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Search of human proteins with 46309849
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|46309849 hypothetical protein LOC57035 [Homo sapiens]
(290 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|46309849 hypothetical protein LOC57035 [Homo sapiens] 572 e-163
gi|21040326 SON DNA-binding protein isoform F [Homo sapiens] 101 7e-22
gi|21040314 SON DNA-binding protein isoform B [Homo sapiens] 101 7e-22
gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens] 94 2e-19
gi|133922600 splicing factor, arginine/serine-rich 16 [Homo sapi... 92 4e-19
gi|20127499 arginine/serine-rich splicing factor 6 [Homo sapiens] 82 7e-16
gi|154146223 splicing factor, arginine/serine-rich 130 [Homo sap... 81 9e-16
gi|154146193 splicing factor, arginine/serine-rich 130 [Homo sap... 81 9e-16
gi|38146107 arginine/serine-rich coiled-coil 2 isoform a [Homo s... 81 1e-15
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 80 3e-15
gi|224548936 hypothetical protein LOC100170229 [Homo sapiens] 77 1e-14
gi|6631100 natural killer-tumor recognition sequence [Homo sapiens] 77 2e-14
gi|38146113 arginine/serine-rich coiled-coil 2 isoform b [Homo s... 77 2e-14
gi|116089325 splicing factor, arginine/serine-rich 12 isoform a ... 75 5e-14
gi|21040255 splicing factor, arginine/serine-rich 12 isoform b [... 75 5e-14
gi|42560244 peptidylprolyl isomerase G [Homo sapiens] 73 3e-13
gi|4759100 splicing factor, arginine/serine-rich 11 [Homo sapiens] 69 5e-12
gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens] 69 6e-12
gi|119226260 calcium homeostasis endoplasmic reticulum protein [... 69 6e-12
gi|47271443 splicing factor, arginine/serine-rich 2 [Homo sapiens] 68 1e-11
gi|117938254 BCL2-associated transcription factor 1 isoform 3 [H... 68 1e-11
gi|7661958 BCL2-associated transcription factor 1 isoform 1 [Hom... 68 1e-11
gi|9558733 transformer-2 alpha [Homo sapiens] 67 1e-11
gi|41327773 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo sapi... 67 1e-11
gi|239756568 PREDICTED: similar to BCL2-associated transcription... 66 3e-11
gi|169218320 PREDICTED: similar to BCL2-associated transcription... 66 3e-11
gi|117938251 BCL2-associated transcription factor 1 isoform 2 [H... 66 4e-11
gi|50083281 KIAA1853 protein [Homo sapiens] 66 4e-11
gi|72534660 splicing factor, arginine/serine-rich 7 [Homo sapiens] 65 5e-11
gi|88758580 cyclin L2 isoform A [Homo sapiens] 65 7e-11
>gi|46309849 hypothetical protein LOC57035 [Homo sapiens]
Length = 290
Score = 572 bits (1475), Expect = e-163
Identities = 290/290 (100%), Positives = 290/290 (100%)
Query: 1 MSNYVNDMWPGSPQEKDSPSTSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRS 60
MSNYVNDMWPGSPQEKDSPSTSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRS
Sbjct: 1 MSNYVNDMWPGSPQEKDSPSTSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRS 60
Query: 61 KSRSRSRRRHQRKYRRYSRSYSRSRSRSRSRRYRERRYGFTRRYYRSPSRYRSRSRSRSR 120
KSRSRSRRRHQRKYRRYSRSYSRSRSRSRSRRYRERRYGFTRRYYRSPSRYRSRSRSRSR
Sbjct: 61 KSRSRSRRRHQRKYRRYSRSYSRSRSRSRSRRYRERRYGFTRRYYRSPSRYRSRSRSRSR 120
Query: 121 SRGRSYCGRAYAIARGQRYYGFGRTVYPEEHSRWRDRSRTRSRSRTPFRLSEKDRMELLE 180
SRGRSYCGRAYAIARGQRYYGFGRTVYPEEHSRWRDRSRTRSRSRTPFRLSEKDRMELLE
Sbjct: 121 SRGRSYCGRAYAIARGQRYYGFGRTVYPEEHSRWRDRSRTRSRSRTPFRLSEKDRMELLE 180
Query: 181 IAKTNAAKALGTTNIDLPASLRTVPSAKETSRGIGVSSNGAKPELSEKVTEDGTRNPNEK 240
IAKTNAAKALGTTNIDLPASLRTVPSAKETSRGIGVSSNGAKPELSEKVTEDGTRNPNEK
Sbjct: 181 IAKTNAAKALGTTNIDLPASLRTVPSAKETSRGIGVSSNGAKPELSEKVTEDGTRNPNEK 240
Query: 241 PTQQRSIAFSSNNSVAKPIQKSAKAATEEASSRSPKIDQKKSPYGLWIPI 290
PTQQRSIAFSSNNSVAKPIQKSAKAATEEASSRSPKIDQKKSPYGLWIPI
Sbjct: 241 PTQQRSIAFSSNNSVAKPIQKSAKAATEEASSRSPKIDQKKSPYGLWIPI 290
>gi|21040326 SON DNA-binding protein isoform F [Homo sapiens]
Length = 2426
Score = 101 bits (252), Expect = 7e-22
Identities = 107/331 (32%), Positives = 144/331 (43%), Gaps = 56/331 (16%)
Query: 14 QEKDSPSTSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRSR------ 67
+ + S S S+S G +S R RS S+S R R SSR R R+RSR
Sbjct: 1870 RRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRARSRTPSRRS 1929
Query: 68 RRHQRKYRRYSRSYSRSRS---------RSRSRRYR--ERRYGFTRRYYRSPSRYRSRSR 116
R H RR SRS R RS R+ SRR R RR R R+PSR RSR+
Sbjct: 1930 RSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSR-RSRTP 1988
Query: 117 SRSRSRGRSYCGRAYAIARGQRY------YGFGRTVYPEEHSRW---RDRSRTRSRSRTP 167
SR RSR S R+ ++ R + + RT SR R RSR+ R R+P
Sbjct: 1989 SR-RSRTPSRRRRSRSVVRRRSFSISPVRLRRSRTPLRRRFSRSPIRRKRSRSSERGRSP 2047
Query: 168 FRLSEKDRMELLEIAKTNAAKALGTTNIDLPASLRTVPSAKETSRGIGVSSNGAKPELSE 227
RL++ D+ +LLEIAK NAA + LP +L+ P + S EL+E
Sbjct: 2048 KRLTDLDKAQLLEIAKANAAAMCAKAGVPLPPNLKPAPPPTIEEKVAKKSGGATIEELTE 2107
Query: 228 K-------------------VTEDGTRNP-----NEKPTQQRSIAFSSNNSVAKPI-QKS 262
K V+++ P K ++ + I F+ N + AKP KS
Sbjct: 2108 KCKQIAQSKEDDDVIVNKPHVSDEEEEEPPFYHHPFKLSEPKPIFFNLNIAAAKPTPPKS 2167
Query: 263 AKAATEEASSRSPKIDQKK---SPYGLWIPI 290
T+E S +KK S YG W+P+
Sbjct: 2168 QVTLTKEFPVSSGSQHRKKEADSVYGEWVPV 2198
Score = 74.3 bits (181), Expect = 1e-13
Identities = 61/169 (36%), Positives = 77/169 (45%), Gaps = 14/169 (8%)
Query: 16 KDSPSTSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRSRRRHQRKYR 75
KD+ S+ + + + R S SRS SS SR R S+SRSR+R+R +
Sbjct: 1797 KDTHEKSKKNKNRDKGEKEKKRDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKS 1856
Query: 76 RYSRSYSRSRSRSRSRRYRERRYGFTRRYY------RSPSRYRSRSRSRSRSRGRSYCGR 129
S++ SRSRSR R R R R RR RSP ++RS+SR R R R S R
Sbjct: 1857 HRSQTRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKRSP-KHRSKSRERKRKRSSSRDNR 1915
Query: 130 AYAIARGQRYYGFGRTVYPEEHSRWRDRSRTRS-------RSRTPFRLS 171
AR + R+ P R R R RS RSRTP R S
Sbjct: 1916 KTVRARSRTPSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRS 1964
Score = 73.2 bits (178), Expect = 3e-13
Identities = 67/173 (38%), Positives = 87/173 (50%), Gaps = 23/173 (13%)
Query: 14 QEKDSPSTSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRSRRRHQRK 73
+EK S+ RS SS +SR + SRS +R S S+S RS++RSRSR R +R+
Sbjct: 1814 KEKKRDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRSS-KSKSHRSQTRSRSRSRRRRR 1872
Query: 74 YRRYSRSYSRSRSRSRSRRYRERRYGFTRRYYRSPSRYRSRSRS---------RSRSRGR 124
SRSRS+SR RR + +RS SR R R RS R+RSR
Sbjct: 1873 -------SSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRARSRTP 1925
Query: 125 SYCGRAYAIARGQRYYGFGR----TVYPEEHSRWRD-RSRTRS-RSRTPFRLS 171
S R++ +R +R GR ++ P SR RSRT S RSRTP R S
Sbjct: 1926 SRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSRRS 1978
Score = 39.3 bits (90), Expect = 0.004
Identities = 61/285 (21%), Positives = 109/285 (38%), Gaps = 23/285 (8%)
Query: 10 PGSPQEKDSPSTSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRSRRR 69
P P++ + ++ R+G L + R S +S V S R+ S S +
Sbjct: 1736 PLLPKDMERLTSLRAGIEGPLLASDVGRDRSAASP----VVSSMPERASESSSEEKDDYE 1791
Query: 70 HQRKYRRYSRSYSRSRSRSRSRRYRERRYGFTRRYYRSPS-RYRSRSR---SRSRSRGRS 125
K + ++++R + + ++R R RS S ++SR R SRSR+R RS
Sbjct: 1792 IFVKVKDTHEKSKKNKNRDKGEKEKKRDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRS 1851
Query: 126 YCGRAYAIARGQRYYGFGRTVYPEEHSRWRDRSRTR------SRSRTP-FRLSEKDRMEL 178
+++ R R+ SR R +SR R R R+P R ++R
Sbjct: 1852 SKSKSHRSQTRSR----SRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRK 1907
Query: 179 LEIAKTNAAKALGTTNIDLPASLRTVPSAKETSRGIG-VSSNGAKPELSEKVTEDGTRNP 237
++ N + S PS + SR +G S P + +R P
Sbjct: 1908 RSSSRDNRKTVRARSRTPSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTP 1967
Query: 238 NEKPTQQRSIAFSSNNSVAKPIQKSAKAATEEASSRSPKIDQKKS 282
+ + R+ + S + S ++ T RS + +++S
Sbjct: 1968 SRR---SRTPSRRSRTPSRRSRTPSRRSRTPSRRRRSRSVVRRRS 2009
>gi|21040314 SON DNA-binding protein isoform B [Homo sapiens]
Length = 2303
Score = 101 bits (252), Expect = 7e-22
Identities = 107/331 (32%), Positives = 144/331 (43%), Gaps = 56/331 (16%)
Query: 14 QEKDSPSTSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRSR------ 67
+ + S S S+S G +S R RS S+S R R SSR R R+RSR
Sbjct: 1870 RRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRARSRTPSRRS 1929
Query: 68 RRHQRKYRRYSRSYSRSRS---------RSRSRRYR--ERRYGFTRRYYRSPSRYRSRSR 116
R H RR SRS R RS R+ SRR R RR R R+PSR RSR+
Sbjct: 1930 RSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSR-RSRTP 1988
Query: 117 SRSRSRGRSYCGRAYAIARGQRY------YGFGRTVYPEEHSRW---RDRSRTRSRSRTP 167
SR RSR S R+ ++ R + + RT SR R RSR+ R R+P
Sbjct: 1989 SR-RSRTPSRRRRSRSVVRRRSFSISPVRLRRSRTPLRRRFSRSPIRRKRSRSSERGRSP 2047
Query: 168 FRLSEKDRMELLEIAKTNAAKALGTTNIDLPASLRTVPSAKETSRGIGVSSNGAKPELSE 227
RL++ D+ +LLEIAK NAA + LP +L+ P + S EL+E
Sbjct: 2048 KRLTDLDKAQLLEIAKANAAAMCAKAGVPLPPNLKPAPPPTIEEKVAKKSGGATIEELTE 2107
Query: 228 K-------------------VTEDGTRNP-----NEKPTQQRSIAFSSNNSVAKPI-QKS 262
K V+++ P K ++ + I F+ N + AKP KS
Sbjct: 2108 KCKQIAQSKEDDDVIVNKPHVSDEEEEEPPFYHHPFKLSEPKPIFFNLNIAAAKPTPPKS 2167
Query: 263 AKAATEEASSRSPKIDQKK---SPYGLWIPI 290
T+E S +KK S YG W+P+
Sbjct: 2168 QVTLTKEFPVSSGSQHRKKEADSVYGEWVPV 2198
Score = 74.3 bits (181), Expect = 1e-13
Identities = 61/169 (36%), Positives = 77/169 (45%), Gaps = 14/169 (8%)
Query: 16 KDSPSTSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRSRRRHQRKYR 75
KD+ S+ + + + R S SRS SS SR R S+SRSR+R+R +
Sbjct: 1797 KDTHEKSKKNKNRDKGEKEKKRDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKS 1856
Query: 76 RYSRSYSRSRSRSRSRRYRERRYGFTRRYY------RSPSRYRSRSRSRSRSRGRSYCGR 129
S++ SRSRSR R R R R RR RSP ++RS+SR R R R S R
Sbjct: 1857 HRSQTRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKRSP-KHRSKSRERKRKRSSSRDNR 1915
Query: 130 AYAIARGQRYYGFGRTVYPEEHSRWRDRSRTRS-------RSRTPFRLS 171
AR + R+ P R R R RS RSRTP R S
Sbjct: 1916 KTVRARSRTPSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRS 1964
Score = 73.2 bits (178), Expect = 3e-13
Identities = 67/173 (38%), Positives = 87/173 (50%), Gaps = 23/173 (13%)
Query: 14 QEKDSPSTSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRSRRRHQRK 73
+EK S+ RS SS +SR + SRS +R S S+S RS++RSRSR R +R+
Sbjct: 1814 KEKKRDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRSS-KSKSHRSQTRSRSRSRRRRR 1872
Query: 74 YRRYSRSYSRSRSRSRSRRYRERRYGFTRRYYRSPSRYRSRSRS---------RSRSRGR 124
SRSRS+SR RR + +RS SR R R RS R+RSR
Sbjct: 1873 -------SSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRARSRTP 1925
Query: 125 SYCGRAYAIARGQRYYGFGR----TVYPEEHSRWRD-RSRTRS-RSRTPFRLS 171
S R++ +R +R GR ++ P SR RSRT S RSRTP R S
Sbjct: 1926 SRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSRRS 1978
Score = 39.3 bits (90), Expect = 0.004
Identities = 61/285 (21%), Positives = 109/285 (38%), Gaps = 23/285 (8%)
Query: 10 PGSPQEKDSPSTSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRSRRR 69
P P++ + ++ R+G L + R S +S V S R+ S S +
Sbjct: 1736 PLLPKDMERLTSLRAGIEGPLLASDVGRDRSAASP----VVSSMPERASESSSEEKDDYE 1791
Query: 70 HQRKYRRYSRSYSRSRSRSRSRRYRERRYGFTRRYYRSPS-RYRSRSR---SRSRSRGRS 125
K + ++++R + + ++R R RS S ++SR R SRSR+R RS
Sbjct: 1792 IFVKVKDTHEKSKKNKNRDKGEKEKKRDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRS 1851
Query: 126 YCGRAYAIARGQRYYGFGRTVYPEEHSRWRDRSRTR------SRSRTP-FRLSEKDRMEL 178
+++ R R+ SR R +SR R R R+P R ++R
Sbjct: 1852 SKSKSHRSQTRSR----SRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRK 1907
Query: 179 LEIAKTNAAKALGTTNIDLPASLRTVPSAKETSRGIG-VSSNGAKPELSEKVTEDGTRNP 237
++ N + S PS + SR +G S P + +R P
Sbjct: 1908 RSSSRDNRKTVRARSRTPSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTP 1967
Query: 238 NEKPTQQRSIAFSSNNSVAKPIQKSAKAATEEASSRSPKIDQKKS 282
+ + R+ + S + S ++ T RS + +++S
Sbjct: 1968 SRR---SRTPSRRSRTPSRRSRTPSRRSRTPSRRRRSRSVVRRRS 2009
>gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens]
Length = 494
Score = 93.6 bits (231), Expect = 2e-19
Identities = 93/303 (30%), Positives = 146/303 (48%), Gaps = 33/303 (10%)
Query: 10 PGSPQEKD---SPSTSRSGGSSRLSSRSRSRS-FSRSSRSHSRVSSRFSSRSR-----RS 60
PGS + + S S SRS SR S +SRSRS S+SS S SR SR SRSR RS
Sbjct: 177 PGSRRRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKSRSRS 236
Query: 61 KSRSRSRRRHQR---KYRRYSRSYSRSRSRSRSRRYRERRY----GFTRRYYRSPSRYRS 113
+SRSRS++ R K + SRS+S +SRS+S+ E + + RSPSR++S
Sbjct: 237 QSRSRSKKEKSRSPSKEKSRSRSHSAGKSRSKSKDQAEEKIQNNDNVGKPKSRSPSRHKS 296
Query: 114 RSRSRSRSRGRSY-CGRAYAIARGQRYYGFGRTVYPEEHSRWRDRSRTRSRSRTP----- 167
+S+SRSRS+ R + +++RG+ R S+ RSR+RSRS++
Sbjct: 297 KSKSRSRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSRSKGGSRSRSRSRSKSKDKRKG 356
Query: 168 -FRLSEKDRMELLEIAKTNAAKALGTTNIDLPASLRTV-------PSAKETSRGIGVSSN 219
R E+ R +K+ ++ G+ S + ++ SR +
Sbjct: 357 RKRSREESRSRSRSRSKSERSRKRGSKRDSKAGSSKKKKKEDTDRSQSRSPSRSVSKERE 416
Query: 220 GAKPELSEKVTEDGTRNPNEKPTQQRSIAFSSNNSVAKPIQKSAKAATEEASSRSPKIDQ 279
AK E S++ +G T Q + + S +NS +KP S + +++S++ +
Sbjct: 417 HAKSESSQR---EGRGESENAGTNQETRSRSRSNSKSKPNLPSESRSRSKSASKTRSRSK 473
Query: 280 KKS 282
+S
Sbjct: 474 SRS 476
Score = 72.8 bits (177), Expect = 3e-13
Identities = 65/192 (33%), Positives = 87/192 (45%), Gaps = 30/192 (15%)
Query: 12 SPQEKDSPSTSRSGGSSRLSSRSRSRSFSRS-SRSHSRVSSRFSSRSR---RSKSRSRSR 67
SP S S SRS R + S SR S+ S SR SRS+ RS+SRSRS+
Sbjct: 290 SPSRHKSKSKSRSRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSRSKGGSRSRSRSRSK 349
Query: 68 RRHQRKYRRYSRSYSRSRSRSRSRRYRERRYGFTR-----------------RYYRSPSR 110
+ +RK R+ SR SRSRSRSRS+ R R+ G R RSPSR
Sbjct: 350 SKDKRKGRKRSREESRSRSRSRSKSERSRKRGSKRDSKAGSSKKKKKEDTDRSQSRSPSR 409
Query: 111 YRSRSRSRSRSRGRSYCGRAYAIARGQRYYGFGRT---------VYPEEHSRWRDRSRTR 161
S+ R ++S GR + G R+ + E SR + S+TR
Sbjct: 410 SVSKEREHAKSESSQREGRGESENAGTNQETRSRSRSNSKSKPNLPSESRSRSKSASKTR 469
Query: 162 SRSRTPFRLSEK 173
SRS++ R + +
Sbjct: 470 SRSKSRSRSASR 481
Score = 70.5 bits (171), Expect = 2e-12
Identities = 75/248 (30%), Positives = 115/248 (46%), Gaps = 34/248 (13%)
