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Search of human proteins with 46411159
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|46411159 TEA domain family member 4 isoform 3 [Homo sapiens]
(305 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|46411159 TEA domain family member 4 isoform 3 [Homo sapiens] 629 0.0
gi|46411152 TEA domain family member 4 isoform 1 [Homo sapiens] 629 0.0
gi|46411156 TEA domain family member 4 isoform 2 [Homo sapiens] 570 e-163
gi|11386151 TEA domain family member 1 [Homo sapiens] 458 e-129
gi|42490753 TEA domain family member 3 [Homo sapiens] 416 e-116
gi|20070103 TEA domain family member 2 [Homo sapiens] 363 e-100
gi|12751477 forkhead box L2 [Homo sapiens] 40 0.003
gi|90819237 myeloid/lymphoid or mixed-lineage leukemia (trithora... 38 0.010
gi|239757425 PREDICTED: hypothetical protein XP_002345433 [Homo ... 38 0.013
gi|239751942 PREDICTED: hypothetical protein [Homo sapiens] 38 0.013
gi|239746425 PREDICTED: hypothetical protein XP_002344219 [Homo ... 38 0.013
gi|154355000 KH-type splicing regulatory protein [Homo sapiens] 37 0.028
gi|150170670 piccolo isoform 2 [Homo sapiens] 37 0.028
gi|150378539 piccolo isoform 1 [Homo sapiens] 37 0.028
gi|194578898 hypothetical protein LOC100170841 [Homo sapiens] 37 0.028
gi|62945417 dystrophia myotonica-containing WD repeat motif prot... 37 0.028
gi|162329583 cleavage and polyadenylation specific factor 6, 68 ... 36 0.037
gi|55750053 atrophin-1 [Homo sapiens] 36 0.037
gi|55750041 atrophin-1 [Homo sapiens] 36 0.037
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] 35 0.083
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens] 35 0.083
gi|112421108 capicua homolog [Homo sapiens] 35 0.083
gi|19923312 v-myc myelocytomatosis viral related oncogene, neuro... 35 0.11
gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens] 34 0.14
gi|38327539 inositol polyphosphate-5-phosphatase E [Homo sapiens] 34 0.14
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 34 0.18
gi|4759208 TAO kinase 2 isoform 1 [Homo sapiens] 34 0.18
gi|119829187 alpha 1 type XVII collagen [Homo sapiens] 34 0.18
gi|57165375 glutamate receptor, ionotropic, N-methyl D-aspartate... 34 0.18
gi|57165373 glutamate receptor, ionotropic, N-methyl D-aspartate... 34 0.18
>gi|46411159 TEA domain family member 4 isoform 3 [Homo sapiens]
Length = 305
Score = 629 bits (1622), Expect = 0.0
Identities = 305/305 (100%), Positives = 305/305 (100%)
Query: 1 MAAMSSAQIISATAFHSSMALARGPGRPAVSGFWQGALPGQAGTSHDVKPFSQQTYAVQP 60
MAAMSSAQIISATAFHSSMALARGPGRPAVSGFWQGALPGQAGTSHDVKPFSQQTYAVQP
Sbjct: 1 MAAMSSAQIISATAFHSSMALARGPGRPAVSGFWQGALPGQAGTSHDVKPFSQQTYAVQP 60
Query: 61 PLPLPGFESPAGPAPSPSAPPAPPWQGRSVASSKLWMLEFSAFLEQQQDPDTYNKHLFVH 120
PLPLPGFESPAGPAPSPSAPPAPPWQGRSVASSKLWMLEFSAFLEQQQDPDTYNKHLFVH
Sbjct: 61 PLPLPGFESPAGPAPSPSAPPAPPWQGRSVASSKLWMLEFSAFLEQQQDPDTYNKHLFVH 120
Query: 121 IGQSSPSYSDPYLEAVDIRQIYDKFPEKKGGLKDLFERGPSNAFFLVKFWADLNTNIEDE 180
IGQSSPSYSDPYLEAVDIRQIYDKFPEKKGGLKDLFERGPSNAFFLVKFWADLNTNIEDE
Sbjct: 121 IGQSSPSYSDPYLEAVDIRQIYDKFPEKKGGLKDLFERGPSNAFFLVKFWADLNTNIEDE 180
Query: 181 GSSFYGVSSQYESPENMIITCSTKVCSFGKQVVEKVETEYARYENGHYSYRIHRSPLCEY 240
GSSFYGVSSQYESPENMIITCSTKVCSFGKQVVEKVETEYARYENGHYSYRIHRSPLCEY
Sbjct: 181 GSSFYGVSSQYESPENMIITCSTKVCSFGKQVVEKVETEYARYENGHYSYRIHRSPLCEY 240
Query: 241 MINFIHKLKHLPEKYMMNSVLENFTILQVVTNRDTQETLLCIAYVFEVSASEHGAQHHIY 300
MINFIHKLKHLPEKYMMNSVLENFTILQVVTNRDTQETLLCIAYVFEVSASEHGAQHHIY
Sbjct: 241 MINFIHKLKHLPEKYMMNSVLENFTILQVVTNRDTQETLLCIAYVFEVSASEHGAQHHIY 300
Query: 301 RLVKE 305
RLVKE
Sbjct: 301 RLVKE 305
