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Search of human proteins with 131888135
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|131888135 target of myb1-like 2 isoform 3 [Homo sapiens]
(507 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|131888135 target of myb1-like 2 isoform 3 [Homo sapiens] 1001 0.0
gi|75677327 target of myb1-like 2 isoform 1 [Homo sapiens] 870 0.0
gi|4885637 target of myb1 isoform 1 [Homo sapiens] 597 e-171
gi|209180457 target of myb1 isoform 2 [Homo sapiens] 591 e-169
gi|209180448 target of myb1 isoform 3 [Homo sapiens] 533 e-151
gi|209180450 target of myb1 isoform 4 [Homo sapiens] 500 e-141
gi|191252812 target of myb1-like 1 [Homo sapiens] 252 5e-67
gi|20336267 ADP-ribosylation factor binding protein 3 isoform lo... 123 3e-28
gi|9558729 golgi associated, gamma adaptin ear containing, ARF b... 111 2e-24
gi|9558751 ADP-ribosylation factor binding protein 2 [Homo sapiens] 102 1e-21
gi|4507249 signal transducing adaptor molecule 1 [Homo sapiens] 101 2e-21
gi|188219625 signal transducing adaptor molecule 2 [Homo sapiens] 97 5e-20
gi|48527952 golgi associated, gamma adaptin ear containing, ARF ... 94 4e-19
gi|4758528 hepatocyte growth factor-regulated tyrosine kinase su... 87 4e-17
gi|14719400 ADP-ribosylation factor binding protein 3 isoform sh... 80 3e-15
gi|223972704 hypothetical protein LOC284418 [Homo sapiens] 37 0.032
gi|23397666 transcriptional co-repressor Sin3A [Homo sapiens] 37 0.042
gi|223941785 transcriptional co-repressor Sin3A [Homo sapiens] 37 0.042
gi|223941782 transcriptional co-repressor Sin3A [Homo sapiens] 37 0.042
gi|20986497 mitogen-activated protein kinase 7 isoform 1 [Homo s... 37 0.055
gi|209529736 mitogen-activated protein kinase 7 isoform 1 [Homo ... 37 0.055
gi|209529734 mitogen-activated protein kinase 7 isoform 1 [Homo ... 37 0.055
gi|20986499 mitogen-activated protein kinase 7 isoform 2 [Homo s... 37 0.055
gi|206597445 alpha 1 type XVIII collagen isoform 3 precursor [Ho... 36 0.072
gi|110611235 alpha 1 type XVIII collagen isoform 1 precursor [Ho... 36 0.072
gi|32698936 B-cell CLL/lymphoma 9-like [Homo sapiens] 36 0.094
gi|224493912 zinc finger and SCAN domain containing 18 isoform 3... 35 0.16
gi|226371704 zinc finger and SCAN domain containing 18 isoform 3... 35 0.16
gi|224493905 zinc finger and SCAN domain containing 18 isoform 1... 35 0.16
gi|41327691 kinesin-like motor protein C20orf23 [Homo sapiens] 35 0.16
>gi|131888135 target of myb1-like 2 isoform 3 [Homo sapiens]
Length = 507
Score = 1001 bits (2588), Expect = 0.0
Identities = 507/507 (100%), Positives = 507/507 (100%)
Query: 1 MEFLLGNPFSTPVGQCLEKATDGSLQSEDWTLNMEICDIINETEEGPKDAIRALKKRLNG 60
MEFLLGNPFSTPVGQCLEKATDGSLQSEDWTLNMEICDIINETEEGPKDAIRALKKRLNG
Sbjct: 1 MEFLLGNPFSTPVGQCLEKATDGSLQSEDWTLNMEICDIINETEEGPKDAIRALKKRLNG 60
Query: 61 NRNYREVMLALTVLETCVKNCGHRFHILVANRDFIDSVLVKIISPKNNPPTIVQDKVLAL 120
NRNYREVMLALTVLETCVKNCGHRFHILVANRDFIDSVLVKIISPKNNPPTIVQDKVLAL
Sbjct: 61 NRNYREVMLALTVLETCVKNCGHRFHILVANRDFIDSVLVKIISPKNNPPTIVQDKVLAL 120
Query: 121 IQAWADAFRSSPDLTGVVHIYEELKRKGVEFPMADLDALSPIHTPQRSVPEVDPAATMPR 180
IQAWADAFRSSPDLTGVVHIYEELKRKGVEFPMADLDALSPIHTPQRSVPEVDPAATMPR
Sbjct: 121 IQAWADAFRSSPDLTGVVHIYEELKRKGVEFPMADLDALSPIHTPQRSVPEVDPAATMPR 180
Query: 181 SQSQQRTSAGSYSSPPPAPYSAPQAPALSVTGPITANSEQIARLRSELDVVRGNTKVMSE 240
SQSQQRTSAGSYSSPPPAPYSAPQAPALSVTGPITANSEQIARLRSELDVVRGNTKVMSE
Sbjct: 181 SQSQQRTSAGSYSSPPPAPYSAPQAPALSVTGPITANSEQIARLRSELDVVRGNTKVMSE 240
Query: 241 MLTEMVPGQEDSSDLELLQELNRTCRAMQQRIVELISRVSNEEVTEELLHVNDDLNNVFL 300
MLTEMVPGQEDSSDLELLQELNRTCRAMQQRIVELISRVSNEEVTEELLHVNDDLNNVFL
Sbjct: 241 MLTEMVPGQEDSSDLELLQELNRTCRAMQQRIVELISRVSNEEVTEELLHVNDDLNNVFL 300
Query: 301 RYERFERYRSGRSVQNASNGVLNEVTEDNLIDLGPGSPAVVSPMVGNTAPPSSLSSQLAG 360
RYERFERYRSGRSVQNASNGVLNEVTEDNLIDLGPGSPAVVSPMVGNTAPPSSLSSQLAG
Sbjct: 301 RYERFERYRSGRSVQNASNGVLNEVTEDNLIDLGPGSPAVVSPMVGNTAPPSSLSSQLAG 360
Query: 361 LDLGTESVSGTLSSLQQCNPRDGFDMFAQTRGNSLAEQRKTVTYEDPQAVGGLASALDNR 420
LDLGTESVSGTLSSLQQCNPRDGFDMFAQTRGNSLAEQRKTVTYEDPQAVGGLASALDNR
Sbjct: 361 LDLGTESVSGTLSSLQQCNPRDGFDMFAQTRGNSLAEQRKTVTYEDPQAVGGLASALDNR 420
Query: 421 KQSSEGIPVAQPSVMDDIEVWLRTDLKGDDLEEGVTSEEFDKFLEERAKAAEMVPDLPSP 480
KQSSEGIPVAQPSVMDDIEVWLRTDLKGDDLEEGVTSEEFDKFLEERAKAAEMVPDLPSP
Sbjct: 421 KQSSEGIPVAQPSVMDDIEVWLRTDLKGDDLEEGVTSEEFDKFLEERAKAAEMVPDLPSP 480
Query: 481 PMEAPAPASNPSGRKKPERSEDALFAL 507
PMEAPAPASNPSGRKKPERSEDALFAL
Sbjct: 481 PMEAPAPASNPSGRKKPERSEDALFAL 507
>gi|75677327 target of myb1-like 2 isoform 1 [Homo sapiens]
