BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|13162283 mal, T-cell differentiation protein-like [Homo sapiens] (153 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|13162283 mal, T-cell differentiation protein-like [Homo sapiens] 309 5e-85 gi|239741714 PREDICTED: hypothetical protein XP_002342305 [Homo ... 239 7e-64 gi|169164947 PREDICTED: similar to mal, T-cell differentiation p... 169 9e-43 gi|169164253 PREDICTED: similar to mal, T-cell differentiation p... 169 9e-43 gi|169163277 PREDICTED: similar to mal, T-cell differentiation p... 169 9e-43 gi|4505091 T-lymphocyte maturation-associated protein isoform a ... 122 2e-28 gi|16418397 MAL2 proteolipid protein [Homo sapiens] 105 1e-23 gi|12408661 T-lymphocyte maturation-associated protein isoform b... 77 8e-15 gi|32130536 CKLF-like MARVEL transmembrane domain containing 8 [... 72 2e-13 gi|7705755 plasmolipin [Homo sapiens] 59 1e-09 gi|12408663 T-lymphocyte maturation-associated protein isoform c... 53 9e-08 gi|8923370 CKLF-like MARVEL transmembrane domain containing 6 [H... 41 5e-04 gi|12408665 T-lymphocyte maturation-associated protein isoform d... 36 0.011 gi|19923993 chemokine-like factor superfamily 5 isoform a [Homo ... 33 0.095 gi|209862796 heme-responsive gene 1 [Homo sapiens] 31 0.36 gi|52353276 olfactory receptor, family 6, subfamily N, member 1 ... 31 0.36 gi|93204873 G protein-coupled receptor 157 [Homo sapiens] 30 1.1 gi|67782317 solute carrier family 6 member 9 isoform 3 [Homo sap... 29 1.4 gi|67782315 solute carrier family 6 member 9 isoform 2 [Homo sap... 29 1.4 gi|67782313 solute carrier family 6 member 9 isoform 1 [Homo sap... 29 1.4 gi|147904264 asparagine-linked glycosylation 10 homolog (yeast, ... 29 1.4 gi|194239733 solute carrier family 9 (sodium/hydrogen exchanger)... 29 1.8 gi|82546841 chemokine-like factor superfamily 5 isoform c [Homo ... 29 1.8 gi|42716275 CCR4-NOT transcription complex, subunit 1 isoform a ... 29 1.8 gi|224994205 wolframin [Homo sapiens] 28 2.3 gi|224994203 wolframin [Homo sapiens] 28 2.3 gi|14277677 protocadherin gamma subfamily C, 3 isoform 2 precurs... 28 4.0 gi|14277675 protocadherin gamma subfamily C, 3 isoform 1 precurs... 28 4.0 gi|4502663 CD37 antigen isoform A [Homo sapiens] 27 5.2 gi|31657096 chemokine-like factor superfamily 4 isoform 2 [Homo ... 