Query: 49 VSSRFSSRSRRS------KSRSRSRRRHQRKYR------------RYSRSYSRSRSRSRS 90
V + SR RRS SRSRSR RH RK R SRS S SRSRS+S
Sbjct: 173 VEDKPGSRRRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKS 232
Query: 91 RRYRERRYGFTRRYYRSPSRYRSRSRSRSRSRGRSYCGRAYAIARGQRYYGFGRTVYPEE 150
R + R + RSPS+ +SRSRS S + RS + A + Q G+ P+
Sbjct: 233 RSRSQSRSRSKKEKSRSPSKEKSRSRSHSAGKSRSK-SKDQAEEKIQNNDNVGK---PKS 288
Query: 151 HSRWRDRSRTRSRSRTPFRLSEKDRMELLEIAKTNAAKALGTTNIDLPASLRTVPSAKET 210
S R +S+++SRSR+ R E+++ + ++ K+L + + R+ ++
Sbjct: 289 RSPSRHKSKSKSRSRSQERRVEEEKRGSVSRGRSQ-EKSLRQSR----SRSRSKGGSRSR 343
Query: 211 SRGIGVSSN---GAKPELSEKVTEDGTRNPNEKPTQQRSIAFSSNNSVAKPIQKSAKAAT 267
SR S + G K E + +R+ +E+ ++ S +S A +K K T
Sbjct: 344 SRSRSKSKDKRKGRKRSREESRSRSRSRSKSERSRKRG----SKRDSKAGSSKKKKKEDT 399
Query: 268 EEASSRSP 275
+ + SRSP
Sbjct: 400 DRSQSRSP 407
Score = 57.0 bits (136), Expect = 2e-08
Identities = 61/172 (35%), Positives = 72/172 (41%), Gaps = 56/172 (32%)
Query: 11 GSPQEKD---SPSTSRSGGSSRLSSRSRSRSFSRS-----SRSHSRVSSRFSSRSRRSKS 62
G QEK S S SRS G SR SRSRS+S + SR SR SR S+S RS+
Sbjct: 320 GRSQEKSLRQSRSRSRSKGGSRSRSRSRSKSKDKRKGRKRSREESRSRSRSRSKSERSRK 379
Query: 63 R-----------------------SRSRRRHQRKYRRYSRSYS----------------- 82
R SRS R K R +++S S
Sbjct: 380 RGSKRDSKAGSSKKKKKEDTDRSQSRSPSRSVSKEREHAKSESSQREGRGESENAGTNQE 439
Query: 83 -RSRSRSRSR-------RYRERRYGFTRRYYRSPSRYRSRSRSRSRSRGRSY 126
RSRSRS S+ R R ++ RS SR RS SRS SRSR RS+
Sbjct: 440 TRSRSRSNSKSKPNLPSESRSRSKSASKTRSRSKSRSRSASRSPSRSRSRSH 491
Score = 57.0 bits (136), Expect = 2e-08
Identities = 41/113 (36%), Positives = 55/113 (48%), Gaps = 3/113 (2%)
Query: 7 DMWPGSPQEKDSPSTSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRS 66
D GS ++K T RS S S S+ R ++S S + ++RSRS
Sbjct: 385 DSKAGSSKKKKKEDTDRSQSRSPSRSVSKEREHAKSESSQREGRGESENAGTNQETRSRS 444
Query: 67 RRRHQRKYRRYSRSYSRSRSRSRSRRYRERRYGFTRRYYRSPSRYRSRSRSRS 119
R + K S S SRS+S S++R + R +R RSPSR RSRS SRS
Sbjct: 445 RSNSKSKPNLPSESRSRSKSASKTRSRSKSR---SRSASRSPSRSRSRSHSRS 494
Score = 45.8 bits (107), Expect = 4e-05
Identities = 49/200 (24%), Positives = 80/200 (40%), Gaps = 41/200 (20%)
Query: 89 RSRRYRERRYGFTRRYYRSPSRYRSRSRSRSR----SRGRSYCGRAYAIARGQRYYGFGR 144
R R E + G RR S SR SRSRSRSR SR RS ++
Sbjct: 168 RKIRLVEDKPGSRRRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKS-------------- 213
Query: 145 TVYPEEHSRWRDRSRTRSRSRTPFRLSEKDRMELLEIAKTNAAKALGTTNIDLPASLRTV 204
HS+ R RSR+ SRSR+ R + R + + +K
Sbjct: 214 -----SHSKSRSRSRSGSRSRSKSRSRSQSRSRSKKEKSRSPSK---------------- 252
Query: 205 PSAKETSRGIGVSSNGAKPELSEKV-TEDGTRNPNEK-PTQQRSIAFSSNNSVAKPIQKS 262
++ S G S + +K + EK+ D P + P++ +S + S + S + +++
Sbjct: 253 EKSRSRSHSAGKSRSKSKDQAEEKIQNNDNVGKPKSRSPSRHKSKSKSRSRSQERRVEEE 312
Query: 263 AKAATEEASSRSPKIDQKKS 282
+ + S+ + Q +S
Sbjct: 313 KRGSVSRGRSQEKSLRQSRS 332
>gi|133922600 splicing factor, arginine/serine-rich 16 [Homo
sapiens]
Length = 674
Score = 92.4 bits (228), Expect = 4e-19
Identities = 83/223 (37%), Positives = 108/223 (48%), Gaps = 11/223 (4%)
Query: 10 PGSPQEKDSPSTSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRSRRR 69
P +P + P+ R+ + R SS S S S S S S SR SSR SSRSRR RS R
Sbjct: 356 PPAPPQPGGPAPGRNASARRRSSSSSSSS-SASRTSSSRSSSRSSSRSRRGGGYYRSGRH 414
Query: 70 HQRKYRRYSRSYSRSRSRSRSR-RYRERRYGFTR---RYYRSPSRYRSRSRSRSRSRGRS 125
+ + R +SRS SRSR SRSR R R G +R RY RSP+R R R RSR RS
Sbjct: 415 ARSRSRSWSRSRSRSRRYSRSRSRGRRHSGGGSRDGHRYSRSPAR-RGGYGPRRRSRSRS 473
Query: 126 YCGRAYAI-ARGQRYYGFGRTVYPEEHSRWRDRSRTRSRSRTPFRLSEKDRMELLEIAKT 184
+ G Y RG R++ R+ S R RS TRSRS +P + R
Sbjct: 474 HSGDRYRRGGRGLRHHSSSRSRSSWSLSPSRSRSLTRSRSHSPSPSQSRSRS---RSRSQ 530
Query: 185 NAAKALGTTNIDLPASLRTV-PSAKETSRGIGVSSNGAKPELS 226
+ + + + PA+ V K+T G + AKP+L+
Sbjct: 531 SPSPSPAREKLTRPAASPAVGEKLKKTEPAAGKETGAAKPKLT 573
Score = 40.0 bits (92), Expect = 0.002
Identities = 29/78 (37%), Positives = 38/78 (48%), Gaps = 12/78 (15%)
Query: 44 RSHSRVSSRFSSRSRRSKSRSRSRRRHQRKYRRYSRSYSRSRSRSRSRRYRERRYGFTRR 103
+ H R R+ K R + R R +++ + R YSR +SRS S RY R Y +RR
Sbjct: 604 QEHERQEREDELRAMARKIRMKERERREKEREEWERQYSR-QSRSPSPRY-SREYSSSRR 661
Query: 104 YYRSPSRYRSRSRSRSRS 121
RSRSRSRS
Sbjct: 662 ----------RSRSRSRS 669
Score = 40.0 bits (92), Expect = 0.002
Identities = 25/51 (49%), Positives = 28/51 (54%), Gaps = 8/51 (15%)
Query: 52 RFSSRSRRSKSRSRSRRRHQRKYR----RYSRSYS----RSRSRSRSRRYR 94
R R RR K R R++ R+ R RYSR YS RSRSRSRS YR
Sbjct: 623 RMKERERREKEREEWERQYSRQSRSPSPRYSREYSSSRRRSRSRSRSPHYR 673
Score = 37.4 bits (85), Expect = 0.016
Identities = 28/97 (28%), Positives = 42/97 (43%), Gaps = 16/97 (16%)
Query: 40 SRSSRSHSRVSSRFSSRSRRSKSRSRSRRRHQRKYRRYSRSYSRSRSRSRSRRYRERRY- 98
++ + ++ F R+ K + + + H + YS RSR + R +RE+R
Sbjct: 222 NKQATTYGMADGDFVRMLRKDKEEAEAIK-HAKALEEEKAMYSGRRSRRQRREFREKRLR 280
Query: 99 -------GFTRR-------YYRSPSRYRSRSRSRSRS 121
+ RR Y RSPS S SRSRSRS
Sbjct: 281 GRKISPPSYARRDSPTYDPYKRSPSESSSESRSRSRS 317
Score = 33.5 bits (75), Expect = 0.22
Identities = 31/123 (25%), Positives = 54/123 (43%), Gaps = 12/123 (9%)
Query: 11 GSPQEKDSPSTSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRSRRRH 70
G +K P+ + G+++ + + R ++ +R +F + +++ ++ H
Sbjct: 551 GEKLKKTEPAAGKETGAAKPKLTPQEKLKLRMQKALNR---QFKA-DKKAAQEKMIQQEH 606
Query: 71 QRKYRRYSRSYSRSRSRSRSRRYRERRYGFTRRYY----RSP----SRYRSRSRSRSRSR 122
+R+ R + R + R RE+ R Y RSP SR S SR RSRSR
Sbjct: 607 ERQEREDELRAMARKIRMKERERREKEREEWERQYSRQSRSPSPRYSREYSSSRRRSRSR 666
Query: 123 GRS 125
RS
Sbjct: 667 SRS 669
>gi|20127499 arginine/serine-rich splicing factor 6 [Homo sapiens]
Length = 344
Score = 81.6 bits (200), Expect = 7e-16
Identities = 66/165 (40%), Positives = 88/165 (53%), Gaps = 26/165 (15%)
Query: 18 SPSTSRSGGSSRLSSRSRSRSFSRS---SRSHSRVSSRFSSRSRRSKSRSRSRRRHQRKY 74
S S RS SR SSRSRSRS S+S SRS S+ SR S+ R+S+S+S+S+ + R
Sbjct: 198 SRSRRRSRSRSRRSSRSRSRSISKSRSRSRSRSKGRSRSRSKGRKSRSKSKSKPKSDRGS 257
Query: 75 RRYSRS-----YSRSRSRSRSRRYRERRYGFTRRYYRSPSRYRSRSRSRSRSRGRSYCGR 129
+SRS Y +SRSRSRSR +E G +S+SRSRS+SR S
Sbjct: 258 HSHSRSRSKDEYEKSRSRSRSRSPKENGKG----------DIKSKSRSRSQSRSNSPLPV 307
Query: 130 AYAIARGQRYYGFGRTVYPEEHSRWRDRSRTRSRSRTPFRLSEKD 174
+ AR P + + R RSR+RS+SR+ R S +D
Sbjct: 308 PPSKARS--------VSPPPKRATSRSRSRSRSKSRSRSRSSSRD 344
Score = 61.6 bits (148), Expect = 8e-10
Identities = 46/122 (37%), Positives = 64/122 (52%), Gaps = 8/122 (6%)
Query: 45 SHSRVSSRFSSRSRRSKSRSRSRRRHQRKYRRYSRSYSRSRSRSRSRRYRERRYGFTRRY 104
SH R +S RS+SR RSR R +R R SRS S+SRSRSRSR R R
Sbjct: 186 SHRR---SYSGSRSRSRSRRRSRSRSRRSSRSRSRSISKSRSRSRSRSKGRSRSRSKGRK 242
Query: 105 YRSPSRYRSRSRSRSRSRGRSYCGRAYAIARGQRYYGFGRTVYPEEHSRWRDRSRTRSRS 164
RS S+ + +S S S RS Y +R + R+ P+E+ + +S++RSRS
Sbjct: 243 SRSKSKSKPKSDRGSHSHSRSRSKDEYEKSRSR-----SRSRSPKENGKGDIKSKSRSRS 297
Query: 165 RT 166
++
Sbjct: 298 QS 299
Score = 42.4 bits (98), Expect = 5e-04
Identities = 74/297 (24%), Positives = 114/297 (38%), Gaps = 55/297 (18%)
Query: 11 GSPQEKDSPST-SRSGGSSRLSSRSRSRS-FSRSSRSHSRV-----SSRFSSRSRRSKSR 63
G +++D S SRSGG S R+ R + R+ R+ SSR S + + R
Sbjct: 72 GPRRDRDGYSYGSRSGGGGYSSRRTSGRDKYGPPVRTEYRLIVENLSSRCSWQDLKDFMR 131
Query: 64 SRSRRRHQRKYRRYS-------RSYSRSRS----------RSRSRRYRERRYGFTRRYYR 106
+ ++ + RSYS + R+ R E + + R
Sbjct: 132 QAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTEINGRNIRLIEDKPRTSHRRSY 191
Query: 107 SPSRYRSRSRSRSRSRG-RSYCGRAYAIARGQRYYGFGRTVYPEEHSRWRDRSRTRSRSR 165
S SR RSRSR RSRSR RS R+ +I++ + SR R RS+ RSRSR
Sbjct: 192 SGSRSRSRSRRRSRSRSRRSSRSRSRSISKSR--------------SRSRSRSKGRSRSR 237
Query: 166 TPFRLSEKDRMELLEIAKTNAAKALGTTNIDLPASLRTVPSAKETSRGIGVSSNGAKPEL 225
+ R S +K+ G+ + S ++ SR NG
Sbjct: 238 SKGRKSRSK-------SKSKPKSDRGSHSHSRSRSKDEYEKSRSRSRSRSPKENGKGDIK 290
Query: 226 SEKVTEDGTRNPNEKPTQQRSIAFSSNNSVAKPIQKSAKAATEEASSRSPKIDQKKS 282
S+ + +R+ + P S A+ + K AT + SRS + +S
Sbjct: 291 SKSRSRSQSRSNSPLPVPP---------SKARSVSPPPKRATSRSRSRSRSKSRSRS 338
Score = 29.3 bits (64), Expect = 4.2
Identities = 17/34 (50%), Positives = 19/34 (55%)
Query: 10 PGSPQEKDSPSTSRSGGSSRLSSRSRSRSFSRSS 43
P S SP R+ SR SRS+SRS SRSS
Sbjct: 308 PPSKARSVSPPPKRATSRSRSRSRSKSRSRSRSS 341
>gi|154146223 splicing factor, arginine/serine-rich 130 [Homo
sapiens]
Length = 805
Score = 81.3 bits (199), Expect = 9e-16
Identities = 90/291 (30%), Positives = 133/291 (45%), Gaps = 29/291 (9%)
Query: 14 QEKDSPSTSRSGGSSRLSSRSRSRSFSRSSR------SHSRVSSRFSSRS---RRSKSRS 64
+EK+ SRSG SS SS S SR+ S SS S S SSR SSRS +R K S
Sbjct: 500 KEKEKQGRSRSGSSSSGSSSSNSRTSSTSSTVSSSSYSSSSGSSRTSSRSSSPKRKKRHS 559
Query: 65 RSRRRHQRKYRRYSRSYS--------RSRSRSRSRRYRERR-YGFTRRYYRSPSRYRSRS 115
RSR + R SRSYS R+R + R RR R RR RSPSR R RS
Sbjct: 560 RSRSPTIKARRSRSRSYSRRIKIESNRARVKIRDRRRSNRNSIERERRRNRSPSRERRRS 619
Query: 116 RSRSRSRGRSYCGRAYAIAR----GQRYYGFGRTVYPEEHSRWRDRSRTRSRSRTPFRLS 171
RSRSR R + R+ + R QR G + + ++ ++R + RSRS R
Sbjct: 620 RSRSRDRRTNRASRSRSRDRRKIDDQRGNLSGNSHKHKGEAKEQERKKERSRSIDKDR-K 678
Query: 172 EKDRMELLEIAKTNAAKALGTTNIDLPASLRTVPSAKETSRGIGVSSNGAKPELSEKVTE 231
+KD+ E K + + + + +E+ R S + +S K+
Sbjct: 679 KKDKEREREQDKRKEKQKREEKDFKFSSQDDRLKRKRESERTFSRSGS-----ISVKIIR 733
Query: 232 DGTRNPNEKPTQQRSIAFSSNNSVAKPIQKSAKAATEEASSRSPKIDQKKS 282
+R ++K T + S S ++S + +S +++E ++ PK + +S
Sbjct: 734 HDSRQDSKKSTTKDSKKHSGSDSSGRSSSES-PGSSKEKKAKKPKHSRSRS 783
Score = 32.0 bits (71), Expect = 0.65
Identities = 22/69 (31%), Positives = 30/69 (43%)
Query: 12 SPQEKDSPSTSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRSRRRHQ 71
S Q+ +T S S S RS S S S + SRSR + RS ++
Sbjct: 736 SRQDSKKSTTKDSKKHSGSDSSGRSSSESPGSSKEKKAKKPKHSRSRSVEKSQRSGKKAS 795
Query: 72 RKYRRYSRS 80
RK++ SRS
Sbjct: 796 RKHKSKSRS 804
Score = 30.8 bits (68), Expect = 1.5
Identities = 19/58 (32%), Positives = 28/58 (48%)
Query: 12 SPQEKDSPSTSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRSRRR 69
S + S S+ RS S SS+ + + SRS S S+ S + K +S+SR R
Sbjct: 748 SKKHSGSDSSGRSSSESPGSSKEKKAKKPKHSRSRSVEKSQRSGKKASRKHKSKSRSR 805
Score = 29.6 bits (65), Expect = 3.2
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 15/56 (26%)
Query: 10 PGSPQEKDSPSTSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSR 65
PGS +EK ++ SRSRS +S RS + +SR +SKSRSR
Sbjct: 765 PGSSKEK----------KAKKPKHSRSRSVEKSQRSGKK-----ASRKHKSKSRSR 805
>gi|154146193 splicing factor, arginine/serine-rich 130 [Homo
sapiens]
Length = 805
Score = 81.3 bits (199), Expect = 9e-16
Identities = 90/291 (30%), Positives = 133/291 (45%), Gaps = 29/291 (9%)
Query: 14 QEKDSPSTSRSGGSSRLSSRSRSRSFSRSSR------SHSRVSSRFSSRS---RRSKSRS 64
+EK+ SRSG SS SS S SR+ S SS S S SSR SSRS +R K S
Sbjct: 500 KEKEKQGRSRSGSSSSGSSSSNSRTSSTSSTVSSSSYSSSSGSSRTSSRSSSPKRKKRHS 559
Query: 65 RSRRRHQRKYRRYSRSYS--------RSRSRSRSRRYRERR-YGFTRRYYRSPSRYRSRS 115
RSR + R SRSYS R+R + R RR R RR RSPSR R RS
Sbjct: 560 RSRSPTIKARRSRSRSYSRRIKIESNRARVKIRDRRRSNRNSIERERRRNRSPSRERRRS 619
Query: 116 RSRSRSRGRSYCGRAYAIAR----GQRYYGFGRTVYPEEHSRWRDRSRTRSRSRTPFRLS 171
RSRSR R + R+ + R QR G + + ++ ++R + RSRS R
Sbjct: 620 RSRSRDRRTNRASRSRSRDRRKIDDQRGNLSGNSHKHKGEAKEQERKKERSRSIDKDR-K 678
Query: 172 EKDRMELLEIAKTNAAKALGTTNIDLPASLRTVPSAKETSRGIGVSSNGAKPELSEKVTE 231
+KD+ E K + + + + +E+ R S + +S K+
Sbjct: 679 KKDKEREREQDKRKEKQKREEKDFKFSSQDDRLKRKRESERTFSRSGS-----ISVKIIR 733
Query: 232 DGTRNPNEKPTQQRSIAFSSNNSVAKPIQKSAKAATEEASSRSPKIDQKKS 282
+R ++K T + S S ++S + +S +++E ++ PK + +S
Sbjct: 734 HDSRQDSKKSTTKDSKKHSGSDSSGRSSSES-PGSSKEKKAKKPKHSRSRS 783
Score = 32.0 bits (71), Expect = 0.65
Identities = 22/69 (31%), Positives = 30/69 (43%)
Query: 12 SPQEKDSPSTSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRSRRRHQ 71
S Q+ +T S S S RS S S S + SRSR + RS ++
Sbjct: 736 SRQDSKKSTTKDSKKHSGSDSSGRSSSESPGSSKEKKAKKPKHSRSRSVEKSQRSGKKAS 795
Query: 72 RKYRRYSRS 80
RK++ SRS
Sbjct: 796 RKHKSKSRS 804
Score = 30.8 bits (68), Expect = 1.5
Identities = 19/58 (32%), Positives = 28/58 (48%)
Query: 12 SPQEKDSPSTSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRSRRR 69
S + S S+ RS S SS+ + + SRS S S+ S + K +S+SR R
Sbjct: 748 SKKHSGSDSSGRSSSESPGSSKEKKAKKPKHSRSRSVEKSQRSGKKASRKHKSKSRSR 805
Score = 29.6 bits (65), Expect = 3.2
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 15/56 (26%)
Query: 10 PGSPQEKDSPSTSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSR 65
PGS +EK ++ SRSRS +S RS + +SR +SKSRSR
Sbjct: 765 PGSSKEK----------KAKKPKHSRSRSVEKSQRSGKK-----ASRKHKSKSRSR 805
>gi|38146107 arginine/serine-rich coiled-coil 2 isoform a [Homo
sapiens]
Length = 434
Score = 80.9 bits (198), Expect = 1e-15
Identities = 64/165 (38%), Positives = 85/165 (51%), Gaps = 7/165 (4%)
Query: 20 STSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRSRRRHQRKYRRYSR 79
S SRS R S+ +S +S + + S R R + S + RH+RK R+ SR
Sbjct: 63 SRSRSKEGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSEN-GEDRHKRKERKSSR 121
Query: 80 SYSRSRSRSRSRRYRERRYGFTRRYYRSPSRYRSRSRSRSRSRGRSYCGRAYAIARGQRY 139
S SRSRSR RR+R R R+ RS SR R +SRSRSR R +S R+ + R +R
Sbjct: 122 GRSHSRSRSRERRHRSR--SRERKKSRSRSRERKKSRSRSRERKKS---RSRSRERKRRI 176
Query: 140 YGFGRTVYPEEHSRWRDRSRTRSRSRTPFRLSEKDRMELLEIAKT 184
R+ H R R RSRTRSRSR + EK R +++T
Sbjct: 177 RSRSRSRSRHRH-RTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRT 220
Score = 73.6 bits (179), Expect = 2e-13
Identities = 64/169 (37%), Positives = 80/169 (47%), Gaps = 35/169 (20%)
Query: 6 NDMWPGSPQEKDSPSTSRSGGS-----SRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRS 60
ND S + ++ ++S +G R SSR RS S SRS R SR R
Sbjct: 89 NDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRSRERRHRSRSR-----ERK 143
Query: 61 KSRSRSRRRHQRKYRRYSRSYSRSRSRSRSRRYRERRYGFTRRYYRSPSRYRSRSRSRSR 120
KSRSRSR R + + R R SRSRSR R RR R R RS SR+R R+RSRSR
Sbjct: 144 KSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRS--------RSRSRHRHRTRSRSR 195
Query: 121 SRGRSYCGRAYAIARGQRYYGFGRTVYPEEHSRWRDRSRTRSRSRTPFR 169
