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Search of human proteins with 13129036
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|13129036 zinc finger protein 655 isoform b [Homo sapiens]
(181 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|145701019 zinc finger protein 655 isoform b [Homo sapiens] 367 e-102
gi|13129036 zinc finger protein 655 isoform b [Homo sapiens] 367 e-102
gi|145701017 zinc finger protein 655 isoform c [Homo sapiens] 135 2e-32
gi|58331262 zinc finger protein 655 isoform c [Homo sapiens] 135 2e-32
gi|145701015 zinc finger protein 655 isoform f [Homo sapiens] 96 1e-20
gi|145701021 zinc finger protein 655 isoform f [Homo sapiens] 96 1e-20
gi|28416427 zinc finger protein 655 isoform a [Homo sapiens] 94 8e-20
gi|58331264 zinc finger protein 655 isoform a [Homo sapiens] 94 8e-20
gi|122114649 zinc finger protein 3 isoform 1 [Homo sapiens] 93 1e-19
gi|122114641 zinc finger protein 3 isoform 2 [Homo sapiens] 93 1e-19
gi|31340735 zinc finger protein 445 [Homo sapiens] 82 3e-16
gi|31377839 zinc finger protein 606 [Homo sapiens] 80 1e-15
gi|157954634 zinc finger protein 34 [Homo sapiens] 78 4e-15
gi|68800230 zinc finger protein 197 isoform 2 [Homo sapiens] 77 6e-15
gi|11386193 zinc finger protein 197 isoform 1 [Homo sapiens] 75 3e-14
gi|72384335 zinc finger protein 311 [Homo sapiens] 75 4e-14
gi|116089280 zinc finger protein 436 [Homo sapiens] 73 1e-13
gi|24308299 zinc finger protein 436 [Homo sapiens] 73 1e-13
gi|38045956 zinc finger protein 19 [Homo sapiens] 73 1e-13
gi|62865881 zinc finger protein 2 isoform a [Homo sapiens] 73 2e-13
gi|109452595 zinc finger protein 205 [Homo sapiens] 72 3e-13
gi|109452593 zinc finger protein 205 [Homo sapiens] 72 3e-13
gi|32699015 zinc finger protein 454 [Homo sapiens] 72 3e-13
gi|93004100 zinc finger protein 642 [Homo sapiens] 70 8e-13
gi|37693525 zinc finger protein 189 isoform 1 [Homo sapiens] 70 8e-13
gi|21687264 zinc finger protein 558 [Homo sapiens] 70 1e-12
gi|188528626 zinc finger protein 8 [Homo sapiens] 70 1e-12
gi|124517687 zinc finger protein 560 [Homo sapiens] 70 1e-12
gi|195927047 zinc finger protein 286 [Homo sapiens] 69 2e-12
gi|10190686 zinc finger protein 286 [Homo sapiens] 69 2e-12
