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Search of human proteins with 46276880
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|46276880 BCL2-like 11 isoform 9 [Homo sapiens]
(112 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|46276880 BCL2-like 11 isoform 9 [Homo sapiens] 238 8e-64
gi|5729740 BCL2-like 11 isoform 6 [Homo sapiens] 152 6e-38
gi|20336315 BCL2-like 11 isoform 1 [Homo sapiens] 111 1e-25
gi|7662302 TBK1 binding protein 1 [Homo sapiens] 33 0.064
gi|15718767 TRAAK [Homo sapiens] 32 0.083
gi|169213924 PREDICTED: leucine rich repeat containing 68 [Homo ... 31 0.19
gi|169214345 PREDICTED: leucine rich repeat containing 68 [Homo ... 31 0.19
gi|169213302 PREDICTED: leucine rich repeat containing 68 [Homo ... 31 0.19
gi|157743257 POU domain, class 6, transcription factor 2 [Homo s... 31 0.19
gi|238859653 pleckstrin homology domain containing family A memb... 31 0.24
gi|14327896 cyclin B1 [Homo sapiens] 31 0.24
gi|62988361 absent in melanoma 1 [Homo sapiens] 31 0.24
gi|210147487 akirin 1 isoform 2 [Homo sapiens] 31 0.24
gi|13375791 akirin 1 isoform 1 [Homo sapiens] 31 0.24
gi|209571519 cysteine rich BMP regulator 2 isoform 1 [Homo sapiens] 30 0.32
gi|148368962 NKF3 kinase family member [Homo sapiens] 30 0.32
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 30 0.32
gi|42718017 retinoblastoma binding protein 8 isoform b [Homo sap... 30 0.41
gi|42718015 retinoblastoma binding protein 8 isoform a [Homo sap... 30 0.41
gi|4506441 retinoblastoma binding protein 8 isoform a [Homo sapi... 30 0.41
gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3 ... 30 0.41
gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2 ... 30 0.41
gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1 [... 30 0.41
gi|26051231 lactamase, beta isoform a [Homo sapiens] 30 0.41
gi|26051233 lactamase, beta isoform b [Homo sapiens] 30 0.41
gi|239582735 radial spoke head 4 homolog A isoform 2 [Homo sapiens] 30 0.54
gi|58219006 radial spoke head 4 homolog A isoform 1 [Homo sapiens] 30 0.54
gi|114431236 zinc finger protein 462 [Homo sapiens] 30 0.54
gi|39930351 dynamin binding protein [Homo sapiens] 30 0.54
gi|153791350 replication initiator 1 isoform 1 [Homo sapiens] 30 0.54
>gi|46276880 BCL2-like 11 isoform 9 [Homo sapiens]
Length = 112
Score = 238 bits (607), Expect = 8e-64
Identities = 112/112 (100%), Positives = 112/112 (100%)
Query: 1 MAKQPSDVSSECDREGRQLQPAERPPQLRPGAPTSLQTEPQDRSPAPMSCDKSTQTPSPP 60
MAKQPSDVSSECDREGRQLQPAERPPQLRPGAPTSLQTEPQDRSPAPMSCDKSTQTPSPP
Sbjct: 1 MAKQPSDVSSECDREGRQLQPAERPPQLRPGAPTSLQTEPQDRSPAPMSCDKSTQTPSPP 60