Length = 457
Score = 870 bits (2248), Expect = 0.0
Identities = 452/507 (89%), Positives = 454/507 (89%), Gaps = 50/507 (9%)
Query: 1 MEFLLGNPFSTPVGQCLEKATDGSLQSEDWTLNMEICDIINETEEGPKDAIRALKKRLNG 60
MEFLLGNPFSTPVGQCLEKATDGSLQSEDWTLNMEICDIINETEEGPKDAIRALKKRLNG
Sbjct: 1 MEFLLGNPFSTPVGQCLEKATDGSLQSEDWTLNMEICDIINETEEGPKDAIRALKKRLNG 60
Query: 61 NRNYREVMLALTVLETCVKNCGHRFHILVANRDFIDSVLVKIISPKNNPPTIVQDKVLAL 120
NRNYRE V+
Sbjct: 61 NRNYRE--------------------------------------------------VMLA 70
Query: 121 IQAWADAFRSSPDLTGVVHIYEELKRKGVEFPMADLDALSPIHTPQRSVPEVDPAATMPR 180
+ AWADAFRSSPDLTGVVHIYEELKRKGVEFPMADLDALSPIHTPQRSVPEVDPAATMPR
Sbjct: 71 LTAWADAFRSSPDLTGVVHIYEELKRKGVEFPMADLDALSPIHTPQRSVPEVDPAATMPR 130
Query: 181 SQSQQRTSAGSYSSPPPAPYSAPQAPALSVTGPITANSEQIARLRSELDVVRGNTKVMSE 240
SQSQQRTSAGSYSSPPPAPYSAPQAPALSVTGPITANSEQIARLRSELDVVRGNTKVMSE
Sbjct: 131 SQSQQRTSAGSYSSPPPAPYSAPQAPALSVTGPITANSEQIARLRSELDVVRGNTKVMSE 190
Query: 241 MLTEMVPGQEDSSDLELLQELNRTCRAMQQRIVELISRVSNEEVTEELLHVNDDLNNVFL 300
MLTEMVPGQEDSSDLELLQELNRTCRAMQQRIVELISRVSNEEVTEELLHVNDDLNNVFL
Sbjct: 191 MLTEMVPGQEDSSDLELLQELNRTCRAMQQRIVELISRVSNEEVTEELLHVNDDLNNVFL 250
Query: 301 RYERFERYRSGRSVQNASNGVLNEVTEDNLIDLGPGSPAVVSPMVGNTAPPSSLSSQLAG 360
RYERFERYRSGRSVQNASNGVLNEVTEDNLIDLGPGSPAVVSPMVGNTAPPSSLSSQLAG
Sbjct: 251 RYERFERYRSGRSVQNASNGVLNEVTEDNLIDLGPGSPAVVSPMVGNTAPPSSLSSQLAG 310
Query: 361 LDLGTESVSGTLSSLQQCNPRDGFDMFAQTRGNSLAEQRKTVTYEDPQAVGGLASALDNR 420
LDLGTESVSGTLSSLQQCNPRDGFDMFAQTRGNSLAEQRKTVTYEDPQAVGGLASALDNR
Sbjct: 311 LDLGTESVSGTLSSLQQCNPRDGFDMFAQTRGNSLAEQRKTVTYEDPQAVGGLASALDNR 370
Query: 421 KQSSEGIPVAQPSVMDDIEVWLRTDLKGDDLEEGVTSEEFDKFLEERAKAAEMVPDLPSP 480
KQSSEGIPVAQPSVMDDIEVWLRTDLKGDDLEEGVTSEEFDKFLEERAKAAEMVPDLPSP
Sbjct: 371 KQSSEGIPVAQPSVMDDIEVWLRTDLKGDDLEEGVTSEEFDKFLEERAKAAEMVPDLPSP 430
Query: 481 PMEAPAPASNPSGRKKPERSEDALFAL 507
PMEAPAPASNPSGRKKPERSEDALFAL
Sbjct: 431 PMEAPAPASNPSGRKKPERSEDALFAL 457
>gi|4885637 target of myb1 isoform 1 [Homo sapiens]
Length = 492
Score = 597 bits (1540), Expect = e-171
Identities = 324/514 (63%), Positives = 391/514 (76%), Gaps = 29/514 (5%)
Query: 1 MEFLLGNPFSTPVGQCLEKATDGSLQSEDWTLNMEICDIINETEEGPKDAIRALKKRLNG 60
M+FLLGNPFS+PVGQ +EKATDGSLQSEDW LNMEICDIINETEEGPKDA+RA+KKR+ G
Sbjct: 1 MDFLLGNPFSSPVGQRIEKATDGSLQSEDWALNMEICDIINETEEGPKDALRAVKKRIVG 60
Query: 61 NRNYREVMLALTVLETCVKNCGHRFHILVANRDFIDSVLVKIISPKNNPPTIVQDKVLAL 120
N+N+ EVMLALTVLETCVKNCGHRFH+LVA++DF++SVLV+ I PKNNPPTIV DKVL L
Sbjct: 61 NKNFHEVMLALTVLETCVKNCGHRFHVLVASQDFVESVLVRTILPKNNPPTIVHDKVLNL 120
Query: 121 IQAWADAFRSSPDLTGVVHIYEELKRKGVEFPMADLDALSPIHTPQRSV--PEVDPAATM 178
IQ+WADAFRSSPDLTGVV IYE+L+RKG+EFPM DLD LSPIHTPQR+V E
Sbjct: 121 IQSWADAFRSSPDLTGVVTIYEDLRRKGLEFPMTDLDMLSPIHTPQRTVFNSETQSGQDS 180
Query: 179 PRSQSQQRTSAGSYSSPPPAPYSAPQAPALSVTGPITANSEQIARLRSELDVVRGNTKVM 238
+ S Q+ +G +++P PAP P LS PI EQI +LRSEL++V GN +VM
Sbjct: 181 VGTDSSQQEDSGQHAAPLPAP------PILSGDTPIAPTPEQIGKLRSELEMVSGNVRVM 234
Query: 239 SEMLTEMVPGQEDSSDLELLQELNRTCRAMQQRIVELISRVSNEEVTEELLHVNDDLNNV 298
SEMLTE+VP Q + +DLELLQELNRTCRAMQQR++ELI +++NE++TEELL VND+LNNV
Sbjct: 235 SEMLTELVPTQAEPADLELLQELNRTCRAMQQRVLELIPQIANEQLTEELLIVNDNLNNV 294
Query: 299 FLRYERFERYRSGRSVQNASNGVLNEVTEDNLIDLGPGSPAVVSPMVGNTAPPSSLSSQL 358
FLR+ERFER+R+G++ + S E D LID+GP + A +LSSQL
Sbjct: 295 FLRHERFERFRTGQTTKAPSEA---EPAAD-LIDMGP-----------DPAATGNLSSQL 339
Query: 359 AGLDLGTESVSGTLSSLQQCNP-RDGFDMFAQTRGNSLAEQRKTVTYEDPQAVGGLASAL 417
AG++LG+ SV L SL+ D FDMFA TRG+SLA+QRK V YE PQA GLA AL
Sbjct: 340 AGMNLGSSSVRAGLQSLEASGRLEDEFDMFALTRGSSLADQRKEVKYEAPQATDGLAGAL 399
Query: 418 DNRKQSSEGIPVAQPSVMDDIEVWLRTDLKGDDLEE--GVTSEEFDKFLEERAKAAEMVP 475
D R+QS+ IPV Q +M+DIE WL TD+ G+D EE GVTSEEFDKFLEERAKAA+ +P
Sbjct: 400 DARQQSTGAIPVTQACLMEDIEQWLSTDV-GNDAEEPKGVTSEEFDKFLEERAKAADRLP 458
Query: 476 DLPSPPMEA-PAPASNPSGRKK-PERSEDALFAL 507
+L SP E P P S P+ RKK E+ +D LFAL
Sbjct: 459 NLSSPSAEGPPGPPSGPAPRKKTQEKDDDMLFAL 492
>gi|209180457 target of myb1 isoform 2 [Homo sapiens]
Length = 493
Score = 591 bits (1524), Expect = e-169
Identities = 323/515 (62%), Positives = 391/515 (75%), Gaps = 30/515 (5%)
Query: 1 MEFLLGNPFSTPVGQCLEKATDGSLQSEDWTLNMEICDIINETEEGPKDAIRALKKRLNG 60
M+FLLGNPFS+PVGQ +EKATDGSLQSEDW LNMEICDIINETEEGPKDA+RA+KKR+ G
Sbjct: 1 MDFLLGNPFSSPVGQRIEKATDGSLQSEDWALNMEICDIINETEEGPKDALRAVKKRIVG 60
Query: 61 NRNYREVMLALTVLETCVKNCGHRFHILVANRDFIDSVLVKIISPKNNPPTIVQDKVLAL 120
N+N+ EVMLALTVLETCVKNCGHRFH+LVA++DF++SVLV+ I PKNNPPTIV DKVL L
Sbjct: 61 NKNFHEVMLALTVLETCVKNCGHRFHVLVASQDFVESVLVRTILPKNNPPTIVHDKVLNL 120
