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Search of human proteins with 46409360
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|46409360 G protein-coupled receptor 148 [Homo sapiens]
(347 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|46409360 G protein-coupled receptor 148 [Homo sapiens] 701 0.0
gi|4504533 5-hydroxytryptamine (serotonin) receptor 1B [Homo sap... 72 6e-13
gi|4504535 5-hydroxytryptamine (serotonin) receptor 1D [Homo sap... 68 1e-11
gi|13236497 5-hydroxytryptamine receptor 5A [Homo sapiens] 64 2e-10
gi|4501957 alpha-1D-adrenergic receptor [Homo sapiens] 62 8e-10
gi|4557267 adrenergic, beta-3-, receptor [Homo sapiens] 60 4e-09
gi|37622910 cholinergic receptor, muscarinic 1 [Homo sapiens] 59 6e-09
gi|4501959 alpha-1B-adrenergic receptor [Homo sapiens] 57 3e-08
gi|4504545 5-hydroxytryptamine (serotonin) receptor 6 [Homo sapi... 55 7e-08
gi|55956923 5-hydroxytryptamine (serotonin) receptor 1A [Homo sa... 55 1e-07
gi|4557865 somatostatin receptor 5 [Homo sapiens] 53 5e-07
gi|4557265 beta-1-adrenergic receptor [Homo sapiens] 53 5e-07
gi|111118990 alpha-1A-adrenergic receptor isoform 4 [Homo sapiens] 52 6e-07
gi|111118992 alpha-1A-adrenergic receptor isoform 1 [Homo sapiens] 52 6e-07
gi|111118986 alpha-1A-adrenergic receptor isoform 2 [Homo sapiens] 52 6e-07
gi|111118988 alpha-1A-adrenergic receptor isoform 3 [Homo sapiens] 52 6e-07
gi|10835197 5-hydroxytryptamine (serotonin) receptor 1F [Homo sa... 52 6e-07
gi|4505445 neuropeptide Y receptor Y1 [Homo sapiens] 52 6e-07
gi|16876435 G protein-coupled receptor 101 [Homo sapiens] 52 6e-07
gi|4502819 cholinergic receptor, muscarinic 3 [Homo sapiens] 52 8e-07
gi|10880131 5-hydroxytryptamine receptor 7 isoform b [Homo sapiens] 51 2e-06
gi|10880129 5-hydroxytryptamine receptor 7 isoform d [Homo sapiens] 51 2e-06
gi|4504547 5-hydroxytryptamine receptor 7 isoform a [Homo sapiens] 51 2e-06
gi|4504541 5-hydroxytryptamine (serotonin) receptor 2C [Homo sap... 50 2e-06
gi|57165371 G protein-coupled receptor 61 [Homo sapiens] 49 5e-06
gi|29029612 pyrimidinergic receptor P2Y6 [Homo sapiens] 49 7e-06
gi|29029610 pyrimidinergic receptor P2Y6 [Homo sapiens] 49 7e-06
gi|29029608 pyrimidinergic receptor P2Y6 [Homo sapiens] 49 7e-06
gi|4758864 pyrimidinergic receptor P2Y6 [Homo sapiens] 49 7e-06
gi|15150803 opsin 4 isoform 1 [Homo sapiens] 49 9e-06
>gi|46409360 G protein-coupled receptor 148 [Homo sapiens]
Length = 347
Score = 701 bits (1808), Expect = 0.0
Identities = 347/347 (100%), Positives = 347/347 (100%)
Query: 1 MGDELAPCPVGTTAWPALIQLISKTPCMPQAASNTSLGLGDLRVPSSMLYWLFLPSSLLA 60
MGDELAPCPVGTTAWPALIQLISKTPCMPQAASNTSLGLGDLRVPSSMLYWLFLPSSLLA
Sbjct: 1 MGDELAPCPVGTTAWPALIQLISKTPCMPQAASNTSLGLGDLRVPSSMLYWLFLPSSLLA 60
Query: 61 AATLAVSPLLLVTILRNQRLRQEPHYLLPANILLSDLAYILLHMLISSSSLGGWELGRMA 120
AATLAVSPLLLVTILRNQRLRQEPHYLLPANILLSDLAYILLHMLISSSSLGGWELGRMA
Sbjct: 61 AATLAVSPLLLVTILRNQRLRQEPHYLLPANILLSDLAYILLHMLISSSSLGGWELGRMA 120
Query: 121 CGILTDAVFAACTSTILSFTAIVLHTYLAVIHPLRYLSFMSHGAAWKAVALIWLVACCFP 180
CGILTDAVFAACTSTILSFTAIVLHTYLAVIHPLRYLSFMSHGAAWKAVALIWLVACCFP
Sbjct: 121 CGILTDAVFAACTSTILSFTAIVLHTYLAVIHPLRYLSFMSHGAAWKAVALIWLVACCFP 180
Query: 181 TFLIWLSKWQDAQLEEQGASYILPPSMGTQPGCGLLVIVTYTSILCVLFLCTALIANCFW 240
TFLIWLSKWQDAQLEEQGASYILPPSMGTQPGCGLLVIVTYTSILCVLFLCTALIANCFW
Sbjct: 181 TFLIWLSKWQDAQLEEQGASYILPPSMGTQPGCGLLVIVTYTSILCVLFLCTALIANCFW 240
Query: 241 RIYAEAKTSGIWGQGYSRARGTLLIHSVLITLYVSTGVVFSLDMVLTRYHHIDSGTHTWL 300
RIYAEAKTSGIWGQGYSRARGTLLIHSVLITLYVSTGVVFSLDMVLTRYHHIDSGTHTWL
Sbjct: 241 RIYAEAKTSGIWGQGYSRARGTLLIHSVLITLYVSTGVVFSLDMVLTRYHHIDSGTHTWL 300
Query: 301 LAANSEVLMMLPRAMLPYLYLLRYRQLLGMVRGHLPSRRHQAIFTIS 347
LAANSEVLMMLPRAMLPYLYLLRYRQLLGMVRGHLPSRRHQAIFTIS