>gi|145701019 zinc finger protein 655 isoform b [Homo sapiens]
Length = 181
Score = 367 bits (943), Expect = e-102
Identities = 181/181 (100%), Positives = 181/181 (100%)
Query: 1 MEEIPAQEAAGSPRVQFQSLETQSECLSPEPQFVQDTDMEQGLTGAPPVPQVPALPREGS 60
MEEIPAQEAAGSPRVQFQSLETQSECLSPEPQFVQDTDMEQGLTGAPPVPQVPALPREGS
Sbjct: 1 MEEIPAQEAAGSPRVQFQSLETQSECLSPEPQFVQDTDMEQGLTGAPPVPQVPALPREGS 60
Query: 61 PGDQAAALLTARYQEFVTFEDVAVHLTREEWGYLDPVQRDLYREVMLENYGNVVSLGILL 120
PGDQAAALLTARYQEFVTFEDVAVHLTREEWGYLDPVQRDLYREVMLENYGNVVSLGILL
Sbjct: 61 PGDQAAALLTARYQEFVTFEDVAVHLTREEWGYLDPVQRDLYREVMLENYGNVVSLGILL 120
Query: 121 RLPTTRIHSVNSCPALSHTQASAFSGETLAVLTAGISKRWPKYRLPIDIARPCSETPFPR 180
RLPTTRIHSVNSCPALSHTQASAFSGETLAVLTAGISKRWPKYRLPIDIARPCSETPFPR
Sbjct: 121 RLPTTRIHSVNSCPALSHTQASAFSGETLAVLTAGISKRWPKYRLPIDIARPCSETPFPR 180
Query: 181 L 181
L
Sbjct: 181 L 181
>gi|13129036 zinc finger protein 655 isoform b [Homo sapiens]
Length = 181
Score = 367 bits (943), Expect = e-102
Identities = 181/181 (100%), Positives = 181/181 (100%)
Query: 1 MEEIPAQEAAGSPRVQFQSLETQSECLSPEPQFVQDTDMEQGLTGAPPVPQVPALPREGS 60
MEEIPAQEAAGSPRVQFQSLETQSECLSPEPQFVQDTDMEQGLTGAPPVPQVPALPREGS
Sbjct: 1 MEEIPAQEAAGSPRVQFQSLETQSECLSPEPQFVQDTDMEQGLTGAPPVPQVPALPREGS 60
Query: 61 PGDQAAALLTARYQEFVTFEDVAVHLTREEWGYLDPVQRDLYREVMLENYGNVVSLGILL 120
PGDQAAALLTARYQEFVTFEDVAVHLTREEWGYLDPVQRDLYREVMLENYGNVVSLGILL
Sbjct: 61 PGDQAAALLTARYQEFVTFEDVAVHLTREEWGYLDPVQRDLYREVMLENYGNVVSLGILL 120
Query: 121 RLPTTRIHSVNSCPALSHTQASAFSGETLAVLTAGISKRWPKYRLPIDIARPCSETPFPR 180
RLPTTRIHSVNSCPALSHTQASAFSGETLAVLTAGISKRWPKYRLPIDIARPCSETPFPR
Sbjct: 121 RLPTTRIHSVNSCPALSHTQASAFSGETLAVLTAGISKRWPKYRLPIDIARPCSETPFPR 180
Query: 181 L 181
L
Sbjct: 181 L 181
>gi|145701017 zinc finger protein 655 isoform c [Homo sapiens]
Length = 110
Score = 135 bits (340), Expect = 2e-32
Identities = 65/65 (100%), Positives = 65/65 (100%)
Query: 117 GILLRLPTTRIHSVNSCPALSHTQASAFSGETLAVLTAGISKRWPKYRLPIDIARPCSET 176
GILLRLPTTRIHSVNSCPALSHTQASAFSGETLAVLTAGISKRWPKYRLPIDIARPCSET
Sbjct: 46 GILLRLPTTRIHSVNSCPALSHTQASAFSGETLAVLTAGISKRWPKYRLPIDIARPCSET 105
Query: 177 PFPRL 181
PFPRL
Sbjct: 106 PFPRL 110
Score = 93.6 bits (231), Expect = 8e-20
Identities = 45/45 (100%), Positives = 45/45 (100%)
Query: 1 MEEIPAQEAAGSPRVQFQSLETQSECLSPEPQFVQDTDMEQGLTG 45
