Guide to the Human Genome
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Search of human proteins with 13162283

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|13162283 mal, T-cell differentiation protein-like [Homo
sapiens]
         (153 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|13162283 mal, T-cell differentiation protein-like [Homo sapiens]   309   5e-85
gi|239741714 PREDICTED: hypothetical protein XP_002342305 [Homo ...   239   7e-64
gi|169164947 PREDICTED: similar to mal, T-cell differentiation p...   169   9e-43
gi|169164253 PREDICTED: similar to mal, T-cell differentiation p...   169   9e-43
gi|169163277 PREDICTED: similar to mal, T-cell differentiation p...   169   9e-43
gi|4505091 T-lymphocyte maturation-associated protein isoform a ...   122   2e-28
gi|16418397 MAL2 proteolipid protein [Homo sapiens]                   105   1e-23
gi|12408661 T-lymphocyte maturation-associated protein isoform b...    77   8e-15
gi|32130536 CKLF-like MARVEL transmembrane domain containing 8 [...    72   2e-13
gi|7705755 plasmolipin [Homo sapiens]                                  59   1e-09
gi|12408663 T-lymphocyte maturation-associated protein isoform c...    53   9e-08
gi|8923370 CKLF-like MARVEL transmembrane domain containing 6 [H...    41   5e-04
gi|12408665 T-lymphocyte maturation-associated protein isoform d...    36   0.011
gi|19923993 chemokine-like factor superfamily 5 isoform a [Homo ...    33   0.095
gi|209862796 heme-responsive gene 1 [Homo sapiens]                     31   0.36 
gi|52353276 olfactory receptor, family 6, subfamily N, member 1 ...    31   0.36 
gi|93204873 G protein-coupled receptor 157 [Homo sapiens]              30   1.1  
gi|67782317 solute carrier family 6 member 9 isoform 3 [Homo sap...    29   1.4  
gi|67782315 solute carrier family 6 member 9 isoform 2 [Homo sap...    29   1.4  
gi|67782313 solute carrier family 6 member 9 isoform 1 [Homo sap...    29   1.4  
gi|147904264 asparagine-linked glycosylation 10 homolog (yeast, ...    29   1.4  
gi|194239733 solute carrier family 9 (sodium/hydrogen exchanger)...    29   1.8  
gi|82546841 chemokine-like factor superfamily 5 isoform c [Homo ...    29   1.8  
gi|42716275 CCR4-NOT transcription complex, subunit 1 isoform a ...    29   1.8  
gi|224994205 wolframin [Homo sapiens]                                  28   2.3  
gi|224994203 wolframin [Homo sapiens]                                  28   2.3  
gi|14277677 protocadherin gamma subfamily C, 3 isoform 2 precurs...    28   4.0  
gi|14277675 protocadherin gamma subfamily C, 3 isoform 1 precurs...    28   4.0  
gi|4502663 CD37 antigen isoform A [Homo sapiens]                       27   5.2  
gi|31657096 chemokine-like factor superfamily 4 isoform 2 [Homo ...    27   5.2  

>gi|13162283 mal, T-cell differentiation protein-like [Homo sapiens]
          Length = 153

 Score =  309 bits (792), Expect = 5e-85
 Identities = 153/153 (100%), Positives = 153/153 (100%)

Query: 1   MASPDPPATSYAPSDVPSGVALFLTIPFAFFLPELIFGFLVWTMVAATHIVYPLLQGWVM 60
           MASPDPPATSYAPSDVPSGVALFLTIPFAFFLPELIFGFLVWTMVAATHIVYPLLQGWVM
Sbjct: 1   MASPDPPATSYAPSDVPSGVALFLTIPFAFFLPELIFGFLVWTMVAATHIVYPLLQGWVM 60

Query: 61  YVSLTSFLISLMFLLSYLFGFYKRFESWRVLDSLYHGTTGILYMSAAVLQVHATIVSEKL 120
           YVSLTSFLISLMFLLSYLFGFYKRFESWRVLDSLYHGTTGILYMSAAVLQVHATIVSEKL
Sbjct: 61  YVSLTSFLISLMFLLSYLFGFYKRFESWRVLDSLYHGTTGILYMSAAVLQVHATIVSEKL 120

