNETRRVN 205 G+ EL QNE++ + E ++ R++ R+N Sbjct: 433 PSSPPTAFGSPEGAGALLRKQELVTQNELLKQQVKIFEEDFQRERSDRERMN 484 >gi|239745079 PREDICTED: Putative golgin subfamily A member 6-like protein 6 [Homo sapiens] Length = 724 Score = 34.7 bits (78), Expect = 0.073 Identities = 20/83 (24%), Positives = 44/83 (53%), Gaps = 8/83 (9%) Query: 128 EPEETRGLGFDEIRQQQQKIIQEQDAGLDALSSIISRQKQMGQEIGNELDEQNEIIDDLA 187 E EE ++IR+Q++KI ++++ I Q++M QE ++ EQ E + + Sbjct: 575 EQEEKVWRQEEKIREQEEKIREQEEK--------IREQEEMTQEQEEKMGEQEEKMCEQE 626 Query: 188 NLVENTDEKLRNETRRVNMVDRK 210 ++ +EK+R + ++ ++K Sbjct: 627 EKMQEQEEKMRRQEEKIREQEKK 649 Score = 32.0 bits (71), Expect = 0.48 Identities = 41/174 (23%), Positives = 77/174 (44%), Gaps = 17/174 (9%) Query: 49 QNLKEKIALLKDLLLRAVSTHQITQLEGDRRQNLLDDLVTRERLLLASFKNEGAEPDLIR 108 + LKEK A L++ L S QL + L+ R +LLL + + AE D + Sbjct: 278 EELKEKNAKLQEKLQLVESEKSEIQLNVKELKRKLE----RAKLLLPQQQLQ-AEADHLG 332 Query: 109 SSLMSEEAKRGAP----NPW--LFEEPEETRGLGFDEIRQQQQKI------IQEQDAGLD 156 L S AK A W L ++ EE ++I++ ++KI I+EQ+ + Sbjct: 333 KELQSVSAKLQAQVEENELWNRLNQQQEEKMWRQEEKIQEWEEKIQEQEEKIREQEEKIR 392 Query: 157 ALSSIISRQKQMGQEIGNELDEQNEIIDDLANLVENTDEKLRNETRRVNMVDRK 210 + RQ++M E ++ Q E++ + + +E + + ++ ++ K Sbjct: 393 EQEEKMRRQEEMMWEKEEKMRRQEEMMWEKEEKMRRQEEMMWEKEEKIRELEEK 446 Score = 31.2 bits (69), Expect = 0.81 Identities = 23/93 (24%), Positives = 47/93 (50%), Gaps = 8/93 (8%) Query: 112 MSEEAKRGAPNPWLFEEPEETRGLGFDEIRQQQQKIIQEQDAGLDALSSIISRQKQMGQE 171 M E+ ++ +E EE ++IR+Q++K I+EQ+ I Q++M QE Sbjct: 615 MGEQEEKMCEQEEKMQEQEEKMRRQEEKIREQEKK-IREQE-------EKIREQEEMMQE 666 Query: 172 IGNELDEQNEIIDDLANLVENTDEKLRNETRRV 204 ++ EQ E + + ++ +EK+R + ++ Sbjct: 667 QEEKMWEQEEKMCEQEEKMQEQEEKMRRQEEKM 699 >gi|47778943 syntaxin 16 isoform a [Homo sapiens] Length = 325 Score = 34.7 bits (78), Expect = 0.073 Identities = 19/91 (20%), Positives = 49/91 (53%) Query: 142 QQQQKIIQEQDAGLDALSSIISRQKQMGQEIGNELDEQNEIIDDLANLVENTDEKLRNET 201 +Q +++E++ + + IS ++ +++G + EQ ++D + VE + K + Sbjct: 227 EQNTLMVEEREREIRQIVQSISDLNEIFRDLGAMIVEQGTVLDRIDYNVEQSCIKTEDGL 286 Query: 202 RRVNMVDRKSASCGMIMVILLLLVAIVVVAV 232 ++++ ++ ++VIL+L V I+V+ V Sbjct: 287 KQLHKAEQYQKKNRKMLVILILFVIIIVLIV 317 >gi|198041692 syntaxin 16 isoform d [Homo sapiens] Length = 308 Score = 34.7 bits (78), Expect = 0.073 Identities = 19/91 (20%), Positives = 49/91 (53%) Query: 142 QQQQKIIQEQDAGLDALSSIISRQKQMGQEIGNELDEQNEIIDDLANLVENTDEKLRNET 201 +Q +++E++ + + IS ++ +++G + EQ ++D + VE + K + Sbjct: 210 EQNTLMVEEREREIRQIVQSISDLNEIFRDLGAMIVEQGTVLDRIDYNVEQSCIKTEDGL 269 Query: 202 RRVNMVDRKSASCGMIMVILLLLVAIVVVAV 232 ++++ ++ ++VIL+L V I+V+ V Sbjct: 270 KQLHKAEQYQKKNRKMLVILILFVIIIVLIV 300 >gi|198041688 syntaxin 16 isoform c [Homo sapiens] Length = 321 Score = 34.7 bits (78), Expect = 0.073 Identities = 19/91 (20%), Positives = 49/91 (53%) Query: 142 QQQQKIIQEQDAGLDALSSIISRQKQMGQEIGNELDEQNEIIDDLANLVENTDEKLRNET 201 +Q +++E++ + + IS ++ +++G + EQ ++D + VE + K + Sbjct: 223 EQNTLMVEEREREIRQIVQSISDLNEIFRDLGAMIVEQGTVLDRIDYNVEQSCIKTEDGL 282 Query: 202 RRVNMVDRKSASCGMIMVILLLLVAIVVVAV 232 ++++ ++ ++VIL+L V I+V+ V Sbjct: 283 KQLHKAEQYQKKNRKMLVILILFVIIIVLIV 313 >gi|34447229 syntaxin 16 isoform b [Homo sapiens] Length = 304 Score = 34.7 bits (78), Expect = 0.073 Identities = 19/91 (20%), Positives = 49/91 (53%) Query: 142 QQQQKIIQEQDAGLDALSSIISRQKQMGQEIGNELDEQNEIIDDLANLVENTDEKLRNET 201 +Q +++E++ + + IS ++ +++G + EQ ++D + VE + K + Sbjct: 206 EQNTLMVEEREREIRQIVQSISDLNEIFRDLGAMIVEQGTVLDRIDYNVEQSCIKTEDGL 265 Query: 202 RRVNMVDRKSASCGMIMVILLLLVAIVVVAV 232 ++++ ++ ++VIL+L V I+V+ V Sbjct: 266 KQLHKAEQYQKKNRKMLVILILFVIIIVLIV 296 >gi|94538359 golgi autoantigen, golgin subfamily a, 6B [Homo sapiens] Length = 693 Score = 34.7 bits (78), Expect = 0.073 Identities = 50/226 (22%), Positives = 98/226 (43%), Gaps = 48/226 (21%) Query: 15 QIAQEIAEKIQQRNQYER--KGEKAP------KLTVTIRAL----------LQNLKEKIA 56 Q+ + + + +R++Y + KGE+A K++V R L +Q L+ ++ Sbjct: 217 QVTESLKQVQLERDEYAKHIKGERARWQERMWKMSVEARTLKEEKKRDIHRIQELERSLS 276 Query: 57 LLKDLLLRAVS------THQITQLEGDRRQNLLDDLVTRERLLLASFKNEGAEPDLIRSS 110 LK+ + + S T + QL+ D ++L ++ E L + +N A S Sbjct: 277 ELKNQMAKPPSLAPPAVTSVVEQLQ-DEAKHLRQEVEGLEGKLQSQVENNQA------LS 329 Query: 111 LMSEEAKRGAPNPWLFEEPEETRGLGFDEIRQQ------------QQKIIQEQDAGLDAL 158 L+S+E K+ L E+ E R +R+Q QQK +QEQ L Sbjct: 330 LLSKEQKQR-----LQEQEEMLREQEVQRVREQERLCEQNERLREQQKTLQEQGERLRKQ 384 Query: 159 