MEEIPAQEAAGSPRVQFQSLETQSECLSPEPQFVQDTDMEQGLTG
Sbjct: 1 MEEIPAQEAAGSPRVQFQSLETQSECLSPEPQFVQDTDMEQGLTG 45
>gi|58331262 zinc finger protein 655 isoform c [Homo sapiens]
Length = 110
Score = 135 bits (340), Expect = 2e-32
Identities = 65/65 (100%), Positives = 65/65 (100%)
Query: 117 GILLRLPTTRIHSVNSCPALSHTQASAFSGETLAVLTAGISKRWPKYRLPIDIARPCSET 176
GILLRLPTTRIHSVNSCPALSHTQASAFSGETLAVLTAGISKRWPKYRLPIDIARPCSET
Sbjct: 46 GILLRLPTTRIHSVNSCPALSHTQASAFSGETLAVLTAGISKRWPKYRLPIDIARPCSET 105
Query: 177 PFPRL 181
PFPRL
Sbjct: 106 PFPRL 110
Score = 93.6 bits (231), Expect = 8e-20
Identities = 45/45 (100%), Positives = 45/45 (100%)
Query: 1 MEEIPAQEAAGSPRVQFQSLETQSECLSPEPQFVQDTDMEQGLTG 45
MEEIPAQEAAGSPRVQFQSLETQSECLSPEPQFVQDTDMEQGLTG
Sbjct: 1 MEEIPAQEAAGSPRVQFQSLETQSECLSPEPQFVQDTDMEQGLTG 45
>gi|145701015 zinc finger protein 655 isoform f [Homo sapiens]
Length = 526
Score = 96.3 bits (238), Expect = 1e-20
Identities = 58/99 (58%), Positives = 67/99 (67%), Gaps = 3/99 (3%)
Query: 1 MEEIPAQEAAGSPRVQFQSLETQSECLSPEPQFVQDTDMEQGLTGAPPVPQVPALPREGS 60
MEEIPAQEAAGSPRVQFQSLETQSECLSPEPQFVQDTDMEQGLTG P+ + + +
Sbjct: 1 MEEIPAQEAAGSPRVQFQSLETQSECLSPEPQFVQDTDMEQGLTGGFPISKPDGISQ--L 58
Query: 61 PGDQAAALLTARYQEFVTFEDVAVHLTREEWGYLDPVQR 99
D L + +E V +D + TREE L P Q+
Sbjct: 59 EQDLQVFDLETKTRE-VLRDDCSDGETREENKLLIPKQK 96
>gi|145701021 zinc finger protein 655 isoform f [Homo sapiens]
Length = 526
Score = 96.3 bits (238), Expect = 1e-20
Identities = 58/99 (58%), Positives = 67/99 (67%), Gaps = 3/99 (3%)
Query: 1 MEEIPAQEAAGSPRVQFQSLETQSECLSPEPQFVQDTDMEQGLTGAPPVPQVPALPREGS 60
MEEIPAQEAAGSPRVQFQSLETQSECLSPEPQFVQDTDMEQGLTG P+ + + +
Sbjct: 1 MEEIPAQEAAGSPRVQFQSLETQSECLSPEPQFVQDTDMEQGLTGGFPISKPDGISQ--L 58
Query: 61 PGDQAAALLTARYQEFVTFEDVAVHLTREEWGYLDPVQR 99
D L + +E V +D + TREE L P Q+
Sbjct: 59 EQDLQVFDLETKTRE-VLRDDCSDGETREENKLLIPKQK 96
>gi|28416427 zinc finger protein 655 isoform a [Homo sapiens]
Length = 491
Score = 93.6 bits (231), Expect = 8e-20
Identities = 45/45 (100%), Positives = 45/45 (100%)
Query: 1 MEEIPAQEAAGSPRVQFQSLETQSECLSPEPQFVQDTDMEQGLTG 45
MEEIPAQEAAGSPRVQFQSLETQSECLSPEPQFVQDTDMEQGLTG
Sbjct: 1 MEEIPAQEAAGSPRVQFQSLETQSECLSPEPQFVQDTDMEQGLTG 45
>gi|58331264 zinc finger protein 655 isoform a [Homo sapiens]