Query: 61 CQAFNHYLSAMVVILEDIGDLSLCFGFIFTGLDLYGHHHSQDTEQLNHKDFS 112
CQAFNHYLSAMVVILEDIGDLSLCFGFIFTGLDLYGHHHSQDTEQLNHKDFS
Sbjct: 61 CQAFNHYLSAMVVILEDIGDLSLCFGFIFTGLDLYGHHHSQDTEQLNHKDFS 112
>gi|5729740 BCL2-like 11 isoform 6 [Homo sapiens]
Length = 138
Score = 152 bits (384), Expect = 6e-38
Identities = 71/71 (100%), Positives = 71/71 (100%)
Query: 1 MAKQPSDVSSECDREGRQLQPAERPPQLRPGAPTSLQTEPQDRSPAPMSCDKSTQTPSPP 60
MAKQPSDVSSECDREGRQLQPAERPPQLRPGAPTSLQTEPQDRSPAPMSCDKSTQTPSPP
Sbjct: 1 MAKQPSDVSSECDREGRQLQPAERPPQLRPGAPTSLQTEPQDRSPAPMSCDKSTQTPSPP 60
Query: 61 CQAFNHYLSAM 71
CQAFNHYLSAM
Sbjct: 61 CQAFNHYLSAM 71
>gi|20336315 BCL2-like 11 isoform 1 [Homo sapiens]
Length = 198
Score = 111 bits (278), Expect = 1e-25
Identities = 66/131 (50%), Positives = 67/131 (51%), Gaps = 60/131 (45%)
Query: 1 MAKQPSDVSSECDREGRQLQPAERPPQLRPGAPTSLQTEPQDR----------------- 43
MAKQPSDVSSECDREGRQLQPAERPPQLRPGAPTSLQTEPQ
Sbjct: 1 MAKQPSDVSSECDREGRQLQPAERPPQLRPGAPTSLQTEPQGNPEGNHGGEGDSCPHGSP 60
Query: 44 --------SPAPMS-----------------------------------CDKSTQTPSPP 60
SP P + CDKSTQTPSPP
Sbjct: 61 QGPLAPPASPGPFATRSPLFIFMRRSSLLSRSSSGYFSFDTDRSPAPMSCDKSTQTPSPP 120
Query: 61 CQAFNHYLSAM 71
CQAFNHYLSAM
Sbjct: 121 CQAFNHYLSAM 131
>gi|7662302 TBK1 binding protein 1 [Homo sapiens]
Length = 615
Score = 32.7 bits (73), Expect = 0.064
Identities = 17/36 (47%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 26 PQLRPGAPTSLQT-EPQDRSPAPMSCDKSTQTPSPP 60
PQ R P S Q+ PQ RSP P SC P PP
Sbjct: 396 PQRRSPVPPSCQSPSPQRRSPVPPSCPAPQPRPPPP 431
Score = 31.2 bits (69), Expect = 0.19
Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 5/40 (12%)
Query: 21 PAERPPQLR-PGAPTSLQTEPQDRSPAPMSCDKSTQTPSP 59
P P Q R P +P+ PQ RSP P SC Q+PSP
Sbjct: 376 PCPSPQQRRSPASPSCPSPVPQRRSPVPPSC----QSPSP 411
>gi|15718767 TRAAK [Homo sapiens]
Length = 393
Score = 32.3 bits (72), Expect = 0.083
Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Query: 14 REGRQLQPAERPPQLRPGAPTSLQTEPQDRSPAPMSCDKSTQTPSPPCQAFNHYLSAMVV 73
R G P E+ L P P Q + RSP+P + Q PSPP + Y S +
Sbjct: 289 RAGPAAPPPEKEQPLLPPPPCPAQPLGRPRSPSP---PEKAQPPSPPTASALDYPSENLA 345
Query: 74 ILEDIGD 80
+++ D
Sbjct: 346 FIDESSD 352
>gi|169213924 PREDICTED: leucine rich repeat containing 68 [Homo
sapiens]
Length = 625
Score = 31.2 bits (69), Expect = 0.19
Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Query: 6 SDVSSECDRE---GRQLQPAERPPQLRPGAPTSLQTEPQDRSPAPMSCDKSTQTPSP 59
+++ + C R R+ + E+PPQL P + TEPQ +P+P
Sbjct: 458 AEIQNGCKRNLVLAREREEKEQPPQLSASMPETTATEPQPDDEPAAGVQNGAPSPAP 514