>gi|46411152 TEA domain family member 4 isoform 1 [Homo sapiens]
Length = 434
Score = 629 bits (1622), Expect = 0.0
Identities = 305/305 (100%), Positives = 305/305 (100%)
Query: 1 MAAMSSAQIISATAFHSSMALARGPGRPAVSGFWQGALPGQAGTSHDVKPFSQQTYAVQP 60
MAAMSSAQIISATAFHSSMALARGPGRPAVSGFWQGALPGQAGTSHDVKPFSQQTYAVQP
Sbjct: 130 MAAMSSAQIISATAFHSSMALARGPGRPAVSGFWQGALPGQAGTSHDVKPFSQQTYAVQP 189
Query: 61 PLPLPGFESPAGPAPSPSAPPAPPWQGRSVASSKLWMLEFSAFLEQQQDPDTYNKHLFVH 120
PLPLPGFESPAGPAPSPSAPPAPPWQGRSVASSKLWMLEFSAFLEQQQDPDTYNKHLFVH
Sbjct: 190 PLPLPGFESPAGPAPSPSAPPAPPWQGRSVASSKLWMLEFSAFLEQQQDPDTYNKHLFVH 249
Query: 121 IGQSSPSYSDPYLEAVDIRQIYDKFPEKKGGLKDLFERGPSNAFFLVKFWADLNTNIEDE 180
IGQSSPSYSDPYLEAVDIRQIYDKFPEKKGGLKDLFERGPSNAFFLVKFWADLNTNIEDE
Sbjct: 250 IGQSSPSYSDPYLEAVDIRQIYDKFPEKKGGLKDLFERGPSNAFFLVKFWADLNTNIEDE 309
Query: 181 GSSFYGVSSQYESPENMIITCSTKVCSFGKQVVEKVETEYARYENGHYSYRIHRSPLCEY 240
GSSFYGVSSQYESPENMIITCSTKVCSFGKQVVEKVETEYARYENGHYSYRIHRSPLCEY
Sbjct: 310 GSSFYGVSSQYESPENMIITCSTKVCSFGKQVVEKVETEYARYENGHYSYRIHRSPLCEY 369
Query: 241 MINFIHKLKHLPEKYMMNSVLENFTILQVVTNRDTQETLLCIAYVFEVSASEHGAQHHIY 300
MINFIHKLKHLPEKYMMNSVLENFTILQVVTNRDTQETLLCIAYVFEVSASEHGAQHHIY
Sbjct: 370 MINFIHKLKHLPEKYMMNSVLENFTILQVVTNRDTQETLLCIAYVFEVSASEHGAQHHIY 429
Query: 301 RLVKE 305
RLVKE
Sbjct: 430 RLVKE 434
>gi|46411156 TEA domain family member 4 isoform 2 [Homo sapiens]
Length = 391
Score = 570 bits (1469), Expect = e-163
Identities = 273/273 (100%), Positives = 273/273 (100%)
Query: 33 FWQGALPGQAGTSHDVKPFSQQTYAVQPPLPLPGFESPAGPAPSPSAPPAPPWQGRSVAS 92
FWQGALPGQAGTSHDVKPFSQQTYAVQPPLPLPGFESPAGPAPSPSAPPAPPWQGRSVAS
Sbjct: 119 FWQGALPGQAGTSHDVKPFSQQTYAVQPPLPLPGFESPAGPAPSPSAPPAPPWQGRSVAS 178
Query: 93 SKLWMLEFSAFLEQQQDPDTYNKHLFVHIGQSSPSYSDPYLEAVDIRQIYDKFPEKKGGL 152
SKLWMLEFSAFLEQQQDPDTYNKHLFVHIGQSSPSYSDPYLEAVDIRQIYDKFPEKKGGL
Sbjct: 179 SKLWMLEFSAFLEQQQDPDTYNKHLFVHIGQSSPSYSDPYLEAVDIRQIYDKFPEKKGGL 238
Query: 153 KDLFERGPSNAFFLVKFWADLNTNIEDEGSSFYGVSSQYESPENMIITCSTKVCSFGKQV 212
KDLFERGPSNAFFLVKFWADLNTNIEDEGSSFYGVSSQYESPENMIITCSTKVCSFGKQV
Sbjct: 239 KDLFERGPSNAFFLVKFWADLNTNIEDEGSSFYGVSSQYESPENMIITCSTKVCSFGKQV 298
Query: 213 VEKVETEYARYENGHYSYRIHRSPLCEYMINFIHKLKHLPEKYMMNSVLENFTILQVVTN 272
VEKVETEYARYENGHYSYRIHRSPLCEYMINFIHKLKHLPEKYMMNSVLENFTILQVVTN
Sbjct: 299 VEKVETEYARYENGHYSYRIHRSPLCEYMINFIHKLKHLPEKYMMNSVLENFTILQVVTN 358
Query: 273 RDTQETLLCIAYVFEVSASEHGAQHHIYRLVKE 305
RDTQETLLCIAYVFEVSASEHGAQHHIYRLVKE
Sbjct: 359 RDTQETLLCIAYVFEVSASEHGAQHHIYRLVKE 391
>gi|11386151 TEA domain family member 1 [Homo sapiens]
Length = 411
Score = 458 bits (1178), Expect = e-129
Identities = 226/310 (72%), Positives = 258/310 (83%), Gaps = 10/310 (3%)
Query: 1 MAAMSSAQIISATAFHSSMALAR--GPGRPAVSGFWQGALP-GQAGTSHDVKPFSQQTYA 57
MAAMSSAQI+SATA H+ + L P P GFW G + GQ G+S DVKPF QQ Y
Sbjct: 107 MAAMSSAQIVSATAIHNKLGLPGIPRPTFPGAPGFWPGMIQTGQPGSSQDVKPFVQQAYP 166
Query: 58 VQPPL--PLPGFESPAGPAPSPSAPPAPPWQGRSVASSKLWMLEFSAFLEQQQDPDTYNK 115
+QP + P+PGFE + PAPS P WQGRS+ ++KL ++EFSAFLEQQ+DPD+YNK
Sbjct: 167 IQPAVTAPIPGFEPASAPAPS-----VPAWQGRSIGTTKLRLVEFSAFLEQQRDPDSYNK 221
Query: 116 HLFVHIGQSSPSYSDPYLEAVDIRQIYDKFPEKKGGLKDLFERGPSNAFFLVKFWADLNT 175
HLFVHIG ++ SYSDP LE+VDIRQIYDKFPEKKGGLK+LF +GP NAFFLVKFWADLN
Sbjct: 222 HLFVHIGHANHSYSDPLLESVDIRQIYDKFPEKKGGLKELFGKGPQNAFFLVKFWADLNC 281
Query: 176 NIEDEGSSFYGVSSQYESPENMIITCSTKVCSFGKQVVEKVETEYARYENGHYSYRIHRS 235
NI+D+ +FYGV+SQYES ENM +TCSTKVCSFGKQVVEKVETEYAR+ENG + YRI+RS
Sbjct: 282 NIQDDAGAFYGVTSQYESSENMTVTCSTKVCSFGKQVVEKVETEYARFENGRFVYRINRS 341
Query: 236 PLCEYMINFIHKLKHLPEKYMMNSVLENFTILQVVTNRDTQETLLCIAYVFEVSASEHGA 295
P+CEYMINFIHKLKHLPEKYMMNSVLENFTIL VVTNRDTQETLLC+A VFEVS SEHGA