Query: 121 IQAWADAFRSSPDLTGVVHIYEELKRKGVEFPMADLDALSPIHTPQRSV--PEVDPAATM 178
IQ+WADAFRSSPDLTGVV IYE+L+RKG+EFPM DLD LSPIHTPQR+V E
Sbjct: 121 IQSWADAFRSSPDLTGVVTIYEDLRRKGLEFPMTDLDMLSPIHTPQRTVFNSETQSGQDS 180
Query: 179 PRSQSQQRTSAGSYSSPPPAPYSAPQAPALSVTGPITANSEQIARLRSELDVVRGNTKVM 238
+ S Q+ +G +++P PAP P LS PI EQI +LRSEL++V GN +VM
Sbjct: 181 VGTDSSQQEDSGQHAAPLPAP------PILSGDTPIAPTPEQIGKLRSELEMVSGNVRVM 234
Query: 239 SEMLTEMVPGQEDSSDLELLQELNRTCRAMQQRIVELISRVSNEEVTEELLHVNDDLNNV 298
SEMLTE+VP Q + +DLELLQELNRTCRAMQQR++ELI +++NE++TEELL VND+LNNV
Sbjct: 235 SEMLTELVPTQAEPADLELLQELNRTCRAMQQRVLELIPQIANEQLTEELLIVNDNLNNV 294
Query: 299 FLRYERFERYRSGRSVQNASNGVLNEVTEDNLIDLGPGSPAVVSPMVGNTAPPSSLSSQL 358
FLR+ERFER+R+G++ + S E D LID+GP + A +LSSQL
Sbjct: 295 FLRHERFERFRTGQTTKAPSEA---EPAAD-LIDMGP-----------DPAATGNLSSQL 339
Query: 359 AGLDLGTESVSGTLSSLQQCNP-RDGFDMFAQTRGNSLAEQRKTVTYEDPQAVGGLASAL 417
AG++LG+ SV L SL+ D FDMFA TRG+SLA+QRK V YE PQA GLA AL
Sbjct: 340 AGMNLGSSSVRAGLQSLEASGRLEDEFDMFALTRGSSLADQRKEVKYEAPQATDGLAGAL 399
Query: 418 DNRKQSSEGIPVAQPSVMDDIEVWLRTDLKGDDLEE--GVTSE-EFDKFLEERAKAAEMV 474
D R+QS+ IPV Q +M+DIE WL TD+ G+D EE GVTSE +FDKFLEERAKAA+ +
Sbjct: 400 DARQQSTGAIPVTQACLMEDIEQWLSTDV-GNDAEEPKGVTSEGKFDKFLEERAKAADRL 458
Query: 475 PDLPSPPMEA-PAPASNPSGRKK-PERSEDALFAL 507
P+L SP E P P S P+ RKK E+ +D LFAL
Sbjct: 459 PNLSSPSAEGPPGPPSGPAPRKKTQEKDDDMLFAL 493
>gi|209180448 target of myb1 isoform 3 [Homo sapiens]
Length = 460
Score = 533 bits (1372), Expect = e-151
Identities = 295/482 (61%), Positives = 360/482 (74%), Gaps = 30/482 (6%)
Query: 34 MEICDIINETEEGPKDAIRALKKRLNGNRNYREVMLALTVLETCVKNCGHRFHILVANRD 93
MEICDIINETEEGPKDA+RA+KKR+ GN+N+ EVMLALTVLETCVKNCGHRFH+LVA++D
Sbjct: 1 MEICDIINETEEGPKDALRAVKKRIVGNKNFHEVMLALTVLETCVKNCGHRFHVLVASQD 60
Query: 94 FIDSVLVKIISPKNNPPTIVQDKVLALIQAWADAFRSSPDLTGVVHIYEELKRKGVEFPM 153
F++SVLV+ I PKNNPPTIV DKVL LIQ+WADAFRSSPDLTGVV IYE+L+RKG+EFPM
Sbjct: 61 FVESVLVRTILPKNNPPTIVHDKVLNLIQSWADAFRSSPDLTGVVTIYEDLRRKGLEFPM 120
Query: 154 ADLDALSPIHTPQRSV--PEVDPAATMPRSQSQQRTSAGSYSSPPPAPYSAPQAPALSVT 211
DLD LSPIHTPQR+V E + S Q+ +G +++P PAP P LS
Sbjct: 121 TDLDMLSPIHTPQRTVFNSETQSGQDSVGTDSSQQEDSGQHAAPLPAP------PILSGD 174
Query: 212 GPITANSEQIARLRSELDVVRGNTKVMSEMLTEMVPGQEDSSDLELLQELNRTCRAMQQR 271
PI EQI +LRSEL++V GN +VMSEMLTE+VP Q + +DLELLQELNRTCRAMQQR
Sbjct: 175 TPIAPTPEQIGKLRSELEMVSGNVRVMSEMLTELVPTQAEPADLELLQELNRTCRAMQQR 234
Query: 272 IVELISRVSNEEVTEELLHVNDDLNNVFLRYERFERYRSGRSVQNASNGVLNEVTEDNLI 331
++ELI +++NE++TEELL VND+LNNVFLR+ERFER+R+G++ + S E D LI
Sbjct: 235 VLELIPQIANEQLTEELLIVNDNLNNVFLRHERFERFRTGQTTKAPSEA---EPAAD-LI 290
Query: 332 DLGPGSPAVVSPMVGNTAPPSSLSSQLAGLDLGTESVSGTLSSLQQCNP-RDGFDMFAQT 390
D+GP + A +LSSQLAG++LG+ SV L SL+ D FDMFA T
Sbjct: 291 DMGP-----------DPAATGNLSSQLAGMNLGSSSVRAGLQSLEASGRLEDEFDMFALT 339
Query: 391 RGNSLAEQRKTVTYEDPQAVGGLASALDNRKQSSEGIPVAQPSVMDDIEVWLRTDLKGDD 450
RG+SLA+QRK V YE PQA GLA ALD R+QS+ IPV Q +M+DIE WL TD+ G+D
Sbjct: 340 RGSSLADQRKEVKYEAPQATDGLAGALDARQQSTGAIPVTQACLMEDIEQWLSTDV-GND 398
Query: 451 LEE--GVTSE-EFDKFLEERAKAAEMVPDLPSPPMEA-PAPASNPSGRKK-PERSEDALF 505
EE GVTSE +FDKFLEERAKAA+ +P+L SP E P P S P+ RKK E+ +D LF
Sbjct: 399 AEEPKGVTSEGKFDKFLEERAKAADRLPNLSSPSAEGPPGPPSGPAPRKKTQEKDDDMLF 458
Query: 506 AL 507
AL
Sbjct: 459 AL 460
>gi|209180450 target of myb1 isoform 4 [Homo sapiens]
Length = 447
Score = 500 bits (1288), Expect = e-141
Identities = 287/513 (55%), Positives = 351/513 (68%), Gaps = 72/513 (14%)
Query: 1 MEFLLGNPFSTPVGQCLEKATDGSLQSEDWTLNMEICDIINETEEGPKDAIRALKKRLNG 60
M+FLLGNPFS+PVGQ +EKATDGSLQSEDW LNMEICDIINETEEGPKDA+RA+KKR+ G
Sbjct: 1 MDFLLGNPFSSPVGQRIEKATDGSLQSEDWALNMEICDIINETEEGPKDALRAVKKRIVG 60
Query: 61 NRNYREVMLALTVLETCVKNCGHRFHILVANRDFIDSVLVKIISPKNNPPTIVQDKVLAL 120
N+N+ EVMLALTVLETCVKNCGHRFH+LVA++DF++SVLV+ I PKNNPPTIV DKVL L
Sbjct: 61 NKNFHEVMLALTVLETCVKNCGHRFHVLVASQDFVESVLVRTILPKNNPPTIVHDKVLNL 120
Query: 121 IQA-WADAFRSSPDLTGVVHIYEELKRKGVEFPMADLDALSPIHTPQRSVPEVDPAATMP 179
IQ + +S D G
Sbjct: 121 IQTVFNSETQSGQDSVG------------------------------------------- 137
Query: 180 RSQSQQRTSAGSYSSPPPAPYSAPQAPALSVTGPITANSEQIARLRSELDVVRGNTKVMS 239
+ S Q+ +G +++P PAP P LS PI EQI +LRSEL++V GN +VMS
Sbjct: 138 -TDSSQQEDSGQHAAPLPAP------PILSGDTPIAPTPEQIGKLRSELEMVSGNVRVMS 190
Query: 240 EMLTEMVPGQEDSSDLELLQELNRTCRAMQQRIVELISRVSNEEVTEELLHVNDDLNNVF 299
EMLTE+VP Q + +DLELLQELNRTCRAMQQR++ELI +++NE++TEELL VND+LNNVF
Sbjct: 191 EMLTELVPTQAEPADLELLQELNRTCRAMQQRVLELIPQIANEQLTEELLIVNDNLNNVF 250
Query: 300 LRYERFERYRSGRSVQNASNGVLNEVTEDNLIDLGPGSPAVVSPMVGNTAPPSSLSSQLA 359
