BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|45643121 peroxisomal D3,D2-enoyl-CoA isomerase isoform 2 [Homo sapiens] (227 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|45643121 peroxisomal D3,D2-enoyl-CoA isomerase isoform 2 [Hom... 457 e-129 gi|45643119 peroxisomal D3,D2-enoyl-CoA isomerase isoform 1 [Hom... 457 e-129 gi|221307494 chromodomain protein, Y chromosome-like isoform a [... 172 3e-43 gi|221136756 chromodomain protein, Y chromosome-like isoform d [... 172 3e-43 gi|221136753 chromodomain protein, Y chromosome-like isoform d [... 172 3e-43 gi|25453481 Y chromosome chromodomain protein 1, telomeric isofo... 164 4e-41 gi|51538573 chromodomain protein, Y-linked, 1B isoform a [Homo s... 164 4e-41 gi|4757966 Y chromosome chromodomain protein 1, telomeric isofor... 161 4e-40 gi|51538581 chromodomain protein, Y-linked, 1B isoform b [Homo s... 161 4e-40 gi|116235487 chromodomain protein, Y-like 2 [Homo sapiens] 160 1e-39 gi|49355787 Y chromosome chromodomain protein 2B [Homo sapiens] 159 1e-39 gi|4757968 Y chromosome chromodomain protein 2A [Homo sapiens] 159 1e-39 gi|31542718 enoyl Coenzyme A hydratase domain containing 3 [Homo... 64 1e-10 gi|194097323 mitochondrial short-chain enoyl-coenzyme A hydratas... 59 4e-09 gi|70995211 peroxisomal enoyl-coenzyme A hydratase-like protein ... 54 8e-08 gi|4502327 AU RNA binding protein/enoyl-Coenzyme A hydratase pre... 40 0.001 gi|20127408 mitochondrial trifunctional protein, alpha subunit p... 38 0.006 gi|62530384 dodecenoyl-Coenzyme A delta isomerase precursor [Hom... 32 0.34 gi|31377846 WD repeat domain 52 [Homo sapiens] 29 3.8 gi|31543452 PX domain containing serine/threonine kinase [Homo s... 28 4.9 gi|186928852 mitochondrial ribosomal protein S7 [Homo sapiens] 28 6.4 gi|169881275 phosphorylase kinase, alpha 1 (muscle) isoform 2 [H... 28 8.4 gi|169881273 phosphorylase kinase, alpha 1 (muscle) isoform 1 [H... 28 8.4 >gi|45643121 peroxisomal D3,D2-enoyl-CoA isomerase isoform 2 [Homo sapiens] Length = 227 Score = 457 bits (1176), Expect = e-129 Identities = 227/227 (100%), Positives = 227/227 (100%) Query: 1 MYHEIMRALKAASKDDSIITVLTGNGDYYSSGNDLTNFTDIPPGGVEEKAKNNAVLLREF 60 MYHEIMRALKAASKDDSIITVLTGNGDYYSSGNDLTNFTDIPPGGVEEKAKNNAVLLREF Sbjct: 1 MYHEIMRALKAASKDDSIITVLTGNGDYYSSGNDLTNFTDIPPGGVEEKAKNNAVLLREF 60 Query: 61 VGCFIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTF 120 VGCFIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTF Sbjct: 61 VGCFIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTF 120 Query: 121 