Query: 121 LDPRIYYINSAASFFAFIATLLYILHAFSIYYH 153
           LDPRIYYINSAASFFAFIATLLYILHAFSIYYH
Sbjct: 121 LDPRIYYINSAASFFAFIATLLYILHAFSIYYH 153


>gi|239741714 PREDICTED: hypothetical protein XP_002342305 [Homo
           sapiens]
          Length = 231

 Score =  239 bits (610), Expect = 7e-64
 Identities = 118/118 (100%), Positives = 118/118 (100%)

Query: 36  IFGFLVWTMVAATHIVYPLLQGWVMYVSLTSFLISLMFLLSYLFGFYKRFESWRVLDSLY 95
           IFGFLVWTMVAATHIVYPLLQGWVMYVSLTSFLISLMFLLSYLFGFYKRFESWRVLDSLY
Sbjct: 114 IFGFLVWTMVAATHIVYPLLQGWVMYVSLTSFLISLMFLLSYLFGFYKRFESWRVLDSLY 173

Query: 96  HGTTGILYMSAAVLQVHATIVSEKLLDPRIYYINSAASFFAFIATLLYILHAFSIYYH 153
           HGTTGILYMSAAVLQVHATIVSEKLLDPRIYYINSAASFFAFIATLLYILHAFSIYYH
Sbjct: 174 HGTTGILYMSAAVLQVHATIVSEKLLDPRIYYINSAASFFAFIATLLYILHAFSIYYH 231


>gi|169164947 PREDICTED: similar to mal, T-cell differentiation
           protein-like [Homo sapiens]
          Length = 130

 Score =  169 bits (428), Expect = 9e-43
 Identities = 90/121 (74%), Positives = 96/121 (79%), Gaps = 5/121 (4%)

Query: 33  PELIFGFLVWTMVAATHIVYPLLQGWVMYVSLTSFLISLMFLLSYLFGFYKRFESWRVLD 92
           P  IFGF VW +VA T +  PLLQGWVMYVSLT FLISL+FLLS LFG    FESWRVLD
Sbjct: 15  PTEIFGFWVWILVATTQVANPLLQGWVMYVSLTLFLISLVFLLSSLFG----FESWRVLD 70

Query: 93  SLYHGTTGILYMSAAVLQVHATIVSEKLLDPRIYYINSAASFFAFIATLLYILHAFSIYY 152
           SLYHGTTGILYMSAAVLQVH  I+SE   D R Y IN+AA FFAF+  LLYILHAFSIYY
Sbjct: 71  SLYHGTTGILYMSAAVLQVHVMIMSE-AQDLRNYCINTAALFFAFVTMLLYILHAFSIYY 129

Query: 153 H 153
           H
Sbjct: 130 H 130


>gi|169164253 PREDICTED: similar to mal, T-cell differentiation
           protein-like [Homo sapiens]
          Length = 130

 Score =  169 bits (428), Expect = 9e-43
 Identities = 90/121 (74%), Positives = 96/121 (79%), Gaps = 5/121 (4%)

Query: 33  PELIFGFLVWTMVAATHIVYPLLQGWVMYVSLTSFLISLMFLLSYLFGFYKRFESWRVLD 92
           P  IFGF VW +VA T +  PLLQGWVMYVSLT FLISL+FLLS LFG    FESWRVLD
Sbjct: 15  PTEIFGFWVWILVATTQVANPLLQGWVMYVSLTLFLISLVFLLSSLFG----FESWRVLD 70

Query: 93  SLYHGTTGILYMSAAVLQVHATIVSEKLLDPRIYYINSAASFFAFIATLLYILHAFSIYY 152
           SLYHGTTGILYMSAAVLQVH  I+SE   D R Y IN+AA FFAF+  LLYILHAFSIYY
Sbjct: 71  SLYHGTTGILYMSAAVLQVHVMIMSE-AQDLRNYCINTAALFFAFVTMLLYILHAFSIYY 129