LR+ERFER+R+G++ + S E D LID+GP + A +LSSQLA
Sbjct: 251 LRHERFERFRTGQTTKAPSEA---EPAAD-LIDMGP-----------DPAATGNLSSQLA 295
Query: 360 GLDLGTESVSGTLSSLQQCNP-RDGFDMFAQTRGNSLAEQRKTVTYEDPQAVGGLASALD 418
G++LG+ SV L SL+ D FDMFA TRG+SLA+QRK V YE PQA GLA ALD
Sbjct: 296 GMNLGSSSVRAGLQSLEASGRLEDEFDMFALTRGSSLADQRKEVKYEAPQATDGLAGALD 355
Query: 419 NRKQSSEGIPVAQPSVMDDIEVWLRTDLKGDDLEE--GVTSEEFDKFLEERAKAAEMVPD 476
R+QS+ IPV Q +M+DIE WL TD+ G+D EE GVTSEEFDKFLEERAKAA+ +P+
Sbjct: 356 ARQQSTGAIPVTQACLMEDIEQWLSTDV-GNDAEEPKGVTSEEFDKFLEERAKAADRLPN 414
Query: 477 LPSPPMEA-PAPASNPSGRKK-PERSEDALFAL 507
L SP E P P S P+ RKK E+ +D LFAL
Sbjct: 415 LSSPSAEGPPGPPSGPAPRKKTQEKDDDMLFAL 447
>gi|191252812 target of myb1-like 1 [Homo sapiens]
Length = 476
Score = 252 bits (644), Expect = 5e-67
Identities = 146/386 (37%), Positives = 223/386 (57%), Gaps = 41/386 (10%)
Query: 7 NPFSTPVGQCLEKATDGSLQSEDWTLNMEICDIINETEEGPKDAIRALKKRLNGNRNYRE 66
+P++T VG +EKAT +Q+EDW M ICDIIN T++GPKDA++ALKKR++ N N++E
Sbjct: 9 DPYATSVGHLIEKATFAGVQTEDWGQFMHICDIINTTQDGPKDAVKALKKRISKNYNHKE 68
Query: 67 VMLALTVLETCVKNCGHRFHILVANRDFIDSVLVKIISPKNNPPTIVQDKVLALIQAWAD 126
+ L L++++ CV+NCG F L+ ++F+ LVK+++P+ N P +Q+++L I+ W+
Sbjct: 69 IQLTLSLIDMCVQNCGPSFQSLIVKKEFVKENLVKLLNPRYNLPLDIQNRILNFIKTWSQ 128
Query: 127 AFRSSPDLTGVVHIYEELKRKGVEFPMADLDALSPIHTPQRSVPEVDPAATMPRSQSQQR 186
F D++ V +Y +L +KGV+FP ++ +A R
Sbjct: 129 GFPGGVDVSEVKEVYLDLVKKGVQFPPSEAEA------------------------ETAR 164
Query: 187 TSAGSYSSPPPAPYSAPQAPAL-SVTGP----ITANSEQIARLRSELDVVRGNTKVMSEM 241
SS PP S P APAL SV P +T EQI +L SELD+V+ N +VMS +
Sbjct: 165 QETAQISSNPPT--SVPTAPALSSVIAPKNSTVTLVPEQIGKLHSELDMVKMNVRVMSAI 222
Query: 242 LTEMVPGQEDSSDLELLQELNRTCRAMQQRIVELISRVSNEEVTEELLHVNDDLNNVFLR 301
L E PG E+ D+ELLQ+L +T R MQ+RI++L+ V NE+VT EL+ VN+DLNN L
Sbjct: 223 LMENTPGSENHEDIELLQKLYKTGREMQERIMDLLVVVENEDVTVELIQVNEDLNNAILG 282
Query: 302 YERFERYRSGRSVQNASNGVLNEVTED------NLIDLGPGSPAVVSPMVGNTAPPSSLS 355
YERF R + QN + T + +L+DL P SP + +G ++++
Sbjct: 283 YERFTRNQQRILEQNKNQKEATNTTSEPSAPSQDLLDLSP-SPRMPRATLGEL---NTMN 338
Query: 356 SQLAGLDLGTESVSGTLSSLQQCNPR 381
+QL+GL+ S T + +P+
Sbjct: 339 NQLSGLNFSLPSSDVTNNLKPSLHPQ 364
>gi|20336267 ADP-ribosylation factor binding protein 3 isoform long
[Homo sapiens]
Length = 723
Score = 123 bits (309), Expect = 3e-28
Identities = 109/393 (27%), Positives = 179/393 (45%), Gaps = 45/393 (11%)
Query: 17 LEKATDGSLQSEDWTLNMEICDIINETEEGPKDAIRALKKRLNGNRNYREVMLALTVLET 76
L KAT+ S + EDW + CD IN+ EGP+ A+R L ++ + + E + ALTVLE
Sbjct: 13 LNKATNPSNRQEDWEYIIGFCDQINKELEGPQIAVRLLAHKIQSPQEW-EALQALTVLEA 71
Query: 77 CVKNCGHRFHILVANRDFIDSVLVKIISPK---NNPPTIVQDKVLALIQAWADAFRSSPD 133
C+KNCG RFH V F++ L+K++SPK + V+ KV+ L+ +W A P+
Sbjct: 72 CMKNCGRRFHNEVGKFRFLNE-LIKVVSPKYLGDRVSEKVKTKVIELLYSWTMAL---PE 127
Query: 134 LTGVVHIYEELKRKGVEFPMADLDALSPIHTPQRSVPEVDPAATMPRSQSQQRTS--AGS 191
+ Y LKR+G+ + + PI + +P P P ++++ A
Sbjct: 128 EAKIKDAYHMLKRQGI------VQSDPPIPVDRTLIPSPPPRPKNPVFDDEEKSKLLAKL 181
Query: 192 YSSPPPAPYSAPQAPALSVTGPITANSEQIARLRSELDVVRGNTKVMSEMLTEMVPGQED 251
S P S+ A +++ + L+ V N +++SEML QED
Sbjct: 182 LKSKNPDDLQEANKLIKSMVKEDEARIQKVTKRLHTLEEVNNNVRLLSEMLLHY--SQED 239
Query: 252 SS--DLELLQELNRTCRAMQQRIVELISRV-SNEEVTEELLHVNDDLNNVFLRYERFERY 308
SS D EL++EL C ++ + +L S N+ ++L +D+L+ V Y+
Sbjct: 240 SSDGDRELMKELFDQCENKRRTLFKLASETEDNDNSLGDILQASDNLSRVINSYKTIIEG 299
Query: 309 R-------------SGRSVQNASNGVLNEVTE-------DNLIDLGPGSPA----VVSPM 344
+ S + Q ++ G L ++ E +++ P P+ ++ P
Sbjct: 300 QVINGEVATLTLPDSEGNSQCSNQGTLIDLAELDTTNSLSSVLAPAPTPPSSGIPILPPP 359
Query: 345 VGNTAPPSSLSSQLAGLDLGTESVSGTLSSLQQ 377
+ PP S SS A LG S S LS L +
Sbjct: 360 PQASGPPRSRSSSQAEATLGPSSTSNALSWLDE 392
>gi|9558729 golgi associated, gamma adaptin ear containing, ARF
binding protein 1 isoform 1 [Homo sapiens]
Length = 639
Score = 111 bits (277), Expect = 2e-24
Identities = 109/442 (24%), Positives = 195/442 (44%), Gaps = 34/442 (7%)
Query: 17 LEKATDGSLQSEDWTLNMEICDIINETEEGPKDAIRALKKRLNGNRNYREVMLALTVLET 76
+ +AT+ + DW C+ +NE EGP A R L ++ + + E + ALTVLET
Sbjct: 14 INRATNPLNKELDWASINGFCEQLNEDFEGPPLATRLLAHKIQSPQEW-EAIQALTVLET 72
Query: 77 CVKNCGHRFHILVANRDFIDSVLVKIISPK---NNPPTIVQDKVLALIQAWADAFRSSPD 133
C+K+CG RFH V F++ L+K++SPK + V++K+L L+ +W P+
Sbjct: 73 CMKSCGKRFHDEVGKFRFLNE-LIKVVSPKYLGSRTSEKVKNKILELLYSWTVGL---PE 128
Query: 134 LTGVVHIYEELKRKGV--EFPMADLDALSPIHTPQRSVPEVDPAATMPRSQSQQRTSAGS 191
+ Y+ LK++G+ P D P+ P+ P + + + + A
Sbjct: 129 EVKIAEAYQMLKKQGIVKSDPKLPDDTTFPLPPPR-------PKNVIFEDEEKSKMLARL 181