Sbjct: 301 LAANSEVLMMLPRAMLPYLYLLRYRQLLGMVRGHLPSRRHQAIFTIS 347
>gi|4504533 5-hydroxytryptamine (serotonin) receptor 1B [Homo
sapiens]
Length = 390
Score = 72.4 bits (176), Expect = 6e-13
Identities = 72/272 (26%), Positives = 118/272 (43%), Gaps = 31/272 (11%)
Query: 7 PCPVGTTAWPALIQLISKTPCMPQAASNTSLGLGDLRVPSSMLYWLFLPSSLLAAATLAV 66
P P G+ W L S A S + S L W L LLA TLA
Sbjct: 11 PPPAGSETWVPQANLSS-------APSQNCSAKDYIYQDSISLPWKVLLVMLLALITLAT 63
Query: 67 S---PLLLVTILRNQRLRQEPHYLLPANILLSDLAYILLHMLISS--SSLGGWELGRMAC 121
+ ++ T+ R ++L +YL+ A++ ++DL +L M IS+ + G W LG++ C
Sbjct: 64 TLSNAFVIATVYRTRKLHTPANYLI-ASLAVTDLLVSILVMPISTMYTVTGRWTLGQVVC 122
Query: 122 GILTDAVFAACTSTILSFTAIVLHTYLAVIHPLRYLSFMSHGAAWKAVALIWL--VACCF 179
+ CT++IL I L Y A+ + Y + + A +AL+W+ ++
Sbjct: 123 DFWLSSDITCCTASILHLCVIALDRYWAITDAVEYSAKRTPKRAAVMIALVWVFSISISL 182
Query: 180 PTFLIWLSKWQDAQLEEQGASYILPPSMGTQPGCGLLVIVTYTSILCVLFLCTALIANCF 239
P F W+ A+ EE+ + ++ ++ T S + + T L+ +
Sbjct: 183 PPFF-----WRQAKAEEEVSECVVNTDH---------ILYTVYSTVGAFYFPTLLLIALY 228
Query: 240 WRIYAEAKTSGIWGQGYSRARGTLLIHSVLIT 271
RIY EA+ S I Q +R G L + LIT
Sbjct: 229 GRIYVEAR-SRILKQTPNRT-GKRLTRAQLIT 258
>gi|4504535 5-hydroxytryptamine (serotonin) receptor 1D [Homo
sapiens]
Length = 377
Score = 68.2 bits (165), Expect = 1e-11
Identities = 58/231 (25%), Positives = 102/231 (44%), Gaps = 27/231 (11%)
Query: 28 MPQAASNTSLGLG------DLRVPSSMLYWLFLPSSLLAAATLAVSPLLLVTILRNQRLR 81
+PQ ASN SL D R ++ L + S++ AT+ + +L TIL ++L
Sbjct: 11 LPQEASNRSLNATETSEAWDPRTLQALKISLAVVLSVITLATVLSNAFVLTTILLTRKLH 70
Query: 82 QEPHYLLPANILLSDLAYILLHMLISSSSL--GGWELGRMACGILTDAVFAACTSTILSF 139
+YL+ ++ +DL +L M IS + W G++ C I + CT++IL
Sbjct: 71 TPANYLI-GSLATTDLLVSILVMPISIAYTITHTWNFGQILCDIWLSSDITCCTASILHL 129
Query: 140 TAIVLHTYLAVIHPLRYLSFMSHGAAWKAVALIWLVACCF---PTFLIWLSKWQDAQLEE 196
I L Y A+ L Y + G A +A++W ++ C P F W+ A+ +E
Sbjct: 130 CVIALDRYWAITDALEYSKRRTAGHAATMIAIVWAISICISIPPLF------WRQAKAQE 183
Query: 197 QGASYILPPSMGTQPGCGLLVIVTYTSILCVLFLCTALIANCFWRIYAEAK 247
+ + ++ S + T S ++ + L+ + RIY A+
Sbjct: 184 EMSDCLVNTSQ---------ISYTIYSTCGAFYIPSVLLIILYGRIYRAAR 225
>gi|13236497 5-hydroxytryptamine receptor 5A [Homo sapiens]
Length = 357
Score = 63.9 bits (154), Expect = 2e-10
Identities = 67/229 (29%), Positives = 101/229 (44%), Gaps = 34/229 (14%)
Query: 33 SNTSLGLGDLRVPSSMLYWLFLPSSL-----LAAATLAVSPLLLVTILRNQRLRQEPHYL 87
+N SLG DLR PSS L +F L L AAT A + L+L TILR + + PH L
Sbjct: 20 TNHSLGKDDLR-PSSPLLSVFGVLILTLLGFLVAATFAWNLLVLATILRVRTFHRVPHNL 78
Query: 88 LPANILLSDLAYILLHM---LISSSSLGGWELGRMACGILTDAVFAACTSTILSFTAIVL 144
+ A++ +SD+ L M L+ S W+LGR C + CT++I + TAI L
Sbjct: 79 V-ASMAVSDVLVAALVMPLSLVHELSGRRWQLGRRLCQLWIACDVLCCTASIWNVTAIAL 137
Query: 145 HTYLAVIHPLRYLSFMSHGAAWKAVALIWLVACCF---PTFLIWLSKWQDAQLEEQGA-- 199
Y ++ + Y + +AL W ++ P W + + E Q +
Sbjct: 138 DRYWSITRHMEYTLRTRKCVSNVMIALTWALSAVISLAPLLFGWGETYSEGSEECQVSRE 197
Query: 200 -SYILPPSMGTQPGCGLLVIVTYTSILCVLFLCTALIANCFWRIYAEAK 247
SY + ++G Y + VLF+ +W+IY AK
Sbjct: 198 PSYAVFSTVG----------AFYLPLCVVLFV--------YWKIYKAAK 228
>gi|4501957 alpha-1D-adrenergic receptor [Homo sapiens]
Length = 572
Score = 62.0 bits (149), Expect = 8e-10
Identities = 57/215 (26%), Positives = 100/215 (46%), Gaps = 23/215 (10%)
Query: 52 LFLPSSLLAAATLAVSPLLLVTILRNQRLRQEPHYLLPANILLSDL--AYILLHMLISSS 109
+FL + +L A +A + L+++++ N+ L+ +Y + N+ ++DL + +L +
Sbjct: 101 VFLAAFILMA--VAGNLLVILSVACNRHLQTVTNYFI-VNLAVADLLLSATVLPFSATME 157
Query: 110 SLGGWELGRMACGILTDAVFAACTSTILSFTAIVLHTYLAVIHPLRYLSFMSHGAAWKAV 169
LG W GR C + CT++ILS I + Y+ V H L+Y + M+ A +
Sbjct: 158 VLGFWAFGRAFCDVWAAVDVLCCTASILSLCTISVDRYVGVRHSLKYPAIMTERKAAAIL 217
Query: 170 ALIWLVACCFPTFLIWLSKWQDAQLEEQGASYILPPSMGTQPGCGLLVIVTYT--SILCV 227