PKIMSPAKATEMLIFGKKLTAGEACAQGLVTEVFPDSTFQKEVWTRLKAFAKLPPNALRI 180 PKIMSPAKATEMLIFGKKLTAGEACAQGLVTEVFPDSTFQKEVWTRLKAFAKLPPNALRI Sbjct: 121 PKIMSPAKATEMLIFGKKLTAGEACAQGLVTEVFPDSTFQKEVWTRLKAFAKLPPNALRI 180 Query: 181 SKEVIRKREREKLHAVNAEECNVLQGRWLSDECTNAVVNFLSRKSKL 227 SKEVIRKREREKLHAVNAEECNVLQGRWLSDECTNAVVNFLSRKSKL Sbjct: 181 SKEVIRKREREKLHAVNAEECNVLQGRWLSDECTNAVVNFLSRKSKL 227 >gi|45643119 peroxisomal D3,D2-enoyl-CoA isomerase isoform 1 [Homo sapiens] Length = 364 Score = 457 bits (1176), Expect = e-129 Identities = 227/227 (100%), Positives = 227/227 (100%) Query: 1 MYHEIMRALKAASKDDSIITVLTGNGDYYSSGNDLTNFTDIPPGGVEEKAKNNAVLLREF 60 MYHEIMRALKAASKDDSIITVLTGNGDYYSSGNDLTNFTDIPPGGVEEKAKNNAVLLREF Sbjct: 138 MYHEIMRALKAASKDDSIITVLTGNGDYYSSGNDLTNFTDIPPGGVEEKAKNNAVLLREF 197 Query: 61 VGCFIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTF 120 VGCFIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTF Sbjct: 198 VGCFIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTF 257 Query: 121 PKIMSPAKATEMLIFGKKLTAGEACAQGLVTEVFPDSTFQKEVWTRLKAFAKLPPNALRI 180 PKIMSPAKATEMLIFGKKLTAGEACAQGLVTEVFPDSTFQKEVWTRLKAFAKLPPNALRI Sbjct: 258 PKIMSPAKATEMLIFGKKLTAGEACAQGLVTEVFPDSTFQKEVWTRLKAFAKLPPNALRI 317 Query: 181 SKEVIRKREREKLHAVNAEECNVLQGRWLSDECTNAVVNFLSRKSKL 227 SKEVIRKREREKLHAVNAEECNVLQGRWLSDECTNAVVNFLSRKSKL Sbjct: 318 SKEVIRKREREKLHAVNAEECNVLQGRWLSDECTNAVVNFLSRKSKL 364 >gi|221307494 chromodomain protein, Y chromosome-like isoform a [Homo sapiens] Length = 544 Score = 172 bits (435), Expect = 3e-43 Identities = 90/221 (40%), Positives = 131/221 (59%) Query: 4 EIMRALKAASKDDSIITVLTGNGDYYSSGNDLTNFTDIPPGGVEEKAKNNAVLLREFVGC 63 E+ AL A+ DDS + +L+ G + G D F + ++ A +R FV Sbjct: 320 EVQSALSTAAADDSKLVLLSAVGSVFCCGLDFIYFIRRLTDDRKRESTKMAEAIRNFVNT 379 Query: 64 FIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKI 123 FI F KP+I VNGPA+G+ ++L L D V+A+++A F TP++ GQSP+GCS+ FPKI Sbjct: 380 FIQFKKPIIVAVNGPAIGLGASILPLCDVVWANEKAWFQTPYTTFGQSPDGCSTVMFPKI 439 Query: 124 MSPAKATEMLIFGKKLTAGEACAQGLVTEVFPDSTFQKEVWTRLKAFAKLPPNALRISKE 183 M A A EML+ G+KLTA EAC +GLV++VF TF +EV R+K A P L SK Sbjct: 440 MGGASANEMLLSGRKLTAQEACGKGLVSQVFWPGTFTQEVMVRIKELASCNPVVLEESKA 499 Query: 184 VIRKREREKLHAVNAEECNVLQGRWLSDECTNAVVNFLSRK 224 ++R + +L N EC VL+ W S + ++++ +L RK Sbjct: 500 LVRCNMKMELEQANERECEVLKKIWGSAQGMDSMLKYLQRK 540 >gi|221136756 chromodomain protein, Y chromosome-like isoform d [Homo sapiens] Length = 412 Score = 172 bits (435), Expect = 3e-43 Identities = 90/221 (40%), Positives = 131/221 (59%) Query: 4 