Sbjct: 342 PMCEYMINFIHKLKHLPEKYMMNSVLENFTILLVVTNRDTQETLLCMACVFEVSNSEHGA 401
Query: 296 QHHIYRLVKE 305
QHHIYRLVK+
Sbjct: 402 QHHIYRLVKD 411
>gi|42490753 TEA domain family member 3 [Homo sapiens]
Length = 435
Score = 416 bits (1068), Expect = e-116
Identities = 211/313 (67%), Positives = 252/313 (80%), Gaps = 11/313 (3%)
Query: 1 MAAMSSAQIISATAFHSSMALARGPGRPAV----SGFWQGA--LPGQAGTSHDVKPFSQQ 54
MA+MSSAQI+SA+ + + P AV S FW L Q G S D+KPF+Q
Sbjct: 126 MASMSSAQIVSASVLQNKFS-PPSPLPQAVFSTSSRFWSSPPLLGQQPGPSQDIKPFAQP 184
Query: 55 TYAVQPPLP--LPGFESPAGPAPSPSAPPAPPWQGRSVASSKLWMLEFSAFLEQQQDPDT 112
Y +QPPLP L +E P P PS +A P WQ R++ASS+L +LE+SAF+E Q+DPDT
Sbjct: 185 AYPIQPPLPPTLSSYE-PLAPLPSAAAS-VPVWQDRTIASSRLRLLEYSAFMEVQRDPDT 242
Query: 113 YNKHLFVHIGQSSPSYSDPYLEAVDIRQIYDKFPEKKGGLKDLFERGPSNAFFLVKFWAD 172
Y+KHLFVHIGQ++P++SDP LEAVD+RQIYDKFPEKKGGLK+L+E+GP NAFFLVKFWAD
Sbjct: 243 YSKHLFVHIGQTNPAFSDPPLEAVDVRQIYDKFPEKKGGLKELYEKGPPNAFFLVKFWAD 302
Query: 173 LNTNIEDEGSSFYGVSSQYESPENMIITCSTKVCSFGKQVVEKVETEYARYENGHYSYRI 232
LN+ I++ +FYGVSSQY S ++M I+ STKVCSFGKQVVEKVETEYAR ENG + YRI
Sbjct: 303 LNSTIQEGPGAFYGVSSQYSSADSMTISVSTKVCSFGKQVVEKVETEYARLENGRFVYRI 362
Query: 233 HRSPLCEYMINFIHKLKHLPEKYMMNSVLENFTILQVVTNRDTQETLLCIAYVFEVSASE 292
HRSP+CEYMINFIHKLKHLPEKYMMNSVLENFTILQVVT+RD+QETLL IA+VFEVS SE
Sbjct: 363 HRSPMCEYMINFIHKLKHLPEKYMMNSVLENFTILQVVTSRDSQETLLVIAFVFEVSTSE 422
Query: 293 HGAQHHIYRLVKE 305
HGAQHH+Y+LVK+
Sbjct: 423 HGAQHHVYKLVKD 435
>gi|20070103 TEA domain family member 2 [Homo sapiens]
Length = 447
Score = 363 bits (931), Expect = e-100
Identities = 186/318 (58%), Positives = 227/318 (71%), Gaps = 15/318 (4%)
Query: 1 MAAMSSAQIISATAFHSSMALARGPGRPAVSGFWQGALPGQAGTSHDVKPFSQQTYAVQ- 59
MA MSSAQ+ISA + + + GP + FW G G DVKPFSQ + +
Sbjct: 132 MATMSSAQLISAPSLQAKLG-PTGPQASELFQFWSGG-SGPPWNVPDVKPFSQTPFTLSL 189
Query: 60 --PPLPLPGFESPAGPAPSPSAPPAPP-WQGRSVASSKLWMLEFSAFLEQQQDPDTYNKH 116
P LPG+E P +P P P+PP WQ R + +++L ++EFSAF+E D+Y +H
Sbjct: 190 TPPSTDLPGYEPPQALSPLPPPTPSPPAWQARGLGTARLQLVEFSAFVEPPDAVDSYQRH 249
Query: 117 LFVHIGQSSPSYSDPYLEAVDIRQIYDKFPEKKGGLKDLFERGPSNAFFLVKFWADLNTN 176
LFVHI Q PS P LE+VD+RQIYDKFPEKKGGL++L++RGP +AFFLVKFWADLN
Sbjct: 250 LFVHISQHCPSPGAPPLESVDVRQIYDKFPEKKGGLRELYDRGPPHAFFLVKFWADLNWG 309
Query: 177 IEDE---------GSSFYGVSSQYESPENMIITCSTKVCSFGKQVVEKVETEYARYENGH 227
E FYGVSSQYES E+M +TCS+KVCSFGKQVVEKVETE A+ E+G
Sbjct: 310 PSGEEAGAGGSISSGGFYGVSSQYESLEHMTLTCSSKVCSFGKQVVEKVETERAQLEDGR 369
Query: 228 YSYRIHRSPLCEYMINFIHKLKHLPEKYMMNSVLENFTILQVVTNRDTQETLLCIAYVFE 287
+ YR+ RSP+CEY++NF+HKL+ LPE+YMMNSVLENFTILQVVTNRDTQE LLC AYVFE
Sbjct: 370 FVYRLLRSPMCEYLVNFLHKLRQLPERYMMNSVLENFTILQVVTNRDTQELLLCTAYVFE 429
Query: 288 VSASEHGAQHHIYRLVKE 305
VS SE GAQHHIYRLV++
Sbjct: 430 VSTSERGAQHHIYRLVRD 447
>gi|12751477 forkhead box L2 [Homo sapiens]
Length = 376
Score = 39.7 bits (91), Expect = 0.003
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
Query: 5 SSAQIISATAFHSSMALARGPGRPAVSGFWQGALPGQAGTSHDVKPFSQQTYAVQPPLPL 64
+S Q+ +A A ++ A A GPG P + + G AG + P+++ PP +
Sbjct: 216 ASCQMAAAAAAAAAAAAAAGPGSPGAAA----VVKGLAGPAASYGPYTRVQSMALPPGVV 271
Query: 65 PGFESPAGPAPSPSAPPAPP 84
+ GP P+APP PP
Sbjct: 272 NSYNGLGGP---PAAPPPPP 288
>gi|90819237 myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); translocated to, 4 isoform 1 [Homo
sapiens]
Length = 1834
Score = 38.1 bits (87), Expect = 0.010
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 6/55 (10%)
Query: 63 PLPGFESPAGPAPSPSAPPAPPWQGRS------VASSKLWMLEFSAFLEQQQDPD 111
PLP P P+P+P APP PP + S ++ L+ +F A+ E++++ D
Sbjct: 1697 PLPRDYEPPSPSPAPGAPPPPPQRNASYLKTQVLSPDSLFTAKFVAYNEEEEEED 1751
