Guide to the Human Genome
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Name: CD164L2 Sequence: fasta or formatted (173aa) NCBI GI: 46409426
Description:

CD164 sialomucin-like 2

Referenced in:

Mucins
Hematopoiesis and Erythrocytes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.6         20           2
 C cysteine            7.5         13           3
 D aspartate           1.7          3           1
 E glutamate           6.9         12           2
 F phenylalanine       3.5          6           2
 G glycine             9.8         17           2
 H histidine           4.0          7           3
 I isoleucine          2.3          4           1
 K lysine              3.5          6           1
 L leucine             9.2         16           3
 M methionine          1.2          2           1
 N asparagine          1.7          3           1
 P proline             6.9         12           2
 Q glutamine           4.0          7           1
 R arginine            5.2          9           1
 S serine              5.8         10           2
 T threonine           4.0          7           2
 V valine              8.1         14           2
 W tryptophan          1.2          2           1
 Y tyrosine            1.7          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   CD164 sialomucin-like 2 
CD164                 0.125   CD164 molecule, sialomucin isoform 2 
CD164                 0.114   CD164 molecule, sialomucin isoform 3 
CD164                 0.111   CD164 molecule, sialomucin isoform 1 
CD164                 0.050   CD164 molecule, sialomucin isoform 4 
VWC2L                 0.020   von Willebrand factor C domain-containing protein 2...
LOC100133142          0.015   PREDICTED: similar to zinc finger protein 208 [Homo...
LOC100133142          0.015   PREDICTED: similar to zinc finger protein 208 [Homo...
AHDC1                 0.012   AT hook, DNA binding motif, containing 1 
TNFRSF1B              0.009   tumor necrosis factor receptor 2 precursor 
TDRD6                 0.009   tudor domain containing 6 
KCNK10                0.009   potassium channel, subfamily K, member 10 isoform 3 ...
ZNF513                0.009   zinc finger protein 513 
SOX9                  0.009   transcription factor SOX9 
RNF17                 0.009   ring finger protein 17 
HSFX2                 0.009   PREDICTED: heat shock transcription factor family, ...
ZMIZ2                 0.009   zinc finger, MIZ-type containing 2 isoform 1 
ZMIZ2                 0.009   zinc finger, MIZ-type containing 2 isoform 2 
HSFX1                 0.009   heat shock transcription factor family, X linked 1 [H...
MUC5AC                0.006   mucin 5AC 
SSFA2                 0.006   sperm specific antigen 2 isoform 1 
SSFA2                 0.006   sperm specific antigen 2 isoform 2 
MUC5B                 0.006   mucin 5, subtype B, tracheobronchial 
RIMBP3                0.006   DKFZP434H0735 protein 
PHOX2A                0.006   paired-like homeobox 2a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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