27 5.2 >gi|13162283 mal, T-cell differentiation protein-like [Homo sapiens] Length = 153 Score = 309 bits (792), Expect = 5e-85 Identities = 153/153 (100%), Positives = 153/153 (100%) Query: 1 MASPDPPATSYAPSDVPSGVALFLTIPFAFFLPELIFGFLVWTMVAATHIVYPLLQGWVM 60 MASPDPPATSYAPSDVPSGVALFLTIPFAFFLPELIFGFLVWTMVAATHIVYPLLQGWVM Sbjct: 1 MASPDPPATSYAPSDVPSGVALFLTIPFAFFLPELIFGFLVWTMVAATHIVYPLLQGWVM 60 Query: 61 YVSLTSFLISLMFLLSYLFGFYKRFESWRVLDSLYHGTTGILYMSAAVLQVHATIVSEKL 120 YVSLTSFLISLMFLLSYLFGFYKRFESWRVLDSLYHGTTGILYMSAAVLQVHATIVSEKL Sbjct: 61 YVSLTSFLISLMFLLSYLFGFYKRFESWRVLDSLYHGTTGILYMSAAVLQVHATIVSEKL 120 Query: 121 LDPRIYYINSAASFFAFIATLLYILHAFSIYYH 153 LDPRIYYINSAASFFAFIATLLYILHAFSIYYH Sbjct: 121 LDPRIYYINSAASFFAFIATLLYILHAFSIYYH 153 >gi|239741714 PREDICTED: hypothetical protein XP_002342305 [Homo sapiens] Length = 231 Score = 239 bits (610), Expect = 7e-64 Identities = 118/118 (100%), Positives = 118/118 (100%) Query: 36 IFGFLVWTMVAATHIVYPLLQGWVMYVSLTSFLISLMFLLSYLFGFYKRFESWRVLDSLY 95 IFGFLVWTMVAATHIVYPLLQGWVMYVSLTSFLISLMFLLSYLFGFYKRFESWRVLDSLY Sbjct: 114 IFGFLVWTMVAATHIVYPLLQGWVMYVSLTSFLISLMFLLSYLFGFYKRFESWRVLDSLY 173 Query: 96 HGTTGILYMSAAVLQVHATIVSEKLLDPRIYYINSAASFFAFIATLLYILHAFSIYYH 153 HGTTGILYMSAAVLQVHATIVSEKLLDPRIYYINSAASFFAFIATLLYILHAFSIYYH Sbjct: 174 HGTTGILYMSAAVLQVHATIVSEKLLDPRIYYINSAASFFAFIATLLYILHAFSIYYH 231 >gi|169164947 PREDICTED: similar to mal, T-cell differentiation protein-like [Homo sapiens] Length = 130 Score = 169 bits (428), Expect = 9e-43 Identities = 90/121 (74%), Positives = 96/121 (79%), Gaps = 5/121 (4%) Query: 33 PELIFGFLVWTMVAATHIVYPLLQGWVMYVSLTSFLISLMFLLSYLFGFYKRFESWRVLD 92 P IFGF VW +VA T + PLLQGWVMYVSLT FLISL+FLLS LFG FESWRVLD Sbjct: 15 PTEIFGFWVWILVATTQVANPLLQGWVMYVSLTLFLISLVFLLSSLFG----FESWRVLD 70 Query: 93 SLYHGTTGILYMSAAVLQVHATIVSEKLLDPRIYYINSAASFFAFIATLLYILHAFSIYY 152 SLYHGTTGILYMSAAVLQVH I+SE D R Y IN+AA FFAF+ LLYILHAFSIYY Sbjct: 71 SLYHGTTGILYMSAAVLQVHVMIMSE-AQDLRNYCINTAALFFAFVTMLLYILHAFSIYY 129 Query: 153 H 153 H Sbjct: 130 H 130 >gi|169164253 PREDICTED: similar to mal, T-cell differentiation protein-like [Homo sapiens] Length = 130 Score = 169 bits (428), Expect = 9e-43 Identities = 90/121 (74%), Positives = 96/121 (79%), Gaps = 5/121 (4%) Query: 33 PELIFGFLVWTMVAATHIVYPLLQGWVMYVSLTSFLISLMFLLSYLFGFYKRFESWRVLD 92 P IFGF VW +VA T + PLLQGWVMYVSLT FLISL+FLLS LFG FESWRVLD Sbjct: 15 