SSIISRQKQMGQEIGNELDEQNEIIDDLANLVENTDEKLRNETRRV 204 + +Q++ ++ L +Q + + D + +E+L+ + R+ Sbjct: 385 EQRLRKQEERLRKEEERLQKQEKRLWDQEERLWKKEERLQKQEERL 430 >gi|5454166 vesicle transport through interaction with t-SNAREs 1B [Homo sapiens] Length = 232 Score = 33.9 bits (76), Expect = 0.13 Identities = 18/64 (28%), Positives = 34/64 (53%) Query: 161 IISRQKQMGQEIGNELDEQNEIIDDLANLVENTDEKLRNETRRVNMVDRKSASCGMIMVI 220 I + Q+G EI EL EQ + ++ + + NT E L + + + RK + +++ I Sbjct: 152 IATETDQIGSEIIEELGEQRDQLERTKSRLVNTSENLSKSRKILRSMSRKVTTNKLLLSI 211 Query: 221 LLLL 224 ++LL Sbjct: 212 IILL 215 >gi|223634475 golgi autoantigen, golgin subfamily a, 6D [Homo sapiens] Length = 693 Score = 33.5 bits (75), Expect = 0.16 Identities = 50/226 (22%), Positives = 97/226 (42%), Gaps = 48/226 (21%) Query: 15 QIAQEIAEKIQQRNQYER--KGEKAP------KLTVTIRAL----------LQNLKEKIA 56 Q+ + + + +R++Y + KGE+A K++V R L +Q L+ ++ Sbjct: 217 QVTESLKQVQLERDEYAKHIKGERARWQERMWKMSVEARTLKEEKKRDIHRIQELERSLS 276 Query: 57 LLKDLLLRAVS------THQITQLEGDRRQNLLDDLVTRERLLLASFKNEGAEPDLIRSS 110 LK+ + S T + QL+ D ++L ++ E L + +N A S Sbjct: 277 ELKNQMAEPPSLAPPAVTSVVEQLQ-DEAKHLRQEVEGLEGKLQSQVENNQA------LS 329 Query: 111 LMSEEAKRGAPNPWLFEEPEETRGLGFDEIRQQ------------QQKIIQEQDAGLDAL 158 L+S+E K+ L E+ E R +R+Q QQK +QEQ L Sbjct: 330 LLSKEQKQR-----LQEQEEMLREQEAQRVREQERLCEQNERLREQQKTLQEQGERLRKQ 384 Query: 159 SSIISRQKQMGQEIGNELDEQNEIIDDLANLVENTDEKLRNETRRV 204 + +Q++ ++ L +Q + + D + +E+L+ + R+ Sbjct: 385 EQRLRKQEERLRKEEERLQKQEKRLWDQEERLWKKEERLQKQEERL 430 >gi|51472437 PREDICTED: golgi autoantigen, golgin subfamily a, 6C isoform 1 [Homo sapiens] Length = 693 Score = 33.5 bits (75), Expect = 0.16 Identities = 50/226 (22%), Positives = 97/226 (42%), Gaps = 48/226 (21%) Query: 15 QIAQEIAEKIQQRNQYER--KGEKAP------KLTVTIRAL----------LQNLKEKIA 56 Q+ + + + +R++Y + KGE+A K++V R L +Q L+ ++ Sbjct: 217 QVTESLKQVQLERDEYAKHIKGERARWQERMWKMSVEARTLKEEKKRDIHRIQELERSLS 276 Query: 57 LLKDLLLRAVS------THQITQLEGDRRQNLLDDLVTRERLLLASFKNEGAEPDLIRSS 110 LK+ + S T + QL+ D ++L ++ E L + +N A S Sbjct: 277 ELKNQMAEPPSLAPPAVTSVVEQLQ-DEAKHLRQEVEGLEGKLQSQVENNQA------LS 329 Query: 111 LMSEEAKRGAPNPWLFEEPEETRGLGFDEIRQQ------------QQKIIQEQDAGLDAL 158 L+S+E K+ L E+ E R +R+Q QQK +QEQ L Sbjct: 330 LLSKEQKQR-----LQEQEEMLREQEAQRVREQERLCEQNERLREQQKTLQEQGERLRKQ 384 Query: 159 SSIISRQKQMGQEIGNELDEQNEIIDDLANLVENTDEKLRNETRRV 204 + +Q++ ++ L +Q + + D + +E+L+ + R+ Sbjct: 385 EQRLRKQEERLRKEEERLQKQEKRLWDQEERLWKKEERLQKQEERL 430 >gi|146133848 golgi autoantigen, golgin subfamily a, 6 [Homo sapiens] Length = 693 Score = 33.5 bits (75), Expect = 0.16 Identities = 50/226 (22%), Positives = 97/226 (42%), Gaps = 48/226 (21%) Query: 15 QIAQEIAEKIQQRNQYER--KGEKAP------KLTVTIRAL----------LQNLKEKIA 56 Q+ + + + +R++Y + KGE+A K++V R L +Q L+ ++ Sbjct: 217 QVTESLKQVQLERDEYAKHIKGERARWQERMWKMSVEARTLKEEKKRDIHRIQELERSLS 276 Query: 57 LLKDLLLRAVS------THQITQLEGDRRQNLLDDLVTRERLLLASFKNEGAEPDLIRSS 110 LK+ + S T + QL+ D ++L ++ E L + +N A S Sbjct: 277 ELKNQMAEPPSLAPPAVTSVVEQLQ-DEAKHLRQEVEGLEGKLQSQVENNQA------LS 329 Query: 111 LMSEEAKRGAPNPWLFEEPEETRGLGFDEIRQQ------------QQKIIQEQDAGLDAL 158 L+S+E K+ L E+ E R +R+Q QQK +QEQ L Sbjct: 330 LLSKEQKQR-----LQEQEEMLREQEAQRVREQERLCEQNERLREQQKTLQEQGERLRKQ 384 Query: 159 SSIISRQKQMGQEIGNELDEQNEIIDDLANLVENTDEKLRNETRRV 204 + +Q++ ++ L +Q + + D + +E+L+ + R+ Sbjct: 385 EQRLRKQEERLRKEEERLQKQEKRLWDQEERLWKKEERLQKQEERL 430 >gi|21735548 centrosomal protein 2 [Homo sapiens] Length = 2442 Score = 33.1 bits (74), Expect = 0.21 Identities = 37/137 (27%), Positives = 59/137 (43%), Gaps = 16/137 (11%) Query: 22 EKIQQRNQYERKGEKAPKLTVTIRALLQNLKEKIALLKDLLLRAVSTHQITQLEGDRRQN 81 E+ Q + Q ER EKA L + LKE+ L+D +A + +EG R Q Sbjct: 1825 EQQQAQGQEERVKEKADALQGALEQAHMTLKERHGELQDHKEQARRLEEELAVEGRRVQA 1884 Query: 82 LLDDLVTRERLLLASFKNEGAEPDLIRSSLMSEEAKRGAPNPWLFEEPEETRGLGFDEIR 141 L + +L + E E + +L + A++ E ETR L + Sbjct: 1885 LEE--------VLGDLRAESREQEKALLALQQQCAEQAQ------EHEVETRAL--QDSW 1928 Query: 142 QQQQKIIQEQDAGLDAL 158 Q Q +++E+D L+AL Sbjct: 1929 LQAQAVLKERDQELEAL 1945 Score = 31.2 bits (69), Expect = 0.81 Identities = 41/178 (23%), Positives = 76/178 (42%), Gaps = 18/178 (10%) Query: 45 RALLQNLKEKIALLKDLLLRAVSTHQITQLEGDRRQNLLDDLVTRERLLLASFKNEGAEP 104 R LLQ KE + + L AV + + L +DL T L KNE E Sbjct: 1343 RELLQAAKENLTAQVEHLQAAVVE---ARAQASAAGILEEDLRTARSAL--KLKNEEVES 1397 Query: 105 DLIRSSLMSEEA-------KRGAPNPWLFEEPEETRGLGFDEIRQQQQKIIQE---QDAG 