>gi|169214345 PREDICTED: leucine rich repeat containing 68 [Homo
sapiens]
Length = 625
Score = 31.2 bits (69), Expect = 0.19
Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Query: 6 SDVSSECDRE---GRQLQPAERPPQLRPGAPTSLQTEPQDRSPAPMSCDKSTQTPSP 59
+++ + C R R+ + E+PPQL P + TEPQ +P+P
Sbjct: 458 AEIQNGCKRNLVLAREREEKEQPPQLSASMPETTATEPQPDDEPAAGVQNGAPSPAP 514
>gi|169213302 PREDICTED: leucine rich repeat containing 68 [Homo
sapiens]
Length = 625
Score = 31.2 bits (69), Expect = 0.19
Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Query: 6 SDVSSECDRE---GRQLQPAERPPQLRPGAPTSLQTEPQDRSPAPMSCDKSTQTPSP 59
+++ + C R R+ + E+PPQL P + TEPQ +P+P
Sbjct: 458 AEIQNGCKRNLVLAREREEKEQPPQLSASMPETTATEPQPDDEPAAGVQNGAPSPAP 514
>gi|157743257 POU domain, class 6, transcription factor 2 [Homo
sapiens]
Length = 691
Score = 31.2 bits (69), Expect = 0.19
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 10 SECDREGRQLQPAERPPQL--RPGAPTS-LQTEPQDRSPAPMSCDKSTQTPSPPCQA 63
S+ ++ Q P ++PP +P APTS LQ PQ + P S ++ PSP Q+
Sbjct: 213 SQSQQQPLQPTPPQQPPPASQQPPAPTSQLQQAPQPQQHQPHSHSQNQNQPSPTQQS 269
Score = 28.5 bits (62), Expect = 1.2
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Query: 6 SDVSSECDREGRQLQPAERPPQLRPGAPTSLQTEPQDRSPAPMSCDKSTQTPSPPCQ 62
S ++S+ + QLQ ++ Q +P P S PQ AP + P+PP Q
Sbjct: 173 SSLNSQLQQLQLQLQQQQQQQQQQP--PPSTNQHPQPAPQAPSQSQQQPLQPTPPQQ 227
Score = 27.7 bits (60), Expect = 2.1
Identities = 15/55 (27%), Positives = 25/55 (45%)
Query: 3 KQPSDVSSECDREGRQLQPAERPPQLRPGAPTSLQTEPQDRSPAPMSCDKSTQTP 57
+QP S + QLQ A +P Q +P + + Q +P + K +Q+P
Sbjct: 226 QQPPPASQQPPAPTSQLQQAPQPQQHQPHSHSQNQNQPSPTQQSSSPPQKPSQSP 280
Score = 27.3 bits (59), Expect = 2.7
Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Query: 14 REGRQLQP---AERPPQLRPGAPTSLQTEPQDRSPAPMSCDKSTQTPSPPCQ 62
++ +Q QP + PQ P AP+ Q +P +P S Q P+P Q
Sbjct: 190 QQQQQQQPPPSTNQHPQPAPQAPSQSQQQPLQPTPPQQPPPASQQPPAPTSQ 241
>gi|238859653 pleckstrin homology domain containing family A member
4 isoform 2 [Homo sapiens]
Length = 583
Score = 30.8 bits (68), Expect = 0.24
Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Query: 16 GRQLQPAERPPQLRPGAPTSLQTEPQDRSPAPMSCDKSTQTPSPPCQAFNH 66
G Q Q RPP R G P+ RSP S + TQ P PP ++ H
Sbjct: 285 GPQRQTLSRPPTPRRGPPSEAGGGKPPRSPQHWSQEPRTQ-PGPPLESTFH 334
>gi|14327896 cyclin B1 [Homo sapiens]
Length = 433
Score = 30.8 bits (68), Expect = 0.24
Identities = 25/87 (28%), Positives = 36/87 (41%), Gaps = 7/87 (8%)
Query: 23 ERPPQLRPGAPTSLQTEP---QDRSPAPMSCDKSTQTPSPPCQAFNHYLSAM-VVILEDI 78
E P+ P L EP SP+PM CQAF+ + A+ V ED
Sbjct: 102 EPEPEPEPVKEEKLSPEPILVDTASPSPMETSGCAPAEEDLCQAFSDVILAVNDVDAEDG 161