Query: 192 YSSPPPAPYSAPQAPALSVTGPITANSEQIARLRSELDVVRGNTKVMSEM-LTEMVPGQE 250
S P A + E+I++ + ++ V N K+++EM ++ G
Sbjct: 182 LKSSHPEDLRAANKLIKEMVQEDQKRMEKISKRVNAIEEVNNNVKLLTEMVMSHSQGGAA 241
Query: 251 DSSDLELLQELNRTCRAMQQRIVELISRV-SNEEVTEELLHVNDDLNNVFLRYERFERYR 309
S +L++EL + C M+ + L S N+E E+L ND+L V Y++ R
Sbjct: 242 AGSSEDLMKELYQRCERMRPTLFRLASDTEDNDEALAEILQANDNLTQVINLYKQLVRGE 301
Query: 310 --SGRSVQNASNGVLNEVTEDNLIDLGPGSPA--VVSPMVGNTAPPSSLSSQLAGLDLGT 365
+G + + G + + + + +DL P + G A P S+ ++ LD
Sbjct: 302 EVNGDATAGSIPGSTSALLDLSGLDLPPAGTTYPAMPTRPGEQASPEQPSASVSLLDDEL 361
Query: 366 ESVSGTLSSLQQCNPRDGFDMFAQTRGNSLAEQRKTVTYEDPQAVGGLASALDNRKQSSE 425
S+ L P G + T NS T E P A ++++R +
Sbjct: 362 MSL-----GLSDPTPPSGPSLDG-TGWNSFQSSDAT---EPPAPALAQAPSMESRPPAQT 412
Query: 426 GIPVAQPSVMDDIEVWLRTDLK 447
+P + S +DD+++ +T L+
Sbjct: 413 SLPAS--SGLDDLDLLGKTLLQ 432
>gi|9558751 ADP-ribosylation factor binding protein 2 [Homo sapiens]
Length = 613
Score = 102 bits (253), Expect = 1e-21
Identities = 95/384 (24%), Positives = 169/384 (44%), Gaps = 36/384 (9%)
Query: 17 LEKATDGSLQSEDWTLNMEICDIINETEEGPKDAIRALKKRLNGNRNYREVMLALTVLET 76
L KATD S+ +DW+ C+ +N GP A L ++ + +E + ALTVLE
Sbjct: 30 LNKATDPSMSEQDWSAIQNFCEQVNTDPNGPTHAPWLLAHKIQSPQE-KEALYALTVLEM 88
Query: 77 CVKNCGHRFHILVANRDFIDSVLVKIISPK---NNPPTIVQDKVLALIQAWADAFRSSPD 133
C+ +CG +FH VA F++ L+K++SPK + V+ +V+ ++ +W F P+
Sbjct: 89 CMNHCGEKFHSEVAKFRFLNE-LIKVLSPKYLGSWATGKVKGRVIEILFSWTVWF---PE 144
Query: 134 LTGVVHIYEELKRKGV--EFPMADLDALSPIHT--PQRSVPEVDPAATMPRSQSQQRTSA 189
+ Y+ LK++G+ + P +D + P + P+ S+ + D + + +
Sbjct: 145 DIKIRDAYQMLKKQGIIKQDPKLPVDKILPPPSPWPKSSIFDAD--------EEKSKLLT 196
Query: 190 GSYSSPPPAPYSAPQAPALSVTGPITANSEQIARLRSELDVVRGNTKVMSEMLTEMVPGQ 249
S P A ++ SE++++ S ++ VR + KV+ EML+
Sbjct: 197 RLLKSNHPEDLQAANRLIKNLVKEEQEKSEKVSKRVSAVEEVRSHVKVLQEMLSMYRRPG 256
Query: 250 EDSSDLELLQELNRTCRAMQQRIVELIS-RVSNEEVTEELLHVNDDLNNVFLRYERFERY 308
+ D E LQ + C ++ + L S +++ E+L ND L L Y++
Sbjct: 257 QAPPDQEALQVVYERCEKLRPTLFRLASDTTDDDDALAEILQANDLLTQGVLLYKQVMEG 316
Query: 309 R---SGRSVQNASNGVLNEVTED--------NLIDLGPGSPAVVSPMVGNTAPPSSLSSQ 357
R R + + ++ V ++ LIDL + P T PS L
Sbjct: 317 RVTFGNRVTSSLGDIPVSRVFQNPAGCMKTCPLIDLEVDN----GPAQMGTVVPSLLHQD 372
Query: 358 LAGLDLGTESVSGTLSSLQQCNPR 381
LA L + V+G +S C +
Sbjct: 373 LAALGISDAPVTGMVSGQNCCEEK 396
>gi|4507249 signal transducing adaptor molecule 1 [Homo sapiens]
Length = 540
Score = 101 bits (251), Expect = 2e-21
Identities = 69/244 (28%), Positives = 114/244 (46%), Gaps = 7/244 (2%)
Query: 10 STPVGQCLEKATDGSLQSEDWTLNMEICDIINETEEGPKDAIRALKKRLNGNRNYREVML 69
+ P Q +EKAT +EDW L ++ICD + ++ GPKD +R++ +R+N +++ M
Sbjct: 6 TNPFDQDVEKATSEMNTAEDWGLILDICDKVGQSRTGPKDCLRSIMRRVN-HKDPHVAMQ 64
Query: 70 ALTVLETCVKNCGHRFHILVANRDFIDSVLVKIISPKNNPPTIVQDKVLALIQAWADAFR 129
ALT+L CV NCG FH+ V +RDF V + K +P V +K+ AL+ W D F+
Sbjct: 65 ALTLLGACVSNCGKIFHLEVCSRDFASE--VSNVLNKGHPK--VCEKLKALMVEWTDEFK 120
Query: 130 SSPDLTGVVHIYEELKRKGVEFPMADLDALSPIHTPQRSVPEVDPAATMPRSQSQQRTSA 189
+ P L+ + + + LK +GV FP A V + DP + + + A
Sbjct: 121 NDPQLSLISAMIKNLKEQGVTFPAIGSQAAEQAKASPALVAK-DPGTVANKKEEEDLAKA 179
Query: 190 GSYSSPPPAPYSAPQAPALSVTGPITANSEQIAR-LRSELDVVRGNTKVMSEMLTEMVPG 248
S S + T + N + R +R+ D ++ E++
Sbjct: 180 IELSLKEQRQQSTTLSTLYPSTSSLLTNHQHEGRKVRAIYDFEAAEDNELTFKAGEIITV 239
Query: 249 QEDS 252
+DS
Sbjct: 240 LDDS 243
Score = 30.0 bits (66), Expect = 5.2
Identities = 31/129 (24%), Positives = 52/129 (40%), Gaps = 25/129 (19%)
Query: 94 FIDSVLVKIISPKNNPPTIVQDKVLALIQAW--ADAFRSSPDLTGVVHI----------- 140
F D V V+ I P+ P I +DK+ L+Q D PDL ++H+
Sbjct: 284 FSDDVQVETIEPEPEPAFIDEDKMDQLLQMLQSTDPSDDQPDLPELLHLEAMCHQMGPLI 343
Query: 141 ---YEELKRKGVEFPMADLDALSPIHTPQRSVPEVDPAATMPRS--------QSQQRTSA 189
E++ RK E ++ + + + + E DP +M QS + +
Sbjct: 344 DEKLEDIDRKHSELSELNVKVMEALSLYTKLMNE-DPMYSMYAKLQNQPYYMQSSGVSGS 402
Query: 190 GSYSSPPPA 198
Y+ PPP+
Sbjct: 403 QVYAGPPPS 411
>gi|188219625 signal transducing adaptor molecule 2 [Homo sapiens]
Length = 525
Score = 96.7 bits (239), Expect = 5e-20
Identities = 56/160 (35%), Positives = 86/160 (53%), Gaps = 8/160 (5%)
Query: 1 MEFLLGNPFSTPVGQCLEKATDGSLQSEDWTLNMEICDIINETEEGPKDAIRALKKRLNG 60
M NPF Q +EKAT+ +EDW+L M+ICD + T G KD ++A+ KR+N
Sbjct: 1 MPLFTANPFE----QDVEKATNEYNTTEDWSLIMDICDKVGSTPNGAKDCLKAIMKRVN- 55
Query: 61 NRNYREVMLALTVLETCVKNCGHRFHILVANRDFIDSVLVKIISPKNNPPTIVQDKVLAL 120
++ + ALT+L CV NCG FH+ V +RDF V I KN V +K+ +L
Sbjct: 56 HKVPHVALQALTLLGACVANCGKIFHLEVCSRDFATEVRAVI---KNKAHPKVCEKLKSL 112
Query: 121 IQAWADAFRSSPDLTGVVHIYEELKRKGVEFPMADLDALS 160
+ W++ F+ P + + + +K +G+ FP A +S