+R RS R I + +R+ RS +R+ S PFR
Sbjct: 196 TRSRSR-DRKKRIEKPRRF----------------SRSLSRTPSPPPFR 227
Score = 38.9 bits (89), Expect = 0.005
Identities = 57/258 (22%), Positives = 99/258 (38%), Gaps = 47/258 (18%)
Query: 62 SRSRSRRRHQRKY----RRYSRSYSRSRSRSRSRRYRERRYGFTRRYYRSPSRYRSRSRS 117
S R +++ Q + R YSRSRSRSR R+ + G ++RSRSRS
Sbjct: 17 SPDRDKKKEQSEVSVSPRASKHHYSRSRSRSRERKRKSDNEG---------RKHRSRSRS 67
Query: 118 RSRSRGRS------------YCGRAYAIARGQRYY-----GFGRTVYPEEHS-------- 152
+ R S + + ++ +G+ G R E S
Sbjct: 68 KEGRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSR 127
Query: 153 ------RWRDRSRTRSRSRTPFRLSEKDRMELLEIAKTNAAKALGTTNIDLPASLRTVPS 206
R R RSR R +SR+ R +K R E K+ + I + R+
Sbjct: 128 SRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHR 187
Query: 207 AKETSRGIGVSSNGAKPELSEK---VTEDGTRNPNEKPTQQRSIAFSSNNSVAKPIQKSA 263
+ SR S + + + EK + +R P+ P + R+ A + ++A+ ++++
Sbjct: 188 HRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEALARRLERAK 247
Query: 264 KAATEEASSRSPKIDQKK 281
K + K Q++
Sbjct: 248 KLQEQREKEMVEKQKQQE 265
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 79.7 bits (195), Expect = 3e-15
Identities = 94/295 (31%), Positives = 131/295 (44%), Gaps = 32/295 (10%)
Query: 12 SPQEKD-SPSTSRSGGSSRLSSRSRSRSFS-RSSRSHSRVS-----SRFSSRSRRSKSRS 64
SPQ + S S R G S +++ R RS S R RSHSR SR + +RR +SRS
Sbjct: 527 SPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRS 586
Query: 65 RSRRRHQRKYRRYSRSYSRSRSRSRSRRYRERRYGFTRRYYRSPSRYRSRSRSRSRSRGR 124
R+ R + + R +R SRSR+ +R R R R R RSP R RSRSRS +R GR
Sbjct: 587 RTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGR 646
Query: 125 SYCGRAYAIARGQRYYGFGRTVYPEEHSRWRDRSRT------RSRSRTPFRLS-EKDRME 177
S R+ AR GR+ R R RSRT RSRSRTP R + R
Sbjct: 647 S---RSRTPARR------GRSRSRTPARRGRSRSRTPARRSGRSRSRTPARRGRSRSRTP 697
Query: 178 LLEIAKTNAAKALGTTNIDLPASLRTVPSAKETSRGIGVSS----NGAKPELSE-KVTED 232
+++ + G ++ P S+ E S + + PE+ + +++
Sbjct: 698 RRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQRRSRSNSSPEMKKSRISSR 757
Query: 233 GTR---NPNEKPTQQRSIAFSSNNSVAKPIQKSAKAATEEAS-SRSPKIDQKKSP 283
+R +P K + S+ S + S P QKS S S PK + P
Sbjct: 758 RSRSLSSPRSKAKSRLSLRRSLSGSSPCPKQKSQTPPRRSRSGSSQPKAKSRTPP 812
Score = 75.9 bits (185), Expect = 4e-14
Identities = 80/291 (27%), Positives = 123/291 (42%), Gaps = 27/291 (9%)
Query: 13 PQEKDSPSTS--------RSGGSSRLSSRSRSRSFSRSSRSHS---RVSSRFSSRSRRSK 61
P+ + SPS S RS R +S R+++ SR RS S R R SRSRR K
Sbjct: 1722 PRHRRSPSVSSPEPAEKSRSSRRRRSASSPRTKTTSRRGRSPSPKPRGLQRSRSRSRREK 1781
Query: 62 SRSRSRRRHQRKYRRYSRSYSRSRSRSRSRRYRERRYGFTRRYYRSPSRYRSRSRSRSRS 121
+R+ RR + SR RSRSRSR R RR G + + RSP+R S S R
Sbjct: 1782 TRTTRRRDRSGSSQSTSRRRQRSRSRSRVTR---RRRGGSGYHSRSPARQESSRTSSRRR 1838
Query: 122 RGRSYCGRAYAIARGQRYYGFGRTVYPEEHSRWRDRSRTRSRSRTPFRLSEKDRMELLEI 181
RGRS R +R + + SR + RSRSRTP + R +
Sbjct: 1839 RGRS---RTPPTSRKRSRSRTSPAPWKRSRSRASPATHRRSRSRTPLISRRRSRSRTSPV 1895
Query: 182 AKTNAAKALGTT-----NIDLPAS-----LRTVPSAKETSRGIGVSSNGAKPELSEKVTE 231
++ + T + P S RT P + SR ++ + VT
Sbjct: 1896 SRRRSRSRTSVTRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTR 1955
Query: 232 DGTRNPNEKPTQQRSIAFSSNNSVAKPIQKSAKAATEEASSRSPKIDQKKS 282
+R+ T++RS + +S + + +++ + SR+ + +++S
Sbjct: 1956 RRSRSRTPPVTRRRSRSRTSPITRRRSRSRTSPVTRRRSRSRTSPVTRRRS 2006
Score = 75.1 bits (183), Expect = 7e-14
Identities = 82/282 (29%), Positives = 131/282 (46%), Gaps = 25/282 (8%)
Query: 18 SPSTSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSR-----RSKSRSRSRRRHQR 72
+P+ RS + RSRSR+ +R RS SR +R SR+R RS+SRS +RR +
Sbjct: 588 TPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRS 647
Query: 73 KYRRYSRSYSRSRSRSRSRRYRERRYGFTRRYYRSPSRY-----RSRSRS--RSRSRGRS 125
+ R +R RSRSR+ +RR R R RR RS SR RSRSR+ R RSR RS
Sbjct: 648 RSRTPARR-GRSRSRTPARRGRSRSRTPARRSGRSRSRTPARRGRSRSRTPRRGRSRSRS 706
Query: 126 YC--GRAYAIARGQRYYGFGRTVYPEEHSRWRDRSRTRSRSRTPFRLSEKDRMELLEIAK 183
GR+++ +R GR+ E S+ RSRS + + +K R+
Sbjct: 707 LVRRGRSHSRTPQRR----GRSGSSSERKNKSRTSQRRSRSNSSPEM-KKSRISSRRSRS 761
Query: 184 TNAAKALGTTNIDLPASL---RTVPSAKETSRGIGVSSNGAKPELSEKVTEDGTRNPNEK 240
++ ++ + + L SL P K + S ++P+ + +R+ +
Sbjct: 762 LSSPRSKAKSRLSLRRSLSGSSPCPKQKSQTPPRRSRSGSSQPKAKSRTPPRRSRSSSSP 821
Query: 241 PTQQRSIAFSSNNSVAKPIQKSAKAAT--EEASSRSPKIDQK 280
P +Q+S S + + K+ T + S SP+ +++
Sbjct: 822 PPKQKSKTPSRQSHSSSSPHPKVKSGTPPRQGSITSPQANEQ 863
Score = 74.3 bits (181), Expect = 1e-13
Identities = 87/289 (30%), Positives = 122/289 (42%), Gaps = 29/289 (10%)
Query: 12 SPQEKDSPSTSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRSRRRHQ 71
SPQ + S S R G S R RSRS R S SR + R + RSRS RR
Sbjct: 510 SPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQR--------RGRSRSARRG- 560
Query: 72 RKYRRYSRSYSRSRSRSRSRRYRERRYGFTRRYYRS--PSRYRSRSR------------- 116
R + R + RSRSR+ +RR R R RR RS P+R RSRSR
Sbjct: 561 RSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTP 620
Query: 117 SRSRSRGRSYCGRAYAIARGQRYYGFGRTVYPEEHSRWRDRS---RTRSRSRTPFRLSEK 173
+R RSR RS R R G R+ P R R R+ R RSRSRTP R S +
Sbjct: 621 ARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRSGR 680
Query: 174 DRMELLEIAKTNAAKALGTTNIDLPASLRTVPSAKETSRGIGVSSNGAKPELSEKVTEDG 233
R + ++ + +R S T + G S + ++ + + ++
Sbjct: 681 SRSRTPARRGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQRR 740
Query: 234 TRNPNEKPTQQRSIAFSSNNSVAKPIQ--KSAKAATEEASSRSPKIDQK 280
+R+ + ++ I+ + S++ P KS + S SP QK
Sbjct: 741 SRSNSSPEMKKSRISSRRSRSLSSPRSKAKSRLSLRRSLSGSSPCPKQK 789
Score = 72.8 bits (177), Expect = 3e-13
Identities = 80/278 (28%), Positives = 117/278 (42%), Gaps = 23/278 (8%)
Query: 18 SPSTSRSGGSSR---LSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRSRRRHQRKY 74
S + SR G SR + R RSRS + + R HSR S RSR ++ RSR +R
Sbjct: 474 SHTPSRRMGRSRSPATAKRGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWGRSRSPQRRGR 533
Query: 75 RRYSRSYSRSRSRSRSRRYRERRYGFTRRYYRSP-SRYRSRSRS---RSRSRGRSYCGRA 130
R + SRSR+ RR R R R + RSP +R RSRSR+ R RSR R+ R
Sbjct: 534 SRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRR 593
Query: 131 YAIARGQRYYGFGRTVYPEEHSRWRDRSRTRSRSRTPFRLSEKDRMELLEIAKTNAAKAL 190
R RT SR R +R RSR+R+P R + R + A+
Sbjct: 594 SRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSR---------SPARRS 644
Query: 191 GTTNIDLPASLRTVPSAKETSRGIGVS------SNGAKPELSEKVTEDGTRNPNEKPTQQ 244
G + PA S RG S S ++ + +R P ++
Sbjct: 645 GRSRSRTPARRGRSRSRTPARRGRSRSRTPARRSGRSRSRTPARRGRSRSRTPRRGRSRS 704
Query: 245 RSIAFSSNNSVAKPIQKSAKAATEEASSRSPKIDQKKS 282
RS+ + P ++ ++ E ++S + Q++S
Sbjct: 705 RSLVRRGRSHSRTPQRRGRSGSSSERKNKS-RTSQRRS 741
Score = 71.2 bits (173), Expect = 1e-12
Identities = 88/302 (29%), Positives = 135/302 (44%), Gaps = 53/302 (17%)
Query: 18 SPSTSRSGGSSRLSSRSRSRSFSRSSR-SHSRVSSRFSSRSR------RSKSRSRSRRRH 70
SP+T S + R RSRS + + R S SR +R SRSR RS+SR+ +RRR
Sbjct: 566 SPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRS 625
Query: 71 QRK--YRRYSRSYS-----------------RSRSRSRSRRYRERRYGFTRRYYRSPSR- 110
+ + RR SRS S RSRSR+ +RR R R RR RS SR
Sbjct: 626 RTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRSGRSRSRT 685
Query: 111 --YRSRSRSRSRSRGRSYCGRAYAIARGQRYYGFGRTVYPEEHSRWRDRSRTRSRSRTPF 168
R RSRSR+ RGRS R+ ++ R R + RT P+ R S +++SRT
Sbjct: 686 PARRGRSRSRTPRRGRS---RSRSLVRRGRSH--SRT--PQRRGRSGSSSERKNKSRTSQ 738
Query: 169 RLSEKDRMELLEIAKTNAAKALGTTNIDLPASLRTVPSAKETSR-GIGVSSNGAKP---- 223
R S + ++ ++ ++ ++ ++ P +K SR + S +G+ P
Sbjct: 739 RRSRSNSSPEMKKSRISSRRSRSLSS----------PRSKAKSRLSLRRSLSGSSPCPKQ 788
Query: 224 --ELSEKVTEDGTRNPNEKPTQQRSIAFSSNNSVAKPIQKSAKAATEEASSRSPKIDQKK 281
+ + + G+ P K + SS++ K K+ + +SS PK+
Sbjct: 789 KSQTPPRRSRSGSSQPKAKSRTPPRRSRSSSSPPPKQKSKTPSRQSHSSSSPHPKVKSGT 848
Query: 282 SP 283
P
Sbjct: 849 PP 850
Score = 67.8 bits (164), Expect = 1e-11
Identities = 99/318 (31%), Positives = 125/318 (39%), Gaps = 56/318 (17%)
Query: 14 QEKDSPSTSRSGGSSRLSSRSRSRSFSRSS-----RSHSRVSSRFSSRSRR-----SKSR 63
QE S+ R G SR SR RS SR+S RS SR S RSR S+ R
Sbjct: 1828 QESSRTSSRRRRGRSRTPPTSRKRSRSRTSPAPWKRSRSRASPATHRRSRSRTPLISRRR 1887
Query: 64 SRSR-----RRHQRKYRRYSRSYSRSRS------RSRSR-----RYRER-RYGFTRRYYR 106
SRSR RR R +R SRSR+ RSRSR R R R R TRR R
Sbjct: 1888 SRSRTSPVSRRRSRSRTSVTRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSR 1947
Query: 107 S----PSRYRSRSRS------RSRSR-----GRSYCGRAYAIARGQRYYGFGRTVYPEEH 151
S +R RSRSR+ RSRSR R R + R +
Sbjct: 1948 SRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRRSRSRTSPVTRRRSRSRTSPVTRRRSR 2007
Query: 152 SRWRDRSRTRSRSRTP--FRLSEKDRMELLEIAKTNAAKALGTTNIDLPASLRTVPSAKE 209
SR +R RSRSRTP R + R LL ++ + L + RT +
Sbjct: 2008 SRTSPVTRRRSRSRTPPAIRRRSRSRTPLLPRKRSRSRSPLAIRRRSRSRTPRTARGKRS 2067
Query: 210 TSRGIGV----SSNGAKPELSEKVTEDGTRNPNEKPT------QQRSIAFSSNNSVAKPI 259
+R S++G+ + S T TRN + T R FS + P+
Sbjct: 2068 LTRSPPAIRRRSASGSSSDRSRSATPPATRNHSGSRTPPVALNSSRMSCFSRPSMSPTPL 2127
Query: 260 QKSAKAATEE--ASSRSP 275
+ E SSR+P
Sbjct: 2128 DRCRSPGMLEPLGSSRTP 2145
Score = 66.6 bits (161), Expect = 2e-11
Identities = 85/288 (29%), Positives = 119/288 (41%), Gaps = 33/288 (11%)
Query: 13 PQEKDSPSTSRSGGSSRLSSRSRSRSFSRSSRSHS----RVSSRFSSRSRRSKSRSRSRR 68
P+ + S S+ +RLS RSRS S S +RS + R S SS KSRS RR
Sbjct: 1686 PRRRSSRSSPELTRKARLSRRSRSASSSPETRSRTPPRHRRSPSVSSPEPAEKSRSSRRR 1745
Query: 69 RHQRKYRRYS------------RSYSRSRSRSRSRRYRERRYGFTRRYYRSPSRYRSRSR 116
R R + R RSRSRSR + R R +S SR R RSR
Sbjct: 1746 RSASSPRTKTTSRRGRSPSPKPRGLQRSRSRSRREKTRTTRRRDRSGSSQSTSRRRQRSR 1805
Query: 117 SRSRSRGRSYCGRAYAIARGQRYYGFGRTVYPEEHSRWRDRSRTRSRSRTPFRLSEKDRM 176
SRSR R G Y R+ +E SR R R R RSRTP ++ R
Sbjct: 1806 SRSRVTRRRRGGSGY----------HSRSPARQESSRTSSR-RRRGRSRTPPTSRKRSRS 1854
Query: 177 ELLEIA-KTNAAKALGTTNIDLPASLRTVPSAKETSRGIGVSSNGAKPELSEKVTEDGTR 235
K + ++A T+ + + + SR VS ++ S VT +R
Sbjct: 1855 RTSPAPWKRSRSRASPATHRRSRSRTPLISRRRSRSRTSPVSRRRSRSRTS--VTRRRSR 1912
Query: 236 NPNEKPTQQRSIAFSSNNSVAKPIQKSAKAATEEAS-SRSPKIDQKKS 282
+ +++RS S V + +S T S SR+P + +++S
Sbjct: 1913 SRASPVSRRRS--RSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRRRS 1958
Score = 60.1 bits (144), Expect = 2e-09
Identities = 65/192 (33%), Positives = 83/192 (43%), Gaps = 28/192 (14%)
Query: 12 SPQEKDSPSTSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRSRRRHQ 71
S E PS + S SS S + + SH +SS +S++R R +
Sbjct: 416 SSSESSPPSPQPTKVSRHASSSPESPKPAPAPGSHREISSSPTSKNRSHGRAKRDKSHSH 475
Query: 72 RKYRRYSRSYS-------RSRSR-------SRSRRYRERRYGFTRRYYRSPS---RYRSR 114
RR RS S RSRSR SRSR + RR +R+ RS S R RSR
Sbjct: 476 TPSRRMGRSRSPATAKRGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWGRSRSPQRRGRSR 535
Query: 115 SRSR---SRSRGRSYCGRAYAIARGQRY------YGFGRTVYPEEHSRWRDR--SRTRSR 163
S R SRSR GR+ + RG+ + G R+ P R R R +R RSR
Sbjct: 536 SPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSR 595
Query: 164 SRTPFRLSEKDR 175
SRTP R + R
Sbjct: 596 SRTPTRRRSRSR 607
Score = 59.3 bits (142), Expect = 4e-09
Identities = 75/276 (27%), Positives = 108/276 (39%), Gaps = 54/276 (19%)
Query: 11 GSPQEKDSPSTSRSGGSSRLSSRSRSRSFSRS-SRSHSRVSSRFSSRSRRSKSRSRSRRR 69
GS SP+ S +S R RSR+ S RS SR S RSR S++ + RR
Sbjct: 1817 GSGYHSRSPARQESSRTSSRRRRGRSRTPPTSRKRSRSRTSPAPWKRSR-SRASPATHRR 1875
Query: 70 HQRKYRRYSRSYSRSRSRSRSRRYRERRYGFTRRYYRSPSRYRSRSRSRSRSRGRSYCGR 129
+ + SR SRSR+ SRR R TRR RS + SR RSRSR+
Sbjct: 1876 SRSRTPLISRRRSRSRTSPVSRRRSRSRTSVTRRRSRSRASPVSRRRSRSRTP------- 1928
Query: 130 AYAIARGQRYYGFGRTVYPEEHSRWRDR---SRTRSRSRTPFRLSEKDRMELLEIAKTNA 186
P R R R +R RSRSRTP + R + + +
Sbjct: 1929 ------------------PVTRRRSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRS 1970
Query: 187 AKALGTTNIDLPASLRTVPSAKETSRGIGVSSNGAKPELSEKVTEDGTRNPNEKPTQQRS 246
RT P + SR + VT +R+ T++RS
Sbjct: 1971 RS-------------RTSPITRRRSR-----------SRTSPVTRRRSRSRTSPVTRRRS 2006
Query: 247 IAFSSNNSVAKPIQKSAKAATEEASSRSPKIDQKKS 282
+ +S + + ++ A + SR+P + +K+S
Sbjct: 2007 RSRTSPVTRRRSRSRTPPAIRRRSRSRTPLLPRKRS 2042
Score = 56.2 bits (134), Expect = 3e-08
Identities = 73/284 (25%), Positives = 112/284 (39%), Gaps = 30/284 (10%)
Query: 10 PGSPQEKDSPSTSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRS------KSR 63
P +P + P SRSG SS+ S S S S SR + R RS KSR
Sbjct: 1624 PKAPAPRALPRRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARRGSRSSPEPKTKSR 1683
Query: 64 SRSRRRHQR---KYRRYSRSYSRSRSRSRSRRYRERRYGFTRRYYRSPSRYRSRSRSRSR 120
+ RRR R + R +R RSRS S S R R R+ RSPS +SR
Sbjct: 1684 TPPRRRSSRSSPELTRKARLSRRSRSASSSPETRSRT---PPRHRRSPSVSSPEPAEKSR 1740
Query: 121 SRGRSYCGRAYAIARGQRYYGFGRTVYPEEHSRWRDRSRTRSRSRTPFRLSEKDRMELLE 180
S R R+ + R + GR+ P R RSR+RSR +DR +
Sbjct: 1741 SSRRR---RSASSPRTKTTSRRGRS--PSPKPRGLQRSRSRSRREKTRTTRRRDRSGSSQ 1795
Query: 181 IAKTNAAKALGTTNIDLPASLRTVPSAKETSRGIGVSSNGAKPELSEKVTEDGTRNPNEK 240
++ + + + G G S + S + + R +
Sbjct: 1796 STSRRRQRSRSRSRV-----------TRRRRGGSGYHSRSPARQESSRTSSRRRRGRSRT 1844
Query: 241 P--TQQRSIAFSSNNSVAKPIQKSAKAATEEASSRSPKIDQKKS 282
P +++RS + +S + +++ A + SR+P I +++S
Sbjct: 1845 PPTSRKRSRSRTSPAPWKRSRSRASPATHRRSRSRTPLISRRRS 1888
Score = 54.3 bits (129), Expect = 1e-07
Identities = 69/275 (25%), Positives = 117/275 (42%), Gaps = 28/275 (10%)
Query: 20 STSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRSRRRHQR----KYR 75
S+SRS + + + RS S R + SS+ ++ +S S S++R R K +
Sbjct: 178 SSSRSPTPKQKKKKKKKDRGRRSESSSPRRERKKSSKKKKHRSESESKKRKHRSPTPKSK 237
Query: 76 RYSRSYSRSRSRSRSRRYRERRYGFTRRYYRSPSRYRSRSRSRS---RSRGRSYCGRAYA 132
R S+ R RSRS + + RR + + S SRSRSRS ++ + GR+ +
Sbjct: 238 RKSKDKKRKRSRSTTPAPKSRRAHRSTSADSASSSDTSRSRSRSAAAKTHTTALAGRSPS 297
Query: 133 IARGQRYYGFGRTVYPEEHSRWRDRS--RTRSRSRTPFRLSEKDRMELLEIAKTNAAKAL 190
A G+R G P S R S + +P+ +KD+ E + + +
Sbjct: 298 PASGRRGEGDAPFSEPGTTSTQRPSSPETATKQPSSPYEDKDKDKKE-KSATRPSPSPER 356
Query: 191 GTTNIDLPASLRTVPSAKETSRGIGVSSNGAKPELSEKVTEDGTRNPNE-KPTQQRS--- 246
+T + PA P E G +P + ++++ P+E PT+ RS