Query: 79 GDLSLCFGFIFTGLDLYGHHHSQDTEQ 105
D +LC ++ D+Y + + EQ
Sbjct: 162 ADPNLCSEYV---KDIYAYLRQLEEEQ 185
>gi|62988361 absent in melanoma 1 [Homo sapiens]
Length = 1723
Score = 30.8 bits (68), Expect = 0.24
Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 4/59 (6%)
Query: 2 AKQPSDVSSECDREGRQ--LQPAERPPQLRPGAPTSLQTEPQDRSPAPMSCDKSTQTPS 58
+KQP SS R+GR L+ PP P AP + P R P P K T S
Sbjct: 95 SKQPPPASSPTKRKGRSRALEAVPAPPASGPRAPA--KESPPKRVPDPSPVTKGTAAES 151
>gi|210147487 akirin 1 isoform 2 [Homo sapiens]
Length = 147
Score = 30.8 bits (68), Expect = 0.24
Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 21 PAERPPQLRPGAPTSLQTEPQD-RSPAPMSCDKSTQTP 57
P RPP P P QT PQ + PAP ++ TP
Sbjct: 36 PGLRPPDAEPPPPFQTQTPPQSLQQPAPPGSERRLPTP 73
>gi|13375791 akirin 1 isoform 1 [Homo sapiens]
Length = 192
Score = 30.8 bits (68), Expect = 0.24
Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 21 PAERPPQLRPGAPTSLQTEPQD-RSPAPMSCDKSTQTP 57
P RPP P P QT PQ + PAP ++ TP
Sbjct: 36 PGLRPPDAEPPPPFQTQTPPQSLQQPAPPGSERRLPTP 73
>gi|209571519 cysteine rich BMP regulator 2 isoform 1 [Homo sapiens]
Length = 1503
Score = 30.4 bits (67), Expect = 0.32
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 10/59 (16%)
Query: 10 SECDREGRQLQPAERPPQLRPGAPTS--LQTEPQDRSPAPMSCDKSTQTPS----PPCQ 62
S+C+ EGR+ +P E +PGA EPQ P + C + Q PS PP Q
Sbjct: 952 SDCEHEGRKYEPGE---SFQPGADPCEVCICEPQPEGPPSLRCHR-RQCPSLVGCPPSQ 1006
>gi|148368962 NKF3 kinase family member [Homo sapiens]
Length = 1746
Score = 30.4 bits (67), Expect = 0.32
Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Query: 4 QPSDVSSECDREGRQLQPAERPPQLRP--GAPTSLQTEPQDRSPAPMSCDKSTQTP 57
QPS + ++ P ++P +P+ L T PQ PAP +ST +P
Sbjct: 824 QPSGEAEAPQTTDSPTTKVQKDPSIKPVTPSPSKLVTSPQSEPPAPFPPPRSTSSP 879
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 30.4 bits (67), Expect = 0.32
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 8/69 (11%)
Query: 3 KQPSDVSSECDREGRQ---LQPAERPPQL----RPGAPTSLQTEPQDRSPAPMSCDKSTQ 55
KQPS + D++ ++ +P+ P + P APT L E SP P++ +Q
Sbjct: 329 KQPSSPYEDKDKDKKEKSATRPSPSPERSSTGPEPPAPTPLLAERHGGSPQPLATTPLSQ 388
Query: 56 TP-SPPCQA 63
P +PP +A
Sbjct: 389 EPVNPPSEA 397
Score = 25.8 bits (55), Expect = 7.8
Identities = 22/74 (29%), Positives = 29/74 (39%), Gaps = 8/74 (10%)
Query: 5 PSDVSSECDREGRQLQP-AERPPQLRPGAPTSLQTEPQDRSPA------PMSCDKSTQTP 57
P+ +R G QP A P P P S + +DRSP P S + P
Sbjct: 364 PAPTPLLAERHGGSPQPLATTPLSQEPVNPPSEASPTRDRSPPKSPEKLPQSSSSESSPP 423
Query: 58 SP-PCQAFNHYLSA 70
SP P + H S+
Sbjct: 424 SPQPTKVSRHASSS 437
>gi|42718017 retinoblastoma binding protein 8 isoform b [Homo