AL+W+VA L W++ +PP + CG+ Y S +C
Sbjct: 218 ALLWVVALVVSVGP--LLGWKEP----------VPPD---ERFCGITEEAGYAVFSSVCS 262
Query: 228 LFLCTALIANCFWRIYAEAK-TSGIWGQGYSRARG 261
+L A+I + R+Y A+ T+ G R RG
Sbjct: 263 FYLPMAVIVVMYCRVYVVARSTTRSLEAGVKRERG 297
>gi|4557267 adrenergic, beta-3-, receptor [Homo sapiens]
Length = 408
Score = 59.7 bits (143), Expect = 4e-09
Identities = 52/180 (28%), Positives = 86/180 (47%), Gaps = 11/180 (6%)
Query: 15 WPALIQLISKTPCMPQAASNTSLGLGDLRVPSSMLYWLFLPSSLLAAATLAV---SPLLL 71
WP ++ P +P A NT+ G VP + L +LLA A LA + L++
Sbjct: 4 WPHENSSLAPWPDLPTLAPNTANTSGLPGVP----WEAALAGALLALAVLATVGGNLLVI 59
Query: 72 VTILRNQRLRQEPHYLLPANILLSDLAYILLHM--LISSSSLGGWELGRMACGILTDAVF 129
V I RL+ + + ++ +DL LL + + + G W LG C + T
Sbjct: 60 VAIAWTPRLQTMTNVFV-TSLAAADLVMGLLVVPPAATLALTGHWPLGATGCELWTSVDV 118
Query: 130 AACTSTILSFTAIVLHTYLAVIHPLRYLSFMSHGAAWKAVALIWLVACCFPTFLIWLSKW 189
T++I + A+ + YLAV +PLRY + ++ A AV L+W+V+ +F +S+W
Sbjct: 119 LCVTASIETLCALAVDRYLAVTNPLRYGALVTKRCARTAVVLVWVVSAAV-SFAPIMSQW 177
>gi|37622910 cholinergic receptor, muscarinic 1 [Homo sapiens]
Length = 460
Score = 58.9 bits (141), Expect = 6e-09
Identities = 50/202 (24%), Positives = 92/202 (45%), Gaps = 23/202 (11%)
Query: 54 LPSSLLAAATLAVSPLLLVTILRNQRLRQEPHYLLPANILLSDLAYILLHMLISSSSL-- 111
+ + LL+ AT+ + L+L++ N L+ +Y L ++ +DL M + ++ L
Sbjct: 30 ITTGLLSLATVTGNLLVLISFKVNTELKTVNNYFL-LSLACADLIIGTFSMNLYTTYLLM 88
Query: 112 GGWELGRMACGILTDAVFAACTSTILSFTAIVLHTYLAVIHPLRYLSFMSHGAAWKAVAL 171
G W LG +AC + + A +++++ I Y +V PL Y + + A + L
Sbjct: 89 GHWALGTLACDLWLALDYVASNASVMNLLLISFDRYFSVTRPLSYRAKRTPRRAALMIGL 148
Query: 172 IWLVACCFPTFLIW---LSKWQDAQLEE---QGASYILPPSMGTQPGCGLLVIVTYTSIL 225
WLV +F++W + WQ E G YI +QP I+T+ + +
Sbjct: 149 AWLV-----SFVLWAPAILFWQYLVGERTVLAGQCYI---QFLSQP------IITFGTAM 194
Query: 226 CVLFLCTALIANCFWRIYAEAK 247
+L ++ +WRIY E +
Sbjct: 195 AAFYLPVTVMCTLYWRIYRETE 216
>gi|4501959 alpha-1B-adrenergic receptor [Homo sapiens]
Length = 520
Score = 56.6 bits (135), Expect = 3e-08
Identities = 60/248 (24%), Positives = 114/248 (45%), Gaps = 30/248 (12%)
Query: 30 QAASNTSLGLGDLRVPSSMLYWLFLPSSLLAAATLAVSPLLLVTILRNQRLRQEPHYLLP 89
Q +SN++L L + ++ L L + +L A + + L+++++ N+ LR +Y +
Sbjct: 30 QTSSNSTLP--QLDITRAISVGLVLGAFILFA--IVGNILVILSVACNRHLRTPTNYFI- 84
Query: 90 ANILLSDL--AYILLHMLISSSSLGGWELGRMACGILTDAVFAACTSTILSFTAIVLHTY 147
N+ ++DL ++ +L + LG W LGR+ C I CT++ILS AI + Y
Sbjct: 85 VNLAMADLLLSFTVLPFSAALEVLGYWVLGRIFCDIWAAVDVLCCTASILSLCAISIDRY 144
Query: 148 LAVIHPLRYLSFMSHGAAWKAVALIWLVACCFPTFLIWLSKWQDAQLEEQGASYILPPSM 207
+ V + L+Y + ++ A A+ +W+++ + L W++ P+
Sbjct: 145 IGVRYSLQYPTLVTRRKAILALLSVWVLSTVIS--IGPLLGWKE-------------PAP 189
Query: 208 GTQPGCGLLVIVTYT--SILCVLFLCTALIANCFWRIYAEAK------TSGIWGQGYSRA 259
CG+ Y S L ++ A+I + R+Y AK +G+ + +
Sbjct: 190 NDDKECGVTEEPFYALFSSLGSFYIPLAVILVMYCRVYIVAKRTTKNLEAGVMKEMSNSK 249
Query: 260 RGTLLIHS 267
TL IHS
Sbjct: 250 ELTLRIHS 257
>gi|4504545 5-hydroxytryptamine (serotonin) receptor 6 [Homo
sapiens]
Length = 440
Score = 55.5 bits (132), Expect = 7e-08
Identities = 60/227 (26%), Positives = 93/227 (40%), Gaps = 17/227 (7%)
Query: 29 PQAASNTSLGLGDLRVPSSMLYWLFLPSSLLAAATLAVSPLLLVTILRNQRLRQEPHYLL 88
P A S + G G P W+ ++ A T A + LL+ I LR ++ L
Sbjct: 7 PTANSTPAWGAGPPSAPGGS-GWVAAALCVVIALTAAANSLLIALICTQPALRNTSNFFL 65
Query: 89 PANILLSDLAYILLHM--LISSSSLGGWELGRMACGILTDAVFAACTSTILSFTAIVLHT 146
++ SDL L+ M + ++ G W L R C + T C+++IL+ I L
Sbjct: 66 -VSLFTSDLMVGLVVMPPAMLNALYGRWVLARGLCLLWTAFDVMCCSASILNLCLISLDR 124
Query: 147 YLAVIHPLRYLSFMSHGAAWKAVALIWLVACCFPTFLIWLSKWQDAQLEEQGASYILPPS 206
YL ++ PLRY M+ A V W +A +FL L W + + PP
Sbjct: 125 YLLILSPLRYKLRMTPLRALALVLGAWSLA-ALASFLPLLLGWHE-------LGHARPPV 176
Query: 207 MGTQPGCGLLVIVTYTSILCVL--FLCTALIANCFWRIYAEAKTSGI 251