Sbjct: 357 SSTGPEPPA---PTPLLAERHGG------SPQPLATTPLSQEPVNPPSEASPTRDRSPPK 407
Query: 247 ----IAFSSNNSVAKPIQKSAKAATEEASS-RSPK 276
+ SS++ + P + K + +SS SPK
Sbjct: 408 SPEKLPQSSSSESSPPSPQPTKVSRHASSSPESPK 442
Score = 52.0 bits (123), Expect = 6e-07
Identities = 70/222 (31%), Positives = 94/222 (42%), Gaps = 30/222 (13%)
Query: 10 PGSPQEKDSPSTSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRSRRR 69
P SP++ S+S S S ++ SR S S S + S R S S++R
Sbjct: 406 PKSPEKLPQSSSSESSPPSPQPTKV-SRHASSSPESPKPAPAPGSHREISSSPTSKNRS- 463
Query: 70 HQRKYRRYSRSYSRSRSRSRSR------RYRERRYGFTRRYY---RSPSRYRSRS----- 115
H R R S S++ SR RSR R R R T+R + RSP RSRS
Sbjct: 464 HGRAKRDKSHSHTPSRRMGRSRSPATAKRGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWG 523
Query: 116 RSRS---RSRGRSYCGRAYAIARGQRYYG------FGRTVYPEEHSRWRDRSRT-----R 161
RSRS R R RS ++ +R + G GR+ +R R RSRT R
Sbjct: 524 RSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRTPARRGR 583
Query: 162 SRSRTPFRLSEKDRMELLEIAKTNAAKALGTTNIDLPASLRT 203
SRSRTP R + R +++ G + PA R+
Sbjct: 584 SRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRS 625
Score = 48.9 bits (115), Expect = 5e-06
Identities = 88/296 (29%), Positives = 119/296 (40%), Gaps = 43/296 (14%)
Query: 18 SPSTSRSGGSSRLSSRSRSRSFSRSS-----RSHSRVS--SRFSSRSRRSK-SRSRSRRR 69
+P +R SR S +R RS SR+S RS SR S +R SRSR S +R RSR R
Sbjct: 1962 TPPVTRRRSRSRTSPITRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSR 2021
Query: 70 HQRKYRRYSRSY--------SRSRSRSRSRRYRERRYGFTRRYYRSPSRYRSRSRSRSRS 121
RR SRS SRSRS RR R T R RS +R R RS S
Sbjct: 2022 TPPAIRRRSRSRTPLLPRKRSRSRSPLAIRRRSRSRTPRTARGKRSLTRSPPAIRRRSAS 2081
Query: 122 RGRSYCGRAYAIARGQRYYGFGRTVYPEEHSRWRDRSRTRSRSRTPF-RLSEKDRMELLE 180
S R+ + + G SR SR S S TP R +E L
Sbjct: 2082 GSSSDRSRSATPPATRNHSGSRTPPVALNSSRMSCFSRP-SMSPTPLDRCRSPGMLEPLG 2140
Query: 181 IAKT--NAAKALGTTNIDLPASLRTVPSAKETSRGIGVSSNGAKPELSEKVT--EDGTRN 236
++T + + G + +D P +P + TS V N A+ ++ +T GT
Sbjct: 2141 SSRTPMSVLQQAGGSMMDGPGP--RIPDHQRTS----VPENHAQSRIALALTAISLGTAR 2194
Query: 237 PNEK---------------PTQQRSIAFSSNNSVAKPIQKSAKAATEEASSRSPKI 277
P P S+ + ++A I ++ AA AS+R+P I
Sbjct: 2195 PPPSMSAAGLAARMSQVPAPVPLMSLRTAPAANLASRIPAASAAAMNLASARTPAI 2250
Score = 47.8 bits (112), Expect = 1e-05
Identities = 51/170 (30%), Positives = 69/170 (40%), Gaps = 23/170 (13%)
Query: 11 GSPQEKDSPSTSRSGGSSRLSSRSRSRSFSRSSRSHSRV---------SSRFSSRSRRSK 61
G + + RS + RSRSRS R RSHSR SS ++SR S+
Sbjct: 679 GRSRSRTPARRGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQ 738
Query: 62 SRSRSRRRHQRKYRRYSRSYSRSRSRSRSRRYRERRYGFTRRYYRSPSRYRSRSRSRSRS 121
RSRS + K R S SRS S RS+ + R R S + +S++ R
Sbjct: 739 RRSRSNSSPEMKKSRISSRRSRSLSSPRSK--AKSRLSLRRSLSGSSPCPKQKSQTPPR- 795
Query: 122 RGRSYCGRAYAIARGQRYYGFGRTVYPEEHSRWRDRSRTRSRSRTPFRLS 171
R RS + A +R P SR + +S+TP R S
Sbjct: 796 RSRSGSSQPKAKSR-----------TPPRRSRSSSSPPPKQKSKTPSRQS 834
Score = 37.4 bits (85), Expect = 0.016
Identities = 78/314 (24%), Positives = 119/314 (37%), Gaps = 59/314 (18%)
Query: 12 SPQEKDSPS----------------TSRSGGSSRL----SSRSRSRSFSRSS-------- 43
+PQ + S S SRSG S L S+ + RS S SS
Sbjct: 1511 TPQRERSGSESSVDQKTVARTPLGQRSRSGSSQELDVKPSASPQERSESDSSPDSKAKTR 1570
Query: 44 -----RSHSRVSSRFSSRSRRSKSRSRSRRRHQRKYRRYSRSYSRSRSRSRSRRYRERRY 98
RS S S S+SR S RSRS + K + + R++S S E +
Sbjct: 1571 TPLRQRSRSGSSPEVDSKSRLSPRRSRSGSSPEVK----DKPRAAPRAQSGSDSSPEPKA 1626
Query: 99 GFTRRYYRSPSRYRSRSRSRSRSRGRSYCGRAYAIARGQ-----RYYGFGRTVYPEEHSR 153
R R RSRS S S+ RG S G + + + R G PE ++
Sbjct: 1627 PAPRALPR-----RSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARRGSRSSPEPKTK 1681
Query: 154 WRDRSRTRSRSRTPFRLSEKDRMELLEIAKTNAAKALGTTNIDLPASLRTVPSAK----- 208
R R RS SR+ L+ K R+ ++ +A + T P R PS
Sbjct: 1682 SRTPPRRRS-SRSSPELTRKARLS----RRSRSASSSPETRSRTPPRHRRSPSVSSPEPA 1736
Query: 209 ETSRGIGVSSNGAKPELSEKVTEDGTRNPNEKPTQQRSIAFSSNNSVAKPIQKSAKAATE 268
E SR + + P K T R+P+ KP + S + ++ ++ +
Sbjct: 1737 EKSRSSRRRRSASSPR--TKTTSRRGRSPSPKPRGLQRSRSRSRREKTRTTRRRDRSGSS 1794
Query: 269 EASSRSPKIDQKKS 282
+++SR + + +S
Sbjct: 1795 QSTSRRRQRSRSRS 1808
Score = 35.0 bits (79), Expect = 0.077
Identities = 32/88 (36%), Positives = 39/88 (44%), Gaps = 3/88 (3%)
Query: 10 PGSPQEKDSPSTSRSGGSSR-LSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRSRR 68
P SP+ K P RS + + S SRS S S R S + S R ++S S R R
Sbjct: 2662 PASPK-KPPPGERRSRSPRKPIDSLRDSRSLSYSPVERRRPSPQPSPRDQQSSSSERGSR 2720
Query: 69 RHQRKYRRYSRSYSRSRSRSRSRRYRER 96
R QR R S S+ R R R R R
Sbjct: 2721 RGQRGDSR-SPSHKRRRETPSPRPMRHR 2747
Score = 32.7 bits (73), Expect = 0.38
Identities = 63/265 (23%), Positives = 96/265 (36%), Gaps = 29/265 (10%)
Query: 16 KDSPSTSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRSRRRHQRKYR 75
K+ + S SS LS + ++ S++S +SS R+ SR RS + +
Sbjct: 1372 KEQSTRSSGHSSSELSPDAVEKAGMSSNQS---ISSPVLDAVPRTPSRERSSSASSPEMK 1428
Query: 76 RYSRSYSRSRSRSRSRRYRERRYGFTRRYYRSPSRYRSRSRSRSRSRGRSYCGRAYAIAR 135
RSRS S G R+ S S + R+ SRGRS C +
Sbjct: 1429 DGLPRTPSRRSRSGSSPGLRDGSGTPSRHSLSGSSPGMKDIPRTPSRGRSECDSS----- 1483
Query: 136 GQRYYGFGRTVYPEEHSRWRDRSRTRSRSRTPFRLSEKDRMELLEIAKTNAAKALGTTNI 195
+T P SR ++ TP R E+ E KT A LG
Sbjct: 1484 -PEPKALPQT--PRPRSRSPSSPELNNKCLTPQR--ERSGSESSVDQKTVARTPLGQR-- 1536
Query: 196 DLPASLRTVPSAKETSRGIGVSSNGAKPELSEKVTEDGTRNPNEKPTQQRSIAFSSNNSV 255
S +S+ + V + + E SE + ++ P +QRS + SS
Sbjct: 1537 ----------SRSGSSQELDVKPSASPQERSESDSSPDSKAKTRTPLRQRSRSGSS---- 1582
Query: 256 AKPIQKSAKAATEEASSRSPKIDQK 280
+ KS + S SP++ K
Sbjct: 1583 PEVDSKSRLSPRRSRSGSSPEVKDK 1607
Score = 31.2 bits (69), Expect = 1.1
Identities = 70/287 (24%), Positives = 113/287 (39%), Gaps = 32/287 (11%)
Query: 12 SPQEKDSPSTSRSGGS-SRLSSRSRSRSFSRSSRSHSRVSSRFSSRS--RRSKSRSRSRR 68
SP+ K S +SR S S S+++SR R S S S + S++ RRS+S S +
Sbjct: 746 SPEMKKSRISSRRSRSLSSPRSKAKSRLSLRRSLSGSSPCPKQKSQTPPRRSRSGSSQPK 805
Query: 69 RHQRKYRRYSRSYS----RSRSRSRSRRYRERRYGFTRRYYRSPSRYRSRSRSRSRSRGR 124
R R SRS S + +S++ SR+ + +P R S + ++ +
Sbjct: 806 AKSRTPPRRSRSSSSPPPKQKSKTPSRQSHSSSSPHPKVKSGTPPRQGSITSPQANEQS- 864
Query: 125 SYCGRAYAIARGQRYYGFGRTVYPEEHSRWRDR------SRTRSRSRTPFRLS-EKDRME 177
QR F + PE SR R S R +S TP R S +
Sbjct: 865 ---------VTPQRRSCFESSPDPELKSRTPSRHSCSGSSPPRVKSSTPPRQSPSRSSSP 915
Query: 178 LLEIAKTNAAKALGTTNIDLPASLR-TVPSAKETSRGIGVSSNGAKPELSEKVTEDGTRN 236
++ + + + P+ R T + SR + SN + L + + G+ +
Sbjct: 916 QPKVKAIISPRQRSHSGSSSPSPSRVTSRTTPRRSRSVSPCSN-VESRLLPRYSHSGSSS 974
Query: 237 PNEKPTQQRSIAFSSNNSVAKPIQKSAKAATEEASSRSPKIDQKKSP 283
P+ K + S + S++ P K KA T P + KSP
Sbjct: 975 PDTKVKPETPPRQSHSGSIS-PYPK-VKAQTPP----GPSLSGSKSP 1015
>gi|224548936 hypothetical protein LOC100170229 [Homo sapiens]
Length = 715
Score = 77.4 bits (189), Expect = 1e-14
Identities = 80/286 (27%), Positives = 134/286 (46%), Gaps = 22/286 (7%)
Query: 12 SPQEKDSPSTSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRSRRRHQ 71
S + + S +S SR RSRS S R+HSRV S S + S++RSR+R+
Sbjct: 268 SYNQASTRSRPQSHSQSRSPRRSRSGS---QKRTHSRVRSH-SWKRNHSRARSRTRKGIL 323
Query: 72 RKYRRYSRSYSRSRSRSRSRRYRERRYGFTRRYYRSPSRYRSRSRSRSRSRGRSYCGRAY 131
+ R+S+S S S+ +S+++ RR G + + R+PS+ RS S SRS S+ R + G +
Sbjct: 324 SQMGRHSQSRSHSKGKSQNQSRTPRR-GRSHNWSRNPSKERSHSHSRSSSKERDHRGSSS 382
Query: 132 AIARGQRYYGFGRTVYPEEHSRWR--DRSRTRSRSRTPFRLSEKDRMELLEIAK-----T 184
R G +HSR R +++R RSRSR+P++ ++ R A+
Sbjct: 383 PRKESGRSQS-GSPNKQRDHSRSRSPNKARDRSRSRSPYKARDRSRSRSPNKARDCSRSR 441
Query: 185 NAAKALGTTNIDLP------ASLRTVPSAKETSRGIGVSSNGAKPELSEKVTEDGTRNPN 238
+ KA + P + R+ A++ SR S +L E R +
Sbjct: 442 SPYKARDRSRSRSPNKARDHSRSRSPNKARDRSRSRSPSKERDHSQLGSPSKERDHRR-S 500
Query: 239 EKPTQQRSIAFSSNNSVAKPIQKSAKAATE--EASSRSPKIDQKKS 282
P+++R S ++S + ++S + E SRSP ++ +S
Sbjct: 501 RSPSKERQCRQSRSSSKERDHRRSRSPSKERQRRQSRSPNKERDRS 546
Score = 67.4 bits (163), Expect = 1e-11
Identities = 67/264 (25%), Positives = 108/264 (40%), Gaps = 8/264 (3%)
Query: 18 SPSTSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRSRRRHQRKYRRY 77
+PS RS SR SS+ R S S R S S S +R SRSRS + + + R
Sbjct: 358 NPSKERSHSHSRSSSKERDHRGSSSPRKESGRSQSGSPNKQRDHSRSRSPNKARDRSRSR 417
Query: 78 SRSYSRSRSRSRS-------RRYRERRYGFTRRYYRSPSRYRSRSRSRSRSRGRSYCGRA 130
S +R RSRSRS R R R RSP++ R SRSRS ++ R R+
Sbjct: 418 SPYKARDRSRSRSPNKARDCSRSRSPYKARDRSRSRSPNKARDHSRSRSPNKARDR-SRS 476
Query: 131 YAIARGQRYYGFGRTVYPEEHSRWRDRSRTRSRSRTPFRLSEKDRMELLEIAKTNAAKAL 190
+ ++ + + G +H R R S+ R ++ E+D +K +
Sbjct: 477 RSPSKERDHSQLGSPSKERDHRRSRSPSKERQCRQSRSSSKERDHRRSRSPSKERQRRQS 536
Query: 191 GTTNIDLPASLRTVPSAKETSRGIGVSSNGAKPELSEKVTEDGTRNPNEKPTQQRSIAFS 250
+ N + S PS + R S +++ R + +++R + S
Sbjct: 537 RSPNKERDRSQSRSPSEEREHRQSRSPSKERDRRRWRSPSKERERRQSRSSSEERDHSRS 596
Query: 251 SNNSVAKPIQKSAKAATEEASSRS 274
+ + + ++ E+A SRS
Sbjct: 597 RSPNKQSGYSRPRASSKEKAHSRS 620
Score = 66.6 bits (161), Expect = 2e-11
Identities = 78/290 (26%), Positives = 120/290 (41%), Gaps = 54/290 (18%)
Query: 11 GSPQEKDSPSTSRSGGSSRLSSRSRSRSFSRS-----SRSHSRVSS-----RFSSRSRRS 60
G + S S +S SR R RS ++SR+ S SHSR SS R SS R+
Sbjct: 327 GRHSQSRSHSKGKSQNQSRTPRRGRSHNWSRNPSKERSHSHSRSSSKERDHRGSSSPRKE 386
Query: 61 KSRSRSRRRHQRKYRRYSRS--YSRSRSRSRS-----RRYRERRYGFTRRYYRSPSRYRS 113
RS+S ++++ SRS +R RSRSRS R R R R RS S Y++
Sbjct: 387 SGRSQSGSPNKQRDHSRSRSPNKARDRSRSRSPYKARDRSRSRSPNKARDCSRSRSPYKA 446
Query: 114 RSRSRSRSRGRSYCGRAYAIARGQRYYGFGRTVYPEEHSRWRDRSRTRSRSRTPFRLSEK 173
R RSRSRS ++ +HSR R ++ R RSR+ E+
Sbjct: 447 RDRSRSRSPNKA-----------------------RDHSRSRSPNKARDRSRSRSPSKER 483
Query: 174 DRMELLEIAKTNAAKALGTTNIDLPASLRTVPSAKETSRGIGVSSNGAKPELSEKVTEDG 233
D + LG+ + + PS + R SS S +++
Sbjct: 484 DHSQ------------LGSPSKERDHRRSRSPSKERQCRQSRSSSKERDHRRSRSPSKER 531
Query: 234 TRNPNEKPTQQRSIAFSSNNSVAKPIQKSAKAATEEASS--RSPKIDQKK 281
R + P ++R + S + S + ++S + E RSP ++++
Sbjct: 532 QRRQSRSPNKERDRSQSRSPSEEREHRQSRSPSKERDRRRWRSPSKERER 581
Score = 57.0 bits (136), Expect = 2e-08
Identities = 76/283 (26%), Positives = 122/283 (43%), Gaps = 37/283 (13%)
Query: 15 EKDSPSTSRSGGS-SRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRSRRRHQRK 73
+ SPS+SR S ++ SR +S+S + S SRV S ++ S RS+ +S S+
Sbjct: 232 DNPSPSSSRKVKSYGQMIIPSREKSYSPTEMS-SRVKS-YNQASTRSRPQSHSQ------ 283
Query: 74 YRRYSRSYSRSRSRSRSRRY-RERRYGFTRRYYRSPSRYRS--------RSRSRSRSRGR 124
SRS RSRS S+ R + R R + + R + R+ SR R S+SRS S+G+
Sbjct: 284 ----SRSPRRSRSGSQKRTHSRVRSHSWKRNHSRARSRTRKGILSQMGRHSQSRSHSKGK 339
Query: 125 SYCGRAYAIARGQRYYGFGRTVYPEEHSRWRDRSRTRSRSRTPFRLSEKDRMELLEIAKT 184
S ++ RG+ H+ R+ S+ RS S + E+D K
Sbjct: 340 SQ-NQSRTPRRGR------------SHNWSRNPSKERSHSHSRSSSKERDHRGSSSPRKE 386
Query: 185 NAAKALGTTNIDLPASLRTVPS-AKETSRGIG-VSSNGAKPELSEKVTEDGTRNPNEKPT 242
+ G+ N S P+ A++ SR + S D +R+ +
Sbjct: 387 SGRSQSGSPNKQRDHSRSRSPNKARDRSRSRSPYKARDRSRSRSPNKARDCSRSRSPYKA 446
Query: 243 QQRSIAFSSNNSVAKPIQKSAKAATEEASSRSPKIDQKKSPYG 285
+ RS + S N + +S A + + SRSP ++ S G
Sbjct: 447 RDRSRSRSPNKARDHSRSRSPNKARDRSRSRSPSKERDHSQLG 489
Score = 53.5 bits (127), Expect = 2e-07
Identities = 76/279 (27%), Positives = 105/279 (37%), Gaps = 65/279 (23%)
Query: 11 GSP-QEKD-----SPSTSRSGGSSRLSSRSRSRSFSRS-SRSHSRVSSRFSSRSR-RSKS 62
GSP +E+D SPS R SR SS+ R SRS S+ R SR ++ R RS+S
Sbjct: 489 GSPSKERDHRRSRSPSKERQCRQSRSSSKERDHRRSRSPSKERQRRQSRSPNKERDRSQS 548
Query: 63 RSRSRRRHQRKYRRYSRSYSRSR----SRSRSRRYRERRYGFTRRYYRSPSRYRSRSRSR 118
RS S R R+ R S+ R R S+ R RR RS S R SRSR
Sbjct: 549 RSPSEEREHRQSRSPSKERDRRRWRSPSKERERRQS-----------RSSSEERDHSRSR 597
Query: 119 SRSRGRSYCGRAYAIARGQRYYGFGRTVYPEEHSRWRDRSRTRSRSRTPFRLSEKDRMEL 178
S ++ Y R + + SRSRTP
Sbjct: 598 SPNKQSGY-----------------------SRPRASSKEKAHSRSRTP----------- 623
Query: 179 LEIAKTNAAKALGTTNIDLPASLRTVPSAKETSRGIGVSSNGAKPELSEKVTEDGTRNPN 238
+K T++ + S TVP + + R +S+ LS+ T T + +
Sbjct: 624 ---SKEGNHSQSRTSSKESDPSQSTVPRSPDWKRSPTRTSS-----LSQNRTPSKTSSHS 675
Query: 239 EKPTQQRSIAFSSNNSVAKPIQKSAKAATEEASSRSPKI 277
S ++S A A E +SS S K+
Sbjct: 676 PSTFPSGGQTLSQDDSQADATTSKATLPGERSSSSSSKL 714
Score = 48.1 bits (113), Expect = 9e-06
Identities = 74/290 (25%), Positives = 117/290 (40%), Gaps = 41/290 (14%)
Query: 11 GSPQEKDSPSTSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSR----- 65
GS P S S++ ++ +RS ++ + S + V S SS+S +S S R
Sbjct: 18 GSSMPTADPKPPASLKSTKSATPNRSLVPTKPATSRNSVMSPSSSKSTKSTSTKRAPSNR 77
Query: 66 --SRRRHQRKYRRYSRSYSRSRSRSRSR----RYRERRYGFTRRYYRSPSRYRSRSRSRS 119
SR R + K R SR + +R+ S+ R +RR +R R+P R SRS RS
Sbjct: 78 PSSRSRVRSKARTPSRVSTDTRTSKASKASDVRCHQRRGTHSRG--RTPGRRGSRSSKRS 135
Query: 120 RSRG------RSYCGRAYAIARGQRYYGFGRTVYPEEHSRWRDRSRTRSRSRTPFRLSEK 173
SR R++ R +R + + + + R R +R RS S+ P LS+K
Sbjct: 136 PSRASTPGRIRTHGARPGMASRVRTPTSQQKGSRGKSYGRPRTSNRERSDSQ-PRNLSKK 194
Query: 174 DRMELLEIAKTNAAKALGTTNIDLPASLRTVPSAKETSRGIGV----SSNGAKPELSEKV 229
+ + G + I + L PS + G+ S+ P S KV
Sbjct: 195 ------------SYRPPGGSGIGRSSELAVTPSTAKCQTPTGIPSKEKSDNPSPSSSRKV 242
Query: 230 TEDG-----TRNPNEKPTQQRSIAFSSNNSVAKPIQKSAKAATEEASSRS 274
G +R + PT+ S S N + + +S + SRS
Sbjct: 243 KSYGQMIIPSREKSYSPTEMSSRVKSYNQASTRSRPQSHSQSRSPRRSRS 292
Score = 28.5 bits (62), Expect = 7.2
Identities = 21/82 (25%), Positives = 35/82 (42%), Gaps = 3/82 (3%)
Query: 205 PSAKETSRGIGVSSNGAKPELSEKVTEDGTRNPN---EKPTQQRSIAFSSNNSVAKPIQK 261
PS G + + KP S K T+ T N + KP R+ S ++S +
Sbjct: 10 PSMSLAPSGSSMPTADPKPPASLKSTKSATPNRSLVPTKPATSRNSVMSPSSSKSTKSTS 69
Query: 262 SAKAATEEASSRSPKIDQKKSP 283
+ +A + SSRS + ++P
Sbjct: 70 TKRAPSNRPSSRSRVRSKARTP 91
>gi|6631100 natural killer-tumor recognition sequence [Homo sapiens]
Length = 1462
Score = 77.0 bits (188), Expect = 2e-14
Identities = 66/160 (41%), Positives = 79/160 (49%), Gaps = 24/160 (15%)
Query: 16 KDSPSTSRSGGSSRLSSRSRSRSFSRS-SRSHSRVSSRFSSRSRRSKSRSRSR------- 67
+D S SRS SR S ++SR +RS S SHSR SR S+ S RS+S SRSR
Sbjct: 1305 RDDDSQSRSPSRSRSKSETKSRHRTRSVSYSHSRSRSRSSTSSYRSRSYSRSRSRGWYSR 1364