PTEIFGFWVWILVATTQVANPLLQGWVMYVSLTLFLISLVFLLSSLFG----FESWRVLD 70 Query: 93 SLYHGTTGILYMSAAVLQVHATIVSEKLLDPRIYYINSAASFFAFIATLLYILHAFSIYY 152 SLYHGTTGILYMSAAVLQVH I+SE D R Y IN+AA FFAF+ LLYILHAFSIYY Sbjct: 71 SLYHGTTGILYMSAAVLQVHVMIMSE-AQDLRNYCINTAALFFAFVTMLLYILHAFSIYY 129 Query: 153 H 153 H Sbjct: 130 H 130 >gi|169163277 PREDICTED: similar to mal, T-cell differentiation protein-like [Homo sapiens] Length = 130 Score = 169 bits (428), Expect = 9e-43 Identities = 90/121 (74%), Positives = 96/121 (79%), Gaps = 5/121 (4%) Query: 33 PELIFGFLVWTMVAATHIVYPLLQGWVMYVSLTSFLISLMFLLSYLFGFYKRFESWRVLD 92 P IFGF VW +VA T + PLLQGWVMYVSLT FLISL+FLLS LFG FESWRVLD Sbjct: 15 PTEIFGFWVWILVATTQVANPLLQGWVMYVSLTLFLISLVFLLSSLFG----FESWRVLD 70 Query: 93 SLYHGTTGILYMSAAVLQVHATIVSEKLLDPRIYYINSAASFFAFIATLLYILHAFSIYY 152 SLYHGTTGILYMSAAVLQVH I+SE D R Y IN+AA FFAF+ LLYILHAFSIYY Sbjct: 71 SLYHGTTGILYMSAAVLQVHVMIMSE-AQDLRNYCINTAALFFAFVTMLLYILHAFSIYY 129 Query: 153 H 153 H Sbjct: 130 H 130 >gi|4505091 T-lymphocyte maturation-associated protein isoform a [Homo sapiens] Length = 153 Score = 122 bits (305), Expect = 2e-28 Identities = 60/141 (42%), Positives = 91/141 (64%) Query: 7 PATSYAPSDVPSGVALFLTIPFAFFLPELIFGFLVWTMVAATHIVYPLLQGWVMYVSLTS 66 PA + S +PSG ++F T+P F+ E IFG LVW +VA++ + +PL+QGWVM+VS+ Sbjct: 3 PAAATGGSTLPSGFSVFTTLPDLLFIFEFIFGGLVWILVASSLVPWPLVQGWVMFVSVFC 62 Query: 67 FLISLMFLLSYLFGFYKRFESWRVLDSLYHGTTGILYMSAAVLQVHATIVSEKLLDPRIY 126 F+ + ++ Y+ G + SW LD+ YH T + Y+SA+VL+ ATI + R Y Sbjct: 63 FVATTTLIILYIIGAHGGETSWVTLDAAYHCTAALFYLSASVLEALATITMQDGFTYRHY 122 Query: 127 YINSAASFFAFIATLLYILHA 147 + N AA F++IATLLY++HA Sbjct: 123 HENIAAVVFSYIATLLYVVHA 143 >gi|16418397 MAL2 proteolipid protein [Homo sapiens] Length = 176 Score = 105 bits (263), Expect = 1e-23 Identities = 62/153 (40%), Positives = 85/153 (55%), Gaps = 13/153 (8%) Query: 4 PDPPATSYAPSDV--PSGVALFLTIPFAFFLPELIFGFLVWTMVAATHIVYPLLQGWVMY 61 P PA S+ P V P+G + T AF E++FG LVW +VA++++ PLLQGWVM+ Sbjct: 11 PPNPAVSFPPPRVTLPAGPDILRTYSGAFVCLEILFGGLVWILVASSNVPLPLLQGWVMF 70 Query: 62 VSLTSFLISLMFLLSYLFGFYKRFE-SWRVLDSLYHGTTGILYMSAAVLQVHA------- 113 VS+T+F SL+FL +L G + + +W LD YH T + Y A +L+ A Sbjct: 71 VSVTAFFFSLLFLGMFLSGMVAQIDANWNFLDFAYHFTVFVFYFGAFLLEAAATSLHDLH 130 Query: 114 ---TIVSEKLLDPRIYYINSAASFFAFIATLLY 143 TI + LL Y IN AAS FAF+ T Y Sbjct: 131 CNTTITGQPLLSDNQYNINVAASIFAFMTTACY 163 >gi|12408661 