G C LL + + + L FL + I + RI A+ +
Sbjct: 177 PGQ---CRLLASLPFVLVASGLTFFLPSGAICFTYCRILLAARKQAV 220
>gi|55956923 5-hydroxytryptamine (serotonin) receptor 1A [Homo
sapiens]
Length = 422
Score = 54.7 bits (130), Expect = 1e-07
Identities = 42/165 (25%), Positives = 76/165 (46%), Gaps = 7/165 (4%)
Query: 25 TPCMPQAASNTSLGLGDLRVPSSMLYWLFLPSSLLAAATLAVSPLLLVTILRNQRLRQEP 84
+P P + G+ D+ V ++ L L +L+ A L + ++ I + L+
Sbjct: 14 SPPAPFETGGNTTGISDVTVSYQVITSLLL-GTLIFCAVLG-NACVVAAIALERSLQNVA 71
Query: 85 HYLLPANILLSDL--AYILLHMLISSSSLGGWELGRMACGILTDAVFAACTSTILSFTAI 142
+YL+ ++ ++DL + ++L M L W LG++ C + CTS+IL AI
Sbjct: 72 NYLI-GSLAVTDLMVSVLVLPMAALYQVLNKWTLGQVTCDLFIALDVLCCTSSILHLCAI 130
Query: 143 VLHTYLAVIHPLRYLSFMSHGAAWKAVALIWLVA--CCFPTFLIW 185
L Y A+ P+ Y++ + A ++L WL+ P L W
Sbjct: 131 ALDRYWAITDPIDYVNKRTPRRAAALISLTWLIGFLISIPPMLGW 175
>gi|4557865 somatostatin receptor 5 [Homo sapiens]
Length = 364
Score = 52.8 bits (125), Expect = 5e-07
Identities = 60/264 (22%), Positives = 113/264 (42%), Gaps = 20/264 (7%)
Query: 23 SKTPCMPQAASNTSLGLGDLRV-----PSSMLYWLFLPSS--LLAAATLAVSPLLLVTIL 75
+ TP ++ + G GD R PS+ + +P L+ AA L + L++ +L
Sbjct: 7 ASTPSWNASSPGAASGGGDNRTLVGPAPSAGARAVLVPVLYLLVCAAGLGGNTLVIYVVL 66
Query: 76 RNQRLRQEPH-YLLPANILLSDLAYIL-LHMLISSSSLGGWELGRMACGILTDAVFAACT 133
R +++ + Y+L N+ ++D+ Y+L L L + ++ W G + C ++
Sbjct: 67 RFAKMKTVTNIYIL--NLAVADVLYMLGLPFLATQNAASFWPFGPVLCRLVMTLDGVNQF 124
Query: 134 STILSFTAIVLHTYLAVIHPLRYLSFMSHGAAWKAVALIWLVACCFPTFLIWLSKWQDAQ 193
+++ T + + YLAV+HPL + A A A W+++ C L+ A
Sbjct: 125 TSVFCLTVMSVDRYLAVVHPLSSARWRRPRVAKLASAAAWVLSLCMSLPLLVF-----AD 179
Query: 194 LEEQGASYILPPSMGTQPGCGLLVIVTYTSILCVLFLCTALIANCFWRIYAEAKTSGIWG 253
++E G P G V + YT++L F +I C+ I + + +G+
Sbjct: 180 VQEGGTCNASWPE---PVGLWGAVFIIYTAVL-GFFAPLLVICLCYLLIVVKVRAAGVRV 235
Query: 254 QGYSRARGTLLIHSVLITLYVSTG 277
R + VL+ + V G
Sbjct: 236 GCVRRRSERKVTRMVLVVVLVFAG 259
>gi|4557265 beta-1-adrenergic receptor [Homo sapiens]
Length = 477
Score = 52.8 bits (125), Expect = 5e-07
Identities = 46/195 (23%), Positives = 86/195 (44%), Gaps = 12/195 (6%)
Query: 57 SLLAAATLAVSPLLLVTILRNQRLRQEPHYLLPANILLSDLAYILLHMLISSSSL--GGW 114
+L+ +A + L++V I + RL+ + + ++ +DL LL + ++ + G W
Sbjct: 66 ALIVLLIVAGNVLVIVAIAKTPRLQTLTNLFI-MSLASADLVMGLLVVPFGATIVVWGRW 124
Query: 115 ELGRMACGILTDAVFAACTSTILSFTAIVLHTYLAVIHPLRYLSFMSHGAAWKAVALIWL 174
E G C + T T++I + I L YLA+ P RY S ++ A V +W
Sbjct: 125 EYGSFFCELWTSVDVLCVTASIETLCVIALDRYLAITSPFRYQSLLTRARARGLVCTVWA 184
Query: 175 VACCFPTFLIWLSKWQDAQLEEQGASYILPPSMGTQPGCGLLVIVTY--TSILCVLFLCT 232
++ +FL L W A+ +E Y P C + Y S + ++
Sbjct: 185 IS-ALVSFLPILMHWWRAESDEARRCYNDPKC------CDFVTNRAYAIASSVVSFYVPL 237
Query: 233 ALIANCFWRIYAEAK 247
++A + R++ EA+
Sbjct: 238 CIMAFVYLRVFREAQ 252
>gi|111118990 alpha-1A-adrenergic receptor isoform 4 [Homo sapiens]
Length = 455
Score = 52.4 bits (124), Expect = 6e-07
Identities = 46/184 (25%), Positives = 79/184 (42%), Gaps = 22/184 (11%)
Query: 69 LLLVTILRNQRLRQEPHYLLPANILLSDLAYILLHMLISS--SSLGGWELGRMACGILTD 126
L+++++ ++ L HY + N+ ++DL + S+ LG W GR+ C I
Sbjct: 46 LVILSVACHRHLHSVTHYYI-VNLAVADLLLTSTVLPFSAIFEVLGYWAFGRVFCNIWAA 104
Query: 127 AVFAACTSTILSFTAIVLHTYLAVIHPLRYLSFMSHGAAWKAVALIW---LVACCFPTFL 183
CT++I+ I + Y+ V +PLRY + ++ A+ +W LV P F
Sbjct: 105 VDVLCCTASIMGLCIISIDRYIGVSYPLRYPTIVTQRRGLMALLCVWALSLVISIGPLF- 163
Query: 184 IWLSKWQDAQLEEQGASYILPPSMGTQPGCGLLVIVTYTSILCVLFLCTALIANCFWRIY 243
W+ E++ I +PG L S L +L A+I + R+Y
Sbjct: 164 ----GWRQPAPEDETICQI-----NEEPGYVLF------SALGSFYLPLAIILVMYCRVY 208
Query: 244 AEAK 247
AK
Sbjct: 209 VVAK 212
>gi|111118992 alpha-1A-adrenergic receptor isoform 1 [Homo sapiens]
Length = 466
Score = 52.4 bits (124), Expect = 6e-07