Query: 153 H 153
           H
Sbjct: 130 H 130


>gi|169163277 PREDICTED: similar to mal, T-cell differentiation
           protein-like [Homo sapiens]
          Length = 130

 Score =  169 bits (428), Expect = 9e-43
 Identities = 90/121 (74%), Positives = 96/121 (79%), Gaps = 5/121 (4%)

Query: 33  PELIFGFLVWTMVAATHIVYPLLQGWVMYVSLTSFLISLMFLLSYLFGFYKRFESWRVLD 92
           P  IFGF VW +VA T +  PLLQGWVMYVSLT FLISL+FLLS LFG    FESWRVLD
Sbjct: 15  PTEIFGFWVWILVATTQVANPLLQGWVMYVSLTLFLISLVFLLSSLFG----FESWRVLD 70

Query: 93  SLYHGTTGILYMSAAVLQVHATIVSEKLLDPRIYYINSAASFFAFIATLLYILHAFSIYY 152
           SLYHGTTGILYMSAAVLQVH  I+SE   D R Y IN+AA FFAF+  LLYILHAFSIYY
Sbjct: 71  SLYHGTTGILYMSAAVLQVHVMIMSE-AQDLRNYCINTAALFFAFVTMLLYILHAFSIYY 129

Query: 153 H 153
           H
Sbjct: 130 H 130


>gi|4505091 T-lymphocyte maturation-associated protein isoform a
           [Homo sapiens]
          Length = 153

 Score =  122 bits (305), Expect = 2e-28
 Identities = 60/141 (42%), Positives = 91/141 (64%)

Query: 7   PATSYAPSDVPSGVALFLTIPFAFFLPELIFGFLVWTMVAATHIVYPLLQGWVMYVSLTS 66
           PA +   S +PSG ++F T+P   F+ E IFG LVW +VA++ + +PL+QGWVM+VS+  
Sbjct: 3   PAAATGGSTLPSGFSVFTTLPDLLFIFEFIFGGLVWILVASSLVPWPLVQGWVMFVSVFC 62

Query: 67  FLISLMFLLSYLFGFYKRFESWRVLDSLYHGTTGILYMSAAVLQVHATIVSEKLLDPRIY 126
           F+ +   ++ Y+ G +    SW  LD+ YH T  + Y+SA+VL+  ATI  +     R Y
Sbjct: 63  FVATTTLIILYIIGAHGGETSWVTLDAAYHCTAALFYLSASVLEALATITMQDGFTYRHY 122

Query: 127 YINSAASFFAFIATLLYILHA 147
           + N AA  F++IATLLY++HA
Sbjct: 123 HENIAAVVFSYIATLLYVVHA 143


>gi|16418397 MAL2 proteolipid protein [Homo sapiens]
          Length = 176

 Score =  105 bits (263), Expect = 1e-23
 Identities = 62/153 (40%), Positives = 85/153 (55%), Gaps = 13/153 (8%)

Query: 4   PDPPATSYAPSDV--PSGVALFLTIPFAFFLPELIFGFLVWTMVAATHIVYPLLQGWVMY 61
           P  PA S+ P  V  P+G  +  T   AF   E++FG LVW +VA++++  PLLQGWVM+
Sbjct: 11  PPNPAVSFPPPRVTLPAGPDILRTYSGAFVCLEILFGGLVWILVASSNVPLPLLQGWVMF 70

Query: 62  VSLTSFLISLMFLLSYLFGFYKRFE-SWRVLDSLYHGTTGILYMSAAVLQVHA------- 113
           VS+T+F  SL+FL  +L G   + + +W  LD  YH T  + Y  A +L+  A       
Sbjct: 71  VSVTAFFFSLLFLGMFLSGMVAQIDANWNFLDFAYHFTVFVFYFGAFLLEAAATSLHDLH 130

Query: 114 ---TIVSEKLLDPRIYYINSAASFFAFIATLLY 143
              TI  + LL    Y IN AAS FAF+ T  Y
Sbjct: 131 CNTTITGQPLLSDNQYNINVAASIFAFMTTACY 163


>gi|12408661 T-lymphocyte maturation-associated protein isoform b
           [Homo sapiens]
          Length = 111