EIMRALKAASKDDSIITVLTGNGDYYSSGNDLTNFTDIPPGGVEEKAKNNAVLLREFVGC 63 E+ AL A+ DDS + +L+ G + G D F + ++ A +R FV Sbjct: 188 EVQSALSTAAADDSKLVLLSAVGSVFCCGLDFIYFIRRLTDDRKRESTKMAEAIRNFVNT 247 Query: 64 FIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKI 123 FI F KP+I VNGPA+G+ ++L L D V+A+++A F TP++ GQSP+GCS+ FPKI Sbjct: 248 FIQFKKPIIVAVNGPAIGLGASILPLCDVVWANEKAWFQTPYTTFGQSPDGCSTVMFPKI 307 Query: 124 MSPAKATEMLIFGKKLTAGEACAQGLVTEVFPDSTFQKEVWTRLKAFAKLPPNALRISKE 183 M A A EML+ G+KLTA EAC +GLV++VF TF +EV R+K A P L SK Sbjct: 308 MGGASANEMLLSGRKLTAQEACGKGLVSQVFWPGTFTQEVMVRIKELASCNPVVLEESKA 367 Query: 184 VIRKREREKLHAVNAEECNVLQGRWLSDECTNAVVNFLSRK 224 ++R + +L N EC VL+ W S + ++++ +L RK Sbjct: 368 LVRCNMKMELEQANERECEVLKKIWGSAQGMDSMLKYLQRK 408 >gi|221136753 chromodomain protein, Y chromosome-like isoform d [Homo sapiens] Length = 412 Score = 172 bits (435), Expect = 3e-43 Identities = 90/221 (40%), Positives = 131/221 (59%) Query: 4 EIMRALKAASKDDSIITVLTGNGDYYSSGNDLTNFTDIPPGGVEEKAKNNAVLLREFVGC 63 E+ AL A+ DDS + +L+ G + G D F + ++ A +R FV Sbjct: 188 EVQSALSTAAADDSKLVLLSAVGSVFCCGLDFIYFIRRLTDDRKRESTKMAEAIRNFVNT 247 Query: 64 FIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKI 123 FI F KP+I VNGPA+G+ ++L L D V+A+++A F TP++ GQSP+GCS+ FPKI Sbjct: 248 FIQFKKPIIVAVNGPAIGLGASILPLCDVVWANEKAWFQTPYTTFGQSPDGCSTVMFPKI 307 Query: 124 MSPAKATEMLIFGKKLTAGEACAQGLVTEVFPDSTFQKEVWTRLKAFAKLPPNALRISKE 183 M A A EML+ G+KLTA EAC +GLV++VF TF +EV R+K A P L SK Sbjct: 308 MGGASANEMLLSGRKLTAQEACGKGLVSQVFWPGTFTQEVMVRIKELASCNPVVLEESKA 367 Query: 184 VIRKREREKLHAVNAEECNVLQGRWLSDECTNAVVNFLSRK 224 ++R + +L N EC VL+ W S + ++++ +L RK Sbjct: 368 LVRCNMKMELEQANERECEVLKKIWGSAQGMDSMLKYLQRK 408 >gi|25453481 Y chromosome chromodomain protein 1, telomeric isoform a [Homo sapiens] Length = 540 Score = 164 bits (416), Expect = 4e-41 Identities = 86/221 (38%), Positives = 128/221 (57%) Query: 4 EIMRALKAASKDDSIITVLTGNGDYYSSGNDLTNFTDIPPGGVEEKAKNNAVLLREFVGC 63 EI+ AL +A+ DDS + + + G + G D F + ++ FV Sbjct: 316 EIVNALNSAAADDSKLVLFSAAGSVFCCGLDFGYFVKHLRNNRNTASLEMVDTIKNFVNT 375 Query: 64 FIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKI 123 FI F KP++ VNGPA+G+ ++L L D V+A+++A F TP++ GQSP+GCSS TFPK+ Sbjct: 376 FIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKM 435 Query: 124 MSPAKATEMLIFGKKLTAGEACAQGLVTEVFPDSTFQKEVWTRLKAFAKLPPNALRISKE 183 M A A EMLI G+KLTA EACA+GLV++VF TF +EV ++K A P L K Sbjct: 436 MGKASANEMLIAGRKLTAREACAKGLVSQVFLTGTFTQEVMIQIKELASYNPIVLEECKA 495 Query: 184 VIRKREREKLHAVNAEECNVLQGRWLSDECTNAVVNFLSRK 224 ++R + +L N EC VL+ W S + +++ ++ K Sbjct: 