T-lymphocyte maturation-associated protein isoform b [Homo sapiens] Length = 111 Score = 76.6 bits (187), Expect = 8e-15 Identities = 40/105 (38%), Positives = 63/105 (60%), Gaps = 2/105 (1%) Query: 7 PATSYAPSDVPSGVALFLTIPFAFFLPELIFGFLVWTMVAATHIVYPLLQGWVMYVSLTS 66 PA + S +PSG ++F T+P F+ E IFG LVW +VA++ + +PL+QGWVM+VS+ Sbjct: 3 PAAATGGSTLPSGFSVFTTLPDLLFIFEFIFGGLVWILVASSLVPWPLVQGWVMFVSVFC 62 Query: 67 FLISLMFLLSYLFGFYKRFESWRVLDSLYHGTTGILYMSAAVLQV 111 F+ + ++ Y+ G + SW L Y T +LY+ AV + Sbjct: 63 FVATTTLIILYIIGAHGGETSWVTLVFSYIAT--LLYVVHAVFSL 105 >gi|32130536 CKLF-like MARVEL transmembrane domain containing 8 [Homo sapiens] Length = 173 Score = 71.6 bits (174), Expect = 2e-13 Identities = 41/121 (33%), Positives = 70/121 (57%), Gaps = 5/121 (4%) Query: 25 TIPFAFFLPELIFGFLVWTMVAATHIVYPLLQGWVMYVSLTSFLISLMFLLSYLFGFYKR 84 T+P + E++ G LVWT++A T GWVM+V++ +++++ FL+ Y+ Y R Sbjct: 39 TLPGFLIVAEIVLGLLVWTLIAGTEYFRVPAFGWVMFVAVFYWVLTVFFLIIYITMTYTR 98 Query: 85 FES--WRVLDSLYHGTTGILYMSAAVLQVHATIVSEKLLDPRIYYINSAASFFAFIATLL 142 W + ++G+ +LY+SAAV V A+ VS + D + +A+SFFAF+ T+ Sbjct: 99 IPQVPWTTVGLCFNGSAFVLYLSAAV--VDASSVSPE-RDSHNFNSWAASSFFAFLVTIC 155 Query: 143 Y 143 Y Sbjct: 156 Y 156 >gi|7705755 plasmolipin [Homo sapiens] Length = 182 Score = 59.3 bits (142), Expect = 1e-09 Identities = 38/126 (30%), Positives = 69/126 (54%), Gaps = 5/126 (3%) Query: 29 AFFLPELIFGFLVWTMVAAT-HIVYPLLQGWVMYVSLTSFLISLMFLLSYLFGFYKR--F 85 A L +L+ G LVW ++A T + +YP GWVM+V++ +L++++ YLF + + Sbjct: 39 ALMLLQLVLGLLVWALIADTPYHLYPAY-GWVMFVAVFLWLVTIVLFNLYLFQLHMKLYM 97 Query: 86 ESWRVLDSLYHGTTGILYMSAAVLQVHATIVSEKLLDPRIYYINSAASFFAFIATLLYIL 145 W ++ +++ + +LY++ A + A + L R Y +AASFFA + + Y + Sbjct: 98 VPWPLVLMIFNISATVLYIT-AFIACSAAVDLTSLRGTRPYNQRAAASFFACLVMIAYGV 156 Query: 146 HAFSIY 151 AF Y Sbjct: 157 SAFFSY 162 >gi|12408663 T-lymphocyte maturation-associated protein isoform c [Homo sapiens] Length = 97 Score = 53.1 bits (126), Expect = 9e-08 Identities = 26/56 (46%), Positives = 37/56 (66%) Query: 92 DSLYHGTTGILYMSAAVLQVHATIVSEKLLDPRIYYINSAASFFAFIATLLYILHA 147 D+ YH T + Y+SA+VL+ ATI + R Y+ N AA F++IATLLY++HA Sbjct: 32 DAAYHCTAALFYLSASVLEALATITMQDGFTYRHYHENIAAVVFSYIATLLYVVHA 87 >gi|8923370 CKLF-like MARVEL transmembrane domain containing 6 [Homo sapiens] Length = 183 Score = 40.8 bits (94), Expect = 5e-04 Identities = 28/96 (29%), Positives = 53/96 (55%), Gaps = 15/96 (15%) Query: 61 YVSLTSFLISLMFLLSYLFGFYKRFESWRVLDSLYHGT--TGILYMSAAVLQV--HATIV 116 +VS ++FL+SL+ L+ Y FY+R ++ +V S ++ T TG +++ A+++ V H Sbjct: 73 FVSCSAFLLSLLILIVYCTPFYERVDTTKVKSSDFYITLGTGCVFLLASIIFVSTHDRTS 132 Query: 117 SEKLLDPRIYYINSAASFFAFIATLLYILHAFSIYY 152 +E AA F FIA+ +++L ++ Y Sbjct: 133 AE-----------IAAIVFGFIASFMFLLDFITMLY 157 >gi|12408665 T-lymphocyte maturation-associated protein isoform d [Homo sapiens] Length = 55 Score = 36.2 bits (82), Expect = 0.011 Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 1/50 (2%) Query: 7 PATSYAPSDVPSGVALFLTIPFAFFLPELIFGFLVWTMVAATHIVYPLLQ 56 PA + S +PSG ++F T+P F+ E +F ++ T++ H V+ L++ Sbjct: 3 PAAATGGSTLPSGFSVFTTLPDLLFIFEFVFSYIA-TLLYVVHAVFSLIR 51 >gi|19923993 chemokine-like factor superfamily 5 isoform a [Homo sapiens] Length = 156 Score = 33.1 bits (74), Expect = 0.095 Identities = 31/119 (26%), Positives = 51/119 (42%), Gaps = 16/119 (13%) Query: 38 GFLVWTMVAATHIVYPLLQGWV---MYVSLTSFLISLMFLLSYLFGFYKRFE--SWRVLD 92 G L+ T +A T I++ + M +L F I+L FL Y +Y+RF+ +W LD Sbjct: 35 GILLETELALTLIIFICFTASISAYMAAALLEFFITLAFLFLYATQYYQRFDRINWPCLD 94 Query: 93 SLYHGTTGILYMSAAVLQVHATIVSEKLLDPRIYYINSAASFFAFIATLLYILHAFSIY 151 L + I+++ + V + + AA F I ++ AF IY Sbjct: 95 FLRCVSAIIIFLVVSFAAVTSRDGAA-----------IAAFVFGIILVSIFAYDAFKIY 142 >gi|209862796 heme-responsive gene 1 [Homo sapiens] Length = 146 Score = 31.2 bits (69), Expect = 0.36 Identities = 29/115 (25%), Positives = 50/115 (43%), Gaps = 16/115 (13%) Query: 39 FLVWTMV------AATHIVYPLLQGWVMYVSLTSFLISLMFLLSYLFGFYKRFESWRVLD 92 FLVWT+V AA + +L WV+ + +M++ Y + K + + Sbjct: 26 FLVWTVVYRQPGTAAMGGLAGVLALWVL-------VTHVMYMQDYWRTWLKGLRGFFFVG 78 Query: 93 SLYHGTTGILYMSAAVLQVHATIVSEKLLDPRIYYINSAASFFAFIATLLYILHA 147 L+ + + + VL + + L DP YY++S SF +F L L+A Sbjct: 79 VLFSAVSIAAFCTFLVLAITR---HQSLTDPTSYYLSSVWSFISFKWAFLLSLYA 130 >gi|52353276 olfactory receptor, family 6, subfamily N, member 1 [Homo sapiens] Length = 312 Score = 31.2 bits (69), Expect = 0.36 Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 16/115 (13%) Query: 42 WTMVAATHIV-YPLLQGWVMYVSLTSFLISLMFLLSYLFGFYKRFESWRVLDSLYH---- 96 W+ VA I+ +P LQG +Y+ L LI LM +L L F R+ +YH Sbjct: 6 WSQVAEFIILGFPHLQGVQIYLFLLLLLIYLMTVLGNLLIFLVVCLDSRLHTPMYHFVSI 65 Query: 97 -GTTGILYMSAAVLQVHATIVSEK--------LLDPRIYYINSAASFFAFIATLL 142 + + Y +A + ++ A ++SEK LL +IY+ +S + ++ T + Sbjct: 