 Score = 76.6 bits (187), Expect = 8e-15
 Identities = 40/105 (38%), Positives = 63/105 (60%), Gaps = 2/105 (1%)

Query: 7   PATSYAPSDVPSGVALFLTIPFAFFLPELIFGFLVWTMVAATHIVYPLLQGWVMYVSLTS 66
           PA +   S +PSG ++F T+P   F+ E IFG LVW +VA++ + +PL+QGWVM+VS+  
Sbjct: 3   PAAATGGSTLPSGFSVFTTLPDLLFIFEFIFGGLVWILVASSLVPWPLVQGWVMFVSVFC 62

Query: 67  FLISLMFLLSYLFGFYKRFESWRVLDSLYHGTTGILYMSAAVLQV 111
           F+ +   ++ Y+ G +    SW  L   Y  T  +LY+  AV  +
Sbjct: 63  FVATTTLIILYIIGAHGGETSWVTLVFSYIAT--LLYVVHAVFSL 105


>gi|32130536 CKLF-like MARVEL transmembrane domain containing 8
           [Homo sapiens]
          Length = 173

 Score = 71.6 bits (174), Expect = 2e-13
 Identities = 41/121 (33%), Positives = 70/121 (57%), Gaps = 5/121 (4%)

Query: 25  TIPFAFFLPELIFGFLVWTMVAATHIVYPLLQGWVMYVSLTSFLISLMFLLSYLFGFYKR 84
           T+P    + E++ G LVWT++A T        GWVM+V++  +++++ FL+ Y+   Y R
Sbjct: 39  TLPGFLIVAEIVLGLLVWTLIAGTEYFRVPAFGWVMFVAVFYWVLTVFFLIIYITMTYTR 98

Query: 85  FES--WRVLDSLYHGTTGILYMSAAVLQVHATIVSEKLLDPRIYYINSAASFFAFIATLL 142
                W  +   ++G+  +LY+SAAV  V A+ VS +  D   +   +A+SFFAF+ T+ 
Sbjct: 99  IPQVPWTTVGLCFNGSAFVLYLSAAV--VDASSVSPE-RDSHNFNSWAASSFFAFLVTIC 155

Query: 143 Y 143
           Y
Sbjct: 156 Y 156


>gi|7705755 plasmolipin [Homo sapiens]
          Length = 182

 Score = 59.3 bits (142), Expect = 1e-09
 Identities = 38/126 (30%), Positives = 69/126 (54%), Gaps = 5/126 (3%)

Query: 29  AFFLPELIFGFLVWTMVAAT-HIVYPLLQGWVMYVSLTSFLISLMFLLSYLFGFYKR--F 85
           A  L +L+ G LVW ++A T + +YP   GWVM+V++  +L++++    YLF  + +   
Sbjct: 39  ALMLLQLVLGLLVWALIADTPYHLYPAY-GWVMFVAVFLWLVTIVLFNLYLFQLHMKLYM 97

Query: 86  ESWRVLDSLYHGTTGILYMSAAVLQVHATIVSEKLLDPRIYYINSAASFFAFIATLLYIL 145
             W ++  +++ +  +LY++ A +   A +    L   R Y   +AASFFA +  + Y +
Sbjct: 98  VPWPLVLMIFNISATVLYIT-AFIACSAAVDLTSLRGTRPYNQRAAASFFACLVMIAYGV 156

Query: 146 HAFSIY 151
            AF  Y
Sbjct: 157 SAFFSY 162


>gi|12408663 T-lymphocyte maturation-associated protein isoform c
           [Homo sapiens]
          Length = 97

 Score = 53.1 bits (126), Expect = 9e-08
 Identities = 26/56 (46%), Positives = 37/56 (66%)

Query: 92  DSLYHGTTGILYMSAAVLQVHATIVSEKLLDPRIYYINSAASFFAFIATLLYILHA 147
           D+ YH T  + Y+SA+VL+  ATI  +     R Y+ N AA  F++IATLLY++HA
Sbjct: 32  DAAYHCTAALFYLSASVLEALATITMQDGFTYRHYHENIAAVVFSYIATLLYVVHA 87