sapiens]
Length = 867
Score = 30.0 bits (66), Expect = 0.41
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
Query: 10 SECDREGRQLQPAERPPQLRPGAPTSLQTEPQDRSPAPMSCDKSTQTPSPPCQAFNHYLS 69
S C E R++ + PQ P L + D+S +PM+ T + +P +FN
Sbjct: 197 SVCANEMRKVSKSSTHPQHNPNENEILVADTYDQSQSPMAKAHGTSSYTPDKSSFN---- 252
Query: 70 AMVVILEDIG 79
V+ E +G
Sbjct: 253 LATVVAETLG 262
>gi|42718015 retinoblastoma binding protein 8 isoform a [Homo
sapiens]
Length = 897
Score = 30.0 bits (66), Expect = 0.41
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
Query: 10 SECDREGRQLQPAERPPQLRPGAPTSLQTEPQDRSPAPMSCDKSTQTPSPPCQAFNHYLS 69
S C E R++ + PQ P L + D+S +PM+ T + +P +FN
Sbjct: 197 SVCANEMRKVSKSSTHPQHNPNENEILVADTYDQSQSPMAKAHGTSSYTPDKSSFN---- 252
Query: 70 AMVVILEDIG 79
V+ E +G
Sbjct: 253 LATVVAETLG 262
>gi|4506441 retinoblastoma binding protein 8 isoform a [Homo
sapiens]
Length = 897
Score = 30.0 bits (66), Expect = 0.41
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
Query: 10 SECDREGRQLQPAERPPQLRPGAPTSLQTEPQDRSPAPMSCDKSTQTPSPPCQAFNHYLS 69
S C E R++ + PQ P L + D+S +PM+ T + +P +FN
Sbjct: 197 SVCANEMRKVSKSSTHPQHNPNENEILVADTYDQSQSPMAKAHGTSSYTPDKSSFN---- 252
Query: 70 AMVVILEDIG 79
V+ E +G
Sbjct: 253 LATVVAETLG 262
>gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3
[Homo sapiens]
Length = 1125
Score = 30.0 bits (66), Expect = 0.41
Identities = 15/45 (33%), Positives = 21/45 (46%)
Query: 13 DREGRQLQPAERPPQLRPGAPTSLQTEPQDRSPAPMSCDKSTQTP 57
DR+GRQ P + Q +P AP Q + Q + P + Q P
Sbjct: 914 DRDGRQQPPQQPQQQPQPQAPQQPQQQQQQQPPPSQQPPPTQQQP 958
>gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2
[Homo sapiens]
Length = 1132
Score = 30.0 bits (66), Expect = 0.41
Identities = 15/45 (33%), Positives = 21/45 (46%)
Query: 13 DREGRQLQPAERPPQLRPGAPTSLQTEPQDRSPAPMSCDKSTQTP 57
DR+GRQ P + Q +P AP Q + Q + P + Q P
Sbjct: 921 DRDGRQQPPQQPQQQPQPQAPQQPQQQQQQQPPPSQQPPPTQQQP 965
>gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1
[Homo sapiens]
Length = 1147
Score = 30.0 bits (66), Expect = 0.41
Identities = 15/45 (33%), Positives = 21/45 (46%)
Query: 13 DREGRQLQPAERPPQLRPGAPTSLQTEPQDRSPAPMSCDKSTQTP 57
DR+GRQ P + Q +P AP Q + Q + P + Q P
Sbjct: 936 DRDGRQQPPQQPQQQPQPQAPQQPQQQQQQQPPPSQQPPPTQQQP 980
>gi|26051231 lactamase, beta isoform a [Homo sapiens]
Length = 547
Score = 30.0 bits (66), Expect = 0.41
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
Query: 17 RQLQPAERPPQLRPGAPTSLQTEPQDRSPAPMSCDKSTQTPSPPC 61
R PA+ P P A + L PQ++S AP S QTP+PPC
Sbjct: 61 RGAAPAQSPAAPDPEA-SPLAEPPQEQSLAPWS----PQTPAPPC 100