66 LSFSELGYTAATIPKMLANLLSEKKTISFSGCLL--QIYFFHSLGATECYLLTAM 118 >gi|93204873 G protein-coupled receptor 157 [Homo sapiens] Length = 335 Score = 29.6 bits (65), Expect = 1.1 Identities = 33/119 (27%), Positives = 49/119 (41%), Gaps = 18/119 (15%) Query: 4 PDPPATSYAPSDVPSGVALFLTIPFAFFLPELIFGFLVWTMVAATHIVYPLLQGWVMYVS 63 P PP T PS+ + + L L G LV ATH ++P L+ + Sbjct: 3 PSPPPTELVPSERA-------VVLLSCALSALGSGLLV-----ATHALWPDLRSRARRLL 50 Query: 64 LTSFLISLMFLLSYLFGFYKRF--ESWR-VLD---SLYHGTTGILYMSAAVLQVHATIV 116 L L L+ SY +G + F SW VL S + T+ + A L ++ +IV Sbjct: 51 LFLSLADLLSAASYFYGVLQNFAGPSWDCVLQGALSTFANTSSFFWTVAIALYLYLSIV 109 >gi|67782317 solute carrier family 6 member 9 isoform 3 [Homo sapiens] Length = 633 Score = 29.3 bits (64), Expect = 1.4 Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 2/79 (2%) Query: 22 LFLTIPFAFFLPELIFGFLVWTMVAATHIVYPLLQ--GWVMYVSLTSFLISLMFLLSYLF 79 LF I + F P +IF LV+T++ I Y Q GW + + L S++ + Y Sbjct: 497 LFFQICWRFVSPAIIFFILVFTVIQYQPITYNHYQYPGWAVAIGFLMALSSVLCIPLYAM 556 Query: 80 GFYKRFESWRVLDSLYHGT 98 R + +L L + T Sbjct: 557 FRLCRTDGDTLLQRLKNAT 575 >gi|67782315 solute carrier family 6 member 9 isoform 2 [Homo sapiens] Length = 706 Score = 29.3 bits (64), Expect = 1.4 Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 2/79 (2%) Query: 22 LFLTIPFAFFLPELIFGFLVWTMVAATHIVYPLLQ--GWVMYVSLTSFLISLMFLLSYLF 79 LF I + F P +IF LV+T++ I Y Q GW + + L S++ + Y Sbjct: 570 LFFQICWRFVSPAIIFFILVFTVIQYQPITYNHYQYPGWAVAIGFLMALSSVLCIPLYAM 629 Query: 80 GFYKRFESWRVLDSLYHGT 98 R + +L L + T Sbjct: 630 FRLCRTDGDTLLQRLKNAT 648 >gi|67782313 solute carrier family 6 member 9 isoform 1 [Homo sapiens] Length = 652 Score = 29.3 bits (64), Expect = 1.4 Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 2/79 (2%) Query: 22 LFLTIPFAFFLPELIFGFLVWTMVAATHIVYPLLQ--GWVMYVSLTSFLISLMFLLSYLF 79 LF I + F P +IF LV+T++ I Y Q GW + + L S++ + Y Sbjct: 516 LFFQICWRFVSPAIIFFILVFTVIQYQPITYNHYQYPGWAVAIGFLMALSSVLCIPLYAM 575 Query: 80 GFYKRFESWRVLDSLYHGT 98 R + +L L + T Sbjct: 576 FRLCRTDGDTLLQRLKNAT 594 >gi|147904264 asparagine-linked glycosylation 10 homolog (yeast, alpha-1,2-glucosyltransferase) [Homo sapiens] Length = 473 Score = 29.3 bits (64), Expect = 1.4 Identities = 27/121 (22%), Positives = 51/121 (42%), Gaps = 12/121 (9%) Query: 12 APSDVPSGVALFLTIPFAFFLPELIFGFLVWTMVAATHIVYPLLQGWVMYVSLTSF---- 67 +PS + + ++L FF+ L+ FLVW A + + + YV F Sbjct: 308 SPSKIKTFLSLVWKRRILFFVVTLVSVFLVWKFTYAHKYLLADNRHYTFYVWKRVFQRYE 367 Query: 68 LISLMFLLSYLFGFYKRFESWRVLDSLYHGTTGILYMSAAVLQVHATIVSEKLLDPRIYY 127 + + + +Y+F W + DSL + I + + + IV +KLL+ R + Sbjct: 368 TVKYLLVPAYIFA------GWSIADSL--KSKSIFWNLMFFICLFTVIVPQKLLEFRYFI 419 Query: 128 I 128 + Sbjct: 420 L 420 >gi|194239733 solute carrier family 9 (sodium/hydrogen exchanger), isoform 3 [Homo sapiens] Length = 834 Score = 28.9 bits (63), Expect = 1.8 Identities = 18/62 (29%), Positives = 28/62 (45%) Query: 15 DVPSGVALFLTIPFAFFLPELIFGFLVWTMVAATHIVYPLLQGWVMYVSLTSFLISLMFL 74 D G+ F + L ++F FL+ + T V + G+V +S S+L S M Sbjct: 246 DCVKGIVSFFVVSLGGTLVGVVFAFLLSLVTRFTKHVRIIEPGFVFIISYLSYLTSEMLS 305 Query: 75 LS 76 LS Sbjct: 306 LS 307 >gi|82546841 chemokine-like factor superfamily 5 isoform c [Homo sapiens] Length = 125 Score = 28.9 bits (63), Expect = 1.8 Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 3/52 (5%) Query: 38 GFLVWTMVAATHIVYPLLQGWV---MYVSLTSFLISLMFLLSYLFGFYKRFE 86 G L+ T +A T I++ + M +L F I+L FL Y +Y+RF+ Sbjct: 35 GILLETELALTLIIFICFTASISAYMAAALLEFFITLAFLFLYATQYYQRFD 86 >gi|42716275 CCR4-NOT transcription complex, subunit 1 isoform a [Homo sapiens] Length = 2376 Score = 28.9 bits (63), Expect = 1.8 Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 6/50 (12%) Query: 53 PLLQGWVMYVSLTSFLISLMFLLSYLFGFYKRFESWRVLDSLYHGTTGIL 102 P +GW MY L L+ L YL F + E + + LY GT +L Sbjct: 2056 PQQKGWPMYAQL------LIDLFKYLAPFLRNVELTKPMQILYKGTLRVL 2099 >gi|224994205 wolframin [Homo sapiens] Length = 890 Score = 28.5 bits (62), Expect = 2.3 Identities = 15/42 (35%), Positives = 23/42 (54%) Query: 28 FAFFLPELIFGFLVWTMVAATHIVYPLLQGWVMYVSLTSFLI 69 FAFF+P +IF +MV T V+ + W + +LT L+ Sbjct: 341 FAFFIPLVIFYLSFISMVICTLKVFQDSKAWENFRTLTDLLL 382 >gi|224994203 wolframin [Homo sapiens] Length = 890 Score = 28.5 bits (62), Expect = 2.3 Identities = 15/42 (35%), Positives = 23/42 (54%) Query: 28 FAFFLPELIFGFLVWTMVAATHIVYPLLQGWVMYVSLTSFLI 69 FAFF+P +IF +MV T V+ + W + +LT L+ Sbjct: 341 FAFFIPLVIFYLSFISMVICTLKVFQDSKAWENFRTLTDLLL 382 >gi|14277677 protocadherin gamma subfamily C, 3 isoform 2 precursor [Homo sapiens] Length = 863 Score = 27.7 bits (60), Expect = 4.0 Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Query: 61 YVSLTSFLISLMFLLSYLFGFYKRFESWRVLDSLYHGTTGILYMSAAVLQVHATIVSEKL 120 Y+ L+ L+S+ F+++ + W+ LY LY + +HA V L