496 LVRCNIKLELEQANERECEVLRKIWSSAQGIESMLKYVENK 536 >gi|51538573 chromodomain protein, Y-linked, 1B isoform a [Homo sapiens] Length = 540 Score = 164 bits (416), Expect = 4e-41 Identities = 86/221 (38%), Positives = 128/221 (57%) Query: 4 EIMRALKAASKDDSIITVLTGNGDYYSSGNDLTNFTDIPPGGVEEKAKNNAVLLREFVGC 63 EI+ AL +A+ DDS + + + G + G D F + ++ FV Sbjct: 316 EIVNALNSAAADDSKLVLFSAAGSVFCCGLDFGYFVKHLRNNRNTASLEMVDTIKNFVNT 375 Query: 64 FIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKI 123 FI F KP++ VNGPA+G+ ++L L D V+A+++A F TP++ GQSP+GCSS TFPK+ Sbjct: 376 FIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKM 435 Query: 124 MSPAKATEMLIFGKKLTAGEACAQGLVTEVFPDSTFQKEVWTRLKAFAKLPPNALRISKE 183 M A A EMLI G+KLTA EACA+GLV++VF TF +EV ++K A P L K Sbjct: 436 MGKASANEMLIAGRKLTAREACAKGLVSQVFLTGTFTQEVMIQIKELASYNPIVLEECKA 495 Query: 184 VIRKREREKLHAVNAEECNVLQGRWLSDECTNAVVNFLSRK 224 ++R + +L N EC VL+ W S + +++ ++ K Sbjct: 496 LVRCNIKLELEQANERECEVLRKIWSSAQGIESMLKYVENK 536 >gi|4757966 Y chromosome chromodomain protein 1, telomeric isoform b [Homo sapiens] Length = 554 Score = 161 bits (408), Expect = 4e-40 Identities = 85/207 (41%), Positives = 121/207 (58%) Query: 4 EIMRALKAASKDDSIITVLTGNGDYYSSGNDLTNFTDIPPGGVEEKAKNNAVLLREFVGC 63 EI+ AL +A+ DDS + + + G + G D F + ++ FV Sbjct: 316 EIVNALNSAAADDSKLVLFSAAGSVFCCGLDFGYFVKHLRNNRNTASLEMVDTIKNFVNT 375 Query: 64 FIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKI 123 FI F KP++ VNGPA+G+ ++L L D V+A+++A F TP++ GQSP+GCSS TFPK+ Sbjct: 376 FIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKM 435 Query: 124 MSPAKATEMLIFGKKLTAGEACAQGLVTEVFPDSTFQKEVWTRLKAFAKLPPNALRISKE 183 M A A EMLI G+KLTA EACA+GLV++VF TF +EV ++K A P L K Sbjct: 436 MGKASANEMLIAGRKLTAREACAKGLVSQVFLTGTFTQEVMIQIKELASYNPIVLEECKA 495 Query: 184 VIRKREREKLHAVNAEECNVLQGRWLS 210 ++R + +L N EC VL+ W S Sbjct: 496 LVRCNIKLELEQANERECEVLRKIWSS 522 >gi|51538581 chromodomain protein, Y-linked, 1B isoform b [Homo sapiens] Length = 554 Score = 161 bits (408), Expect = 4e-40 Identities = 85/207 (41%), Positives = 121/207 (58%) Query: 4 EIMRALKAASKDDSIITVLTGNGDYYSSGNDLTNFTDIPPGGVEEKAKNNAVLLREFVGC 63 EI+ AL +A+ DDS + + + G + G D F + ++ FV Sbjct: 316 EIVNALNSAAADDSKLVLFSAAGSVFCCGLDFGYFVKHLRNNRNTASLEMVDTIKNFVNT 375 Query: 64 FIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKI 123 FI F KP++ VNGPA+G+ ++L L D V+A+++A F TP++ GQSP+GCSS TFPK+ Sbjct: 376 FIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKM 435 Query: 124 MSPAKATEMLIFGKKLTAGEACAQGLVTEVFPDSTFQKEVWTRLKAFAKLPPNALRISKE 183 M A A EMLI G+KLTA