>gi|8923370 CKLF-like MARVEL transmembrane domain containing 6 [Homo
           sapiens]
          Length = 183

 Score = 40.8 bits (94), Expect = 5e-04
 Identities = 28/96 (29%), Positives = 53/96 (55%), Gaps = 15/96 (15%)

Query: 61  YVSLTSFLISLMFLLSYLFGFYKRFESWRVLDSLYHGT--TGILYMSAAVLQV--HATIV 116
           +VS ++FL+SL+ L+ Y   FY+R ++ +V  S ++ T  TG +++ A+++ V  H    
Sbjct: 73  FVSCSAFLLSLLILIVYCTPFYERVDTTKVKSSDFYITLGTGCVFLLASIIFVSTHDRTS 132

Query: 117 SEKLLDPRIYYINSAASFFAFIATLLYILHAFSIYY 152
           +E            AA  F FIA+ +++L   ++ Y
Sbjct: 133 AE-----------IAAIVFGFIASFMFLLDFITMLY 157


>gi|12408665 T-lymphocyte maturation-associated protein isoform d
          [Homo sapiens]
          Length = 55

 Score = 36.2 bits (82), Expect = 0.011
 Identities = 16/50 (32%), Positives = 30/50 (60%), Gaps = 1/50 (2%)

Query: 7  PATSYAPSDVPSGVALFLTIPFAFFLPELIFGFLVWTMVAATHIVYPLLQ 56
          PA +   S +PSG ++F T+P   F+ E +F ++  T++   H V+ L++
Sbjct: 3  PAAATGGSTLPSGFSVFTTLPDLLFIFEFVFSYIA-TLLYVVHAVFSLIR 51


>gi|19923993 chemokine-like factor superfamily 5 isoform a [Homo
           sapiens]
          Length = 156

 Score = 33.1 bits (74), Expect = 0.095
 Identities = 31/119 (26%), Positives = 51/119 (42%), Gaps = 16/119 (13%)

Query: 38  GFLVWTMVAATHIVYPLLQGWV---MYVSLTSFLISLMFLLSYLFGFYKRFE--SWRVLD 92
           G L+ T +A T I++      +   M  +L  F I+L FL  Y   +Y+RF+  +W  LD
Sbjct: 35  GILLETELALTLIIFICFTASISAYMAAALLEFFITLAFLFLYATQYYQRFDRINWPCLD 94

Query: 93  SLYHGTTGILYMSAAVLQVHATIVSEKLLDPRIYYINSAASFFAFIATLLYILHAFSIY 151
            L   +  I+++  +   V +   +             AA  F  I   ++   AF IY
Sbjct: 95  FLRCVSAIIIFLVVSFAAVTSRDGAA-----------IAAFVFGIILVSIFAYDAFKIY 142


>gi|209862796 heme-responsive gene 1 [Homo sapiens]
          Length = 146

 Score = 31.2 bits (69), Expect = 0.36
 Identities = 29/115 (25%), Positives = 50/115 (43%), Gaps = 16/115 (13%)

Query: 39  FLVWTMV------AATHIVYPLLQGWVMYVSLTSFLISLMFLLSYLFGFYKRFESWRVLD 92
           FLVWT+V      AA   +  +L  WV+       +  +M++  Y   + K    +  + 
Sbjct: 26  FLVWTVVYRQPGTAAMGGLAGVLALWVL-------VTHVMYMQDYWRTWLKGLRGFFFVG 78

Query: 93  SLYHGTTGILYMSAAVLQVHATIVSEKLLDPRIYYINSAASFFAFIATLLYILHA 147
            L+   +   + +  VL +      + L DP  YY++S  SF +F    L  L+A
Sbjct: 79  VLFSAVSIAAFCTFLVLAITR---HQSLTDPTSYYLSSVWSFISFKWAFLLSLYA 130


>gi|52353276 olfactory receptor, family 6, subfamily N, member 1
           [Homo sapiens]
          Length = 312

 Score = 31.2 bits (69), Expect = 0.36
 Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 16/115 (13%)