Sbjct: 113 MVEWSEEFQKDPQFSLISATIKSMKEEGITFPPAGSQTVS 152
>gi|48527952 golgi associated, gamma adaptin ear containing, ARF
binding protein 1 isoform 2 [Homo sapiens]
Length = 552
Score = 93.6 bits (231), Expect = 4e-19
Identities = 74/283 (26%), Positives = 132/283 (46%), Gaps = 21/283 (7%)
Query: 17 LEKATDGSLQSEDWTLNMEICDIINETEEGPKDAIRALKKRLNGNRNYREVMLALTVLET 76
+ +AT+ + DW C+ +NE EGP A R L ++ + + E + ALTVLET
Sbjct: 14 INRATNPLNKELDWASINGFCEQLNEDFEGPPLATRLLAHKIQSPQEW-EAIQALTVLET 72
Query: 77 CVKNCGHRFHILVANRDFIDSVLVKIISPK---NNPPTIVQDKVLALIQAWADAFRSSPD 133
C+K+CG RFH V F++ L+K++SPK + V++K+L L+ +W P+
Sbjct: 73 CMKSCGKRFHDEVGKFRFLNE-LIKVVSPKYLGSRTSEKVKNKILELLYSWTVGL---PE 128
Query: 134 LTGVVHIYEELKRKGV--EFPMADLDALSPIHTPQRSVPEVDPAATMPRSQSQQRTSAGS 191
+ Y+ LK++G+ P D P+ P+ P + + + + A
Sbjct: 129 EVKIAEAYQMLKKQGIVKSDPKLPDDTTFPLPPPR-------PKNVIFEDEEKSKMLARL 181
Query: 192 YSSPPPAPYSAPQAPALSVTGPITANSEQIARLRSELDVVRGNTKVMSEM-LTEMVPGQE 250
S P A + E+I++ + ++ V N K+++EM ++ G
Sbjct: 182 LKSSHPEDLRAANKLIKEMVQEDQKRMEKISKRVNAIEEVNNNVKLLTEMVMSHSQGGAA 241
Query: 251 DSSDLELLQELNRTCRAMQQRIVELISRVSNEEVTEELLHVND 293
S +L++EL + C M+ + L S+ E +E L ++D
Sbjct: 242 AGSSEDLMKELYQRCERMRPTLFRL---ASDTEDNDEALGLSD 281
>gi|4758528 hepatocyte growth factor-regulated tyrosine kinase
substrate [Homo sapiens]
Length = 777
Score = 87.0 bits (214), Expect = 4e-17
Identities = 50/136 (36%), Positives = 78/136 (57%), Gaps = 4/136 (2%)
Query: 17 LEKATDGSLQSEDWTLNMEICDIINETEEGPKDAIRALKKRLNGNRNYREVMLALTVLET 76
L+KAT L DW ++ICD+I + + K A+ ++KK++N ++N + AL V+E+
Sbjct: 12 LDKATSQLLLETDWESILQICDLIRQGDTQAKYAVNSIKKKVN-DKNPHVALYALEVMES 70
Query: 77 CVKNCGHRFHILVANRDFIDSVLVKIISPKNNPPTIVQDKVLALIQAWADAFRSSPDLTG 136
VKNCG H VAN+ ++ + + K V++K+L LIQAWA AFR+ P
Sbjct: 71 VVKNCGQTVHDEVANKQTMEELKDLL---KRQVEVNVRNKILYLIQAWAHAFRNEPKYKV 127
Query: 137 VVHIYEELKRKGVEFP 152
V Y+ +K +G FP
Sbjct: 128 VQDTYQIMKVEGHVFP 143
>gi|14719400 ADP-ribosylation factor binding protein 3 isoform short
[Homo sapiens]
Length = 690
Score = 80.5 bits (197), Expect = 3e-15
Identities = 96/390 (24%), Positives = 162/390 (41%), Gaps = 72/390 (18%)
Query: 17 LEKATDGSLQSEDWTLNMEICDIINETEEGPKDAIRALKKRLNGNRNYREVMLALTVLET 76
L KAT+ S + EDW + CD IN+ EGP+ A+R L ++ + + E + ALT L
Sbjct: 13 LNKATNPSNRQEDWEYIIGFCDQINKELEGPQIAVRLLAHKIQSPQEW-EALQALTYL-- 69
Query: 77 CVKNCGHRFHILVANRDFIDSVLVKIISPKNNPPTIVQDKVLALIQAWADAFRSSPDLTG 136
G R +S K V+ KV+ L+ +W A P+
Sbjct: 70 -----GDR------------------VSEK------VKTKVIELLYSWTMAL---PEEAK 97
Query: 137 VVHIYEELKRKGVEFPMADLDALSPIHTPQRSVPEVDPAATMPRSQSQQRTSAGSYSSPP 196
+ Y LKR+G+ + + PI + +P P P ++++ +
Sbjct: 98 IKDAYHMLKRQGI------VQSDPPIPVDRTLIPSPPPRPKNPVFDDEEKSKLLAKLLKS 151
Query: 197 PAPYSAPQAPAL--SVTGPITANSEQIARLRSELDVVRGNTKVMSEMLTEMVPGQEDSS- 253
P +A L S+ A +++ + L+ V N +++SEML QEDSS
Sbjct: 152 KNPDDLQEANKLIKSMVKEDEARIQKVTKRLHTLEEVNNNVRLLSEMLLHY--SQEDSSD 209
Query: 254 -DLELLQELNRTCRAMQQRIVELISRV-SNEEVTEELLHVNDDLNNVFLRYERFERYR-- 309
D EL++EL C ++ + +L S N+ ++L +D+L+ V Y+ +
Sbjct: 210 GDRELMKELFDQCENKRRTLFKLASETEDNDNSLGDILQASDNLSRVINSYKTIIEGQVI 269
Query: 310 -----------SGRSVQNASNGVLNEVTE-------DNLIDLGPGSPA----VVSPMVGN 347
S + Q ++ G L ++ E +++ P P+ ++ P
Sbjct: 270 NGEVATLTLPDSEGNSQCSNQGTLIDLAELDTTNSLSSVLAPAPTPPSSGIPILPPPPQA 329
Query: 348 TAPPSSLSSQLAGLDLGTESVSGTLSSLQQ 377
+ PP S SS A LG S S LS L +
Sbjct: 330 SGPPRSRSSSQAEATLGPSSTSNALSWLDE 359
>gi|223972704 hypothetical protein LOC284418 [Homo sapiens]
Length = 922
Score = 37.4 bits (85), Expect = 0.032
Identities = 29/109 (26%), Positives = 49/109 (44%)
Query: 124 WADAFRSSPDLTGVVHIYEELKRKGVEFPMADLDALSPIHTPQRSVPEVDPAATMPRSQS 183
WA SPDL GV E +++ V+ ++ S H+ SV + M + S
Sbjct: 648 WAKLEERSPDLPGVRSKELEQRKRWVKAKELAVEGPSQEHSRPFSVEALTLTKLMITANS 707
Query: 184 QQRTSAGSYSSPPPAPYSAPQAPALSVTGPITANSEQIARLRSELDVVR 232
+++ S + S P + PQA A S+ + + Q++ L + VVR
Sbjct: 708 KEQPSKSALVSLPSWLLATPQASATSMMASVPSRPGQLSLLEGKPVVVR 756
>gi|23397666 transcriptional co-repressor Sin3A [Homo sapiens]
Length = 1273
Score = 37.0 bits (84), Expect = 0.042
Identities = 30/143 (20%), Positives = 60/143 (41%), Gaps = 3/143 (2%)
Query: 165 PQRSVPEVDPAATMPRSQSQQRTSAGSYSSPPPAPYSAPQAPALSVTGPITANSEQIARL 224
P + P+ PA SQ Q T A S +PP PY++P++P + P+T + L
Sbjct: 238 PAQPAPQPPPAKVSKPSQLQAHTPA-SQQTPPLPPYASPRSPPVQPHTPVTISLGTAPSL 296
Query: 225 RSELDVVRGNTKVMSEMLTEMVPGQED--SSDLELLQELNRTCRAMQQRIVELISRVSNE 282
++ V + + GQ D + LE+L + R ++ ++ +
Sbjct: 297 QNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQ 356
