Guide to the Human Genome
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Name: ALG10 Sequence: fasta or formatted (473aa) NCBI GI: 147904264
Description:

asparagine-linked glycosylation 10 homolog (yeast, alpha-1,2-glucosyltransferase)

Referenced in:

Protein Composition and Structure
Protein Glycosylation
Potassium Channels

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         27           2
 C cysteine            2.7         13           1
 D aspartate           1.5          7           1
 E glutamate           3.0         14           1
 F phenylalanine      12.3         58           2
 G glycine             3.8         18           2
 H histidine           1.9          9           1
 I isoleucine          6.3         30           2
 K lysine              4.7         22           2
 L leucine            14.0         66           4
 M methionine          2.3         11           1
 N asparagine          3.2         15           1
 P proline             4.4         21           2
 Q glutamine           3.4         16           1
 R arginine            4.0         19           2
 S serine              7.2         34           2
 T threonine           4.9         23           2
 V valine              6.6         31           3
 W tryptophan          2.7         13           1
 Y tyrosine            5.5         26           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   asparagine-linked glycosylation 10 homolog (yeast, ... 
ALG10B                0.964   asparagine-linked glycosylation 10 homolog B 
OPN4                  0.015   opsin 4 isoform 2 
TAS2R60               0.011   taste receptor, type 2, member 60 
OR4F5                 0.011   olfactory receptor, family 4, subfamily F, member 5 ...
OR4F4                 0.011   olfactory receptor, family 4, subfamily F, member 4 ...
OR4F17                0.011   olfactory receptor, family 4, subfamily F, member 17...
OR5B3                 0.009   olfactory receptor, family 5, subfamily B, member 3 ...
TMEM175               0.009   transmembrane protein 175 
OR10H3                0.007   olfactory receptor, family 10, subfamily H, member 3 ...
OR4K15                0.006   olfactory receptor, family 4, subfamily K, member 15...
ABCB1                 0.005   ATP-binding cassette, subfamily B, member 1 
WDR17                 0.005   WD repeat domain 17 isoform 2 
WDR17                 0.005   WD repeat domain 17 isoform 1 
ZDHHC20               0.005   zinc finger, DHHC-type containing 20 
OR7A5                 0.005   olfactory receptor, family 7, subfamily A, member 5 [...
OR5B12                0.005   olfactory receptor, family 5, subfamily B, member 12...
OR10H5                0.005   olfactory receptor, family 10, subfamily H, member 5...
MALL                  0.004   mal, T-cell differentiation protein-like 
OR1F1                 0.004   olfactory receptor, family 1, subfamily F, member 1 [...
OR10H1                0.004   olfactory receptor, family 10, subfamily H, member 1 ...
OR2T5                 0.004   olfactory receptor, family 2, subfamily T, member 5 ...
OR2T29                0.004   olfactory receptor, family 2, subfamily T, member 29...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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