Query: 68 ---RRHQRKYRRYSRSYSRSRSRSRSRRY----RERRYGFTRRYYRSPSRYRSRSRSRSR 120
R YR Y + SRSRSRS Y R R Y + Y RS SR RS+ RS S
Sbjct: 1365 GRTRSRSSSYRSYKSHRTSSRSRSRSSSYDPHSRSRSYTYDSYYSRSRSRSRSQ-RSDSY 1423
Query: 121 SRGRSY------CGRAYAIARGQRYYGFGRTVYPEEHSRW 154
RGRSY C + + R Y R+ P E SR+
Sbjct: 1424 HRGRSYNRRSRSCRSYGSDSESDRSYSHHRS--PSESSRY 1461
Score = 62.0 bits (149), Expect = 6e-10
Identities = 66/165 (40%), Positives = 77/165 (46%), Gaps = 16/165 (9%)
Query: 19 PSTSRSGGSSRLSSR---SRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRSRRRHQRKYR 75
P S + SR S+SRS SRS RS S SR +RS S S SRSR R
Sbjct: 1291 PRNQESSSDEQTPSRDDDSQSRSPSRS-RSKSETKSRHRTRSV-SYSHSRSRSRSSTSSY 1348
Query: 76 RYSRSYSRSRSRSRSRRYRERRYGFTRRYYRSPSRYRSRSRSRS-----RSRGRSYCGRA 130
R SRSYSRSRSR R R R + R Y+S R SRSRSRS SR RSY +
Sbjct: 1349 R-SRSYSRSRSRGWYSRGRTRSRSSSYRSYKS-HRTSSRSRSRSSSYDPHSRSRSYTYDS 1406
Query: 131 YAIARGQRYYGFGRTVYPEEHSRWRDRSRTRSRSRTPFRLSEKDR 175
Y R R+ + + R R +R R+ SE DR
Sbjct: 1407 YYSRSRSR----SRSQRSDSYHRGRSYNRRSRSCRSYGSDSESDR 1447
Score = 61.6 bits (148), Expect = 8e-10
Identities = 46/138 (33%), Positives = 72/138 (52%), Gaps = 6/138 (4%)
Query: 27 SSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRSRRRHQRKYRRYSRSYSRSRS 86
++RL+ R R++ S ++ SR S RS+S+S ++ RH+ + YS S SRSRS
Sbjct: 1284 TARLNRRPRNQESSSDEQTPSRDDDSQSRSPSRSRSKSETKSRHRTRSVSYSHSRSRSRS 1343
Query: 87 RSRSRRYRERRYGFTRRYYRSPSRYRSRSRSRSRSRGRSYCGRAYAIARGQRYYGFGRT- 145
+ S R R +R +Y SR R+RSRS S +S+ + + +R Y R+
Sbjct: 1344 STSSYRSRSYSRSRSRGWY---SRGRTRSRSSSYRSYKSHRTSSRSRSRSSSYDPHSRSR 1400
Query: 146 --VYPEEHSRWRDRSRTR 161
Y +SR R RSR++
Sbjct: 1401 SYTYDSYYSRSRSRSRSQ 1418
Score = 54.7 bits (130), Expect = 9e-08
Identities = 46/139 (33%), Positives = 67/139 (48%), Gaps = 14/139 (10%)
Query: 29 RLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRSRRRHQRKYRRYSRSYSRSRSRS 88
R+ +S+++ S R ++R + R R +S S + R SRS SRSRS+S
Sbjct: 1263 RIEIKSKNKVRPGSLFDEVRKTARLNRRPRNQESSS-DEQTPSRDDDSQSRSPSRSRSKS 1321
Query: 89 RSR-RYRERRYGFTRRYYRSPSRYRSRSRSRSRSRGRSYCGRAYAIARGQRYYGFGRTVY 147
++ R+R R + S SRSRSRS SY R+Y+ +R + +Y GRT
Sbjct: 1322 ETKSRHRTRSVSY------------SHSRSRSRSSTSSYRSRSYSRSRSRGWYSRGRTRS 1369
Query: 148 PEEHSRWRDRSRTRSRSRT 166
R RT SRSR+
Sbjct: 1370 RSSSYRSYKSHRTSSRSRS 1388
Score = 51.6 bits (122), Expect = 8e-07
Identities = 79/297 (26%), Positives = 121/297 (40%), Gaps = 46/297 (15%)
Query: 20 STSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRSRRRHQRKYRRYSR 79
ST S S ++S S S++S RS S RSRSR R Y SR
Sbjct: 648 STYSLANIKETGSSSSYHKREKNSESDQSTYSKYSDRSSESSPRSRSRSSRSRSY---SR 704
Query: 80 SYSRSR------SRSR---SRRYRERRYGFTRRYYRSPSRYRSRSRS---RSRSRGRSYC 127
SY+RSR SRSR SR + +Y + RS S Y S S R++ R RS
Sbjct: 705 SYTRSRSLASSHSRSRSPSSRSHSRNKYSDHSQCSRS-SSYTSISSDDGRRAKRRLRS-S 762
Query: 128 GRAYAIARGQRYYGFGRTVYPEEHSRWRDRS---RTRSRSRTPFRLS------------- 171
G+ +++ + +T++ ++ + RDRS R S SR+ S
Sbjct: 763 GKKNSVSHKKHSSSSEKTLH-SKYVKGRDRSSCVRKYSESRSSLDYSSDSEQSSVQATQS 821
Query: 172 --EKDRMELLEIAKTNAAKALGTTNIDLPASLRTVPSAKETSRGIGVSS---NGAKPELS 226
EK++ +E K G + S R P +K+ + +S NG+KP
Sbjct: 822 AQEKEKQGQMERTHNKQEKNRGE---EKSKSERECPHSKKRTLKENLSDHLRNGSKP--- 875
Query: 227 EKVTEDGTRNPNEKPTQQRSIAFSSNNSVAKPIQKSAKAATEEASSRSPKIDQKKSP 283
++ G++ +E +R + +S N K AT ++ S +I K P
Sbjct: 876 KRKNYAGSKWDSES-NSERDVTKNSKNDSHPSSDKEEGEATSDSESEVSEIHIKVKP 931
Score = 48.9 bits (115), Expect = 5e-06
Identities = 38/100 (38%), Positives = 51/100 (51%), Gaps = 3/100 (3%)
Query: 16 KDSPSTSRSGGSSRLSSR-SRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRSRRRHQRKY 74
K S RS SS LSS S R +S+S + + S S RSKS S+S R +
Sbjct: 476 KSSCDRERSSRSSSLSSHHSSKRDWSKSDKDVQSSLTHSSRDSYRSKSHSQSYSRGSSRS 535
Query: 75 RRYSRSYSRSRSRSRSRRYRERRYGFTRRYYRSPSRYRSR 114
R S+S S SRSRS+SR + G +R +SP + S+
Sbjct: 536 RTASKSSSHSRSRSKSR--SSSKSGHRKRASKSPRKTASQ 573
Score = 44.3 bits (103), Expect = 1e-04
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
Query: 9 WPGSPQEKDSPSTSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSR-RSKSRSRSR 67
W S ++ S T S S R S+S S+S+SR S S SR +S+ SS SR RSKSRS S+
Sbjct: 500 WSKSDKDVQSSLTHSSRDSYR--SKSHSQSYSRGS-SRSRTASKSSSHSRSRSKSRSSSK 556
Query: 68 RRHQRKYRRYSRSYSRSRSRSR 89
H+++ + R + S ++
Sbjct: 557 SGHRKRASKSPRKTASQLSENK 578
Score = 40.8 bits (94), Expect = 0.001
Identities = 43/122 (35%), Positives = 56/122 (45%), Gaps = 17/122 (13%)
Query: 19 PSTSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRS--RSRRRHQRKYRR 76
PS S SS +S S RSSRS S +SS SS+ SKS +S H +
Sbjct: 462 PSDIESSKSSTRRMKS-SCDRERSSRSSS-LSSHHSSKRDWSKSDKDVQSSLTHSSRDSY 519
Query: 77 YSRSYSRSRSRSRSRRYRERRYGFTRRYYRSPSRYRSRSRSRSRSRGRSYCGRAYAIARG 136
S+S+S+S SR SR R+ S+ S SRSRS+SR S G ++
Sbjct: 520 RSKSHSQSYSRGSSRS-------------RTASKSSSHSRSRSKSRSSSKSGHRKRASKS 566
Query: 137 QR 138
R
Sbjct: 567 PR 568
Score = 38.9 bits (89), Expect = 0.005
Identities = 51/208 (24%), Positives = 82/208 (39%), Gaps = 41/208 (19%)
Query: 12 SPQEKDSPSTSRSGGSSRLSSRSRSRSFSR--SSRSHSRVSSRFSSRSRRSKSRSRSRRR 69
S +K S S LS RSRS S++ S S +R S R + K + + + +
Sbjct: 384 SKGDKLSDPCSSRWDERSLSQRSRSWSYNGYYSDLSTARHSGHHKKRRKEKKVKHKKKGK 443
Query: 70 HQRKYRRYSRSYSR---------------------------SRSRSRSRRYRERR-YGFT 101
Q+ RR+ ++ R SRS S S + +R + +
Sbjct: 444 KQKHCRRHKQTKKRRILIPSDIESSKSSTRRMKSSCDRERSSRSSSLSSHHSSKRDWSKS 503
Query: 102 RRYYRSPSRYRSRSRSRSRSRGRSYCGRAYAIARGQRYYGFGRTV-YPEEHSRWRDRSRT 160
+ +S + SR RS+S +SY +RG RT HSR R +SR+
Sbjct: 504 DKDVQSSLTHSSRDSYRSKSHSQSY-------SRGS---SRSRTASKSSSHSRSRSKSRS 553
Query: 161 RSRSRTPFRLSEKDRMELLEIAKTNAAK 188
S+S R S+ R ++++ K
Sbjct: 554 SSKSGHRKRASKSPRKTASQLSENKPVK 581
Score = 30.0 bits (66), Expect = 2.5
Identities = 21/95 (22%), Positives = 37/95 (38%)
Query: 41 RSSRSHSRVSSRFSSRSRRSKSRSRSRRRHQRKYRRYSRSYSRSRSRSRSRRYRERRYGF 100
R +HS S S+ S S+S S S H+R RR + + + + R+
Sbjct: 189 RKKPTHSEGSDSSSNSSSSSESSSESELEHERSRRRKHKRRPKVKRSKKRRKEASSSEEP 248
Query: 101 TRRYYRSPSRYRSRSRSRSRSRGRSYCGRAYAIAR 135
++ +P + RS + + S R + R
Sbjct: 249 RNKHAMNPKGHSERSDTNEKRSVDSSAKREKPVVR 283
Score = 28.9 bits (63), Expect = 5.5
Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Query: 14 QEKDSPSTSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSK-SRSRSRRR 69
++K T G S +S S S S S S H R SR RR K RS+ RR+
Sbjct: 186 EKKRKKPTHSEGSDSSSNSSSSSESSSESELEHER--SRRRKHKRRPKVKRSKKRRK 240
>gi|38146113 arginine/serine-rich coiled-coil 2 isoform b [Homo
sapiens]
Length = 375
Score = 76.6 bits (187), Expect = 2e-14
Identities = 60/156 (38%), Positives = 81/156 (51%), Gaps = 7/156 (4%)
Query: 29 RLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRSRRRHQRKYRRYSRSYSRSRSRS 88
R S+ +S +S + + S R R + S + RH+RK R+ SR S SRSRS
Sbjct: 13 RHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSEN-GEDRHKRKERKSSRGRSHSRSRS 71
Query: 89 RSRRYRERRYGFTRRYYRSPSRYRSRSRSRSRSRGRSYCGRAYAIARGQRYYGFGRTVYP 148
R RR+R R R+ RS SR R +SRSRSR R +S R+ + R +R R+
Sbjct: 72 RERRHRSR--SRERKKSRSRSRERKKSRSRSRERKKS---RSRSRERKRRIRSRSRSRSR 126
Query: 149 EEHSRWRDRSRTRSRSRTPFRLSEKDRMELLEIAKT 184
H R R RSRTRSRSR + EK R +++T
Sbjct: 127 HRH-RTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRT 161
Score = 73.6 bits (179), Expect = 2e-13
Identities = 64/169 (37%), Positives = 80/169 (47%), Gaps = 35/169 (20%)
Query: 6 NDMWPGSPQEKDSPSTSRSGGS-----SRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRS 60
ND S + ++ ++S +G R SSR RS S SRS R SR R
Sbjct: 30 NDKEHSSDKGRERLNSSENGEDRHKRKERKSSRGRSHSRSRSRERRHRSRSR-----ERK 84
Query: 61 KSRSRSRRRHQRKYRRYSRSYSRSRSRSRSRRYRERRYGFTRRYYRSPSRYRSRSRSRSR 120
KSRSRSR R + + R R SRSRSR R RR R R RS SR+R R+RSRSR
Sbjct: 85 KSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRS--------RSRSRHRHRTRSRSR 136
Query: 121 SRGRSYCGRAYAIARGQRYYGFGRTVYPEEHSRWRDRSRTRSRSRTPFR 169
+R RS R I + +R+ RS +R+ S PFR
Sbjct: 137 TRSRSR-DRKKRIEKPRRF----------------SRSLSRTPSPPPFR 168
Score = 65.1 bits (157), Expect = 7e-11
Identities = 44/96 (45%), Positives = 56/96 (58%), Gaps = 2/96 (2%)
Query: 22 SRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRSRRRHQRKYRRYSRSY 81
SRS + SRSR R SR SRS R SR SR R+ + RSRSR R + ++R SRS
Sbjct: 78 SRSRERKKSRSRSRERKKSR-SRSRERKKSRSRSRERKRRIRSRSRSRSRHRHRTRSRSR 136
Query: 82 SRSRSRSRSRRYRERRYGFTRRYYRSPSRYRSRSRS 117
+RSRSR R +R + R F+R R+PS R R+
Sbjct: 137 TRSRSRDRKKRIEKPR-RFSRSLSRTPSPPPFRGRN 171
Score = 32.3 bits (72), Expect = 0.50
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 18 SPSTSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRSRRRHQRKYRRY 77
S S SRS R SRSR+RS SR + RFS RS SR+ S + +
Sbjct: 119 SRSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFS----RSLSRTPSPPPFRGRNTAM 174
Query: 78 SRSYSRSRSRSRSRRYRERR 97
+ +R R+++ +E+R
Sbjct: 175 DAQEALARRLERAKKLQEQR 194
>gi|116089325 splicing factor, arginine/serine-rich 12 isoform a
[Homo sapiens]
Length = 624
Score = 75.5 bits (184), Expect = 5e-14
Identities = 70/270 (25%), Positives = 113/270 (41%), Gaps = 13/270 (4%)
Query: 14 QEKDSPSTSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSR-RSKSRSRSRRRHQR 72
+ + S R GG SR +RS+SRS S+S R S+ SRS RS+SR + RRR +
Sbjct: 294 EPESGKSNERKGGRSRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKS 353
Query: 73 KYRRYSRSYSRSRSRSRSRRYRERRYGFTRRYYRSPSRYRSRSRSRSRSRGRSYCGRAYA 132
+++ RS SR R +SRSR + + TR + R + + R + R R + R
Sbjct: 354 PHKK--RSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKE---REKE 408
Query: 133 IARGQRYYGFGRTVYPEEHSRWRDRSRTRSRSRTPFRLSEKDRMELLEIAKTNAAKALGT 192
RG+ E + +DR R R + R EK++ + E +
Sbjct: 409 KERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEID 468
Query: 193 TNIDLPASLRTVPSAKETSRGIGVSSNGAKPELSEKVTEDGTRNPNEKPTQQRSIAFSSN 252
RT P + SR S + E + + +R+P T +R SS
Sbjct: 469 EKRKKDKKSRTPPRSYNASR----RSRSSSRERRRRRSRSSSRSPRTSKTIKRK---SSR 521
Query: 253 NSVAKPIQKSAKAATEEASSRSPKIDQKKS 282
+ + K K +E S + ++++S
Sbjct: 522 SPSPRSRNKKDKKREKERDHISERRERERS 551
Score = 39.3 bits (90), Expect = 0.004
Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Query: 13 PQEKDSPSTSRSGGSSRLSSRSRSRSFS-RSSRSHSRVSSRF-SSRSRRSKSRSRSRRRH 70
P+ ++ SRS R RSRS S S R+S++ R SSR S RSR K + R + R
Sbjct: 481 PRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERD 540
Query: 71 QRKYRRYSRSYSRSRSRSRSRRYRER 96
RR + R S R +E+
Sbjct: 541 HISERRERERSTSMRKSSNDRDGKEK 566
>gi|21040255 splicing factor, arginine/serine-rich 12 isoform b
[Homo sapiens]
Length = 508
Score = 75.5 bits (184), Expect = 5e-14
Identities = 70/270 (25%), Positives = 113/270 (41%), Gaps = 13/270 (4%)
Query: 14 QEKDSPSTSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSR-RSKSRSRSRRRHQR 72
+ + S R GG SR +RS+SRS S+S R S+ SRS RS+SR + RRR +
Sbjct: 178 EPESGKSNERKGGRSRSHTRSKSRSSSKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKS 237
Query: 73 KYRRYSRSYSRSRSRSRSRRYRERRYGFTRRYYRSPSRYRSRSRSRSRSRGRSYCGRAYA 132
+++ RS SR R +SRSR + + TR + R + + R + R R + R
Sbjct: 238 PHKK--RSKSRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKE---REKE 292
Query: 133 IARGQRYYGFGRTVYPEEHSRWRDRSRTRSRSRTPFRLSEKDRMELLEIAKTNAAKALGT 192
RG+ E + +DR R R + R EK++ + E +
Sbjct: 293 KERGKNKDRDKEREKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEID 352
Query: 193 TNIDLPASLRTVPSAKETSRGIGVSSNGAKPELSEKVTEDGTRNPNEKPTQQRSIAFSSN 252
RT P + SR S + E + + +R+P T +R SS
Sbjct: 353 EKRKKDKKSRTPPRSYNASR----RSRSSSRERRRRRSRSSSRSPRTSKTIKRK---SSR 405
Query: 253 NSVAKPIQKSAKAATEEASSRSPKIDQKKS 282
+ + K K +E S + ++++S
Sbjct: 406 SPSPRSRNKKDKKREKERDHISERRERERS 435
Score = 39.3 bits (90), Expect = 0.004
Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Query: 13 PQEKDSPSTSRSGGSSRLSSRSRSRSFS-RSSRSHSRVSSRF-SSRSRRSKSRSRSRRRH 70
P+ ++ SRS R RSRS S S R+S++ R SSR S RSR K + R + R
Sbjct: 365 PRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERD 424
Query: 71 QRKYRRYSRSYSRSRSRSRSRRYRER 96
RR + R S R +E+
Sbjct: 425 HISERRERERSTSMRKSSNDRDGKEK 450
>gi|42560244 peptidylprolyl isomerase G [Homo sapiens]
Length = 754
Score = 72.8 bits (177), Expect = 3e-13
Identities = 72/273 (26%), Positives = 120/273 (43%), Gaps = 29/273 (10%)
Query: 16 KDSPSTSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRSRRRHQRKYR 75
K+ S S G + SRS+ +S S+S+ S+ + RR++SRSR + K+
Sbjct: 498 KEKEKQSDSKGKDQERSRSKEKSKQLESKSNEHDHSKSKEKDRRAQSRSRECDITKGKHS 557
Query: 76 RYSRSYSRSRSRSRSRRYRERRY----GFTRRYYR-SPSRYRSRSRSRSRSRGRSYCGRA 130
SR+ RSRSR RSRR R R + ++ Y+R YR R RSRSR R R+ GR+
Sbjct: 558 YNSRTRERSRSRDRSRRVRSRTHDRDRSRSKEYHRYREQEYRRRGRSRSRER-RTPPGRS 616
Query: 131 YAIARGQRYYGFGRTVYPEEHSRWRDRSRTRSRSRTPFRLSEKDRMELLEIAKTNAAKAL 190
+ R +R SR +R ++SR++ +R E E +++
Sbjct: 617 RSKDRRRR----------RRDSRSSEREESQSRNKDKYRNQESKSSHRKENSESEKRMYS 666
Query: 191 GTTNIDLPASLRTVPSAKETSRGIGVSSNGAKPELSEKVTEDGTRNPNEKPTQQRSIAFS 250
+ + + + R + ++ S + + EL + + N++ + RS
Sbjct: 667 KSRDHNSSNNSREKKADRDQSPFSKIKQSSQDNELKSSMLK------NKEDEKIRS---- 716
Query: 251 SNNSVAKPIQKSAKAATEEASSRSPKIDQKKSP 283
SV K QKS + ++ K D + SP
Sbjct: 717 ---SVEKENQKSKGQENDHVHEKNKKFDHESSP 746
Score = 58.9 bits (141), Expect = 5e-09
Identities = 72/290 (24%), Positives = 115/290 (39%), Gaps = 32/290 (11%)
Query: 12 SPQEKDSPSTSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSR-RSKSRSRSRRR- 69
SP K+ S R R+ + + ++V R S+SR +SK +S+S+ R
Sbjct: 415 SPNRKNEKEKKVKDHKSNSKERDIRRNSEKDDKYKNKVKKRAKSKSRSKSKEKSKSKERD 474
Query: 70 --HQRKYRRYSRSYSRSR-----------SRSRSRRYRERRYGFTRRYYRSPSRYRSRSR 116
H R + RS S+ R S S+ + R + S S S+
Sbjct: 475 SKHNRNEEKRMRSRSKGRDHENVKEKEKQSDSKGKDQERSRSKEKSKQLESKSNEHDHSK 534
Query: 117 SRSRSRGRSYCGRAYAIARGQRYYGFGRTVYPEEHSRWRDRSRTRSRSRTPFRLSEKDRM 176
S+ + R R I +G+ Y RT E SR RDRSR R RSRT R ++ R
Sbjct: 535 SKEKDRRAQSRSRECDITKGKHSYN-SRT---RERSRSRDRSR-RVRSRTHDR--DRSRS 587
Query: 177 ELLEIAKTNAAKALGTTNIDLPASLRTVP--SAKETSRGIGVSSNGAKPELSEKVTEDGT 234
+ + + G + RT P S + R S ++ E S+ +D