Query: 283 EVTEELLHVNDDLNNVFLRYERF 305
EV ++ + + ++ + +F
Sbjct: 357 EVYAQVARLFKNQEDLLSEFGQF 379
>gi|223941785 transcriptional co-repressor Sin3A [Homo sapiens]
Length = 1273
Score = 37.0 bits (84), Expect = 0.042
Identities = 30/143 (20%), Positives = 60/143 (41%), Gaps = 3/143 (2%)
Query: 165 PQRSVPEVDPAATMPRSQSQQRTSAGSYSSPPPAPYSAPQAPALSVTGPITANSEQIARL 224
P + P+ PA SQ Q T A S +PP PY++P++P + P+T + L
Sbjct: 238 PAQPAPQPPPAKVSKPSQLQAHTPA-SQQTPPLPPYASPRSPPVQPHTPVTISLGTAPSL 296
Query: 225 RSELDVVRGNTKVMSEMLTEMVPGQED--SSDLELLQELNRTCRAMQQRIVELISRVSNE 282
++ V + + GQ D + LE+L + R ++ ++ +
Sbjct: 297 QNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQ 356
Query: 283 EVTEELLHVNDDLNNVFLRYERF 305
EV ++ + + ++ + +F
Sbjct: 357 EVYAQVARLFKNQEDLLSEFGQF 379
>gi|223941782 transcriptional co-repressor Sin3A [Homo sapiens]
Length = 1273
Score = 37.0 bits (84), Expect = 0.042
Identities = 30/143 (20%), Positives = 60/143 (41%), Gaps = 3/143 (2%)
Query: 165 PQRSVPEVDPAATMPRSQSQQRTSAGSYSSPPPAPYSAPQAPALSVTGPITANSEQIARL 224
P + P+ PA SQ Q T A S +PP PY++P++P + P+T + L
Sbjct: 238 PAQPAPQPPPAKVSKPSQLQAHTPA-SQQTPPLPPYASPRSPPVQPHTPVTISLGTAPSL 296
Query: 225 RSELDVVRGNTKVMSEMLTEMVPGQED--SSDLELLQELNRTCRAMQQRIVELISRVSNE 282
++ V + + GQ D + LE+L + R ++ ++ +
Sbjct: 297 QNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQ 356
Query: 283 EVTEELLHVNDDLNNVFLRYERF 305
EV ++ + + ++ + +F
Sbjct: 357 EVYAQVARLFKNQEDLLSEFGQF 379
>gi|20986497 mitogen-activated protein kinase 7 isoform 1 [Homo
sapiens]
Length = 816
Score = 36.6 bits (83), Expect = 0.055
Identities = 29/103 (28%), Positives = 39/103 (37%), Gaps = 18/103 (17%)
Query: 112 IVQDKVLALIQAWADAFR-SSPDLTGVVHIYEELKRKGVEFPMADLDALSPIHTPQRSVP 170
++ D +L++ W R ++P LT V A +P TP P
Sbjct: 560 VLSDNDRSLLERWTRMARPAAPALTSV-----------------PAPAPAPTPTPTPVQP 602
Query: 171 EVDPAATMPRSQSQQRTSAGSYSSPPPAPYSAPQAPALSVTGP 213
P + + Q SAGS S P P P P PA TGP
Sbjct: 603 TSPPPGPVAQPTGPQPQSAGSTSGPVPQPACPPPGPAPHPTGP 645
>gi|209529736 mitogen-activated protein kinase 7 isoform 1 [Homo
sapiens]
Length = 816
Score = 36.6 bits (83), Expect = 0.055
Identities = 29/103 (28%), Positives = 39/103 (37%), Gaps = 18/103 (17%)
Query: 112 IVQDKVLALIQAWADAFR-SSPDLTGVVHIYEELKRKGVEFPMADLDALSPIHTPQRSVP 170
++ D +L++ W R ++P LT V A +P TP P
Sbjct: 560 VLSDNDRSLLERWTRMARPAAPALTSV-----------------PAPAPAPTPTPTPVQP 602
Query: 171 EVDPAATMPRSQSQQRTSAGSYSSPPPAPYSAPQAPALSVTGP 213
P + + Q SAGS S P P P P PA TGP
Sbjct: 603 TSPPPGPVAQPTGPQPQSAGSTSGPVPQPACPPPGPAPHPTGP 645
>gi|209529734 mitogen-activated protein kinase 7 isoform 1 [Homo
sapiens]
Length = 816
Score = 36.6 bits (83), Expect = 0.055
Identities = 29/103 (28%), Positives = 39/103 (37%), Gaps = 18/103 (17%)
Query: 112 IVQDKVLALIQAWADAFR-SSPDLTGVVHIYEELKRKGVEFPMADLDALSPIHTPQRSVP 170
++ D +L++ W R ++P LT V A +P TP P
Sbjct: 560 VLSDNDRSLLERWTRMARPAAPALTSV-----------------PAPAPAPTPTPTPVQP 602
Query: 171 EVDPAATMPRSQSQQRTSAGSYSSPPPAPYSAPQAPALSVTGP 213
P + + Q SAGS S P P P P PA TGP
Sbjct: 603 TSPPPGPVAQPTGPQPQSAGSTSGPVPQPACPPPGPAPHPTGP 645
>gi|20986499 mitogen-activated protein kinase 7 isoform 2 [Homo
sapiens]
Length = 677
Score = 36.6 bits (83), Expect = 0.055
Identities = 29/103 (28%), Positives = 39/103 (37%), Gaps = 18/103 (17%)
Query: 112 IVQDKVLALIQAWADAFR-SSPDLTGVVHIYEELKRKGVEFPMADLDALSPIHTPQRSVP 170
++ D +L++ W R ++P LT V A +P TP P
Sbjct: 421 VLSDNDRSLLERWTRMARPAAPALTSV-----------------PAPAPAPTPTPTPVQP 463
Query: 171 EVDPAATMPRSQSQQRTSAGSYSSPPPAPYSAPQAPALSVTGP 213
P + + Q SAGS S P P P P PA TGP
Sbjct: 464 TSPPPGPVAQPTGPQPQSAGSTSGPVPQPACPPPGPAPHPTGP 506
>gi|206597445 alpha 1 type XVIII collagen isoform 3 precursor [Homo
sapiens]
Length = 1751
Score = 36.2 bits (82), Expect = 0.072
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 149 VEFPMADLDALSPIHTPQRSVPEVDPAATMPRSQSQQRTSAGSYSSPPPAPYSAPQAPAL 208
+E P+ L P TPQ + + P+ +P S T AG+ +P P+P S + P
Sbjct: 145 LETPVGPLALAGPSSTPQENGTTLWPSRGIPSSPGAHTTEAGTLPAPTPSPPSLGR-PWA 203
Query: 209 SVTGP 213
+TGP
Sbjct: 204 PLTGP 208
>gi|110611235 alpha 1 type XVIII collagen isoform 1 precursor [Homo
sapiens]
Length = 1516
Score = 36.2 bits (82), Expect = 0.072
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 149 VEFPMADLDALSPIHTPQRSVPEVDPAATMPRSQSQQRTSAGSYSSPPPAPYSAPQAPAL 208
+E P+ L P TPQ + + P+ +P S T AG+ +P P+P S + P
Sbjct: 145 LETPVGPLALAGPSSTPQENGTTLWPSRGIPSSPGAHTTEAGTLPAPTPSPPSLGR-PWA 203
Query: 209 SVTGP 213
+TGP
Sbjct: 204 PLTGP 208
>gi|32698936 B-cell CLL/lymphoma 9-like [Homo sapiens]
Length = 1499