Identities = 46/184 (25%), Positives = 79/184 (42%), Gaps = 22/184 (11%)
Query: 69 LLLVTILRNQRLRQEPHYLLPANILLSDLAYILLHMLISS--SSLGGWELGRMACGILTD 126
L+++++ ++ L HY + N+ ++DL + S+ LG W GR+ C I
Sbjct: 46 LVILSVACHRHLHSVTHYYI-VNLAVADLLLTSTVLPFSAIFEVLGYWAFGRVFCNIWAA 104
Query: 127 AVFAACTSTILSFTAIVLHTYLAVIHPLRYLSFMSHGAAWKAVALIW---LVACCFPTFL 183
CT++I+ I + Y+ V +PLRY + ++ A+ +W LV P F
Sbjct: 105 VDVLCCTASIMGLCIISIDRYIGVSYPLRYPTIVTQRRGLMALLCVWALSLVISIGPLF- 163
Query: 184 IWLSKWQDAQLEEQGASYILPPSMGTQPGCGLLVIVTYTSILCVLFLCTALIANCFWRIY 243
W+ E++ I +PG L S L +L A+I + R+Y
Sbjct: 164 ----GWRQPAPEDETICQI-----NEEPGYVLF------SALGSFYLPLAIILVMYCRVY 208
Query: 244 AEAK 247
AK
Sbjct: 209 VVAK 212
>gi|111118986 alpha-1A-adrenergic receptor isoform 2 [Homo sapiens]
Length = 475
Score = 52.4 bits (124), Expect = 6e-07
Identities = 46/184 (25%), Positives = 79/184 (42%), Gaps = 22/184 (11%)
Query: 69 LLLVTILRNQRLRQEPHYLLPANILLSDLAYILLHMLISS--SSLGGWELGRMACGILTD 126
L+++++ ++ L HY + N+ ++DL + S+ LG W GR+ C I
Sbjct: 46 LVILSVACHRHLHSVTHYYI-VNLAVADLLLTSTVLPFSAIFEVLGYWAFGRVFCNIWAA 104
Query: 127 AVFAACTSTILSFTAIVLHTYLAVIHPLRYLSFMSHGAAWKAVALIW---LVACCFPTFL 183
CT++I+ I + Y+ V +PLRY + ++ A+ +W LV P F
Sbjct: 105 VDVLCCTASIMGLCIISIDRYIGVSYPLRYPTIVTQRRGLMALLCVWALSLVISIGPLF- 163
Query: 184 IWLSKWQDAQLEEQGASYILPPSMGTQPGCGLLVIVTYTSILCVLFLCTALIANCFWRIY 243
W+ E++ I +PG L S L +L A+I + R+Y
Sbjct: 164 ----GWRQPAPEDETICQI-----NEEPGYVLF------SALGSFYLPLAIILVMYCRVY 208
Query: 244 AEAK 247
AK
Sbjct: 209 VVAK 212
>gi|111118988 alpha-1A-adrenergic receptor isoform 3 [Homo sapiens]
Length = 429
Score = 52.4 bits (124), Expect = 6e-07
Identities = 46/184 (25%), Positives = 79/184 (42%), Gaps = 22/184 (11%)
Query: 69 LLLVTILRNQRLRQEPHYLLPANILLSDLAYILLHMLISS--SSLGGWELGRMACGILTD 126
L+++++ ++ L HY + N+ ++DL + S+ LG W GR+ C I
Sbjct: 46 LVILSVACHRHLHSVTHYYI-VNLAVADLLLTSTVLPFSAIFEVLGYWAFGRVFCNIWAA 104
Query: 127 AVFAACTSTILSFTAIVLHTYLAVIHPLRYLSFMSHGAAWKAVALIW---LVACCFPTFL 183
CT++I+ I + Y+ V +PLRY + ++ A+ +W LV P F
Sbjct: 105 VDVLCCTASIMGLCIISIDRYIGVSYPLRYPTIVTQRRGLMALLCVWALSLVISIGPLF- 163
Query: 184 IWLSKWQDAQLEEQGASYILPPSMGTQPGCGLLVIVTYTSILCVLFLCTALIANCFWRIY 243
W+ E++ I +PG L S L +L A+I + R+Y
Sbjct: 164 ----GWRQPAPEDETICQI-----NEEPGYVLF------SALGSFYLPLAIILVMYCRVY 208
Query: 244 AEAK 247
AK
Sbjct: 209 VVAK 212
>gi|10835197 5-hydroxytryptamine (serotonin) receptor 1F [Homo
sapiens]
Length = 366
Score = 52.4 bits (124), Expect = 6e-07
Identities = 49/211 (23%), Positives = 88/211 (41%), Gaps = 24/211 (11%)
Query: 43 RVPSSMLYWLFLPSSLLAAATLAVSPLLLVTILRNQRLRQEPHYLLPANILLSDLAYILL 102
R+PS +L L L S LA T ++ L++ I+ ++L +YL+ ++ ++D +L
Sbjct: 19 RMPSKILVSLTL--SGLALMTTTINSLVIAAIIVTRKLHHPANYLI-CSLAVTDFLVAVL 75
Query: 103 HMLISSSSL--GGWELGRMACGILTDAVFAACTSTILSFTAIVLHTYLAVIHPLRYLSFM 160
M S + W +G++ C I CT +IL +AI L Y A+ + Y
Sbjct: 76 VMPFSIVYIVRESWIMGQVVCDIWLSVDITCCTCSILHLSAIALDRYRAITDAVEYARKR 135
Query: 161 SHGAAWKAVALIWLVACCF---PTFLIWLSKWQDAQLEEQGASYILPPSMGTQPGCGLLV 217
+ A + ++W+++ P F W+ I +
Sbjct: 136 TPKHAGIMITIVWIISVFISMPPLF------WRHQGTSRDDECIIKHDH----------I 179
Query: 218 IVTYTSILCVLFLCTALIANCFWRIYAEAKT 248
+ T S ++ ALI +++IY AKT
Sbjct: 180 VSTIYSTFGAFYIPLALILILYYKIYRAAKT 210
>gi|4505445 neuropeptide Y receptor Y1 [Homo sapiens]
Length = 384
Score = 52.4 bits (124), Expect = 6e-07
Identities = 60/286 (20%), Positives = 120/286 (41%), Gaps = 28/286 (9%)
Query: 41 DLRVPSSMLYWLFLPSSLLAAATLAVSPLLLVTILRNQRLRQEPHYLLPANILLSDL--A 98
D +P +M++ L L + ++ + L++ IL+ + +R + L+ N+ SDL A
Sbjct: 32 DCHLPLAMIFTLALAYGAVIILGVSGNLALIIIILKQKEMRNVTNILI-VNLSFSDLLVA 90
Query: 99 YILLHMLISSSSLGGWELGRMACGILTDAVFAACTSTILSFTAIVLHTYLAVIHPLRYLS 158
+ L + + W G C + + T +I S I + + +I+P +