Sbjct: 588 KEYHRYREQEYRRRGRSR---SRERRTPPGRSRSKDRRRRRRDSRSSEREESQSRNKDKY 644
Query: 235 RNPNEKPTQQRSIAFSSNNSVAKPIQKSAKAATEEASSRSPKIDQKKSPY 284
RN K + ++ N+ K + ++ +SR K D+ +SP+
Sbjct: 645 RNQESKSSHRK-----ENSESEKRMYSKSRDHNSSNNSREKKADRDQSPF 689
Score = 48.1 bits (113), Expect = 9e-06
Identities = 68/306 (22%), Positives = 113/306 (36%), Gaps = 37/306 (12%)
Query: 7 DMWPGSPQEKDSPSTSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRS 66
++ P S +K+ +S SS SS S S S+S S S S+ +SK R +
Sbjct: 176 ELIPKSKVKKEEKKRHKSSSSS--SSSSSDSDSSSDSQSSSDSSDSESATEEKSKKRKKK 233
Query: 67 RRRHQRKYRRYSRSYSRSRSRSRSRRYRERRYGFTRRYYR----------------SPSR 110
R++ RK+++ + +S+ + S E + R SP +
Sbjct: 234 HRKNSRKHKKEKKKRKKSKKSASSESEAENLEAQPQSTVRPEEIPPIPENRFLMRKSPPK 293
Query: 111 -----YRSRSRSRSR------SRGRSYCGRAYAIARGQRYYGFGRTVYPEEHSRWRDRSR 159
++R R R R S+ SY R G++ G G Y SR R R R
Sbjct: 294 ADEKERKNRERERERECNPPNSQPASYQRRLLVTRSGRKIKGRGPRRY-RTPSRSRSRDR 352
Query: 160 TRSRSRTPFRLSEKDRMELLEIAKTNA-AKALGTTNIDLPASLRTVPSAKETS----RGI 214
R P E R + + ++ K + ++ + R+ KE R +
Sbjct: 353 FRRSETPPHWRQEMQRAQRMRVSSGERWIKGDKSELNEIKENQRSPVRVKERKITDHRNV 412
Query: 215 GVSSNGAKPELSEKVTEDGTRNPNEKPTQQRSIAFSSNNSVAKPIQKSAKAATEEASSRS 274
S N + EK +D N E+ ++ S + K KS + + S+S
Sbjct: 413 SESPN--RKNEKEKKVKDHKSNSKERDIRRNSEKDDKYKNKVKKRAKSKSRSKSKEKSKS 470
Query: 275 PKIDQK 280
+ D K
Sbjct: 471 KERDSK 476
>gi|4759100 splicing factor, arginine/serine-rich 11 [Homo sapiens]
Length = 484
Score = 68.9 bits (167), Expect = 5e-12
Identities = 55/156 (35%), Positives = 73/156 (46%), Gaps = 6/156 (3%)
Query: 10 PGSPQEKDSPSTSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRSRRR 69
P +EK S SRS R R+ S S R SRS SR S SRSRR R RR
Sbjct: 239 PDKKEEKRRHSRSRSRSRRR---RTPSSSRHRRSRSRSRRRSHSKSRSRRRSKSPRRRRS 295
Query: 70 HQRKYRRYSRSYSRSRSRSRSRRYRERRYGFTRRYYRSPSRYRSRSRSRSRSRGRSYCGR 129
H R+ R SRS S++R + + + ++R + Y S +R RSRS SR R R RS G
Sbjct: 296 HSRERGRRSRSTSKTRDKKKEDKEKKRSKTPPKSY--STAR-RSRSASRERRRRRSRSGT 352
Query: 130 AYAIARGQRYYGFGRTVYPEEHSRWRDRSRTRSRSR 165
R+ P H + + + + + RSR
Sbjct: 353 RSPKKPRSPKRKLSRSPSPRRHKKEKKKDKDKERSR 388
Score = 59.7 bits (143), Expect = 3e-09
Identities = 68/259 (26%), Positives = 107/259 (41%), Gaps = 14/259 (5%)
Query: 18 SPSTSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRSRRRHQRKYRRY 77
SPS S + + ++S S + + + R S+SRSRSRRR R+
Sbjct: 207 SPSLKSDTSSKEIEEAMKRVREAQSLISAAIEPDKKEEKRRHSRSRSRSRRRRTPSSSRH 266
Query: 78 SRSYSRSRSRSRSRRYRERRYGFTRRYYRSPSRYRSRSRSRSRSRGRSYCGRAYAIARGQ 137
RS SRSR RS S+ R RR + R RS SR R R RSRS S+ R + +
Sbjct: 267 RRSRSRSRRRSHSKS-RSRRRSKSPRRRRSHSRERGR-RSRSTSKTRD---KKKEDKEKK 321
Query: 138 RYYGFGRTVYPEEHSRWRDRSRTRSRSRTPFRLSEKDRMELLEIAKTNAAKALGTTNIDL 197
R ++ SR R R R RSR+ R +K R +++++ + +
Sbjct: 322 RSKTPPKSYSTARRSRSASRERRRRRSRSGTRSPKKPRSPKRKLSRSPSPRR-------- 373
Query: 198 PASLRTVPSAKETSRGIGVSSNGAKPELSEKVTEDGTRNPNEKPTQQRSIAFSSNNSVAK 257
+ KE SR S K + +K + ++ ++K +Q + +
Sbjct: 374 HKKEKKKDKDKERSRDERERSTSKKKKSKDKEKDRERKSESDKDVKQVTRDYDEEEQ-GY 432
Query: 258 PIQKSAKAATEEASSRSPK 276
+K K + + SPK
Sbjct: 433 DSEKEKKEEKKPIETGSPK 451
Score = 44.7 bits (104), Expect = 1e-04
Identities = 60/242 (24%), Positives = 92/242 (38%), Gaps = 51/242 (21%)
Query: 40 SRSSRSHSRVSSRFSSRSRRSKSRSRSRRRHQRKYRRYSRSYSRSRSRSRSRRYRERRYG 99
S S + S+ R R ++S + +K + R +SRSRSRSR RR
Sbjct: 209 SLKSDTSSKEIEEAMKRVREAQSLISAAIEPDKKEEK--RRHSRSRSRSRRRR------- 259
Query: 100 FTRRYYRSPSRYRSRSRSRSRSRGRSYCGRAYAIARGQRYYGFGRTVYPEEHSRWRDRSR 159
+PS R R RSRSRSR RS+ +SR
Sbjct: 260 -------TPSSSRHR-RSRSRSRRRSH-----------------------------SKSR 282
Query: 160 TRSRSRTPFRLSEKDRMELLEIAKTNAAKALGTTNIDLPASLRTVPSAKETSRGIGVSSN 219
+R RS++P R R T+ + + + S +T P + T+R S
Sbjct: 283 SRRRSKSPRRRRSHSRERGRRSRSTSKTRDKKKEDKEKKRS-KTPPKSYSTAR----RSR 337
Query: 220 GAKPELSEKVTEDGTRNPNEKPTQQRSIAFSSNNSVAKPIQKSAKAATEEASSRSPKIDQ 279
A E + + GTR+P + + +R ++ S + K +K K R +
Sbjct: 338 SASRERRRRRSRSGTRSPKKPRSPKRKLSRSPSPRRHKKEKKKDKDKERSRDERERSTSK 397
Query: 280 KK 281
KK
Sbjct: 398 KK 399
Score = 42.4 bits (98), Expect = 5e-04
Identities = 35/141 (24%), Positives = 58/141 (41%), Gaps = 25/141 (17%)
Query: 12 SPQEKDSPSTSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRSRRRHQ 71
SP+ + S S R G SR +S++R + + S+ + S +RRS+S SR RRR +
Sbjct: 289 SPRRRRSHSRER-GRRSRSTSKTRDKKKEDKEKKRSKTPPKSYSTARRSRSASRERRRRR 347
Query: 72 RKY---------------------RRYSRSYSRSRSRSRSRRYRERRYGFTRRYYRSPSR 110
+ RR+ + + + + RSR RER T + +S +
Sbjct: 348 SRSGTRSPKKPRSPKRKLSRSPSPRRHKKEKKKDKDKERSRDERERS---TSKKKKSKDK 404
Query: 111 YRSRSRSRSRSRGRSYCGRAY 131
+ R R + R Y
Sbjct: 405 EKDRERKSESDKDVKQVTRDY 425
>gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens]
Length = 330
Score = 68.6 bits (166), Expect = 6e-12
Identities = 56/121 (46%), Positives = 61/121 (50%), Gaps = 9/121 (7%)
Query: 14 QEKDSPSTSRSGGSSRLSSRSRSRSFSRSS---RSHSRVSSRFSSRSRRSKSRSRSRRR- 69
+ + S S S S SS SSRSRSRS SRSS +S SR SSR SRSR SKSRS SR
Sbjct: 205 KSRSSHSRSSSRSSSPSSSRSRSRSRSRSSSSSQSRSRSSSRERSRSRGSKSRSSSRSHR 264
Query: 70 -----HQRKYRRYSRSYSRSRSRSRSRRYRERRYGFTRRYYRSPSRYRSRSRSRSRSRGR 124
+R Y S S R+R RSRSR R RSP R S S S R
Sbjct: 265 GSSSPRKRSYSSSSSSPERNRKRSRSRSSSSGDRKKRRTRSRSPERRHRSSSGSSHSGSR 324
Query: 125 S 125
S
Sbjct: 325 S 325
Score = 64.7 bits (156), Expect = 9e-11
Identities = 60/150 (40%), Positives = 73/150 (48%), Gaps = 29/150 (19%)
Query: 22 SRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRSRRRHQRKYRRYSRSY 81
S S++ S RSRS SRSS HSR SSR SS S SRSRSR R + SRS
Sbjct: 188 SEEEDSNKKKSNRRSRSKSRSS--HSRSSSRSSSPS---SSRSRSRSRSRSSSSSQSRSR 242
Query: 82 SRSRSRSRSRRYRERRYGFTRRYYRSPSR--YRSRSRSRSRSRGRSYCGRAYAIARGQRY 139
S SR RSRSR + R + R SP + Y S S S R+R RS R+ + + G
Sbjct: 243 SSSRERSRSRGSKSRSSSRSHRGSSSPRKRSYSSSSSSPERNRKRS---RSRSSSSG--- 296
Query: 140 YGFGRTVYPEEHSRWRDRSRTRSRSRTPFR 169
DR + R+RSR+P R
Sbjct: 297 ----------------DRKKRRTRSRSPER 310
Score = 64.3 bits (155), Expect = 1e-10
Identities = 53/113 (46%), Positives = 60/113 (53%), Gaps = 13/113 (11%)
Query: 20 STSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRSRRRHQRKYRRYSR 79
S + + RSRS+S S SRS SR SS SSRSR S+SRSRS Q + R SR
Sbjct: 188 SEEEDSNKKKSNRRSRSKSRSSHSRSSSRSSSPSSSRSR-SRSRSRSSSSSQSRSRSSSR 246
Query: 80 SYSRSR-----SRSRSRR----YRERRYGFTRRYYRSPSRYRSRSRSRSRSRG 123
SRSR S SRS R R+R Y + SP R R RSRSRS S G
Sbjct: 247 ERSRSRGSKSRSSSRSHRGSSSPRKRSYSSSS---SSPERNRKRSRSRSSSSG 296
Score = 49.7 bits (117), Expect = 3e-06
Identities = 44/111 (39%), Positives = 49/111 (44%), Gaps = 9/111 (8%)
Query: 12 SPQEKDSPSTSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRSRRRHQ 71
S S S SRS SSR SRSR SSRSH R SS RS S S S R R
Sbjct: 229 SRSRSSSSSQSRSRSSSRERSRSRGSKSRSSSRSH-RGSSSPRKRSYSSSSSSPERNR-- 285
Query: 72 RKYRRYSRSYSRSRSRSRSRRYRERRYGFTRRYYRSPSRYRSRSRSRSRSR 122
RS SRS S ++ R R RR+ S S SRS S+ +
Sbjct: 286 ------KRSRSRSSSSGDRKKRRTRSRSPERRHRSSSGSSHSGSRSSSKKK 330
Score = 33.5 bits (75), Expect = 0.22
Identities = 27/81 (33%), Positives = 32/81 (39%), Gaps = 15/81 (18%)
Query: 11 GSPQEKDSPSTSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRSRRRH 70
GS + +S S R RSRSRS S R R SR R RS S S
Sbjct: 265 GSSSPRKRSYSSSSSSPERNRKRSRSRSSSSGDRKKRRTRSRSPERRHRSSSGS------ 318
Query: 71 QRKYRRYSRSYSRSRSRSRSR 91
S+S SRS S+ +
Sbjct: 319 ---------SHSGSRSSSKKK 330
>gi|119226260 calcium homeostasis endoplasmic reticulum protein
[Homo sapiens]
Length = 916
Score = 68.6 bits (166), Expect = 6e-12
Identities = 55/98 (56%), Positives = 59/98 (60%), Gaps = 7/98 (7%)
Query: 23 RSGGSSRLSSRSRSRSFSRS-SRSHSRVSSRFSSRSRRSKSRSRSRRRHQRKYRRYSRSY 81
R G R S SRSRS S+S RS SR +SR SS+S S SRSRSR R YSRS
Sbjct: 726 RKGQEKRNSGPSRSRSRSKSRGRSSSRSNSR-SSKSSGSYSRSRSRSCS----RSYSRSR 780
Query: 82 SRSRSRSRSRRYRERRYGFTRRYYRSPSRYRSRSRSRS 119
SRSRSRSRS R R R +R SP R R RSRSRS
Sbjct: 781 SRSRSRSRSSRSRSRSQSRSRSKSYSPGR-RRRSRSRS 817
Score = 65.9 bits (159), Expect = 4e-11
Identities = 48/115 (41%), Positives = 60/115 (52%), Gaps = 4/115 (3%)
Query: 12 SPQEKDSPSTSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRSRRRHQ 71
SP D P S + L R++ +R + + +S S RSKSR RS R
Sbjct: 695 SPPSHDRPRNSEGWEQNGLYEFFRAKMRARRRKGQEKRNSGPSRSRSRSKSRGRSSSRSN 754
Query: 72 RKYRRYSRSYSRSRSRSRSRRYRERRYGFTRRYYRSPSRYRSRSRSRSRSRGRSY 126
+ + S SYSRSRSRS SR Y R +R RS S RSRSRS+SRSR +SY
Sbjct: 755 SRSSKSSGSYSRSRSRSCSRSYSRSR---SRSRSRSRSS-RSRSRSQSRSRSKSY 805
Score = 53.1 bits (126), Expect = 3e-07
Identities = 47/139 (33%), Positives = 65/139 (46%), Gaps = 22/139 (15%)
Query: 39 FSRSSRSHSRVSSRFSSRSRRSKSRSRSRRRHQRKYRRYSRSYSRSRSRSRSR------- 91
+S S R S + R++ R R ++ + + SRSRSRS+SR
Sbjct: 694 YSPPSHDRPRNSEGWEQNGLYEFFRAKMRARRRKGQEKRNSGPSRSRSRSKSRGRSSSRS 753
Query: 92 --RYRERRYGFTRRYYRSPSRYRSRSRSRSRSRGRSYCGRAYAIARGQ-RYYGFGRTVYP 148
R + ++R RS SR SRSRSRSRSR RS R+ + +R + + Y GR
Sbjct: 754 NSRSSKSSGSYSRSRSRSCSRSYSRSRSRSRSRSRSSRSRSRSQSRSRSKSYSPGR---- 809
Query: 149 EEHSRWRDRSRTRSRSRTP 167
R R+RSRS TP
Sbjct: 810 --------RRRSRSRSPTP 820
Score = 46.2 bits (108), Expect = 3e-05
Identities = 32/65 (49%), Positives = 35/65 (53%)
Query: 2 SNYVNDMWPGSPQEKDSPSTSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSK 61
SN + GS S S SRS SR SRSRSRS SRS SR S+ S RR +
Sbjct: 753 SNSRSSKSSGSYSRSRSRSCSRSYSRSRSRSRSRSRSSRSRSRSQSRSRSKSYSPGRRRR 812
Query: 62 SRSRS 66
SRSRS
Sbjct: 813 SRSRS 817
Score = 45.8 bits (107), Expect = 4e-05
Identities = 35/61 (57%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 12 SPQEKDSPSTSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRSRRRHQ 71
S + S S SRS SR SRSRSRS SRS S SR SR SRS RSKS S RRR
Sbjct: 757 SSKSSGSYSRSRSRSCSRSYSRSRSRSRSRSRSSRSR--SRSQSRS-RSKSYSPGRRRRS 813
Query: 72 R 72
R
Sbjct: 814 R 814
>gi|47271443 splicing factor, arginine/serine-rich 2 [Homo sapiens]
Length = 221
Score = 67.8 bits (164), Expect = 1e-11
Identities = 54/116 (46%), Positives = 60/116 (51%), Gaps = 20/116 (17%)
Query: 10 PGSPQEKDSPSTSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRSRRR 69
P S + P R GG RSRS R SRS SR SR SRSR S+S+SRSR
Sbjct: 96 PDSHHSRRGPPPRRYGGGG-YGRRSRSPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSR-- 152
Query: 70 HQRKYRRYSRSYSRSRSRSRSRRYRERRYGFTRRYYRSPSRYRSRSRSRSRSRGRS 125
+RS SRS S+SRS R R +S S RSRSRSRSRSR RS
Sbjct: 153 --------TRSRSRSTSKSRSAR---------RSKSKSSSVSRSRSRSRSRSRSRS 191
Score = 57.0 bits (136), Expect = 2e-08
Identities = 50/112 (44%), Positives = 61/112 (54%), Gaps = 30/112 (26%)
Query: 63 RSRSRRRHQRKYRRYSRSYSRSRSRSRSRRYRERRYGFTRRYYRSPSRYRSRSRSRSRSR 122
RSRS RR +R SRSRSRSRSR R R RY RS SR R+RSRSRS S+
Sbjct: 118 RSRSPRRRRR---------SRSRSRSRSRS-RSR-----SRYSRSKSRSRTRSRSRSTSK 162
Query: 123 GRSYCGRAYAIARGQRYYGFGRTVYPEEHSRWRDRSRTRSRSRTPFRLSEKD 174
RS +R +V SR R RSR+RSRSR+P +S+++
Sbjct: 163 SRS----------ARRSKSKSSSV-----SRSRSRSRSRSRSRSPPPVSKRE 199
Score = 33.5 bits (75), Expect = 0.22
Identities = 35/151 (23%), Positives = 66/151 (43%), Gaps = 26/151 (17%)
Query: 103 RYYRSPSRYRSRSRSRSRSRGRSYCGRAYAIARGQRYYGFGRTVYPEEHSRWRDRSRTRS 162
RY R P + SR R G GR R +R SR R RSR+RS
Sbjct: 91 RYGRPPDSHHSRRGPPPRRYGGGGYGRRSRSPRRRR------------RSRSRSRSRSRS 138
Query: 163 RSRTPFRLSE---KDRMELLEIAKTNAAKALGTTNIDLPASLRTVPSAKETSRGIGVSSN 219
RSR+ + S+ + R +K+ +A+ + ++ ++ SR S +
Sbjct: 139 RSRSRYSRSKSRSRTRSRSRSTSKSRSARR---------SKSKSSSVSRSRSRSRSRSRS 189
Query: 220 GAKPELSEKVTEDGTR--NPNEKPTQQRSIA 248
+ P +S++ ++ +R +P + P ++ +++
Sbjct: 190 RSPPPVSKRESKSRSRSKSPPKSPEEEGAVS 220
>gi|117938254 BCL2-associated transcription factor 1 isoform 3 [Homo
sapiens]
Length = 747
Score = 67.8 bits (164), Expect = 1e-11
Identities = 56/133 (42%), Positives = 62/133 (46%), Gaps = 22/133 (16%)
Query: 33 RSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRSRRRHQRKYRRYSRSYSRSRSRSRSRR 92
RS SRS S S+S S+ SSR SRS K R SR R SR+YSRSRSR R
Sbjct: 3 RSNSRSHSSRSKSRSQSSSRSRSRSHSRKKRYSSRSR--------SRTYSRSRSRDRMYS 54
Query: 93 YRERRYGFTRRYYRSPSRYRSRSRSRSRSRGRSYCGRAYAIARGQRYYGFG-RTVYPEEH 151
RR R R P YR R GR Y G RY+ G R V+ H
Sbjct: 55 RDYRRDYRNNRGMRRPYGYRGR-------------GRGYYQGGGGRYHRGGYRPVWNRRH 101
Query: 152 SRWRDRSRTRSRS 164
SR R R+RSRS
Sbjct: 102 SRSPRRGRSRSRS 114
Score = 64.7 bits (156), Expect = 9e-11
Identities = 59/143 (41%), Positives = 66/143 (46%), Gaps = 15/143 (10%)
Query: 8 MWPGSPQEKDSPSTSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRSR 67
M + + S S SRS SSR SRS SR SSRS SR SR SR R SR
Sbjct: 1 MGRSNSRSHSSRSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDR---MYSRDY 57
Query: 68 RRHQRKYRRYSRSYS-RSRSRSRSR----RYRERRYG--FTRRYYRSPSRYRSRSRSRSR 120
RR R R R Y R R R + RY Y + RR+ RSP R RSRSRS R
Sbjct: 58 RRDYRNNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKR 117
Query: 121 -----SRGRSYCGRAYAIARGQR 138
R RS R+Y +R R
Sbjct: 118 RSVSSQRSRSRSRRSYRSSRSPR 140
Score = 53.9 bits (128), Expect = 2e-07
Identities = 61/147 (41%), Positives = 69/147 (46%), Gaps = 45/147 (30%)
Query: 20 STSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSR-RSKSRSRSR-RRHQRKYRR- 76
S SRS SSR SRS+S S SRS RSHSR R+SSRSR R+ SRSRSR R + R YRR
Sbjct: 4 SNSRSH-SSRSKSRSQSSSRSRS-RSHSR-KKRYSSRSRSRTYSRSRSRDRMYSRDYRRD 60
Query: 77 ------------------------------------YSRSYSRS--RSRSRSRRYRERRY 98
++R +SRS R RSRSR + R
Sbjct: 61 YRNNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRRSV 120
Query: 99 GFTRRYYRSPSRYRSRSRSRSRSRGRS 125
R RS YRS SRS S RS
Sbjct: 121 SSQRSRSRSRRSYRS-SRSPRSSSSRS 146
Score = 37.0 bits (84), Expect = 0.020
Identities = 33/99 (33%), Positives = 47/99 (47%), Gaps = 6/99 (6%)
Query: 25 GGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRSRRRHQRKYR----RYSRS 80
GG + +R SRS R RS SR R S S+RS+SRSR R R R R S
Sbjct: 91 GGYRPVWNRRHSRS-PRRGRSRSRSPKRRSVSSQRSRSRSRRSYRSSRSPRSSSSRSSSP 149
Query: 81 YSRSR-SRSRSRRYRERRYGFTRRYYRSPSRYRSRSRSR 118
YS+S S+ R + ++ + SP + +S+ +