Query: 42  WTMVAATHIV-YPLLQGWVMYVSLTSFLISLMFLLSYLFGFYKRFESWRVLDSLYH---- 96
           W+ VA   I+ +P LQG  +Y+ L   LI LM +L  L  F       R+   +YH    
Sbjct: 6   WSQVAEFIILGFPHLQGVQIYLFLLLLLIYLMTVLGNLLIFLVVCLDSRLHTPMYHFVSI 65

Query: 97  -GTTGILYMSAAVLQVHATIVSEK--------LLDPRIYYINSAASFFAFIATLL 142
              + + Y +A + ++ A ++SEK        LL  +IY+ +S  +   ++ T +
Sbjct: 66  LSFSELGYTAATIPKMLANLLSEKKTISFSGCLL--QIYFFHSLGATECYLLTAM 118


>gi|93204873 G protein-coupled receptor 157 [Homo sapiens]
          Length = 335

 Score = 29.6 bits (65), Expect = 1.1
 Identities = 33/119 (27%), Positives = 49/119 (41%), Gaps = 18/119 (15%)

Query: 4   PDPPATSYAPSDVPSGVALFLTIPFAFFLPELIFGFLVWTMVAATHIVYPLLQGWVMYVS 63
           P PP T   PS+          +  +  L  L  G LV     ATH ++P L+     + 
Sbjct: 3   PSPPPTELVPSERA-------VVLLSCALSALGSGLLV-----ATHALWPDLRSRARRLL 50

Query: 64  LTSFLISLMFLLSYLFGFYKRF--ESWR-VLD---SLYHGTTGILYMSAAVLQVHATIV 116
           L   L  L+   SY +G  + F   SW  VL    S +  T+   +  A  L ++ +IV
Sbjct: 51  LFLSLADLLSAASYFYGVLQNFAGPSWDCVLQGALSTFANTSSFFWTVAIALYLYLSIV 109


>gi|67782317 solute carrier family 6 member 9 isoform 3 [Homo
           sapiens]
          Length = 633

 Score = 29.3 bits (64), Expect = 1.4
 Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 2/79 (2%)

Query: 22  LFLTIPFAFFLPELIFGFLVWTMVAATHIVYPLLQ--GWVMYVSLTSFLISLMFLLSYLF 79
           LF  I + F  P +IF  LV+T++    I Y   Q  GW + +     L S++ +  Y  
Sbjct: 497 LFFQICWRFVSPAIIFFILVFTVIQYQPITYNHYQYPGWAVAIGFLMALSSVLCIPLYAM 556

Query: 80  GFYKRFESWRVLDSLYHGT 98
               R +   +L  L + T
Sbjct: 557 FRLCRTDGDTLLQRLKNAT 575


>gi|67782315 solute carrier family 6 member 9 isoform 2 [Homo
           sapiens]
          Length = 706

 Score = 29.3 bits (64), Expect = 1.4
 Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 2/79 (2%)

Query: 22  LFLTIPFAFFLPELIFGFLVWTMVAATHIVYPLLQ--GWVMYVSLTSFLISLMFLLSYLF 79
           LF  I + F  P +IF  LV+T++    I Y   Q  GW + +     L S++ +  Y  
Sbjct: 570 LFFQICWRFVSPAIIFFILVFTVIQYQPITYNHYQYPGWAVAIGFLMALSSVLCIPLYAM 629

Query: 80  GFYKRFESWRVLDSLYHGT 98
               R +   +L  L + T
Sbjct: 630 FRLCRTDGDTLLQRLKNAT 648


>gi|67782313 solute carrier family 6 member 9 isoform 1 [Homo
           sapiens]
          Length = 652

 Score = 29.3 bits (64), Expect = 1.4
 Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 2/79 (2%)

Query: 22  LFLTIPFAFFLPELIFGFLVWTMVAATHIVYPLLQ--GWVMYVSLTSFLISLMFLLSYLF 79
           LF  I + F  P +IF  LV+T++    I Y   Q  GW + +     L S++ +  Y  
Sbjct: 516 LFFQICWRFVSPAIIFFILVFTVIQYQPITYNHYQYPGWAVAIGFLMALSSVLCIPLYAM 575