EACA+GLV++VF TF +EV ++K A P L K Sbjct: 436 MGKASANEMLIAGRKLTAREACAKGLVSQVFLTGTFTQEVMIQIKELASYNPIVLEECKA 495 Query: 184 VIRKREREKLHAVNAEECNVLQGRWLS 210 ++R + +L N EC VL+ W S Sbjct: 496 LVRCNIKLELEQANERECEVLRKIWSS 522 >gi|116235487 chromodomain protein, Y-like 2 [Homo sapiens] Length = 506 Score = 160 bits (404), Expect = 1e-39 Identities = 86/221 (38%), Positives = 134/221 (60%) Query: 4 EIMRALKAASKDDSIITVLTGNGDYYSSGNDLTNFTDIPPGGVEEKAKNNAVLLREFVGC 63 E+ RAL A+ DDS + +L+ G + SG D + +++ A +R+FV Sbjct: 282 EVRRALCNAATDDSKLLLLSAVGSVFCSGLDYSYLIGRLSSDRRKESTRIAEAIRDFVKA 341 Query: 64 FIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKI 123 FI F KP++ +NGPA+G+ ++L L D V+AS++A F TP++ + +P GCSSYTFP+I Sbjct: 342 FIQFKKPIVVAINGPALGLGASILPLCDIVWASEKAWFQTPYATIRLTPAGCSSYTFPQI 401 Query: 124 MSPAKATEMLIFGKKLTAGEACAQGLVTEVFPDSTFQKEVWTRLKAFAKLPPNALRISKE 183 + A A EML G+KLTA EAC++GLV++VF +TF +EV R+K A L SK Sbjct: 402 LGVALANEMLFCGRKLTAQEACSRGLVSQVFWPTTFSQEVMLRVKEMASCSAVVLEESKC 461 Query: 184 VIRKREREKLHAVNAEECNVLQGRWLSDECTNAVVNFLSRK 224 ++R + L VN +EC +L+ W S + +++ ++L K Sbjct: 462 LVRSFLKSVLEDVNEKECLMLKQLWSSSKGLDSLFSYLQDK 502 >gi|49355787 Y chromosome chromodomain protein 2B [Homo sapiens] Length = 541 Score = 159 bits (403), Expect = 1e-39 Identities = 84/221 (38%), Positives = 127/221 (57%) Query: 4 EIMRALKAASKDDSIITVLTGNGDYYSSGNDLTNFTDIPPGGVEEKAKNNAVLLREFVGC 63 E++ AL +A+ DDS + + + G + G D F + ++ FV Sbjct: 317 EMVNALNSAAADDSKLVLFSAAGSVFCCGLDFGYFVRHLRNDRNTASLEMVDTIKNFVNT 376 Query: 64 FIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKI 123 FI F KP++ VNGPA+G+ ++L L D V+A+++A F TP++ GQSP+GCSS TFPK+ Sbjct: 377 FIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKM 436 Query: 124 MSPAKATEMLIFGKKLTAGEACAQGLVTEVFPDSTFQKEVWTRLKAFAKLPPNALRISKE 183 M A A EMLI G+KLTA EACA+GLV++VF TF +EV ++K A L K Sbjct: 437 MGKASANEMLIAGRKLTAREACAKGLVSQVFLTGTFTQEVMIQIKELASYNAIVLEECKA 496 Query: 184 VIRKREREKLHAVNAEECNVLQGRWLSDECTNAVVNFLSRK 224 ++R + +L N EC VL+ W S + +++ ++ K Sbjct: 497 LVRCNIKLELEQANERECEVLRKIWSSAQGIESMLKYVENK 537 >gi|4757968 Y chromosome chromodomain protein 2A [Homo sapiens] Length = 541 Score = 159 bits (403), Expect = 1e-39 Identities = 84/221 (38%), Positives = 127/221 (57%) Query: 4 EIMRALKAASKDDSIITVLTGNGDYYSSGNDLTNFTDIPPGGVEEKAKNNAVLLREFVGC 63 E++ AL +A+ DDS + + + G + G D F + ++ FV Sbjct: 317 EMVNALNSAAADDSKLVLFSAAGSVFCCGLDFGYFVRHLRNDRNTASLEMVDTIKNFVNT 376 Query: 64 FIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKI 123 FI F KP++ VNGPA+G+ ++L L D V+A+++A F TP++ GQSP+GCSS TFPK+ Sbjct: 377 FIQFKKPIVVSVNGPAIGLGASILPLCDLVWANEKAWFQTPYTTFGQSPDGCSSITFPKM 436 Query: 124 MSPAKATEMLIFGKKLTAGEACAQGLVTEVFPDSTFQKEVWTRLKAFAKLPPNALRISKE 183 M A A EMLI G+KLTA EACA+GLV++VF TF +EV ++K A L K Sbjct: 437 MGKASANEMLIAGRKLTAREACAKGLVSQVFLTGTFTQEVMIQIKELASYNAIVLEECKA 496 Query: 184 VIRKREREKLHAVNAEECNVLQGRWLSDECTNAVVNFLSRK 224 ++R + +L N EC VL+ W S + +++ ++ K Sbjct: 497 LVRCNIKLELEQANERECEVLRKIWSSAQGIESMLKYVENK 537 >gi|31542718 enoyl Coenzyme A hydratase domain containing 3 [Homo sapiens] Length = 303 Score = 63.5 bits (153), Expect = 1e-10 Identities = 49/185 (26%), Positives = 87/185 (47%), Gaps = 14/185 (7%) Query: 9 LKAASKDDSIITVLTGNGDYYSSGNDLTNFTDIPPGGVEEKAKNNAVLLREFVGCFI--- 65 L A +D + +++ G +SSG+DL T+ E+ +A + + + Sbjct: 83 LHDADSNDLKVIIISAEGPVFSSGHDLKELTE------EQGRDYHAEVFQTCSKVMMHIR 136 Query: 66 DFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSS--YTFPKI 123 + P P+IA+VNG A L+ D ASD+++F TP ++G CS+ + Sbjct: 137 NHPVPVIAMVNGLATAAGCQLVASCDIAVASDKSSFATPGVNVGLF---CSTPGVALARA 193 Query: 124 MSPAKATEMLIFGKKLTAGEACAQGLVTEVFPDSTFQKEVWTRLKAFAKLPPNALRISKE 183 + A EML G+ ++A EA GL+++V P++ Q+E + A L + + K Sbjct: 194 VPRKVALEMLFTGEPISAQEALLHGLLSKVVPEAELQEETMRIARKIASLSRPVVSLGKA 253 Query: 184 VIRKR 188 K+ Sbjct: 254 TFYKQ 258 >gi|194097323 mitochondrial short-chain enoyl-coenzyme A hydratase 1 precursor [Homo sapiens] Length = 290 Score = 58.5 bits (140), Expect = 4e-09 Identities = 49/222 (22%), Positives = 99/222 (44%), Gaps = 7/222 (3%) Query: 4 EIMRALKAASKDDSI-ITVLTGNGDYYSSGNDLTNFTDIPPGGVEEKAKNNAVLLREFVG 62 E+ +ALK +D ++ VLTG +++G D+ ++ + ++ L+ + Sbjct: 68 ELNQALKTFEEDPAVGAIVLTGGDKAFAAGADIKEMQNL-----SFQDCYSSKFLKHW-D 121 Query: 63 CFIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPK 122 KP+IA VNG A G L + D +YA ++A F P +G P + + Sbjct: 122 HLTQVKKPVIAAVNGYAFGGGCELAMMCDIIYAGEKAQFAQPEILIGTIPGAGGTQRLTR 181 Query: 123 IMSPAKATEMLIFGKKLTAGEACAQGLVTEVFPDSTFQKEVWTRLKAFAKLPPNALRISK 182 + + A EM++ G +++A +A GLV+++ P T +E + A + ++K Sbjct: 182 AVGKSLAMEMVLTGDRISAQDAKQAGLVSKICPVETLVEEAIQCAEKIASNSKIVVAMAK 241 Query: 183 EVIRKREREKLHAVNAEECNVLQGRWLSDECTNAVVNFLSRK 224 E + L + E + + +D+ + F+ ++ Sbjct: 242 ESVNAAFEMTLTEGSKLEKKLFYSTFATDDRKEGMTAFVEKR 283 >gi|70995211 peroxisomal enoyl-coenzyme A hydratase-like protein [Homo sapiens] Length = 328 Score = 54.3 bits (129), Expect = 8e-08 Identities = 50/209 (23%), Positives = 94/209 (44%), Gaps = 15/209 (7%) Query: 2 YHEIMRALKAASKD-DSIITVLTGNGDYYSSGNDLTNFTD--IPPGGVEEKAKNNAVLLR 58 + E++ S+D D V++G G +++G DL + + P G + + LR Sbjct: 86 