Sbjct: 150 YSKSPVSKRRGSQEKQTKKAEGEPQEESPLKSKSQEEPK 188
Score = 34.3 bits (77), Expect = 0.13
Identities = 26/66 (39%), Positives = 34/66 (51%), Gaps = 20/66 (30%)
Query: 109 SRYRSRSRSRSRSRGRSYCGRAYAIARGQRYYGFGRTVYPEEHSRWRDRSRTRSRSRTPF 168
SR +SRS+S SRSR RS+ +R +RY R RSRT SRSR+
Sbjct: 11 SRSKSRSQSSSRSRSRSH-------SRKKRYSS-------------RSRSRTYSRSRSRD 50
Query: 169 RLSEKD 174
R+ +D
Sbjct: 51 RMYSRD 56
Score = 33.5 bits (75), Expect = 0.22
Identities = 30/78 (38%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 19 PSTSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRS-RRRHQRKYRRY 77
P +R S RSRSRS R S S S R SRSRRS SRS R R Y
Sbjct: 95 PVWNRRHSRSPRRGRSRSRSPKRRSVS----SQRSRSRSRRSYRSSRSPRSSSSRSSSPY 150
Query: 78 SRSYSRSRSRSRSRRYRE 95
S+S R S+ ++ ++
Sbjct: 151 SKSPVSKRRGSQEKQTKK 168
Score = 32.7 bits (73), Expect = 0.38
Identities = 30/90 (33%), Positives = 37/90 (41%), Gaps = 9/90 (10%)
Query: 20 STSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRS---------RRRH 70
S S G SR S R S+ SRS SR S R S R S SRS S RR
Sbjct: 102 SRSPRRGRSRSRSPKRRSVSSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGS 161
Query: 71 QRKYRRYSRSYSRSRSRSRSRRYRERRYGF 100
Q K + + + S +S+ E + F
Sbjct: 162 QEKQTKKAEGEPQEESPLKSKSQEEPKDTF 191
Score = 30.0 bits (66), Expect = 2.5
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
Query: 11 GSPQEKDSPSTSRSGGSSRLSSR-SRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRSRRR 69
GS +++ +P + S + S+ R + SRSS S + SS S + SK +
Sbjct: 546 GSRKQEKTPKDYKEYKSYKDDSKHKREQDHSRSSSSSASPSSPSSREEKESKKEREEEFK 605
Query: 70 HQRKYRRYSRSYSRSRSRSRSRRYRER 96
+ + YS SR R R R R
Sbjct: 606 THHEMKEYSGFAGVSRPRGTFFRIRGR 632
>gi|7661958 BCL2-associated transcription factor 1 isoform 1 [Homo
sapiens]
Length = 920
Score = 67.8 bits (164), Expect = 1e-11
Identities = 56/133 (42%), Positives = 62/133 (46%), Gaps = 22/133 (16%)
Query: 33 RSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRSRRRHQRKYRRYSRSYSRSRSRSRSRR 92
RS SRS S S+S S+ SSR SRS K R SR R SR+YSRSRSR R
Sbjct: 3 RSNSRSHSSRSKSRSQSSSRSRSRSHSRKKRYSSRSR--------SRTYSRSRSRDRMYS 54
Query: 93 YRERRYGFTRRYYRSPSRYRSRSRSRSRSRGRSYCGRAYAIARGQRYYGFG-RTVYPEEH 151
RR R R P YR R GR Y G RY+ G R V+ H
Sbjct: 55 RDYRRDYRNNRGMRRPYGYRGR-------------GRGYYQGGGGRYHRGGYRPVWNRRH 101
Query: 152 SRWRDRSRTRSRS 164
SR R R+RSRS
Sbjct: 102 SRSPRRGRSRSRS 114
Score = 64.7 bits (156), Expect = 9e-11
Identities = 59/143 (41%), Positives = 66/143 (46%), Gaps = 15/143 (10%)
Query: 8 MWPGSPQEKDSPSTSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRSR 67
M + + S S SRS SSR SRS SR SSRS SR SR SR R SR
Sbjct: 1 MGRSNSRSHSSRSKSRSQSSSRSRSRSHSRKKRYSSRSRSRTYSRSRSRDR---MYSRDY 57
Query: 68 RRHQRKYRRYSRSYS-RSRSRSRSR----RYRERRYG--FTRRYYRSPSRYRSRSRSRSR 120
RR R R R Y R R R + RY Y + RR+ RSP R RSRSRS R
Sbjct: 58 RRDYRNNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKR 117
Query: 121 -----SRGRSYCGRAYAIARGQR 138
R RS R+Y +R R
Sbjct: 118 RSVSSQRSRSRSRRSYRSSRSPR 140
Score = 53.9 bits (128), Expect = 2e-07
Identities = 61/147 (41%), Positives = 69/147 (46%), Gaps = 45/147 (30%)
Query: 20 STSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSR-RSKSRSRSR-RRHQRKYRR- 76
S SRS SSR SRS+S S SRS RSHSR R+SSRSR R+ SRSRSR R + R YRR
Sbjct: 4 SNSRSH-SSRSKSRSQSSSRSRS-RSHSR-KKRYSSRSRSRTYSRSRSRDRMYSRDYRRD 60
Query: 77 ------------------------------------YSRSYSRS--RSRSRSRRYRERRY 98
++R +SRS R RSRSR + R
Sbjct: 61 YRNNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRRSV 120
Query: 99 GFTRRYYRSPSRYRSRSRSRSRSRGRS 125
R RS YRS SRS S RS
Sbjct: 121 SSQRSRSRSRRSYRS-SRSPRSSSSRS 146
Score = 37.0 bits (84), Expect = 0.020
Identities = 33/99 (33%), Positives = 47/99 (47%), Gaps = 6/99 (6%)
Query: 25 GGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRSRRRHQRKYR----RYSRS 80
GG + +R SRS R RS SR R S S+RS+SRSR R R R R S
Sbjct: 91 GGYRPVWNRRHSRS-PRRGRSRSRSPKRRSVSSQRSRSRSRRSYRSSRSPRSSSSRSSSP 149
Query: 81 YSRSR-SRSRSRRYRERRYGFTRRYYRSPSRYRSRSRSR 118
YS+S S+ R + ++ + SP + +S+ +
Sbjct: 150 YSKSPVSKRRGSQEKQTKKAEGEPQEESPLKSKSQEEPK 188
Score = 34.3 bits (77), Expect = 0.13
Identities = 26/66 (39%), Positives = 34/66 (51%), Gaps = 20/66 (30%)
Query: 109 SRYRSRSRSRSRSRGRSYCGRAYAIARGQRYYGFGRTVYPEEHSRWRDRSRTRSRSRTPF 168
SR +SRS+S SRSR RS+ +R +RY R RSRT SRSR+
Sbjct: 11 SRSKSRSQSSSRSRSRSH-------SRKKRYSS-------------RSRSRTYSRSRSRD 50
Query: 169 RLSEKD 174
R+ +D
Sbjct: 51 RMYSRD 56
Score = 33.5 bits (75), Expect = 0.22
Identities = 30/78 (38%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 19 PSTSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRS-RRRHQRKYRRY 77
P +R S RSRSRS R S S S R SRSRRS SRS R R Y
Sbjct: 95 PVWNRRHSRSPRRGRSRSRSPKRRSVS----SQRSRSRSRRSYRSSRSPRSSSSRSSSPY 150
Query: 78 SRSYSRSRSRSRSRRYRE 95
S+S R S+ ++ ++
Sbjct: 151 SKSPVSKRRGSQEKQTKK 168
Score = 32.7 bits (73), Expect = 0.38
Identities = 30/90 (33%), Positives = 37/90 (41%), Gaps = 9/90 (10%)
Query: 20 STSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRS---------RRRH 70
S S G SR S R S+ SRS SR S R S R S SRS S RR
Sbjct: 102 SRSPRRGRSRSRSPKRRSVSSQRSRSRSRRSYRSSRSPRSSSSRSSSPYSKSPVSKRRGS 161
Query: 71 QRKYRRYSRSYSRSRSRSRSRRYRERRYGF 100
Q K + + + S +S+ E + F
Sbjct: 162 QEKQTKKAEGEPQEESPLKSKSQEEPKDTF 191
Score = 30.0 bits (66), Expect = 2.5
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
Query: 11 GSPQEKDSPSTSRSGGSSRLSSR-SRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRSRRR 69
GS +++ +P + S + S+ R + SRSS S + SS S + SK +
Sbjct: 719 GSRKQEKTPKDYKEYKSYKDDSKHKREQDHSRSSSSSASPSSPSSREEKESKKEREEEFK 778
Query: 70 HQRKYRRYSRSYSRSRSRSRSRRYRER 96
+ + YS SR R R R R
Sbjct: 779 THHEMKEYSGFAGVSRPRGTFFRIRGR 805
>gi|9558733 transformer-2 alpha [Homo sapiens]
Length = 282
Score = 67.4 bits (163), Expect = 1e-11
Identities = 50/111 (45%), Positives = 58/111 (52%), Gaps = 13/111 (11%)
Query: 14 QEKDSPSTSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSR-RSKSRSRSRRRHQR 72
+E S S S +G +R+ S SRS SRS SRVS S SR RSKSRSRSRR R
Sbjct: 12 RESRSQSKSPTGTPARVKSESRS-----GSRSPSRVSKHSESHSRSRSKSRSRSRRHSHR 66
Query: 73 KYRRYSRSYSRSRSRSRSRRYRERRYGFTRRYYRSPSRYRSRSRSRSRSRG 123
+ Y+RSRS S S R R R +T Y R SR S +R R G
Sbjct: 67 R-------YTRSRSHSHSHRRRSRSRSYTPEYRRRRSRSHSPMSNRRRHTG 110
Score = 50.8 bits (120), Expect = 1e-06
Identities = 41/98 (41%), Positives = 48/98 (48%), Gaps = 14/98 (14%)
Query: 11 GSPQEKDSPSTSRSGGSSRLS------SRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRS 64
G+P S S S S SR+S SRSRS+S SRS R R R RS+S S
Sbjct: 23 GTPARVKSESRSGSRSPSRVSKHSESHSRSRSKSRSRSRRHSHR-------RYTRSRSHS 75
Query: 65 RSRRRHQRKYRRYSRSYSRSRSRSRSRRYRERRYGFTR 102
S RR R R Y+ Y R RSRS S RR+ +R
Sbjct: 76 HSHRRRSRS-RSYTPEYRRRRSRSHSPMSNRRRHTGSR 112
Score = 47.0 bits (110), Expect = 2e-05
Identities = 39/93 (41%), Positives = 47/93 (50%), Gaps = 24/93 (25%)
Query: 41 RSSRSHSRVSSRFSSRSRRSKSRSRSRRRHQRKYRRYSRSYSRSRS--RSRSRRYRERRY 98
R SRS S+ + R KS SRS R + ++S S+SRSRS RSRSRR+ RRY
Sbjct: 12 RESRSQSKSPT---GTPARVKSESRSGSRSPSRVSKHSESHSRSRSKSRSRSRRHSHRRY 68
Query: 99 GFTRRYYRSPSRYRSRSRSRS-----RSRGRSY 126
+RSRS S RSR RSY
Sbjct: 69 --------------TRSRSHSHSHRRRSRSRSY 87
Score = 41.2 bits (95), Expect = 0.001
Identities = 38/98 (38%), Positives = 46/98 (46%), Gaps = 26/98 (26%)
Query: 76 RYSRSYSRSRSRSRSRRYRERRYGFTRRYYRSPSRY------RSRSRSRSRSRGRSYCGR 129
R SRS S+S + + +R E R G RSPSR SRSRS+SRSR R + R
Sbjct: 12 RESRSQSKSPTGTPARVKSESRSGS-----RSPSRVSKHSESHSRSRSKSRSRSRRHSHR 66
Query: 130 AYAIARGQRYYGFGRTVYPEEHSRWRDRSRTRSRSRTP 167
Y +R HS R R+RSRS TP
Sbjct: 67 RYTRSRS------------HSHSH---RRRSRSRSYTP 89
Score = 40.0 bits (92), Expect = 0.002
Identities = 28/61 (45%), Positives = 30/61 (49%), Gaps = 10/61 (16%)
Query: 71 QRKYRRYSRSYSRSRSRSRSRRYRERRYGFTRRYYRSPSRYRSRSRSRSRSRGRSYCGRA 130
+R+ Y R Y R R YR RR RSPS Y SR RSRSRS RSY R
Sbjct: 232 RRRDSYYDRGYDRGYDRYEDYDYRYRR--------RSPSPYYSRYRSRSRS--RSYSPRR 281
Query: 131 Y 131
Y
Sbjct: 282 Y 282
Score = 38.9 bits (89), Expect = 0.005
Identities = 35/110 (31%), Positives = 48/110 (43%), Gaps = 20/110 (18%)
Query: 58 RRSKSRSRSRRRHQRKYRRYSRSYSRSRSRSRSRRYRERRYGFTRRYYRSPSRYRSRSRS 117
R S+S+S+S + + SRS SRS SR ++ S SR RS+SRS
Sbjct: 12 RESRSQSKSPTGTPARVKSESRSGSRSPSR-------------VSKHSESHSRSRSKSRS 58
Query: 118 RSRSRGRSYCGRAYAIARGQRYYGFGRTVYPEEHSRWRDRSRTRSRSRTP 167
RSR R+ + + R R+ PE R RSRS +P
Sbjct: 59 RSRRHSHRRYTRSRSHSHSHRRRSRSRSYTPEYR-------RRRSRSHSP 101
>gi|41327773 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo
sapiens]
Length = 1031
Score = 67.4 bits (163), Expect = 1e-11
Identities = 49/120 (40%), Positives = 59/120 (49%), Gaps = 9/120 (7%)
Query: 11 GSPQEKDSPSTSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRSRRRH 70
GS SPS RS SRSR R R RS SR R SR R+ RSRSR R
Sbjct: 19 GSRSRSRSPSDKRSKRGDDRRSRSRDRD-RRRERSRSRDKRRSRSRDRKRLRRSRSRERD 77
Query: 71 QRKYRRYSRSYSRSRSRSRSRRYRERRYGFTRRYYRSPSRYRSRSRSRSRSRGRSYCGRA 130
+ + RR SRS R RSRSRSR R R SP ++ +RSRS+ ++ G +
Sbjct: 78 RSRERRRSRSRDRRRSRSRSRGRRSRS--------SSPGNKSKKTENRSRSKEKTDGGES 129
Score = 67.0 bits (162), Expect = 2e-11
Identities = 59/147 (40%), Positives = 75/147 (51%), Gaps = 25/147 (17%)
Query: 36 SRSFSRSSRSHSRVSSRFSSRS---RRSK----SRSRSRRRHQRKYRRYSRSYSRSRSRS 88
SR + + S S R SR SRS +RSK RSRSR R +R+ R SR RSRSR
Sbjct: 5 SRHYRKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRSRSRD 64
Query: 89 RSRRYRERRYGFTRRYYRSPSRYRSRSRSRSRSRGRSYCGRAYAIARGQRYYGFGRTVYP 148
R R R R +R RS R RSRSR R RSR RS RG+R R+ P
Sbjct: 65 RKRLRRSR----SRERDRSRERRRSRSRDRRRSRSRS---------RGRR----SRSSSP 107
Query: 149 EEHSRWRDRSRTRSRSRTPFRLSEKDR 175
S+ + +R+RS+ +T S K++
Sbjct: 108 GNKSK-KTENRSRSKEKTDGGESSKEK 133
Score = 41.6 bits (96), Expect = 8e-04
Identities = 52/189 (27%), Positives = 71/189 (37%), Gaps = 20/189 (10%)
Query: 99 GFTRRYYRSPSRYRSRSRSRSRSRGRSYCGRAYAIARGQRYYGFGRTVYPEEHSRWRDRS 158
G R+YR S R RS SRSRSR S R +R G R SR RDR
Sbjct: 2 GRESRHYRKRSASRGRSGSRSRSRSPS-------DKRSKR--GDDR----RSRSRDRDRR 48
Query: 159 RTRSRSRTPFRLSEKDRMELLEIAKTNAAKALGTTNIDLPASLRTVPSAKETSRGIGVSS 218
R RSRSR R +DR L ++ R+ + SR G S
Sbjct: 49 RERSRSRDKRRSRSRDRKRLRRSRSRERDRSRERRR------SRSRDRRRSRSRSRGRRS 102
Query: 219 NGAKPELSEKVTEDGTRNPNEKPTQQRSIAFSSNNSVAKPIQKSAKAATEEASSRSPKID 278
+ P K TE+ +R+ EK S + K +K A + + ++
Sbjct: 103 RSSSPGNKSKKTENRSRS-KEKTDGGESSKEKKKDKDDKEDEKEKDAGNFDQNKLEEEMR 161
Query: 279 QKKSPYGLW 287
++K W
Sbjct: 162 KRKERVEKW 170
Score = 36.6 bits (83), Expect = 0.027
Identities = 30/76 (39%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 22 SRSGGSSRLS-SRSRSRSFSRSSR-SHSRVSSRFSSRSRRSKSRSRSRRRHQRKYRRYSR 79
SRS RL SRSR R SR R S SR R SRSR +SRS S +K SR
Sbjct: 60 SRSRDRKRLRRSRSRERDRSRERRRSRSRDRRRSRSRSRGRRSRSSSPGNKSKKTENRSR 119
Query: 80 SYSRSRSRSRSRRYRE 95
S ++ S+ ++
Sbjct: 120 SKEKTDGGESSKEKKK 135
Score = 31.6 bits (70), Expect = 0.85
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 20 STSRSGGSSRLSSRSRSRSFSRS-SRSHSRVSSRFSSRSRRSKSRSRSRRRHQRKYRRYS 78
S SR SR RSRSR RS SRS R S S ++ K+ +RSR + + S
Sbjct: 71 SRSRERDRSRERRRSRSRDRRRSRSRSRGRRSRSSSPGNKSKKTENRSRSKEKTDGGESS 130
Query: 79 RSYSRSRSRSRSRRYRE 95
+ + + + ++
Sbjct: 131 KEKKKDKDDKEDEKEKD 147
>gi|239756568 PREDICTED: similar to BCL2-associated transcription
factor 1 [Homo sapiens]
Length = 869
Score = 66.2 bits (160), Expect = 3e-11
Identities = 63/142 (44%), Positives = 73/142 (51%), Gaps = 30/142 (21%)
Query: 20 STSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRSR-RRHQRKYRRYS 78
S SRS SSR SRS+S S SRS RSHSR R+ SRSR + SRSRSR R + R YR
Sbjct: 4 SNSRSH-SSRSKSRSQSSSRSRS-RSHSR-KKRYRSRSR-TYSRSRSRDRMYSRDYR--- 56
Query: 79 RSYSRSRSRSRSRRYRERRYGF-----------------TRRYYRSPSRYRSRSRSRSR- 120
R Y +R+ R YR R G+ RR+ RSP R RSRSRS R
Sbjct: 57 RDYRNNRAMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRR 116
Query: 121 ----SRGRSYCGRAYAIARGQR 138
R RS R+Y +R R
Sbjct: 117 SVSSQRSRSRSRRSYRSSRSPR 138
Score = 58.2 bits (139), Expect = 9e-09
Identities = 49/115 (42%), Positives = 58/115 (50%), Gaps = 7/115 (6%)
Query: 52 RFSSRSRRSKSRSRSRRRHQRKYRRYSRSYSR-SRSRSRSRRYRERRYGFTRRYYRSPSR 110
R +SRS S+S+SRS Q R SRS+SR R RSRSR Y R R Y R R
Sbjct: 3 RSNSRSHSSRSKSRS----QSSSRSRSRSHSRKKRYRSRSRTYSRSR-SRDRMYSRDYRR 57
Query: 111 YRSRSRSRSRSRGRSYCGRAYAIARGQRYYGFG-RTVYPEEHSRWRDRSRTRSRS 164
+R+ R G GR Y G RY+ G R V+ HSR R R+RSRS
Sbjct: 58 DYRNNRAMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRS 112
Score = 33.5 bits (75), Expect = 0.22
Identities = 30/78 (38%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 19 PSTSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRS-RRRHQRKYRRY 77
P +R S RSRSRS R S S S R SRSRRS SRS R R Y
Sbjct: 93 PVWNRRHSRSPRRGRSRSRSPKRRSVS----SQRSRSRSRRSYRSSRSPRSSSSRSSSPY 148
Query: 78 SRSYSRSRSRSRSRRYRE 95
S+S R S+ ++ ++
Sbjct: 149 SKSPVSKRRGSQEKQTKK 166
Score = 30.8 bits (68), Expect = 1.5
Identities = 33/84 (39%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Query: 20 STSRSGGSSRLSS-RSRSRS--FSRSSRSHSRVSSRFSSRSRRSKSRSRSRRRHQRKYRR 76
S SRS +SS RSRSRS RSSRS SSR S S SKS RR Q K +
Sbjct: 108 SRSRSPKRRSVSSQRSRSRSRRSYRSSRSPRSSSSR--SSSPYSKSPVSKRRGSQEKQTK 165
Query: 77 YSRSYSRSRSRSRSRRYRERRYGF 100
+ + S +S+ E + F
Sbjct: 166 KAEGELQEESPLKSKSQEEPKDTF 189
>gi|169218320 PREDICTED: similar to BCL2-associated transcription
factor 1 isoform 2 [Homo sapiens]
Length = 869
Score = 66.2 bits (160), Expect = 3e-11
Identities = 63/142 (44%), Positives = 73/142 (51%), Gaps = 30/142 (21%)
Query: 20 STSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRSR-RRHQRKYRRYS 78
S SRS SSR SRS+S S SRS RSHSR R+ SRSR + SRSRSR R + R YR
Sbjct: 4 SNSRSH-SSRSKSRSQSSSRSRS-RSHSR-KKRYRSRSR-TYSRSRSRDRMYSRDYR--- 56
Query: 79 RSYSRSRSRSRSRRYRERRYGF-----------------TRRYYRSPSRYRSRSRSRSR- 120
R Y +R+ R YR R G+ RR+ RSP R RSRSRS R