Query: 80  GFYKRFESWRVLDSLYHGT 98
               R +   +L  L + T
Sbjct: 576 FRLCRTDGDTLLQRLKNAT 594


>gi|147904264 asparagine-linked glycosylation 10 homolog (yeast,
           alpha-1,2-glucosyltransferase) [Homo sapiens]
          Length = 473

 Score = 29.3 bits (64), Expect = 1.4
 Identities = 27/121 (22%), Positives = 51/121 (42%), Gaps = 12/121 (9%)

Query: 12  APSDVPSGVALFLTIPFAFFLPELIFGFLVWTMVAATHIVYPLLQGWVMYVSLTSF---- 67
           +PS + + ++L       FF+  L+  FLVW    A   +    + +  YV    F    
Sbjct: 308 SPSKIKTFLSLVWKRRILFFVVTLVSVFLVWKFTYAHKYLLADNRHYTFYVWKRVFQRYE 367

Query: 68  LISLMFLLSYLFGFYKRFESWRVLDSLYHGTTGILYMSAAVLQVHATIVSEKLLDPRIYY 127
            +  + + +Y+F        W + DSL   +  I +     + +   IV +KLL+ R + 
Sbjct: 368 TVKYLLVPAYIFA------GWSIADSL--KSKSIFWNLMFFICLFTVIVPQKLLEFRYFI 419

Query: 128 I 128
           +
Sbjct: 420 L 420


>gi|194239733 solute carrier family 9 (sodium/hydrogen exchanger),
           isoform 3 [Homo sapiens]
          Length = 834

 Score = 28.9 bits (63), Expect = 1.8
 Identities = 18/62 (29%), Positives = 28/62 (45%)

Query: 15  DVPSGVALFLTIPFAFFLPELIFGFLVWTMVAATHIVYPLLQGWVMYVSLTSFLISLMFL 74
           D   G+  F  +     L  ++F FL+  +   T  V  +  G+V  +S  S+L S M  
Sbjct: 246 DCVKGIVSFFVVSLGGTLVGVVFAFLLSLVTRFTKHVRIIEPGFVFIISYLSYLTSEMLS 305

Query: 75  LS 76
           LS
Sbjct: 306 LS 307


>gi|82546841 chemokine-like factor superfamily 5 isoform c [Homo
          sapiens]
          Length = 125

 Score = 28.9 bits (63), Expect = 1.8
 Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 3/52 (5%)

Query: 38 GFLVWTMVAATHIVYPLLQGWV---MYVSLTSFLISLMFLLSYLFGFYKRFE 86
          G L+ T +A T I++      +   M  +L  F I+L FL  Y   +Y+RF+
Sbjct: 35 GILLETELALTLIIFICFTASISAYMAAALLEFFITLAFLFLYATQYYQRFD 86


>gi|42716275 CCR4-NOT transcription complex, subunit 1 isoform a [Homo
            sapiens]
          Length = 2376

 Score = 28.9 bits (63), Expect = 1.8
 Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 6/50 (12%)

Query: 53   PLLQGWVMYVSLTSFLISLMFLLSYLFGFYKRFESWRVLDSLYHGTTGIL 102
            P  +GW MY  L      L+ L  YL  F +  E  + +  LY GT  +L
Sbjct: 2056 PQQKGWPMYAQL------LIDLFKYLAPFLRNVELTKPMQILYKGTLRVL 2099


>gi|224994205 wolframin [Homo sapiens]
          Length = 890

 Score = 28.5 bits (62), Expect = 2.3
 Identities = 15/42 (35%), Positives = 23/42 (54%)

Query: 28  FAFFLPELIFGFLVWTMVAATHIVYPLLQGWVMYVSLTSFLI 69
           FAFF+P +IF     +MV  T  V+   + W  + +LT  L+
Sbjct: 341 FAFFIPLVIFYLSFISMVICTLKVFQDSKAWENFRTLTDLLL 382


>gi|224994203 wolframin [Homo sapiens]
          Length = 890

 Score = 28.5 bits (62), Expect = 2.3
 Identities = 15/42 (35%), Positives = 23/42 (54%)