Sbjct: 91 IMCLPFTFVYTLMDHWVFGEAMCKLNPFVQCVSITVSIFSLVLIAVERHQLIINPRGWRP 150
Query: 159 FMSHGAAWKAVALIWLVACCFPT-FLIWL----SKWQDAQLEEQGASYI----LPPSMGT 209
H A+ +A+IW++A FLI+ +Q+ L+ Y+ P
Sbjct: 151 NNRH--AYVGIAVIWVLAVASSLPFLIYQVMTDEPFQNVTLDAYKDKYVCFDQFPSDSHR 208
Query: 210 QPGCGLLVIVTYTSILCVLFLCTALIANCFWRIYAEAKTSG----IWGQGYSRARGTLLI 265
LL+++ Y LC +F+ C+++IY K R+ T I
Sbjct: 209 LSYTTLLLVLQYFGPLCFIFI-------CYFKIYIRLKRRNNMMDKMRDNKYRSSETKRI 261
Query: 266 HSVLITLYVSTGVVFSLDMVLTRYHHIDSGTHTWLLAANSEVLMML 311
+ +L+++ V+ V + + LT ++ + H + N +L +L
Sbjct: 262 NIMLLSIVVAFAVCW---LPLTIFNTVFDWNHQIIATCNHNLLFLL 304
>gi|16876435 G protein-coupled receptor 101 [Homo sapiens]
Length = 508
Score = 52.4 bits (124), Expect = 6e-07
Identities = 54/216 (25%), Positives = 96/216 (44%), Gaps = 17/216 (7%)
Query: 23 SKTPCMPQAASNTSLGLGDLRVPSSMLYWLFLPSSLLAAATLAVSPLLLVTILRNQRLRQ 82
S CMP + SL G +R S + +FL +S + LA LV + Q L+
Sbjct: 14 SSHTCMPLSKMPISLAHGIIR---STVLVIFLAASFVGNIVLA-----LVLQRKPQLLQV 65
Query: 83 EPHYLLPANILLSDLAYILL--HMLISSSSLGGWELGRMACGILTDAVFAACTSTILSFT 140
++ N+L++DL I L ++++S W L C L +++ +
Sbjct: 66 TNRFIF--NLLVTDLLQISLVAPWVVATSVPLFWPLNSHFCTALVSLTHLFAFASVNTIV 123
Query: 141 AIVLHTYLAVIHPLRYLSFMSHGAAWKAVALIWLVACCFPTFLIWLSKWQDAQLEEQGAS 200
+ + YL++IHPL Y S M+ + + W+VA T ++ W A +E+ A
Sbjct: 124 VVSVDRYLSIIHPLSYPSKMTQRRGYLLLYGTWIVAILQSTPPLY--GWGQAAFDERNA- 180
Query: 201 YILPPSMGTQPGCGLLVIVTYTSI-LCVLFLCTALI 235
+ G P +L +V++ I L V+ C +++
Sbjct: 181 -LCSMIWGASPSYTILSVVSFIVIPLIVMIACYSVV 215
>gi|4502819 cholinergic receptor, muscarinic 3 [Homo sapiens]
Length = 590
Score = 52.0 bits (123), Expect = 8e-07
Identities = 39/196 (19%), Positives = 87/196 (44%), Gaps = 15/196 (7%)
Query: 56 SSLLAAATLAVSPLLLVTILRNQRLRQEPHYLLPANILLSDL--AYILLHMLISSSSLGG 113
+ +LA T+ + L++V+ N++L+ +Y L ++ +DL I +++ + +
Sbjct: 75 TGILALVTIIGNILVIVSFKVNKQLKTVNNYFL-LSLACADLIIGVISMNLFTTYIIMNR 133
Query: 114 WELGRMACGILTDAVFAACTSTILSFTAIVLHTYLAVIHPLRYLSFMSHGAAWKAVALIW 173
W LG +AC + + A +++++ I Y ++ PL Y + + A + L W
Sbjct: 134 WALGNLACDLWLAIDYVASNASVMNLLVISFDRYFSITRPLTYRAKRTTKRAGVMIGLAW 193
Query: 174 LVACCF--PTFLIWLSKWQDAQLEEQGASYILPPSMGTQPGCGLLVIVTYTSILCVLFLC 231
+++ P L W + + G +I S T +T+ + + ++
Sbjct: 194 VISFVLWAPAILFW-QYFVGKRTVPPGECFIQFLSEPT---------ITFGTAIAAFYMP 243
Query: 232 TALIANCFWRIYAEAK 247
++ +WRIY E +
Sbjct: 244 VTIMTILYWRIYKETE 259
>gi|10880131 5-hydroxytryptamine receptor 7 isoform b [Homo sapiens]
Length = 432
Score = 50.8 bits (120), Expect = 2e-06
Identities = 34/140 (24%), Positives = 66/140 (47%), Gaps = 6/140 (4%)
Query: 57 SLLAAATLAVSPLLLVTILRNQRLRQEPHYLLPANILLSDLAYILLHM-LISSSSL--GG 113
+L+ T+A + L+++++ ++LRQ +YL+ ++ L+DL+ + M +S + L G
Sbjct: 89 TLITLLTIAGNCLVVISVCFVKKLRQPSNYLI-VSLALADLSVAVAVMPFVSVTDLIGGK 147
Query: 114 WELGRMACGILTDAVFAACTSTILSFTAIVLHTYLAVIHPLRYLSFMSHGAAWKAVALIW 173
W G C + CT++I++ I + YL + PL Y + K + +W
Sbjct: 148 WIFGHFFCNVFIAMDVMCCTASIMTLCVISIDRYLGITRPLTYPVRQNGKCMAKMILSVW 207
Query: 174 LVAC--CFPTFLIWLSKWQD 191
L++ P W D
Sbjct: 208 LLSASITLPPLFGWAQNVND 227
>gi|10880129 5-hydroxytryptamine receptor 7 isoform d [Homo sapiens]
Length = 479
Score = 50.8 bits (120), Expect = 2e-06
Identities = 34/140 (24%), Positives = 66/140 (47%), Gaps = 6/140 (4%)
Query: 57 SLLAAATLAVSPLLLVTILRNQRLRQEPHYLLPANILLSDLAYILLHM-LISSSSL--GG 113
+L+ T+A + L+++++ ++LRQ +YL+ ++ L+DL+ + M +S + L G
Sbjct: 89 TLITLLTIAGNCLVVISVCFVKKLRQPSNYLI-VSLALADLSVAVAVMPFVSVTDLIGGK 147
Query: 114 WELGRMACGILTDAVFAACTSTILSFTAIVLHTYLAVIHPLRYLSFMSHGAAWKAVALIW 173
W G C + CT++I++ I + YL + PL Y + K + +W
Sbjct: 148 WIFGHFFCNVFIAMDVMCCTASIMTLCVISIDRYLGITRPLTYPVRQNGKCMAKMILSVW 207
Query: 174 LVAC--CFPTFLIWLSKWQD 191
L++ P W D
Sbjct: 208 LLSASITLPPLFGWAQNVND 227
>gi|4504547 5-hydroxytryptamine receptor 7 isoform a [Homo sapiens]
