Guide to the Human Genome
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Name: SH2D3C Sequence: fasta or formatted (700aa) NCBI GI: 216547801
Description:

SH2 domain containing 3C isoform e

Referenced in:

Mammary Tissues
Non-Receptor Tyrosine Kinase Pathways

Other entries for this name:
alt prot [703aa] SH2 domain containing 3C isoform b
alt prot [506aa] SH2 domain containing 3C isoform c
alt prot [506aa] SH2 domain containing 3C isoform c
alt prot [702aa] SH2 domain containing 3C isoform d
alt prot [860aa] SH2 domain containing 3C isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.0         56           3
 C cysteine            1.7         12           2
 D aspartate           3.4         24           1
 E glutamate           7.3         51           3
 F phenylalanine       2.9         20           1
 G glycine             6.4         45           2
 H histidine           3.7         26           2
 I isoleucine          2.7         19           2
 K lysine              4.6         32           2
 L leucine            11.1         78           2
 M methionine          2.1         15           1
 N asparagine          1.6         11           1
 P proline             6.9         48           2
 Q glutamine           3.6         25           2
 R arginine            6.7         47           2
 S serine             11.1         78           3
 T threonine           6.4         45           2
 V valine              6.0         42           3
 W tryptophan          1.3          9           1
 Y tyrosine            2.4         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   SH2 domain containing 3C isoform e 
SH2D3C                0.996   SH2 domain containing 3C isoform d 
SH2D3C                0.965   SH2 domain containing 3C isoform b 
SH2D3C                0.964   SH2 domain containing 3C isoform a 
SH2D3C                0.714   SH2 domain containing 3C isoform c 
SH2D3C                0.714   SH2 domain containing 3C isoform c 
BCAR3                 0.379   breast cancer antiestrogen resistance 3 
SH2D3A                0.210   SH2 domain containing 3A 
FER                   0.036   fer (fps/fes related) tyrosine kinase 
SHC1                  0.023   SHC (Src homology 2 domain containing) transforming...
SHC1                  0.023   SHC (Src homology 2 domain containing) transforming...
SHC1                  0.023   SHC (Src homology 2 domain containing) transforming...
SHC1                  0.023   SHC (Src homology 2 domain containing) transforming ...
SHC4                  0.022   rai-like protein 
CRKL                  0.022   v-crk sarcoma virus CT10 oncogene homolog (avian)-lik...
FES                   0.022   feline sarcoma oncogene isoform 2 
FES                   0.022   feline sarcoma oncogene isoform 1 
LOC100291393          0.022   PREDICTED: hypothetical protein XP_002347924 
SHC2                  0.022   SHC (Src homology 2 domain containing) transforming...
SHC3                  0.020   src homology 2 domain-containing transforming prote...
ABL2                  0.018   arg tyrosine kinase isoform c 
ABL2                  0.018   arg tyrosine kinase isoform b 
ABL2                  0.018   arg tyrosine kinase isoform e 
ABL2                  0.018   arg tyrosine kinase isoform d 
ABL2                  0.018   arg tyrosine kinase isoform a 
ABL1                  0.018   c-abl oncogene 1, receptor tyrosine kinase isoform a...
ABL1                  0.018   c-abl oncogene 1, receptor tyrosine kinase isoform b...
BAT2D1                0.018   HBxAg transactivated protein 2 
GRB2                  0.017   growth factor receptor-bound protein 2 isoform 1 [Hom...
CRK                   0.017   v-crk sarcoma virus CT10 oncogene homolog isoform a ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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