Sbjct: 57 RDYRNNRAMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRR 116
Query: 121 ----SRGRSYCGRAYAIARGQR 138
R RS R+Y +R R
Sbjct: 117 SVSSQRSRSRSRRSYRSSRSPR 138
Score = 58.2 bits (139), Expect = 9e-09
Identities = 49/115 (42%), Positives = 58/115 (50%), Gaps = 7/115 (6%)
Query: 52 RFSSRSRRSKSRSRSRRRHQRKYRRYSRSYSR-SRSRSRSRRYRERRYGFTRRYYRSPSR 110
R +SRS S+S+SRS Q R SRS+SR R RSRSR Y R R Y R R
Sbjct: 3 RSNSRSHSSRSKSRS----QSSSRSRSRSHSRKKRYRSRSRTYSRSR-SRDRMYSRDYRR 57
Query: 111 YRSRSRSRSRSRGRSYCGRAYAIARGQRYYGFG-RTVYPEEHSRWRDRSRTRSRS 164
+R+ R G GR Y G RY+ G R V+ HSR R R+RSRS
Sbjct: 58 DYRNNRAMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRS 112
Score = 33.5 bits (75), Expect = 0.22
Identities = 30/78 (38%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 19 PSTSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRS-RRRHQRKYRRY 77
P +R S RSRSRS R S S S R SRSRRS SRS R R Y
Sbjct: 93 PVWNRRHSRSPRRGRSRSRSPKRRSVS----SQRSRSRSRRSYRSSRSPRSSSSRSSSPY 148
Query: 78 SRSYSRSRSRSRSRRYRE 95
S+S R S+ ++ ++
Sbjct: 149 SKSPVSKRRGSQEKQTKK 166
Score = 31.2 bits (69), Expect = 1.1
Identities = 33/84 (39%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Query: 20 STSRSGGSSRLSS-RSRSRS--FSRSSRSHSRVSSRFSSRSRRSKSRSRSRRRHQRKYRR 76
S SRS +SS RSRSRS RSSRS SSR S S SKS RR Q K +
Sbjct: 108 SRSRSPKRRSVSSQRSRSRSRRSYRSSRSPRSSSSR--SSSPYSKSPVSKRRGSQEKQTK 165
Query: 77 YSRSYSRSRSRSRSRRYRERRYGF 100
+ + S +S+ E + F
Sbjct: 166 KAEGEPQEESPLKSKSQEEPKDTF 189
>gi|117938251 BCL2-associated transcription factor 1 isoform 2 [Homo
sapiens]
Length = 869
Score = 65.9 bits (159), Expect = 4e-11
Identities = 63/142 (44%), Positives = 72/142 (50%), Gaps = 30/142 (21%)
Query: 20 STSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRSR-RRHQRKYRRYS 78
S SRS SSR SRS+S S SRS RSHSR R+ SRSR + SRSRSR R + R YR
Sbjct: 4 SNSRSH-SSRSKSRSQSSSRSRS-RSHSR-KKRYRSRSR-TYSRSRSRDRMYSRDYR--- 56
Query: 79 RSYSRSRSRSRSRRYRERRYGF-----------------TRRYYRSPSRYRSRSRSRSR- 120
R Y +R R YR R G+ RR+ RSP R RSRSRS R
Sbjct: 57 RDYRNNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRSPKRR 116
Query: 121 ----SRGRSYCGRAYAIARGQR 138
R RS R+Y +R R
Sbjct: 117 SVSSQRSRSRSRRSYRSSRSPR 138
Score = 57.8 bits (138), Expect = 1e-08
Identities = 49/115 (42%), Positives = 57/115 (49%), Gaps = 7/115 (6%)
Query: 52 RFSSRSRRSKSRSRSRRRHQRKYRRYSRSYSR-SRSRSRSRRYRERRYGFTRRYYRSPSR 110
R +SRS S+S+SRS Q R SRS+SR R RSRSR Y R R Y R R
Sbjct: 3 RSNSRSHSSRSKSRS----QSSSRSRSRSHSRKKRYRSRSRTYSRSR-SRDRMYSRDYRR 57
Query: 111 YRSRSRSRSRSRGRSYCGRAYAIARGQRYYGFG-RTVYPEEHSRWRDRSRTRSRS 164
+R R G GR Y G RY+ G R V+ HSR R R+RSRS
Sbjct: 58 DYRNNRGMRRPYGYRGRGRGYYQGGGGRYHRGGYRPVWNRRHSRSPRRGRSRSRS 112
Score = 33.5 bits (75), Expect = 0.22
Identities = 30/78 (38%), Positives = 37/78 (47%), Gaps = 5/78 (6%)
Query: 19 PSTSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRS-RRRHQRKYRRY 77
P +R S RSRSRS R S S S R SRSRRS SRS R R Y
Sbjct: 93 PVWNRRHSRSPRRGRSRSRSPKRRSVS----SQRSRSRSRRSYRSSRSPRSSSSRSSSPY 148
Query: 78 SRSYSRSRSRSRSRRYRE 95
S+S R S+ ++ ++
Sbjct: 149 SKSPVSKRRGSQEKQTKK 166
Score = 31.2 bits (69), Expect = 1.1
Identities = 33/84 (39%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Query: 20 STSRSGGSSRLSS-RSRSRS--FSRSSRSHSRVSSRFSSRSRRSKSRSRSRRRHQRKYRR 76
S SRS +SS RSRSRS RSSRS SSR S S SKS RR Q K +
Sbjct: 108 SRSRSPKRRSVSSQRSRSRSRRSYRSSRSPRSSSSR--SSSPYSKSPVSKRRGSQEKQTK 165
Query: 77 YSRSYSRSRSRSRSRRYRERRYGF 100
+ + S +S+ E + F
Sbjct: 166 KAEGEPQEESPLKSKSQEEPKDTF 189
Score = 29.3 bits (64), Expect = 4.2
Identities = 28/117 (23%), Positives = 46/117 (39%), Gaps = 2/117 (1%)
Query: 11 GSPQEKDSPSTSRSGGSSRLSSR-SRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRSRRR 69
GS +++ +P + S + S+ R + SRSS S + SS S + SK +
Sbjct: 717 GSRKQEKTPKDYKEYKSYKDDSKHKREQDHSRSSSSSASPSSPSSREEKESKKEREEEFK 776
Query: 70 HQRKYRRYSRSYSRSRSRSRSRRYRERRYGFTRRYYRSPSRY-RSRSRSRSRSRGRS 125
+ + YS SR R R+ + + R + R R R + G S
Sbjct: 777 THHEMKEYSGFAGVSRPRGTFHDDRDDGVDYWAKRGRGRGTFQRGRGRFNFKKSGSS 833
>gi|50083281 KIAA1853 protein [Homo sapiens]
Length = 611
Score = 65.9 bits (159), Expect = 4e-11
Identities = 72/201 (35%), Positives = 88/201 (43%), Gaps = 52/201 (25%)
Query: 12 SPQEKDSPSTSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRS-------KSRS 64
SP + SP ++S +S RS SRS S SS+S R SSRSRRS SR
Sbjct: 407 SPNPRASPRYTQSRSTSS-EKRSYSRSPSYSSKSGKRSPPSRSSRSRRSPSYSRYSPSRE 465
Query: 65 R--------SRRRHQRKYRRYSRSYS--RSRSRSRSRRYRERRYGFTRR----YY----- 105
R S++R + + RR RSYS R R R RR R+ YY
Sbjct: 466 RDPKYSEKDSQQRERERARRRRRSYSPMRKRRRDSPSHLEARRITSARKRPIPYYRPSPS 525
Query: 106 -----------------RSPSRYRSRSRSRSRSRGRSYCGRAYAIARGQRYYGFGRTVYP 148
RS SR SRSRSRSRSR RS + + + R+ P
Sbjct: 526 SSGSLSSTSSWYSSSSSRSASRSYSRSRSRSRSRRRSRTRTSSSSS--------SRSPSP 577
Query: 149 EEHSRWRDRSRTRSRSRTPFR 169
SR R RSR+RSRSR+ R
Sbjct: 578 GSRSRSRSRSRSRSRSRSQSR 598
Score = 62.4 bits (150), Expect = 5e-10
Identities = 52/119 (43%), Positives = 62/119 (52%), Gaps = 12/119 (10%)
Query: 10 PGSPQEKDSPS--TSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRSR 67
P + +DSPS +R S+R R SS S S SS +SS S RS SRS SR
Sbjct: 492 PMRKRRRDSPSHLEARRITSARKRPIPYYRPSPSSSGSLSSTSSWYSSSSSRSASRSYSR 551
Query: 68 RRHQRKYRRYSRSYSRSRSRSRSRRYRERRYGFTRRYYRSPSRYRSRSRSRSRSRGRSY 126
R + + RR SR+ + S S SRS RS SR RSRSRSRSRS+ RSY
Sbjct: 552 SRSRSRSRRRSRTRTSSSSSSRSPSPGS----------RSRSRSRSRSRSRSRSQSRSY 600
Score = 60.1 bits (144), Expect = 2e-09
Identities = 49/98 (50%), Positives = 53/98 (54%), Gaps = 14/98 (14%)
Query: 10 PGSPQEKDSPSTSRSGGSSRLSSRSRSRSFSRSS---RSHSRVSSRFSSRSRRSKSRSRS 66
P S S S+ S SSR +SRS SRS SRS RS +R SS SSRS SRSRS
Sbjct: 524 PSSSGSLSSTSSWYSSSSSRSASRSYSRSRSRSRSRRRSRTRTSSSSSSRSPSPGSRSRS 583
Query: 67 RRRHQRKYRRYSRSYSRSRSRSRSRRYRER-RYGFTRR 103
R SRS SRSRSRS+SR Y Y TRR
Sbjct: 584 R----------SRSRSRSRSRSQSRSYSSADSYSSTRR 611
Score = 57.0 bits (136), Expect = 2e-08
Identities = 73/271 (26%), Positives = 108/271 (39%), Gaps = 56/271 (20%)
Query: 19 PSTSRSG---GSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRSRRRHQRKYR 75
PST+RS G SR SS + +RS S SSRS + R S R +S+S S +R + R
Sbjct: 378 PSTARSSPMKGCSRSSSYASTRSSSHSSRSPN---PRASPRYTQSRSTSSEKRSYSRSPS 434
Query: 76 RYSRSYSRSRSRSRSRRYRERRYGFTRRYYRSPSRYRSRSRSRSRSRGRSYCGRAYAIAR 135
S+S RS SR R Y RY SPSR R S S+ R
Sbjct: 435 YSSKSGKRSPPSRSSRSRRSPSYS---RY--SPSRERDPKYSEKDSQQRE---------- 479
Query: 136 GQRYYGFGRTVYPEEHSRWRDRSRTRSRSRTPFRLSEKDRMELLEIAKTNAAKALGTTNI 195
R+R+R R RS +P R +D LE + +A+
Sbjct: 480 -------------------RERARRRRRSYSPMRKRRRDSPSHLEARRITSARK------ 514
Query: 196 DLPASLRTVP---SAKETSRGIGVSSNGAKPELSEKVTEDGTRNPNEKPTQQRS-IAFSS 251
R +P + +S + +S+ S + +R+ + +++RS SS
Sbjct: 515 ------RPIPYYRPSPSSSGSLSSTSSWYSSSSSRSASRSYSRSRSRSRSRRRSRTRTSS 568
Query: 252 NNSVAKPIQKSAKAATEEASSRSPKIDQKKS 282
++S P S + + SRS Q +S
Sbjct: 569 SSSSRSPSPGSRSRSRSRSRSRSRSRSQSRS 599
Score = 51.6 bits (122), Expect = 8e-07
Identities = 46/95 (48%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
Query: 13 PQEKDSPSTSRS-GGSSRLSSRSRSRSFSRS-SRSHSRVSSRFSSRSRRSKSRSRSRRRH 70
P + SPS+S S +S S S SRS SRS SRS SR SR SR+R S S S
Sbjct: 518 PYYRPSPSSSGSLSSTSSWYSSSSSRSASRSYSRSRSRSRSRRRSRTRTSSSSS------ 571
Query: 71 QRKYRRYSRSYSRSRSRSRSR-RYRERRYGFTRRY 104
R SRS SRSRSRSRSR R + R Y Y
Sbjct: 572 SRSPSPGSRSRSRSRSRSRSRSRSQSRSYSSADSY 606
Score = 50.4 bits (119), Expect = 2e-06
Identities = 36/119 (30%), Positives = 54/119 (45%), Gaps = 2/119 (1%)
Query: 11 GSPQEKDSPSTSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRSRRRH 70
G ++K S R SS S + + +SS+ H R S FS + R S S +S+RR
Sbjct: 108 GKKKKKKSTRKKRRRSSSYSPSPVKKKK-KKSSKKHKRRRS-FSKKRRHSSSSPKSKRRD 165
Query: 71 QRKYRRYSRSYSRSRSRSRSRRYRERRYGFTRRYYRSPSRYRSRSRSRSRSRGRSYCGR 129
++++++ SRS R R R R R R SR+R RS + R + R
Sbjct: 166 EKRHKKQSRSRPRKSHRHRHHRCPSRSQSSESRPSSCESRHRGRSPEEGQKSRRRHSRR 224
Score = 45.8 bits (107), Expect = 4e-05
Identities = 35/107 (32%), Positives = 52/107 (48%), Gaps = 13/107 (12%)
Query: 31 SSRSRSRSFSRSSRSHSRVSSRFS----SRSRRSKSRSRSRRRHQRKYRRYSRSYSRSRS 86
SSR + + +S+R R SS +S + ++ S+ RRR K RR+S S +S+
Sbjct: 105 SSRGKKKK-KKSTRKKRRRSSSYSPSPVKKKKKKSSKKHKRRRSFSKKRRHSSSSPKSKR 163
Query: 87 RSRSRRYRER----RYGFTRRYYRSPSRYRSR----SRSRSRSRGRS 125
R R ++ R R++R PSR +S S SR RGRS
Sbjct: 164 RDEKRHKKQSRSRPRKSHRHRHHRCPSRSQSSESRPSSCESRHRGRS 210
Score = 40.8 bits (94), Expect = 0.001
Identities = 37/112 (33%), Positives = 49/112 (43%), Gaps = 10/112 (8%)
Query: 18 SPSTSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRS-RRSKSRSRSRRRHQRKYRR 76
SPS + R RSFS+ R HS S + R +R K +SRSR R ++R
Sbjct: 127 SPSPVKKKKKKSSKKHKRRRSFSKKRR-HSSSSPKSKRRDEKRHKKQSRSRPRKSHRHRH 185
Query: 77 YSRSYSRSR-SRSRSRRYRERRYGFTRRYYRSPSRYRSRSRSRSRSRGRSYC 127
+ R SRS+ S SR R G RSP + R SR ++ C
Sbjct: 186 H-RCPSRSQSSESRPSSCESRHRG------RSPEEGQKSRRRHSRRCSKTLC 230
>gi|72534660 splicing factor, arginine/serine-rich 7 [Homo sapiens]
Length = 238
Score = 65.5 bits (158), Expect = 5e-11
Identities = 60/151 (39%), Positives = 70/151 (46%), Gaps = 35/151 (23%)
Query: 27 SSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRSRRRHQRKYRRYSRSYSRSRS 86
S R SRSRSRS SRS R SR SRSR +SRS S RR + R SRS S RS
Sbjct: 123 SRRRRSRSRSRS---HSRSRGRRYSRSRSRSRGRRSRSASPRRSRSISLRRSRSASLRRS 179
Query: 87 RSRSRRYRERRYGFTRRYYRSPSRYRSRSRSRSRSRGRSYCGRAYAIARGQRYYGFGRTV 146
RS S + RY++SPSR RSRSRS SR R
Sbjct: 180 RSGSIK--------GSRYFQSPSRSRSRSRSISRPRS----------------------- 208
Query: 147 YPEEHSRWRDRSRTRSRSRTPFRLSEKDRME 177
SR R+RS S +P R + +RM+
Sbjct: 209 -SRSKSRSPSPKRSRSPSGSPRRSASPERMD 238
Score = 59.3 bits (142), Expect = 4e-09
Identities = 53/111 (47%), Positives = 57/111 (51%), Gaps = 12/111 (10%)
Query: 23 RSGGSSRLSSRSRSRSFSRS-SRSHSRVSSRFSSRSRRSKSRSRSRRRHQRKYR------ 75
RS SR SRSR R +SRS SRS R S S R RS S RSR R+ R
Sbjct: 127 RSRSRSRSHSRSRGRRYSRSRSRSRGRRSRSASPRRSRSISLRRSRSASLRRSRSGSIKG 186
Query: 76 -RYSRSYSRSRSRSRSRRYRERRYGFTRRYYRSPSRYRSRSRSRSRSRGRS 125
RY +S SRSRSRSRS R +R RSPS RSRS S S R S
Sbjct: 187 SRYFQSPSRSRSRSRS----ISRPRSSRSKSRSPSPKRSRSPSGSPRRSAS 233
Score = 41.2 bits (95), Expect = 0.001
Identities = 33/78 (42%), Positives = 39/78 (50%)
Query: 12 SPQEKDSPSTSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRSRRRHQ 71
SP+ S S RS +S SRS S SR +S SR SR S SR SRS+SR
Sbjct: 159 SPRRSRSISLRRSRSASLRRSRSGSIKGSRYFQSPSRSRSRSRSISRPRSSRSKSRSPSP 218
Query: 72 RKYRRYSRSYSRSRSRSR 89
++ R S S RS S R
Sbjct: 219 KRSRSPSGSPRRSASPER 236
Score = 40.0 bits (92), Expect = 0.002
Identities = 38/81 (46%), Positives = 40/81 (49%), Gaps = 8/81 (9%)
Query: 11 GSPQEKDSPSTSRSGGSSRLSSRSRSRSFS-RSSRSHSRVSSRFSSRSRRSKSRSRSRRR 69
G SP SRS S RSRS S R SRS S SR+ RS+SRSRS R
Sbjct: 152 GRRSRSASPRRSRS------ISLRRSRSASLRRSRSGSIKGSRYFQSPSRSRSRSRSISR 205
Query: 70 HQRKYRRYSRSYSRSRSRSRS 90
R R SRS S RSRS S
Sbjct: 206 -PRSSRSKSRSPSPKRSRSPS 225
>gi|88758580 cyclin L2 isoform A [Homo sapiens]
Length = 520
Score = 65.1 bits (157), Expect = 7e-11
Identities = 46/115 (40%), Positives = 60/115 (52%), Gaps = 6/115 (5%)
Query: 12 SPQEKDSPSTSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRSRRRHQ 71
SP+ + S S S SGGS S+SRSRS S S + S+ + R +S+ + Q
Sbjct: 400 SPKRRKSDSGSTSGGSK---SQSRSRSRSDSPPRQAPRSAPYKGSEIRGSRKSKDCKYPQ 456
Query: 72 RKYRRYSRSYSRSRSRSRSRRYRERRYGFTRRYYRSPSRYRSRSRSRSRSRGRSY 126
+ ++ SRS SRSRSRSR R +Y YYR R RSRS R+ GR Y
Sbjct: 457 KPHKSRSRSSSRSRSRSRERADNPGKYKKKSHYYRDQRRERSRSYERT---GRRY 508
Score = 60.1 bits (144), Expect = 2e-09
Identities = 56/152 (36%), Positives = 66/152 (43%), Gaps = 23/152 (15%)
Query: 17 DSPSTSR-SGGSSRLSSRSRSRSFSRS---SRSHSRVSSRFSSRSRRSKSRSRSRRRHQR 72
DSP G SR SRSR +S+SRS S S R S S S SKS+SRSR R
Sbjct: 368 DSPVNGLPKGRESRSRSRSREQSYSRSPSRSASPKRRKSDSGSTSGGSKSQSRSRSRSDS 427
Query: 73 KYRRYSRSYSRSRSRSRSRRYRERRYGFTRRYYRSPSRYRSRSRSRSRSRGRSYCGRAYA 132
R+ RS S R R + +Y + P + RSRS SRSRSR R
Sbjct: 428 PPRQAPRSAPYKGSEIRGSRKSK-----DCKYPQKPHKSRSRSSSRSRSRSRERADNPGK 482
Query: 133 IARGQRYYGFGRTVYPEEHSRWRDRSRTRSRS 164
+ YY RD+ R RSRS
Sbjct: 483 YKKKSHYY--------------RDQRRERSRS 500
Score = 59.7 bits (143), Expect = 3e-09
Identities = 51/158 (32%), Positives = 75/158 (47%), Gaps = 19/158 (12%)
Query: 12 SPQEKDSPSTSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRSRRRHQ 71
+P+ +SP + S LS ++ R + ++ + + R S+SRSRSR +
Sbjct: 332 APKLVESPKEGKGSKPSPLSVKNTKRRLEGAKKAKADSPVNGLPKGRESRSRSRSREQ-- 389
Query: 72 RKYRRYSRSYSRSRSRSRSRRYRERRYGFTRRYYRSPSRYRSRSRSRSRSRGRSYCGRAY 131
SYSRS SRS S + R+ G T +S SR RSRS S R RS
Sbjct: 390 --------SYSRSPSRSASPKRRKSDSGSTSGGSKSQSRSRSRSDSPPRQAPRS------ 435
Query: 132 AIARGQRYYGFGRT---VYPEEHSRWRDRSRTRSRSRT 166
A +G G ++ YP++ + R RS +RSRSR+
Sbjct: 436 APYKGSEIRGSRKSKDCKYPQKPHKSRSRSSSRSRSRS 473
Score = 33.1 bits (74), Expect = 0.29
Identities = 27/71 (38%), Positives = 33/71 (46%), Gaps = 7/71 (9%)
Query: 15 EKDSPSTSRSGGSSRLSSRSRSRSFSRSSRSHSRVSSRFSSRSRRSKSRSRSRRRHQRKY 74
+K S SRS SSRSRSRS R+ R +R + RSRS R R+Y
Sbjct: 456 QKPHKSRSRS------SSRSRSRSRERADNPGKYKKKSHYYRDQR-RERSRSYERTGRRY 508
Query: 75 RRYSRSYSRSR 85
R +SR R
Sbjct: 509 ERDHPGHSRHR 519
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.123 0.343
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,174,392
Number of Sequences: 37866
Number of extensions: 428962
Number of successful extensions: 11517
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 240
Number of HSP's successfully gapped in prelim test: 167
Number of HSP's that attempted gapping in prelim test: 2528
Number of HSP's gapped (non-prelim): 2283
length of query: 290
length of database: 18,247,518
effective HSP length: 101
effective length of query: 189
effective length of database: 14,423,052
effective search space: 2725956828
effective search space used: 2725956828
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.