Length = 445
Score = 50.8 bits (120), Expect = 2e-06
Identities = 34/140 (24%), Positives = 66/140 (47%), Gaps = 6/140 (4%)
Query: 57 SLLAAATLAVSPLLLVTILRNQRLRQEPHYLLPANILLSDLAYILLHM-LISSSSL--GG 113
+L+ T+A + L+++++ ++LRQ +YL+ ++ L+DL+ + M +S + L G
Sbjct: 89 TLITLLTIAGNCLVVISVCFVKKLRQPSNYLI-VSLALADLSVAVAVMPFVSVTDLIGGK 147
Query: 114 WELGRMACGILTDAVFAACTSTILSFTAIVLHTYLAVIHPLRYLSFMSHGAAWKAVALIW 173
W G C + CT++I++ I + YL + PL Y + K + +W
Sbjct: 148 WIFGHFFCNVFIAMDVMCCTASIMTLCVISIDRYLGITRPLTYPVRQNGKCMAKMILSVW 207
Query: 174 LVAC--CFPTFLIWLSKWQD 191
L++ P W D
Sbjct: 208 LLSASITLPPLFGWAQNVND 227
>gi|4504541 5-hydroxytryptamine (serotonin) receptor 2C [Homo
sapiens]
Length = 458
Score = 50.4 bits (119), Expect = 2e-06
Identities = 39/170 (22%), Positives = 77/170 (45%), Gaps = 6/170 (3%)
Query: 10 VGTTAWPALIQLISKTPCMPQAASNTSLGLGDLRVPSSMLYWLFLPSSLLAAATLAVSPL 69
+G W I +S + NTS G G + P + W L ++ T+ + L
Sbjct: 16 IGLLVWQCDIS-VSPVAAIVTDIFNTSDG-GRFKFPDGVQNWPALSIVIIIIMTIGGNIL 73
Query: 70 LLVTILRNQRLRQEPHYLLPANILLSDLAYILLHMLISSSSL---GGWELGRMACGILTD 126
+++ + ++L +Y L ++ ++D+ LL M +S ++ W L R C +
Sbjct: 74 VIMAVSMEKKLHNATNYFL-MSLAIADMLVGLLVMPLSLLAILYDYVWPLPRYLCPVWIS 132
Query: 127 AVFAACTSTILSFTAIVLHTYLAVIHPLRYLSFMSHGAAWKAVALIWLVA 176
T++I+ AI L Y+A+ +P+ + F S A +A++W ++
Sbjct: 133 LDVLFSTASIMHLCAISLDRYVAIRNPIEHSRFNSRTKAIMKIAIVWAIS 182
>gi|57165371 G protein-coupled receptor 61 [Homo sapiens]
Length = 451
Score = 49.3 bits (116), Expect = 5e-06
Identities = 59/231 (25%), Positives = 98/231 (42%), Gaps = 34/231 (14%)
Query: 22 ISKTPCMPQAASNTSLGLGDLRVPSSMLYWLFLPSSLLAAATLAVSPLLLVTILRNQRLR 81
+ +TP A+ +GL D+ S L+++ L A AV + I + LR
Sbjct: 19 VPQTPGPSTASGVPEVGLRDVASESVALFFMLLLDLTAVAGNAAV----MAVIAKTPALR 74
Query: 82 QEPHYLLPANILLSDLAYILLHM---LISSSSLGGWEL-GRMACGILTDAVFAACTSTIL 137
+ ++ ++ L DL L M ++SSS+L L G +AC + + IL
Sbjct: 75 K---FVFVFHLCLVDLLAALTLMPLAMLSSSALFDHALFGEVACRLYLFLSVCFVSLAIL 131
Query: 138 SFTAIVLHTYLAVIHPLRYLSFMSHGAAWKAVALIWLVACCFPTF-LIWLSKWQDAQLEE 196
S +AI + Y V+HP+RY M+ G + +W+ A + ++ W E
Sbjct: 132 SVSAINVERYYYVVHPMRYEVRMTLGLVASVLVGVWVKALAMASVPVLGRVSW------E 185
Query: 197 QGASYILPPSMGTQPGCGL---------LVIVTYTSILCVLFLCTALIANC 238
+GA PS+ PGC L L +V + + +L L L+ C
Sbjct: 186 EGA-----PSV--PPGCSLQWSHSAYCQLFVVVFAVLYFLLPLLLILVVYC 229
>gi|29029612 pyrimidinergic receptor P2Y6 [Homo sapiens]
Length = 328
Score = 48.9 bits (115), Expect = 7e-06
Identities = 55/196 (28%), Positives = 84/196 (42%), Gaps = 17/196 (8%)
Query: 52 LFLPS--SLLAAATLAVSPLLLVTILRNQR-LRQEPHYLLPANILLSDLAYIL-LHMLIS 107
L LP S + AA L ++ ++ I ++R L + Y L N+ L+DL Y L +LI
Sbjct: 27 LLLPPVYSAVLAAGLPLNICVITQICTSRRALTRTAVYTL--NLALADLLYACSLPLLIY 84
Query: 108 SSSLGG-WELGRMACGILTDAVFAACTSTILSFTAIVLHTYLAVIHPLR-YLSFMSHGAA 165
+ + G W G AC ++ +A +IL T I YL + HPL + AA
Sbjct: 85 NYAQGDHWPFGDFACRLVRFLFYANLHGSILFLTCISFQRYLGICHPLAPWHKRGGRRAA 144
Query: 166 WKAVALIWLVAC--CFPTFLIWLSKWQDAQLEEQGASYIL-PPSMGT--QPGCGLLVIVT 220
W +WL C PT + + Q + Y L PP++ T P L ++
Sbjct: 145 WLVCVAVWLAVTTQCLPTAIFAATGIQ----RNRTVCYDLSPPALATHYMPYGMALTVIG 200
Query: 221 YTSILCVLFLCTALIA 236
+ L C L+A
Sbjct: 201 FLLPFAALLACYCLLA 216
>gi|29029610 pyrimidinergic receptor P2Y6 [Homo sapiens]
Length = 328
Score = 48.9 bits (115), Expect = 7e-06
Identities = 55/196 (28%), Positives = 84/196 (42%), Gaps = 17/196 (8%)
Query: 52 LFLPS--SLLAAATLAVSPLLLVTILRNQR-LRQEPHYLLPANILLSDLAYIL-LHMLIS 107
L LP S + AA L ++ ++ I ++R L + Y L N+ L+DL Y L +LI
Sbjct: 27 LLLPPVYSAVLAAGLPLNICVITQICTSRRALTRTAVYTL--NLALADLLYACSLPLLIY 84
Query: 108 SSSLGG-WELGRMACGILTDAVFAACTSTILSFTAIVLHTYLAVIHPLR-YLSFMSHGAA 165
+ + G W G AC ++ +A +IL T I YL + HPL + AA
Sbjct: 85 NYAQGDHWPFGDFACRLVRFLFYANLHGSILFLTCISFQRYLGICHPLAPWHKRGGRRAA 144