>gi|26051233 lactamase, beta isoform b [Homo sapiens]
Length = 373
Score = 30.0 bits (66), Expect = 0.41
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
Query: 17 RQLQPAERPPQLRPGAPTSLQTEPQDRSPAPMSCDKSTQTPSPPC 61
R PA+ P P A + L PQ++S AP S QTP+PPC
Sbjct: 61 RGAAPAQSPAAPDPEA-SPLAEPPQEQSLAPWS----PQTPAPPC 100
>gi|239582735 radial spoke head 4 homolog A isoform 2 [Homo
sapiens]
Length = 600
Score = 29.6 bits (65), Expect = 0.54
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 11 ECDREGRQLQPAERPPQLRPGAPTSLQTEPQDRSPAPMSCDKSTQTPSP 59
E R+ R +P PQ R P P+ SPAP+S + + +PSP
Sbjct: 50 ETGRQSRSSRPWS--PQSRAKTPLGGPAGPETSSPAPVSPREPSSSPSP 96
>gi|58219006 radial spoke head 4 homolog A isoform 1 [Homo
sapiens]
Length = 716
Score = 29.6 bits (65), Expect = 0.54
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Query: 11 ECDREGRQLQPAERPPQLRPGAPTSLQTEPQDRSPAPMSCDKSTQTPSP 59
E R+ R +P PQ R P P+ SPAP+S + + +PSP
Sbjct: 50 ETGRQSRSSRPWS--PQSRAKTPLGGPAGPETSSPAPVSPREPSSSPSP 96
>gi|114431236 zinc finger protein 462 [Homo sapiens]
Length = 2506
Score = 29.6 bits (65), Expect = 0.54
Identities = 18/51 (35%), Positives = 19/51 (37%), Gaps = 7/51 (13%)
Query: 20 QPAERPPQLRPGAPTSLQTE-------PQDRSPAPMSCDKSTQTPSPPCQA 63
QP PP P P LQ P P P + TQ P PP QA
Sbjct: 544 QPPPPPPPPPPSQPQPLQQPQPPQLQPPHQVPPQPQTQPPPTQQPQPPTQA 594
>gi|39930351 dynamin binding protein [Homo sapiens]
Length = 1577
Score = 29.6 bits (65), Expect = 0.54
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 35 SLQTEPQDRSPAPMSCDKSTQTPS 58
S Q +PQD SP P CD+ T + S
Sbjct: 1398 SCQKQPQDASPPPKECDQGTLSAS 1421
>gi|153791350 replication initiator 1 isoform 1 [Homo sapiens]
Length = 567
Score = 29.6 bits (65), Expect = 0.54
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Query: 19 LQPAERPPQLRPGAPTSLQTEPQDRSPAPMSCD 51
L+PA+ PP PGAP +P + P+ SCD
Sbjct: 349 LKPAQEPP---PGAPPEHPQDPIEAPPSLYSCD 378
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.132 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,593,840
Number of Sequences: 37866
Number of extensions: 290679
Number of successful extensions: 2409
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 77
Number of HSP's successfully gapped in prelim test: 186
Number of HSP's that attempted gapping in prelim test: 2106
Number of HSP's gapped (non-prelim): 483
length of query: 112
length of database: 18,247,518
effective HSP length: 82
effective length of query: 30
effective length of database: 15,142,506
effective search space: 454275180
effective search space used: 454275180
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.