WREMVECFNKISRDADCRAVVISGAGKMFTAGIDLMDMASDILQPKG--DDVARISWYLR 143 Query: 59 EFVGCFIDF-------PKPLIAVVNGPAVGISVTLLGLFDAVYASDRATFHTPFSHLGQS 111 + + + + PKP+IA V+G +G V L+ D Y + A F +G + Sbjct: 144 DIITRYQETFNVIERCPKPVIAAVHGGCIGGGVDLVTACDIRYCAQDAFFQVKEVDVGLA 203 Query: 112 PEGCSSYTFPKIM-SPAKATEMLIFGKKLTAGEACAQGLVTEVFPDSTFQKEVWTRLKA- 169 + + PK++ + + E+ +K+ A EA GLV+ VFPD + L A Sbjct: 204 ADVGTLQRLPKVIGNQSLVNELAFTARKMMADEALGSGLVSRVFPDKEVMLDAALALAAE 263 Query: 170 FAKLPPNALRISK-EVIRKREREKLHAVN 197 + P A++ +K ++ R+ ++N Sbjct: 264 ISSKSPVAVQSTKVNLLYSRDHSVAESLN 292 >gi|4502327 AU RNA binding protein/enoyl-Coenzyme A hydratase precursor [Homo sapiens] Length = 339 Score = 40.4 bits (93), Expect = 0.001 Identities = 33/136 (24%), Positives = 60/136 (44%), Gaps = 6/136 (4%) Query: 57 LREFVGCFIDFPKPLIAVVNGPAVGISVTLLGLFDAVYASDRATFHTPFSHLGQSPEGCS 116 +R + + P P IA ++G A+G + L D A+ A + L P G Sbjct: 161 IRAVINDIANLPVPTIAAIDGLALGGGLELALACDIRVAASSAKMGLVETKLAIIPGGGG 220 Query: 117 SYTFPKIMSPAKATEMLIFGKKLTAGEACAQGLVTEVFP-----DSTFQKEVWTRLKAFA 171 + P+ + + A E++ + L EA A GL++ V D+ ++K + + F Sbjct: 221 TQRLPRAIGMSLAKELIFSARVLDGKEAKAVGLISHVLEQNQEGDAAYRKAL-DLAREFL 279 Query: 172 KLPPNALRISKEVIRK 187 P A+R++K I + Sbjct: 280 PQGPVAMRVAKLAINQ 295 >gi|20127408 mitochondrial trifunctional protein, alpha subunit precursor [Homo sapiens] Length = 763 Score = 38.1 bits (87), Expect = 0.006 Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 2/87 (2%) Query: 69 KPLIAVVNGPAVG--ISVTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIMSP 126 KP++A +NG +G + V + + + TP LG P + PK++ Sbjct: 135 KPIVAAINGSCLGGGLEVAISCQYRIATKDRKTVLGTPEVLLGALPGAGGTQRLPKMVGV 194 Query: 127 AKATEMLIFGKKLTAGEACAQGLVTEV 153 A +M++ G+ + A A GLV ++ Sbjct: 195 PAALDMMLTGRSIRADRAKKMGLVDQL 221 >gi|62530384 dodecenoyl-Coenzyme A delta isomerase precursor [Homo sapiens] Length = 302 Score = 32.3 bits (72), Expect = 0.34 Identities = 28/125 (22%), Positives = 50/125 (40%), Gaps = 2/125 (1%) Query: 71 LIAVVNG--PAVGISVTLLGLFDAVYASDRATFHTPFSHLGQSPEGCSSYTFPKIMSPAK 128 L++ +NG PA G V L + + + R + LG T + Sbjct: 142 LVSAINGACPAGGCLVALTCDYRILADNPRYCIGLNETQLGIIAPFWLKDTLENTIGHRA 201 Query: 129 ATEMLIFGKKLTAGEACAQGLVTEVFPDSTFQKEVWTRLKAFAKLPPNALRISKEVIRKR 188 A L G EA G+V +V P+ Q + + + +P +A +++K ++RK Sbjct: 202 AERALQLGLLFPPAEALQVGIVDQVVPEEQVQSTALSAIAQWMAIPDHARQLTKAMMRKA 261 Query: 189 EREKL 193 +L Sbjct: 262 TASRL 266 >gi|31377846 WD repeat domain 52 [Homo sapiens] Length = 982 Score = 28.9 bits (63), Expect = 3.8 Identities = 16/58 (27%), Positives = 30/58 (51%) Query: 148 