Query: 166 WKAVALIWLVAC--CFPTFLIWLSKWQDAQLEEQGASYIL-PPSMGT--QPGCGLLVIVT 220
W +WL C PT + + Q + Y L PP++ T P L ++
Sbjct: 145 WLVCVAVWLAVTTQCLPTAIFAATGIQ----RNRTVCYDLSPPALATHYMPYGMALTVIG 200
Query: 221 YTSILCVLFLCTALIA 236
+ L C L+A
Sbjct: 201 FLLPFAALLACYCLLA 216
>gi|29029608 pyrimidinergic receptor P2Y6 [Homo sapiens]
Length = 328
Score = 48.9 bits (115), Expect = 7e-06
Identities = 55/196 (28%), Positives = 84/196 (42%), Gaps = 17/196 (8%)
Query: 52 LFLPS--SLLAAATLAVSPLLLVTILRNQR-LRQEPHYLLPANILLSDLAYIL-LHMLIS 107
L LP S + AA L ++ ++ I ++R L + Y L N+ L+DL Y L +LI
Sbjct: 27 LLLPPVYSAVLAAGLPLNICVITQICTSRRALTRTAVYTL--NLALADLLYACSLPLLIY 84
Query: 108 SSSLGG-WELGRMACGILTDAVFAACTSTILSFTAIVLHTYLAVIHPLR-YLSFMSHGAA 165
+ + G W G AC ++ +A +IL T I YL + HPL + AA
Sbjct: 85 NYAQGDHWPFGDFACRLVRFLFYANLHGSILFLTCISFQRYLGICHPLAPWHKRGGRRAA 144
Query: 166 WKAVALIWLVAC--CFPTFLIWLSKWQDAQLEEQGASYIL-PPSMGT--QPGCGLLVIVT 220
W +WL C PT + + Q + Y L PP++ T P L ++
Sbjct: 145 WLVCVAVWLAVTTQCLPTAIFAATGIQ----RNRTVCYDLSPPALATHYMPYGMALTVIG 200
Query: 221 YTSILCVLFLCTALIA 236
+ L C L+A
Sbjct: 201 FLLPFAALLACYCLLA 216
>gi|4758864 pyrimidinergic receptor P2Y6 [Homo sapiens]
Length = 328
Score = 48.9 bits (115), Expect = 7e-06
Identities = 55/196 (28%), Positives = 84/196 (42%), Gaps = 17/196 (8%)
Query: 52 LFLPS--SLLAAATLAVSPLLLVTILRNQR-LRQEPHYLLPANILLSDLAYIL-LHMLIS 107
L LP S + AA L ++ ++ I ++R L + Y L N+ L+DL Y L +LI
Sbjct: 27 LLLPPVYSAVLAAGLPLNICVITQICTSRRALTRTAVYTL--NLALADLLYACSLPLLIY 84
Query: 108 SSSLGG-WELGRMACGILTDAVFAACTSTILSFTAIVLHTYLAVIHPLR-YLSFMSHGAA 165
+ + G W G AC ++ +A +IL T I YL + HPL + AA
Sbjct: 85 NYAQGDHWPFGDFACRLVRFLFYANLHGSILFLTCISFQRYLGICHPLAPWHKRGGRRAA 144
Query: 166 WKAVALIWLVAC--CFPTFLIWLSKWQDAQLEEQGASYIL-PPSMGT--QPGCGLLVIVT 220
W +WL C PT + + Q + Y L PP++ T P L ++
Sbjct: 145 WLVCVAVWLAVTTQCLPTAIFAATGIQ----RNRTVCYDLSPPALATHYMPYGMALTVIG 200
Query: 221 YTSILCVLFLCTALIA 236
+ L C L+A
Sbjct: 201 FLLPFAALLACYCLLA 216
>gi|15150803 opsin 4 isoform 1 [Homo sapiens]
Length = 478
Score = 48.5 bits (114), Expect = 9e-06
Identities = 58/251 (23%), Positives = 98/251 (39%), Gaps = 17/251 (6%)
Query: 17 ALIQLISKTPCMPQAASNTSLGLGDLRVPSSMLYWLFLPSSLLAAATLAVSPLLLVTILR 76
+L +L S +P P + + L + VP Y L L+ + + ++ T R
Sbjct: 38 SLGRLPSISPTAPGTWAAAWVPLPTVDVPDHAHYTLGTVILLVGLTGMLGNLTVIYTFCR 97
Query: 77 NQRLRQEPHYLLPANILLSD--LAYILLHMLISSSSLGGWELGRMACGILTDAVFAACTS 134
++ LR P + N+ +SD +++ + +SS W G C S
Sbjct: 98 SRSLRT-PANMFIINLAVSDFLMSFTQAPVFFTSSLYKQWLFGETGCEFYAFCGALFGIS 156
Query: 135 TILSFTAIVLHTYLAVIHPLRYLSFMSHGAAWKAVALIWLVACCF--PTFLIWLSKWQDA 192
++++ TAI L YL + PL S A + +WL A + P F W + +
Sbjct: 157 SMITLTAIALDRYLVITRPLATFGVASKRRAAFVLLGVWLYALAWSLPPFFGWSAYVPEG 216
Query: 193 QLEEQGASYILPPSMGTQPGCGLLVIVTYTSILC--VLFLCTALIANCFWRIYAEAKTSG 250
L Y M P + YT +LC V FL +I C+ I+ + +G
Sbjct: 217 LLTSCSWDY-----MSFTP-----AVRAYTMLLCCFVFFLPLLIIIYCYIFIFRAIRETG 266
Query: 251 IWGQGYSRARG 261
Q + +G
Sbjct: 267 RALQTFGACKG 277
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.328 0.138 0.444
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,804,346
Number of Sequences: 37866
Number of extensions: 525382
Number of successful extensions: 2223
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 188
Number of HSP's successfully gapped in prelim test: 266
Number of HSP's that attempted gapping in prelim test: 1920
Number of HSP's gapped (non-prelim): 488
length of query: 347
length of database: 18,247,518
effective HSP length: 103
effective length of query: 244
effective length of database: 14,347,320
effective search space: 3500746080
effective search space used: 3500746080
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.