>gi|239757425 PREDICTED: hypothetical protein XP_002345433 [Homo
sapiens]
Length = 67
Score = 37.7 bits (86), Expect = 0.013
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 33 FWQGALPGQAGTSHDVKPFSQQTYAVQPPLPLPGFESPAGPAPSPSAPPAPPWQGRS 89
F+ AL G AG D S PPL L PA P+P+ +A +PPW+G +
Sbjct: 3 FFSRALGGTAG-DEDSGSASAPRRRFGPPLALRAAARPAAPSPAAAAAASPPWRGEA 58
>gi|239751942 PREDICTED: hypothetical protein [Homo sapiens]
Length = 67
Score = 37.7 bits (86), Expect = 0.013
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 33 FWQGALPGQAGTSHDVKPFSQQTYAVQPPLPLPGFESPAGPAPSPSAPPAPPWQGRS 89
F+ AL G AG D S PPL L PA P+P+ +A +PPW+G +
Sbjct: 3 FFSRALGGTAG-DEDSGSASAPRRRFGPPLALRAAARPAAPSPAAAAAASPPWRGEA 58
>gi|239746425 PREDICTED: hypothetical protein XP_002344219 [Homo
sapiens]
Length = 67
Score = 37.7 bits (86), Expect = 0.013
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 33 FWQGALPGQAGTSHDVKPFSQQTYAVQPPLPLPGFESPAGPAPSPSAPPAPPWQGRS 89
F+ AL G AG D S PPL L PA P+P+ +A +PPW+G +
Sbjct: 3 FFSRALGGTAG-DEDSGSASAPRRRFGPPLALRAAARPAAPSPAAAAAASPPWRGEA 58
>gi|154355000 KH-type splicing regulatory protein [Homo sapiens]
Length = 711
Score = 36.6 bits (83), Expect = 0.028
Identities = 24/61 (39%), Positives = 31/61 (50%), Gaps = 13/61 (21%)
Query: 56 YAVQPPLPLPGFESPAGPAPSPSAPPA------PPWQGRSVASSKLWMLEFSAFLEQQQD 109
Y QPP P+P GPAP+P+APPA PP G+S +K W + +Q Q
Sbjct: 583 YYQQPPGPVP------GPAPAPAAPPAQGEPPQPPPTGQS-DYTKAWEEYYKKIGQQPQQ 635
Query: 110 P 110
P
Sbjct: 636 P 636
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 36.6 bits (83), Expect = 0.028
Identities = 28/70 (40%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Query: 18 SMALARGPGRPAVSGFWQGALPGQ-AGTSHDVKPFSQQTYAVQPPLPLPGFESPAGPAPS 76
S A A GP + V G +P Q AG K +QQT +PP LPG PA P P
Sbjct: 429 SPAKAPGPTKTPVQQPGPGKIPAQQAGPG---KTSAQQTGPTKPPSQLPG---PAKPPPQ 482
Query: 77 PSAPPAPPWQ 86
P PP Q
Sbjct: 483 QPGPAKPPPQ 492
Score = 32.7 bits (73), Expect = 0.41
Identities = 24/82 (29%), Positives = 32/82 (39%), Gaps = 9/82 (10%)
Query: 4 MSSAQIISATAFHSSMALARGP-GRPAVSGFWQGALPGQAGTSHDVKPFSQQTYAVQPPL 62
+S+ S F ++ P G P+VS P +S D+ + QPP
Sbjct: 2356 LSTTYFTSGETFGQEKPASQLPSGSPSVSSLPAKPRPFFRSSSLDI--------SAQPPP 2407
Query: 63 PLPGFESPAGPAPSPSAPPAPP 84
P P P P P P PP PP
Sbjct: 2408 PPPPPPPPPPPPPPPPPPPLPP 2429
Score = 32.0 bits (71), Expect = 0.70
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 49 KPFSQQTYAVQPPLPLPGFESPAGPAPSPSAPPA 82
KP +QQ V+PP+ PG P P+ PPA
Sbjct: 340 KPLAQQPGTVKPPVQPPGTTKPPAQPLGPAKPPA 373
Score = 32.0 bits (71), Expect = 0.70
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Query: 39 PGQAGTSHDVKPFSQQTYAVQPPLPLPGFESPAGPAPSPSAPPA 82
P Q G + KP QQ + +PP PG P+ PSP+ P A
Sbjct: 511 PQQPGPA---KPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSA 551
Score = 30.4 bits (67), Expect = 2.0
Identities = 15/43 (34%), Positives = 20/43 (46%)
Query: 49 KPFSQQTYAVQPPLPLPGFESPAGPAPSPSAPPAPPWQGRSVA 91
KP +Q +PP G E P+ P P A PP G++ A
Sbjct: 360 KPPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPA 402
Score = 30.0 bits (66), Expect = 2.7
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 15/63 (23%)
Query: 24 GPGRPAVSGFWQGALPGQAGTSHDVKPFSQQTYAVQPPLPLPGFESPAGPAPSPSAPPAP 83
GP +P P Q G++ KP SQQ + +PP PG PA P+P P
Sbjct: 485 GPAKPP---------PQQPGSA---KPPSQQPGSTKPPPQQPG---PAKPSPQQPGSTKP 529
Query: 84 PWQ 86
P Q
Sbjct: 530 PSQ 532
Score = 29.3 bits (64), Expect = 4.5
Identities = 24/67 (35%), Positives = 29/67 (43%), Gaps = 13/67 (19%)
Query: 20 ALARGPGRPAVSGFWQGALPGQAGTSHDVKPFSQQTYAVQPPLPLPGFESPA---GPAPS 76
ALA+ PG G PG A KP +QQ +P PG +SPA GP +