154 + R+ + E+ K N L + R + +R Q Q++ ++ Q A Sbjct: 1398 ERERAQALQEQGELKVAQGKALQENLALLTQTLAEREEEVETLRGQIQELEKQREMQKAA 1457 Query: 155 LDALSSIISRQKQ---MGQEIGNELDEQNEIIDDLANLVENTDEKLRNETRRVNMVDR 209 L+ LS + ++ Q + QE EL++ +++ L V+ ++KL + ++ +++ Sbjct: 1458 LELLSLDLKKRNQEVDLQQEQIQELEKCRSVLEHLPMAVQEREQKLTVQREQIRELEK 1515 Score = 28.9 bits (63), Expect = 4.0 Identities = 35/140 (25%), Positives = 61/140 (43%), Gaps = 12/140 (8%) Query: 73 QLEGDR-RQNLLDDLV-TRERLLLASFKNEGAEPDLIRSSLMSEEAKRGAPNPWLFEEPE 130 QLE ++ R +LL+ L+ T++ L AS + E D+ + + E+ G L E Sbjct: 920 QLETEKERVSLLETLLQTQKELADASQQLERLRQDM-KVQKLKEQETTGILQTQLQEAQR 978 Query: 131 ETRGLGFDEIRQQQQKIIQEQDAGLDALSSIISRQKQMGQEIGNELDEQNEIIDDLANLV 190 E + + RQ + + Q+ L + QKQ+ +L Q DD LV Sbjct: 979 ELK----EAARQHRDDLAALQEESSSLLQDKMDLQKQV-----EDLKSQLVAQDDSQRLV 1029 Query: 191 ENTDEKLRNETRRVNMVDRK 210 E ++ ET+ N + ++ Sbjct: 1030 EQEVQEKLRETQEYNRIQKE 1049 Score = 28.9 bits (63), Expect = 4.0 Identities = 26/125 (20%), Positives = 54/125 (43%), Gaps = 18/125 (14%) Query: 11 DSTCQIAQEIAEKIQQRNQYERKGEKAPKLTVTIRALLQNLKEKIALLKD---------- 60 DS + QE+ EK+++ +Y R ++ + ++ L ++++ +L++ Sbjct: 1024 DSQRLVEQEVQEKLRETQEYNRIQKELEREKASLTLSLMEKEQRLLVLQEADSIRQQELS 1083 Query: 61 LLLRAVSTHQITQLEGDRRQNLL--------DDLVTRERLLLASFKNEGAEPDLIRSSLM 112 L + + Q Q E + LL D + +E LL + +R+SL Sbjct: 1084 ALRQDMQEAQGEQKELSAQMELLRQEVKEKEADFLAQEAQLLEELEASHITEQQLRASLW 1143 Query: 113 SEEAK 117 ++EAK Sbjct: 1144 AQEAK 1148 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.315 0.132 0.363 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 7,785,199 Number of Sequences: 37866 Number of extensions: 317817 Number of successful extensions: 1895 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 42 Number of HSP's successfully gapped in prelim test: 92 Number of HSP's that attempted gapping in prelim test: 1727 Number of HSP's gapped (non-prelim): 279 length of query: 236 length of database: 18,247,518 effective HSP length: 99 effective length of query: 137 effective length of database: 14,498,784 effective search space: 1986333408 effective search space used: 1986333408 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.