Sbjct: 693 YLLLSLILVSVGFVVTVFGVIIFKVYKWKQSRDLYRAPVSSLYRTPGP-SLHADAVRGGL 751 Query: 121 LDPRIYY 127 + P +Y+ Sbjct: 752 MSPHLYH 758 >gi|14277675 protocadherin gamma subfamily C, 3 isoform 1 precursor [Homo sapiens] Length = 934 Score = 27.7 bits (60), Expect = 4.0 Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Query: 61 YVSLTSFLISLMFLLSYLFGFYKRFESWRVLDSLYHGTTGILYMSAAVLQVHATIVSEKL 120 Y+ L+ L+S+ F+++ + W+ LY LY + +HA V L Sbjct: 693 YLLLSLILVSVGFVVTVFGVIIFKVYKWKQSRDLYRAPVSSLYRTPGP-SLHADAVRGGL 751 Query: 121 LDPRIYY 127 + P +Y+ Sbjct: 752 MSPHLYH 758 >gi|4502663 CD37 antigen isoform A [Homo sapiens] Length = 281 Score = 27.3 bits (59), Expect = 5.2 Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 10/96 (10%) Query: 22 LFLTIPFAFFLPELIFGFLVWTMVAATHIV------YPLLQGWVMYVSLTSFLISLMFLL 75 LF+ F F L LIF F +W ++ T V + LQ W ++++ + LL Sbjct: 15 LFVFNLFFFVLGSLIFCFGIWILIDKTSFVSFVGLAFVPLQIWSKVLAISGIFTMGIALL 74 Query: 76 SYLFGFYKRFESWRVLDSLYHGTTGILYMSAAVLQV 111 G + R L LY G +L+ + L + Sbjct: 75 ----GCVGALKELRCLLGLYFGMLLLLFATQITLGI 106 >gi|31657096 chemokine-like factor superfamily 4 isoform 2 [Homo sapiens] Length = 208 Score = 27.3 bits (59), Expect = 5.2 Identities = 20/90 (22%), Positives = 42/90 (46%), Gaps = 11/90 (12%) Query: 61 YVSLTSFLISLMFLLSYLFGFYKRFE--SWRVLDSLYHGTTGILYMSAAVLQVHATIVSE 118 +VS ++F+++ + L+ + + R +W + D + G + L+ A+++ Sbjct: 89 FVSCSAFVVTGVLLIMFSLNLHMRIPQINWNLTDLVNTGLSAFLFFIASIVLA------- 141 Query: 119 KLLDPRIYYINSAASFFAFIATLLYILHAF 148 L+ R AA F F+AT Y ++ F Sbjct: 142 -ALNHRAG-AEIAAVIFGFLATAAYAVNTF 169 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.332 0.143 0.448 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 5,403,253 Number of Sequences: 37866 Number of extensions: 208504 Number of successful extensions: 853 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 16 Number of HSP's successfully gapped in prelim test: 24 Number of HSP's that attempted gapping in prelim test: 822 Number of HSP's gapped (non-prelim): 45 length of query: 153 length of database: 18,247,518 effective HSP length: 93 effective length of query: 60 effective length of database: 14,725,980 effective search space: 883558800 effective search space used: 883558800 T: 11 A: 40 X1: 15 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.9 bits) S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.