Sbjct: 390 ALAQPPG----VGKTPAQQPGPA------KPPTQQVGTPKPLAQQPGLQSPAKAPGPTKT 439
Query: 77 PSAPPAP 83
P P P
Sbjct: 440 PVQQPGP 446
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 36.6 bits (83), Expect = 0.028
Identities = 28/70 (40%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
Query: 18 SMALARGPGRPAVSGFWQGALPGQ-AGTSHDVKPFSQQTYAVQPPLPLPGFESPAGPAPS 76
S A A GP + V G +P Q AG K +QQT +PP LPG PA P P
Sbjct: 429 SPAKAPGPTKTPVQQPGPGKIPAQQAGPG---KTSAQQTGPTKPPSQLPG---PAKPPPQ 482
Query: 77 PSAPPAPPWQ 86
P PP Q
Sbjct: 483 QPGPAKPPPQ 492
Score = 32.7 bits (73), Expect = 0.41
Identities = 24/82 (29%), Positives = 32/82 (39%), Gaps = 9/82 (10%)
Query: 4 MSSAQIISATAFHSSMALARGP-GRPAVSGFWQGALPGQAGTSHDVKPFSQQTYAVQPPL 62
+S+ S F ++ P G P+VS P +S D+ + QPP
Sbjct: 2356 LSTTYFTSGETFGQEKPASQLPSGSPSVSSLPAKPRPFFRSSSLDI--------SAQPPP 2407
Query: 63 PLPGFESPAGPAPSPSAPPAPP 84
P P P P P P PP PP
Sbjct: 2408 PPPPPPPPPPPPPPPPPPPLPP 2429
Score = 32.0 bits (71), Expect = 0.70
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 49 KPFSQQTYAVQPPLPLPGFESPAGPAPSPSAPPA 82
KP +QQ V+PP+ PG P P+ PPA
Sbjct: 340 KPLAQQPGTVKPPVQPPGTTKPPAQPLGPAKPPA 373
Score = 32.0 bits (71), Expect = 0.70
Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Query: 39 PGQAGTSHDVKPFSQQTYAVQPPLPLPGFESPAGPAPSPSAPPA 82
P Q G + KP QQ + +PP PG P+ PSP+ P A
Sbjct: 511 PQQPGPA---KPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSA 551
Score = 30.4 bits (67), Expect = 2.0
Identities = 15/43 (34%), Positives = 20/43 (46%)
Query: 49 KPFSQQTYAVQPPLPLPGFESPAGPAPSPSAPPAPPWQGRSVA 91
KP +Q +PP G E P+ P P A PP G++ A
Sbjct: 360 KPPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPA 402
Score = 30.0 bits (66), Expect = 2.7
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 15/63 (23%)
Query: 24 GPGRPAVSGFWQGALPGQAGTSHDVKPFSQQTYAVQPPLPLPGFESPAGPAPSPSAPPAP 83
GP +P P Q G++ KP SQQ + +PP PG PA P+P P
Sbjct: 485 GPAKPP---------PQQPGSA---KPPSQQPGSTKPPPQQPG---PAKPSPQQPGSTKP 529
Query: 84 PWQ 86
P Q
Sbjct: 530 PSQ 532
Score = 29.3 bits (64), Expect = 4.5
Identities = 24/67 (35%), Positives = 29/67 (43%), Gaps = 13/67 (19%)
Query: 20 ALARGPGRPAVSGFWQGALPGQAGTSHDVKPFSQQTYAVQPPLPLPGFESPA---GPAPS 76
ALA+ PG G PG A KP +QQ +P PG +SPA GP +
Sbjct: 390 ALAQPPG----VGKTPAQQPGPA------KPPTQQVGTPKPLAQQPGLQSPAKAPGPTKT 439
Query: 77 PSAPPAP 83
P P P
Sbjct: 440 PVQQPGP 446
>gi|194578898 hypothetical protein LOC100170841 [Homo sapiens]
Length = 379
Score = 36.6 bits (83), Expect = 0.028
Identities = 18/38 (47%), Positives = 21/38 (55%), Gaps = 5/38 (13%)
Query: 52 SQQTYAVQPPLPLPGFESPAGPAPSP-----SAPPAPP 84
S ++A PP P PG E GPA SP S PP+PP
Sbjct: 149 STTSFASAPPRPAPGLEPQRGPAASPPQEPSSRPPSPP 186
>gi|62945417 dystrophia myotonica-containing WD repeat motif
protein [Homo sapiens]
Length = 674
Score = 36.6 bits (83), Expect = 0.028
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Query: 32 GFWQGALPGQAGTSHDVKPFSQQTYAVQPPLPLPGFESPAGP---APSPSAPPAPPWQGR 88
GF++ LPG +Q QPP P PG S +GP P+ S PPA P G
Sbjct: 31 GFYK-LLPGDGAARRSGPASAQTPVPPQPPQPPPGPASASGPGAAGPASSPPPAGPGPGP 89
Query: 89 SVASSKL 95
++ + +L
Sbjct: 90 ALPAVRL 96
>gi|162329583 cleavage and polyadenylation specific factor 6, 68 kD
subunit [Homo sapiens]
Length = 551
Score = 36.2 bits (82), Expect = 0.037
Identities = 13/25 (52%), Positives = 15/25 (60%)
Query: 60 PPLPLPGFESPAGPAPSPSAPPAPP 84
PP P+PG+ P GP P PP PP
Sbjct: 296 PPPPVPGYGPPPGPPPPQQGPPPPP 320
Score = 33.5 bits (75), Expect = 0.24
Identities = 22/62 (35%), Positives = 23/62 (37%), Gaps = 2/62 (3%)
Query: 24 GPGRPAVSGFWQGA--LPGQAGTSHDVKPFSQQTYAVQPPLPLPGFESPAGPAPSPSAPP 81
