Guide to the Human Genome
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Name: BUB1 Sequence: fasta or formatted (1085aa) NCBI GI: 4757878
Description:

budding uninhibited by benzimidazoles 1

Referenced in:

Spindle, M phase, and Meiosis

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9         75           2
 C cysteine            1.8         20           1
 D aspartate           4.3         47           2
 E glutamate           7.9         86           2
 F phenylalanine       4.4         48           2
 G glycine             5.1         55           2
 H histidine           3.2         35           2
 I isoleucine          3.9         42           2
 K lysine              7.1         77           3
 L leucine             9.4        102           3
 M methionine          3.1         34           1
 N asparagine          5.0         54           2
 P proline             6.1         66           2
 Q glutamine           6.1         66           3
 R arginine            3.4         37           2
 S serine              7.8         85           2
 T threonine           4.5         49           2
 V valine              5.9         64           2
 W tryptophan          1.2         13           1
 Y tyrosine            2.8         30           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   budding uninhibited by benzimidazoles 1 
BUB1B                 0.043   budding uninhibited by benzimidazoles 1 beta 
HUNK                  0.015   hormonally upregulated Neu-associated kinase 
DYRK1A                0.013   dual-specificity tyrosine-(Y)-phosphorylation regula...
DYRK1A                0.013   dual-specificity tyrosine-(Y)-phosphorylation regula...
DYRK1A                0.013   dual-specificity tyrosine-(Y)-phosphorylation regula...
DYRK1A                0.013   dual-specificity tyrosine-(Y)-phosphorylation regula...
DYRK1A                0.013   dual-specificity tyrosine-(Y)-phosphorylation regula...
DYRK1B                0.013   dual-specificity tyrosine-(Y)-phosphorylation regulat...
CAMK1D                0.012   calcium/calmodulin-dependent protein kinase ID isofor...
CAMK1D                0.012   calcium/calmodulin-dependent protein kinase ID isofo...
CAMK1                 0.012   calcium/calmodulin-dependent protein kinase I 
NEK11                 0.012   NIMA-related kinase 11 isoform 2 
NEK11                 0.012   NIMA-related kinase 11 isoform 3 
NEK11                 0.012   NIMA-related kinase 11 isoform 1 
NEK6                  0.011   NIMA-related kinase 6 isoform 1 
NEK6                  0.011   NIMA-related kinase 6 isoform 2 
GRK7                  0.011   G-protein-coupled receptor kinase 7 
DYRK1B                0.011   dual-specificity tyrosine-(Y)-phosphorylation regulat...
DYRK1B                0.011   dual-specificity tyrosine-(Y)-phosphorylation regulat...
GRK1                  0.011   rhodopsin kinase 
STK36                 0.010   serine/threonine kinase 36 
STK33                 0.010   serine/threonine kinase 33 
CIT                   0.010   citron 
CAMK1G                0.010   calcium/calmodulin-dependent protein kinase IG [Homo...
CSNK1A1               0.009   casein kinase 1, alpha 1 isoform 1 
CSNK1A1               0.009   casein kinase 1, alpha 1 isoform 2 
GRK5                  0.009   G protein-coupled receptor kinase 5 
RPS6KA5               0.009   ribosomal protein S6 kinase, polypeptide 5 isoform a...
ULK1                  0.009   Unc-51-like kinase 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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