GLVTEVFPDSTFQKEVWTRLKAFAKLPPNALRISKEVIRKREREKLHAVNAEECNVLQ 205 G+ TE P+ + ++ A K + L I+ R+RE++ A+ +E CN+L+ Sbjct: 907 GIETEPIPEDIEDPKAYSIENARRKREHDKLMKEVGEIKARKREQIKALRSEFCNLLE 964 >gi|31543452 PX domain containing serine/threonine kinase [Homo sapiens] Length = 578 Score = 28.5 bits (62), Expect = 4.9 Identities = 30/106 (28%), Positives = 46/106 (43%), Gaps = 21/106 (19%) Query: 105 FSHL------GQSPEGCSSYTFPKIMSPAKATEMLIFGKKLTAGEACAQGLVT------- 151 F HL G+ P+ +FP PA + ++ + + EAC G+ T Sbjct: 338 FGHLLYEMTYGRPPDSVPVDSFP----PAPSMAVVAVLESTLSCEACKNGMPTISRLLQM 393 Query: 152 EVFPDSTFQKEVWTRLKAFAKLPPNALRISKEVIRKR---EREKLH 194 +F D + K KL ALRI+KE I KR E++++H Sbjct: 394 PLFSDVLLTTSEKPQFKIPTKLK-EALRIAKECIEKRLIEEQKQIH 438 >gi|186928852 mitochondrial ribosomal protein S7 [Homo sapiens] Length = 242 Score = 28.1 bits (61), Expect = 6.4 Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 1/65 (1%) Query: 137 KKLTAGEACAQGLVTEVFPDSTFQKEVWTRLKAFAKLPPNALRISK-EVIRKREREKLHA 195 KK +A G + VF D K + K+ +L I E +++++ EK HA Sbjct: 69 KKTQLIKAAPAGKTSSVFEDPVISKFTNMMMIGGNKVLARSLMIQTLEAVKRKQFEKYHA 128 Query: 196 VNAEE 200 +AEE Sbjct: 129 ASAEE 133 >gi|169881275 phosphorylase kinase, alpha 1 (muscle) isoform 2 [Homo sapiens] Length = 1210 Score = 27.7 bits (60), Expect = 8.4 Identities = 16/56 (28%), Positives = 25/56 (44%) Query: 145 CAQGLVTEVFPDSTFQKEVWTRLKAFAKLPPNALRISKEVIRKREREKLHAVNAEE 200 C Q VT + P S QK+ W R ++ L L ++ R+ +K A E+ Sbjct: 24 CHQNPVTGLLPASYDQKDAWVRDNVYSILAVWGLGLAYRKNADRDEDKAKAYELEQ 79 >gi|169881273 phosphorylase kinase, alpha 1 (muscle) isoform 1 [Homo sapiens] Length = 1223 Score = 27.7 bits (60), Expect = 8.4 Identities = 16/56 (28%), Positives = 25/56 (44%) Query: 145 CAQGLVTEVFPDSTFQKEVWTRLKAFAKLPPNALRISKEVIRKREREKLHAVNAEE 200 C Q VT + P S QK+ W R ++ L L ++ R+ +K A E+ Sbjct: 24 CHQNPVTGLLPASYDQKDAWVRDNVYSILAVWGLGLAYRKNADRDEDKAKAYELEQ 79 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.319 0.134 0.397 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 8,854,292 Number of Sequences: 37866 Number of extensions: 384267 Number of successful extensions: 882 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 21 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 856 Number of HSP's gapped (non-prelim): 23 length of query: 227 length of database: 18,247,518 effective HSP length: 99 effective length of query: 128 effective length of database: 14,498,784 effective search space: 1855844352 effective search space used: 1855844352 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.