G GR G G PG AG PF +PPL PG P GP P P
Sbjct: 201 GRGRGRFPGAVPGGDRFPGPAGPGGPPPPFPAGQTPPRPPLGPPGPPGPPGPPPPGQVLP 260
Query: 82 AP 83
P
Sbjct: 261 PP 262
Score = 30.0 bits (66), Expect = 2.7
Identities = 11/25 (44%), Positives = 13/25 (52%)
Query: 60 PPLPLPGFESPAGPAPSPSAPPAPP 84
PP P P ++P P P PP PP
Sbjct: 226 PPPPFPAGQTPPRPPLGPPGPPGPP 250
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 36.2 bits (82), Expect = 0.037
Identities = 26/73 (35%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 25 PGRPAVSGFWQGALPGQAGTSHDVKPFSQQTYAVQPPLPLPGFESPAGPAPSPSAPPAP- 83
PG P F G PG GTS P T+ P PG PAGP+ PS PP P
Sbjct: 659 PGSPP--SFRTGTPPGYRGTS---PPAGPGTFKPGSPTVGPGPLPPAGPSGLPSLPPPPA 713
Query: 84 -PWQGRSVASSKL 95
P G ++++++
Sbjct: 714 APASGPPLSATQI 726
>gi|55750041 atrophin-1 [Homo sapiens]
Length = 1190
Score = 36.2 bits (82), Expect = 0.037
Identities = 26/73 (35%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 25 PGRPAVSGFWQGALPGQAGTSHDVKPFSQQTYAVQPPLPLPGFESPAGPAPSPSAPPAP- 83
PG P F G PG GTS P T+ P PG PAGP+ PS PP P
Sbjct: 659 PGSPP--SFRTGTPPGYRGTS---PPAGPGTFKPGSPTVGPGPLPPAGPSGLPSLPPPPA 713
Query: 84 -PWQGRSVASSKL 95
P G ++++++
Sbjct: 714 APASGPPLSATQI 726
>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
Length = 1263
Score = 35.0 bits (79), Expect = 0.083
Identities = 18/47 (38%), Positives = 19/47 (40%)
Query: 38 LPGQAGTSHDVKPFSQQTYAVQPPLPLPGFESPAGPAPSPSAPPAPP 84
LPG AG P + PP PLPG P P P P PP
Sbjct: 685 LPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPP 731
Score = 34.7 bits (78), Expect = 0.11
Identities = 31/93 (33%), Positives = 38/93 (40%), Gaps = 25/93 (26%)
Query: 1 MAAMSSAQIISATAFHSSMALARGPGRPAVSGFWQGALPGQAGTSHDVKPFSQQTYAVQP 60
MA++S+A I + S R P PA LPG +GT + P
Sbjct: 553 MASLSAAAITVPPSVPS-----RAPVPPAPP------LPGDSGT-------------IIP 588
Query: 61 PLPLPGFESPAGPAPSPSAPPAPPWQGRSVASS 93
P P PG +S P P P PP PP G SS
Sbjct: 589 PPPAPG-DSTTPPPPPPPPPPPPPLPGGVCISS 620
Score = 32.7 bits (73), Expect = 0.41
Identities = 25/78 (32%), Positives = 27/78 (34%), Gaps = 11/78 (14%)
Query: 21 LARGPGRPAVSGFWQGA-------LPGQAGTSHDVKPFSQQTYAVQPPLPLPGFESPAGP 73
L G G P+ S G LPG A P PP PLPG P
Sbjct: 648 LPEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPP 707
Query: 74 AP----SPSAPPAPPWQG 87
P P PP PP+ G
Sbjct: 708 PPPLPGGPGIPPPPPFPG 725
Score = 32.0 bits (71), Expect = 0.70
Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Query: 38 LPGQAGTSHDVKPFSQQTYAVQPPLPLPGFESPAGPAPSPSAPPAPPW 85
LPG+AG P + PP P PG P P PP PP+
Sbjct: 698 LPGEAGMPPPPPPLPGGP-GIPPPPPFPGGPGIPPPPPGMGMPPPPPF 744
Score = 29.3 bits (64), Expect = 4.5
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 5/54 (9%)
Query: 37 ALPGQAGTSHDVKPFSQQTYAVQPPLPLP---GFESPAGPAPSPSAPPAPPWQG 87
+LPG GT+ P + PP PLP G SP+ + PP PP G
Sbjct: 623 SLPG--GTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPGGTAIPPPPPLPG 674
>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
Length = 1272
Score = 35.0 bits (79), Expect = 0.083
Identities = 18/47 (38%), Positives = 19/47 (40%)
Query: 38 LPGQAGTSHDVKPFSQQTYAVQPPLPLPGFESPAGPAPSPSAPPAPP 84
LPG AG P + PP PLPG P P P P PP
Sbjct: 694 LPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPGIPP 740
Score = 34.7 bits (78), Expect = 0.11
Identities = 31/93 (33%), Positives = 38/93 (40%), Gaps = 25/93 (26%)
Query: 1 MAAMSSAQIISATAFHSSMALARGPGRPAVSGFWQGALPGQAGTSHDVKPFSQQTYAVQP 60
MA++S+A I + S R P PA LPG +GT + P
Sbjct: 562 MASLSAAAITVPPSVPS-----RAPVPPAPP------LPGDSGT-------------IIP 597
Query: 61 PLPLPGFESPAGPAPSPSAPPAPPWQGRSVASS 93
P P PG +S P P P PP PP G SS
Sbjct: 598 PPPAPG-DSTTPPPPPPPPPPPPPLPGGVCISS 629