Query: 28  FAFFLPELIFGFLVWTMVAATHIVYPLLQGWVMYVSLTSFLI 69
           FAFF+P +IF     +MV  T  V+   + W  + +LT  L+
Sbjct: 341 FAFFIPLVIFYLSFISMVICTLKVFQDSKAWENFRTLTDLLL 382


>gi|14277677 protocadherin gamma subfamily C, 3 isoform 2 precursor
           [Homo sapiens]
          Length = 863

 Score = 27.7 bits (60), Expect = 4.0
 Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 1/67 (1%)

Query: 61  YVSLTSFLISLMFLLSYLFGFYKRFESWRVLDSLYHGTTGILYMSAAVLQVHATIVSEKL 120
           Y+ L+  L+S+ F+++       +   W+    LY      LY +     +HA  V   L
Sbjct: 693 YLLLSLILVSVGFVVTVFGVIIFKVYKWKQSRDLYRAPVSSLYRTPGP-SLHADAVRGGL 751

Query: 121 LDPRIYY 127
           + P +Y+
Sbjct: 752 MSPHLYH 758


>gi|14277675 protocadherin gamma subfamily C, 3 isoform 1 precursor
           [Homo sapiens]
          Length = 934

 Score = 27.7 bits (60), Expect = 4.0
 Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 1/67 (1%)

Query: 61  YVSLTSFLISLMFLLSYLFGFYKRFESWRVLDSLYHGTTGILYMSAAVLQVHATIVSEKL 120
           Y+ L+  L+S+ F+++       +   W+    LY      LY +     +HA  V   L
Sbjct: 693 YLLLSLILVSVGFVVTVFGVIIFKVYKWKQSRDLYRAPVSSLYRTPGP-SLHADAVRGGL 751

Query: 121 LDPRIYY 127
           + P +Y+
Sbjct: 752 MSPHLYH 758


>gi|4502663 CD37 antigen isoform A [Homo sapiens]
          Length = 281

 Score = 27.3 bits (59), Expect = 5.2
 Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 10/96 (10%)

Query: 22  LFLTIPFAFFLPELIFGFLVWTMVAATHIV------YPLLQGWVMYVSLTSFLISLMFLL 75
           LF+   F F L  LIF F +W ++  T  V      +  LQ W   ++++      + LL
Sbjct: 15  LFVFNLFFFVLGSLIFCFGIWILIDKTSFVSFVGLAFVPLQIWSKVLAISGIFTMGIALL 74

Query: 76  SYLFGFYKRFESWRVLDSLYHGTTGILYMSAAVLQV 111
               G     +  R L  LY G   +L+ +   L +
Sbjct: 75  ----GCVGALKELRCLLGLYFGMLLLLFATQITLGI 106


>gi|31657096 chemokine-like factor superfamily 4 isoform 2 [Homo
           sapiens]
          Length = 208

 Score = 27.3 bits (59), Expect = 5.2
 Identities = 20/90 (22%), Positives = 42/90 (46%), Gaps = 11/90 (12%)

Query: 61  YVSLTSFLISLMFLLSYLFGFYKRFE--SWRVLDSLYHGTTGILYMSAAVLQVHATIVSE 118
           +VS ++F+++ + L+ +    + R    +W + D +  G +  L+  A+++         
Sbjct: 89  FVSCSAFVVTGVLLIMFSLNLHMRIPQINWNLTDLVNTGLSAFLFFIASIVLA------- 141

Query: 119 KLLDPRIYYINSAASFFAFIATLLYILHAF 148
             L+ R      AA  F F+AT  Y ++ F
Sbjct: 142 -ALNHRAG-AEIAAVIFGFLATAAYAVNTF 169


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.332    0.143    0.448 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,403,253
Number of Sequences: 37866
Number of extensions: 208504
Number of successful extensions: 853
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 822
Number of HSP's gapped (non-prelim): 45
length of query: 153
length of database: 18,247,518
effective HSP length: 93
effective length of query: 60
effective length of database: 14,725,980
effective search space: 883558800
effective search space used: 883558800
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 57 (26.6 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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