Score = 35.8 bits (81), Expect = 0.094
Identities = 59/231 (25%), Positives = 78/231 (33%), Gaps = 33/231 (14%)
Query: 152 PMADLDALSPIHTPQRSVPEVDPAATMPRSQSQQRTSAGSYSSPPPAPYSAPQAPALSVT 211
P A LD + +P P+A P+SQ PPPAP SAP PAL
Sbjct: 272 PRAKLDQAPKVPPTPEPLPLSTPSAGTPQSQPPPLPPP-----PPPAPGSAP--PALPPE 324
Query: 212 GP-------ITANSEQIARLRSELDVVRGNTKVMSEMLTEMVPGQEDSSDLELLQELNRT 264
GP + NS A NT + + PG + SS
Sbjct: 325 GPPEDSSQDLAPNSVGAASTGGGTGGTHPNTPTATTANNPLPPGGDPSSAPGPALLGEAA 384
Query: 265 CRAMQQRIVELISRVSNEEVT--EELLHVNDDLNNVFLRYERFERYRSGRSVQNASNGVL 322
QR + +S E++ E L D+ + LR E + G A G
Sbjct: 385 APGNGQRSLVGSEGLSKEQLEHRERSLQTLRDIERLLLRSGETEPFLKGPP-GGAGEG-- 441
Query: 323 NEVTEDNLIDLGPGSPAVVSPMVGNTAPPSSL---SSQLAGLDLGTESVSG 370
GP + A P TAPPS L L + T+S+ G
Sbjct: 442 -----------GPPAQAPPPPQQPPTAPPSGLKKYEEPLQSMISQTQSLGG 481
Score = 33.1 bits (74), Expect = 0.61
Identities = 45/167 (26%), Positives = 62/167 (37%), Gaps = 14/167 (8%)
Query: 335 PGSPAVVSPMVGNTAPPSSLSSQLAGLDLGTESVSGTLSSLQQCNPRDGFDMFAQTRGNS 394
P +P P + PP S LA +G S G P A T N
Sbjct: 311 PPAPGSAPPALPPEGPPEDSSQDLAPNSVGAASTGGGTGGTHPNTPT------ATTANNP 364
Query: 395 LAEQRKTVTYEDPQAVGGLASALDNRKQSSEGIPVAQPSVMDDIEVWLRT--DLKGDDLE 452
L + P A+ G A+A N ++S G ++ E L+T D++ L
Sbjct: 365 LPPGGDPSSAPGP-ALLGEAAAPGNGQRSLVGSEGLSKEQLEHRERSLQTLRDIERLLLR 423
Query: 453 EGVTSEEFDKFLE-ERAKAAEMVPDLPSPPMEAPAPASNPSGRKKPE 498
G T + FL+ A E P +PP P + PSG KK E
Sbjct: 424 SGET----EPFLKGPPGGAGEGGPPAQAPPPPQQPPTAPPSGLKKYE 466
>gi|224493912 zinc finger and SCAN domain containing 18 isoform 3
[Homo sapiens]
Length = 510
Score = 35.0 bits (79), Expect = 0.16
Identities = 37/121 (30%), Positives = 54/121 (44%), Gaps = 11/121 (9%)
Query: 392 GNSLAEQRKTVTYEDPQAVGG---LASALDNRKQSSE----GIPVAQP---SVMDDIEVW 441
G + EQ+ EDPQ +G L A +N K + G ++QP S +D E+
Sbjct: 208 GPANTEQKLKSFPEDPQHLGEWGHLDPAEENLKSYRKLLLWGYQLSQPDAASRLDTEELR 267
Query: 442 L-RTDLKGDDLEEGVTSEEFDKFLEERAKAAEMVPDLPSPPMEAPAPASNPSGRKKPERS 500
L D +G L EG +E E A A ++P+LP+ A A PSG + E
Sbjct: 268 LVERDPQGSSLPEGGRRQESAGCACEEAAPAGVLPELPTEAPPGDALADPPSGTTEEEEE 327
Query: 501 E 501
+
Sbjct: 328 Q 328
>gi|226371704 zinc finger and SCAN domain containing 18 isoform 3
[Homo sapiens]
Length = 510
Score = 35.0 bits (79), Expect = 0.16
Identities = 37/121 (30%), Positives = 54/121 (44%), Gaps = 11/121 (9%)
Query: 392 GNSLAEQRKTVTYEDPQAVGG---LASALDNRKQSSE----GIPVAQP---SVMDDIEVW 441
G + EQ+ EDPQ +G L A +N K + G ++QP S +D E+
Sbjct: 208 GPANTEQKLKSFPEDPQHLGEWGHLDPAEENLKSYRKLLLWGYQLSQPDAASRLDTEELR 267
Query: 442 L-RTDLKGDDLEEGVTSEEFDKFLEERAKAAEMVPDLPSPPMEAPAPASNPSGRKKPERS 500
L D +G L EG +E E A A ++P+LP+ A A PSG + E
Sbjct: 268 LVERDPQGSSLPEGGRRQESAGCACEEAAPAGVLPELPTEAPPGDALADPPSGTTEEEEE 327
Query: 501 E 501
+
Sbjct: 328 Q 328
>gi|224493905 zinc finger and SCAN domain containing 18 isoform 1
[Homo sapiens]
Length = 566
Score = 35.0 bits (79), Expect = 0.16
Identities = 37/121 (30%), Positives = 54/121 (44%), Gaps = 11/121 (9%)
Query: 392 GNSLAEQRKTVTYEDPQAVGG---LASALDNRKQSSE----GIPVAQP---SVMDDIEVW 441
G + EQ+ EDPQ +G L A +N K + G ++QP S +D E+
Sbjct: 264 GPANTEQKLKSFPEDPQHLGEWGHLDPAEENLKSYRKLLLWGYQLSQPDAASRLDTEELR 323
Query: 442 L-RTDLKGDDLEEGVTSEEFDKFLEERAKAAEMVPDLPSPPMEAPAPASNPSGRKKPERS 500
L D +G L EG +E E A A ++P+LP+ A A PSG + E
Sbjct: 324 LVERDPQGSSLPEGGRRQESAGCACEEAAPAGVLPELPTEAPPGDALADPPSGTTEEEEE 383
Query: 501 E 501
+
Sbjct: 384 Q 384
>gi|41327691 kinesin-like motor protein C20orf23 [Homo sapiens]
Length = 1317
Score = 35.0 bits (79), Expect = 0.16
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
Query: 225 RSELDVVRGNTKVMSEMLTEMVPGQEDSSDLELLQELNRTCRAMQQRIVELISRVSNEEV 284
R EL+ + K++ EM + + D ++LE +Q+ T R + IV+L R E +
Sbjct: 603 REELEKLESKRKLIEEMEEKQ---KSDKAELERMQQEVETQRK-ETEIVQLQIRKQEESL 658
Query: 285 TEELLHVNDDLNNVFLRYERFERYR 309
H+ + L ++ E+FE R
Sbjct: 659 KRRSFHIENKLKDLLAEKEKFEEER 683
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.130 0.367
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,401,265
Number of Sequences: 37866
Number of extensions: 970691
Number of successful extensions: 6692
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 114
Number of HSP's that attempted gapping in prelim test: 6399
Number of HSP's gapped (non-prelim): 386
length of query: 507
length of database: 18,247,518
effective HSP length: 107
effective length of query: 400
effective length of database: 14,195,856
effective search space: 5678342400
effective search space used: 5678342400
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.