Score = 32.7 bits (73), Expect = 0.41
Identities = 25/78 (32%), Positives = 27/78 (34%), Gaps = 11/78 (14%)
Query: 21 LARGPGRPAVSGFWQGA-------LPGQAGTSHDVKPFSQQTYAVQPPLPLPGFESPAGP 73
L G G P+ S G LPG A P PP PLPG P
Sbjct: 657 LPEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPP 716
Query: 74 AP----SPSAPPAPPWQG 87
P P PP PP+ G
Sbjct: 717 PPPLPGGPGIPPPPPFPG 734
Score = 32.0 bits (71), Expect = 0.70
Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Query: 38 LPGQAGTSHDVKPFSQQTYAVQPPLPLPGFESPAGPAPSPSAPPAPPW 85
LPG+AG P + PP P PG P P PP PP+
Sbjct: 707 LPGEAGMPPPPPPLPGGP-GIPPPPPFPGGPGIPPPPPGMGMPPPPPF 753
Score = 29.3 bits (64), Expect = 4.5
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 5/54 (9%)
Query: 37 ALPGQAGTSHDVKPFSQQTYAVQPPLPLP---GFESPAGPAPSPSAPPAPPWQG 87
+LPG GT+ P + PP PLP G SP+ + PP PP G
Sbjct: 632 SLPG--GTAISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPGGTAIPPPPPLPG 683
>gi|112421108 capicua homolog [Homo sapiens]
Length = 1608
Score = 35.0 bits (79), Expect = 0.083
Identities = 27/91 (29%), Positives = 37/91 (40%), Gaps = 10/91 (10%)
Query: 13 TAFHSSMALARGPGRPAVSGFWQGALPGQAGTSHDVK----PFSQQTYAVQPPLPLPGFE 68
T S GP P G Q G+AG V+ QQ P P PG +
Sbjct: 790 TTAGSGAGAGSGPNGPVPLGILQPGALGKAGGITQVQYILPTLPQQLQVAPAPAPAPGTK 849
Query: 69 --SPAGPAPSPS----APPAPPWQGRSVASS 93
+P+GPAP+ S PP G+ +A++
Sbjct: 850 AAAPSGPAPTTSIRFTLPPGTSTNGKVLAAT 880
Score = 31.2 bits (69), Expect = 1.2
Identities = 20/51 (39%), Positives = 20/51 (39%), Gaps = 5/51 (9%)
Query: 39 PGQAGTSHDVKPFSQQ-TYAVQPPLPLPGFESPAGP----APSPSAPPAPP 84
P AG P S T PPLP P P P AP PS PP P
Sbjct: 1551 PSPAGGPDPTSPSSDSGTAQAAPPLPPPPESGPGQPGWEGAPQPSPPPPGP 1601
>gi|19923312 v-myc myelocytomatosis viral related oncogene,
neuroblastoma derived [Homo sapiens]
Length = 464
Score = 34.7 bits (78), Expect = 0.11
Identities = 24/80 (30%), Positives = 35/80 (43%)
Query: 13 TAFHSSMALARGPGRPAVSGFWQGALPGQAGTSHDVKPFSQQTYAVQPPLPLPGFESPAG 72
TA ++ + G PA G A G+AG + + V P + P +
Sbjct: 142 TAGSTAQSPGAGAASPAGRGHGGAAGAGRAGAALPAELAHPAAECVDPAVVFPFPVNKRE 201
Query: 73 PAPSPSAPPAPPWQGRSVAS 92
PAP P+AP + P G +VAS
Sbjct: 202 PAPVPAAPASAPAAGPAVAS 221
>gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]
Length = 1682
Score = 34.3 bits (77), Expect = 0.14
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 57 AVQPPLPLPGFESPAGPAPSPSAPPAPPWQGRSVAS 92
A+ PP PL F P+ P P P PP+P +S+AS
Sbjct: 774 ALPPPPPLAKFPPPSQPQPPPPPPPSPASLLKSLAS 809
Score = 28.5 bits (62), Expect = 7.7
Identities = 17/36 (47%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Query: 52 SQQTYAVQPPLPLPGFESPAGPAPSPSAPPAPPWQG 87
S+QT + P LPLP P P P P PP PP G
Sbjct: 235 SEQT-GLPPGLPLPPPPLPPPPPPPP--PPPPPLPG 267
>gi|38327539 inositol polyphosphate-5-phosphatase E [Homo sapiens]
Length = 644
Score = 34.3 bits (77), Expect = 0.14
Identities = 51/205 (24%), Positives = 82/205 (40%), Gaps = 23/205 (11%)
Query: 35 QGALPG-----QAGTSHDVKPFSQQTYAVQPPLPLPGFESPAGPAPSPSAPPAPPWQGRS 89
QG LPG +AG+ D A P G + PA AP PPA P R+
Sbjct: 24 QGQLPGAPPAQRAGSPPDAPGSESPALACSTPATPSGEDPPARAAPIAPRPPARPRLERA 83
Query: 90 VA-SSKLWMLEFSAFLEQQQDPDTYN-----KHLFVHIGQSSPSYS-DPYLEAVDIRQIY 142
++ K W F Q+D + N + G +P++S P + +++I
Sbjct: 84 LSLDDKGWRRR--RFRGSQEDLEARNGTSPSRGSVQSEGPGAPAHSCSPPCLSTSLQEI- 140
Query: 143 DKFPEKKGGLKDLFERG-PSNAFFLVKFWADLNTNIEDEGSSFYGVSSQYES--PENMII 199
P+ +G L ERG PS+ + A + N+ ++ G S + S P
Sbjct: 141 ---PKSRGVLSS--ERGSPSSGGNPLSGVASSSPNLPHRDAAVAGSSPRLPSLLPPRPPP 195
Query: 200 TCSTKVCSFGKQVVEKVETEYARYE 224
S + S + KV+++ A Y+
Sbjct: 196 ALSLDIASDSLRTANKVDSDLADYK 220
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 33.9 bits (76), Expect = 0.18
Identities = 36/113 (31%), Positives = 45/113 (39%), Gaps = 10/113 (8%)
Query: 25 PGRPAVSGFWQGALPGQAGTSHDVKPFSQQTYAVQPPLPLPGFESPAGPAPSPSAPPAPP 84
P +P + G GQ G H P + + QP P P F P P+ A P P
Sbjct: 2206 PAQPPMLGASSRPGAGQPGEFHTTPPGTPRH---QPSTPDP-FLKPRCPSLDNLAVPESP 2261
Query: 85 WQGRSVASSKLWMLEFSAFLEQQQDPDTYNKHLFVHIGQSSPSYSDPYLEAVD 137
G AS L L F E ++ + + L G SSPSY P L VD
Sbjct: 2262 GVGGGKASEPL--LSPPPFGESRKALEVKKEEL----GASSPSYGPPNLGFVD 2308
>gi|4759208 TAO kinase 2 isoform 1 [Homo sapiens]
Length = 1049
Score = 33.9 bits (76), Expect = 0.18
Identities = 29/72 (40%), Positives = 32/72 (44%), Gaps = 5/72 (6%)
Query: 17 SSMALARGPGRPAVSGFWQGALPGQAGTSHDVKPFSQQTYAVQPPLPLPGFESPAGPAPS 76
SSMAL P A G+ P A S V P S ++ PP P G PA PS
Sbjct: 916 SSMALGGIPAEAAAQGY-PAPPPAPAWPSRPV-PRSGAHWSHGPPPP--GMPPPAWRQPS 971
Query: 77 PSAPPAPP-WQG 87
APP PP W G
Sbjct: 972 LLAPPGPPNWLG 983
>gi|119829187 alpha 1 type XVII collagen [Homo sapiens]
Length = 1497
Score = 33.9 bits (76), Expect = 0.18
Identities = 27/78 (34%), Positives = 34/78 (43%), Gaps = 5/78 (6%)
Query: 13 TAFHSSMALARGPGRP--AVSGFWQGALPGQAGTSHDVKPFSQQTYAVQPPLPLPGFESP 70
T+ SSM GP P A+ PG AG + P Q+ +Q P PG P
Sbjct: 810 TSEGSSMLTVPGPPGPPGAMGPPGPPGAPGPAGPAG--LPGHQEVLNLQGPPGPPGPRGP 867
Query: 71 AGPA-PSPSAPPAPPWQG 87
GP+ P P P PP +G
Sbjct: 868 PGPSIPGPPGPRGPPGEG 885
>gi|57165375 glutamate receptor, ionotropic, N-methyl
D-aspartate-associated protein 1 [Homo sapiens]
Length = 371
Score = 33.9 bits (76), Expect = 0.18
Identities = 23/63 (36%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Query: 25 PGRPAVSGFWQGALPGQAGTSHDVKPFSQQTYAVQPPLPLPGFESPAGPAPSPSAPPAPP 84
PG P +Q + GQ G H P+ Q Y Q P P G+ P GP P P P
Sbjct: 38 PGAPYPQPPFQPSPYGQPGYPHGPSPYPQGGYP-QGPYPQGGY--PQGPYPQEGYPQGPY 94
Query: 85 WQG 87
QG
Sbjct: 95 PQG 97
Score = 29.3 bits (64), Expect = 4.5
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 6/60 (10%)
Query: 24 GPGRPAVSGFWQGALPGQAGTSHDVKPFSQQTYAVQPPLPLPGFESPAGPAPSPSAPPAP 83
GP G+ QG P Q G + P+ Q+ Y Q P P G+ P GP P PP P
Sbjct: 60 GPSPYPQGGYPQGPYP-QGG--YPQGPYPQEGYP-QGPYPQGGY--PQGPYPQSPFPPNP 113
>gi|57165373 glutamate receptor, ionotropic, N-methyl
D-aspartate-associated protein 1 [Homo sapiens]
Length = 371
Score = 33.9 bits (76), Expect = 0.18
Identities = 23/63 (36%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
Query: 25 PGRPAVSGFWQGALPGQAGTSHDVKPFSQQTYAVQPPLPLPGFESPAGPAPSPSAPPAPP 84
PG P +Q + GQ G H P+ Q Y Q P P G+ P GP P P P
Sbjct: 38 PGAPYPQPPFQPSPYGQPGYPHGPSPYPQGGYP-QGPYPQGGY--PQGPYPQEGYPQGPY 94
Query: 85 WQG 87
QG
Sbjct: 95 PQG 97
Score = 29.3 bits (64), Expect = 4.5
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 6/60 (10%)
Query: 24 GPGRPAVSGFWQGALPGQAGTSHDVKPFSQQTYAVQPPLPLPGFESPAGPAPSPSAPPAP 83
GP G+ QG P Q G + P+ Q+ Y Q P P G+ P GP P PP P
Sbjct: 60 GPSPYPQGGYPQGPYP-QGG--YPQGPYPQEGYP-QGPYPQGGY--PQGPYPQSPFPPNP 113
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.132 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,278,249
Number of Sequences: 37866
Number of extensions: 720629
Number of successful extensions: 9720
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 122
Number of HSP's successfully gapped in prelim test: 293
Number of HSP's that attempted gapping in prelim test: 7581
Number of HSP's gapped (non-prelim): 2096
length of query: 305
length of database: 18,247,518
effective HSP length: 102
effective length of query: 203
effective length of database: 14,385,186
effective search space: 2920192758
effective search space used: 2920192758
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.