Length = 491
Score = 93.6 bits (231), Expect = 8e-20
Identities = 45/45 (100%), Positives = 45/45 (100%)
Query: 1 MEEIPAQEAAGSPRVQFQSLETQSECLSPEPQFVQDTDMEQGLTG 45
MEEIPAQEAAGSPRVQFQSLETQSECLSPEPQFVQDTDMEQGLTG
Sbjct: 1 MEEIPAQEAAGSPRVQFQSLETQSECLSPEPQFVQDTDMEQGLTG 45
>gi|122114649 zinc finger protein 3 isoform 1 [Homo sapiens]
Length = 131
Score = 92.8 bits (229), Expect = 1e-19
Identities = 52/99 (52%), Positives = 67/99 (67%), Gaps = 11/99 (11%)
Query: 20 LETQSECLSPEPQFVQDTDMEQGLTGAPPVPQVPALPREGSPGDQ--AAALLTARYQEFV 77
+ETQ++ +S EPQ + D+ + +VPA + S GD+ AAALL A+ QE V
Sbjct: 1 METQADLVSQEPQALLDSALPS---------KVPAFSDKDSLGDEMLAAALLKAKSQELV 51
Query: 78 TFEDVAVHLTREEWGYLDPVQRDLYREVMLENYGNVVSL 116
TFEDVAV+ R+EW L+P QRDLYR+VMLENYGNV SL
Sbjct: 52 TFEDVAVYFIRKEWKRLEPAQRDLYRDVMLENYGNVFSL 90
>gi|122114641 zinc finger protein 3 isoform 2 [Homo sapiens]
Length = 446
Score = 92.8 bits (229), Expect = 1e-19
Identities = 52/99 (52%), Positives = 67/99 (67%), Gaps = 11/99 (11%)
Query: 20 LETQSECLSPEPQFVQDTDMEQGLTGAPPVPQVPALPREGSPGDQ--AAALLTARYQEFV 77
+ETQ++ +S EPQ + D+ + +VPA + S GD+ AAALL A+ QE V
Sbjct: 1 METQADLVSQEPQALLDSALPS---------KVPAFSDKDSLGDEMLAAALLKAKSQELV 51
Query: 78 TFEDVAVHLTREEWGYLDPVQRDLYREVMLENYGNVVSL 116
TFEDVAV+ R+EW L+P QRDLYR+VMLENYGNV SL
Sbjct: 52 TFEDVAVYFIRKEWKRLEPAQRDLYRDVMLENYGNVFSL 90
>gi|31340735 zinc finger protein 445 [Homo sapiens]
Length = 1031
Score = 82.0 bits (201), Expect = 3e-16
Identities = 42/72 (58%), Positives = 53/72 (73%), Gaps = 3/72 (4%)
Query: 48 PVPQVPAL-PREGSPGDQAAAL--LTARYQEFVTFEDVAVHLTREEWGYLDPVQRDLYRE 104
P Q+PAL PREG PGDQ LTA+ QE +TF+DV V +++EWG+LD QR+LYR+
Sbjct: 202 PAAQMPALFPREGCPGDQVTPTRSLTAQLQETMTFKDVEVTFSQDEWGWLDSAQRNLYRD 261
Query: 105 VMLENYGNVVSL 116
VMLENY N+ SL
Sbjct: 262 VMLENYRNMASL 273
>gi|31377839 zinc finger protein 606 [Homo sapiens]
Length = 792
Score = 79.7 bits (195), Expect = 1e-15
Identities = 47/95 (49%), Positives = 58/95 (61%), Gaps = 8/95 (8%)
Query: 37 TDMEQGLTGAPP------VPQVPALPREGS--PGDQAAALLTARYQEFVTFEDVAVHLTR 88
TD G+T P PQ PA EGS G +A L A+ QE VTF+DVAV T+
Sbjct: 14 TDQSWGMTAVDPWASWALCPQYPAWHVEGSLEEGRRATGLPAAQVQEPVTFKDVAVDFTQ 73
Query: 89 EEWGYLDPVQRDLYREVMLENYGNVVSLGILLRLP 123
EEWG LD VQR LYR+VMLE YG+++S+G + P
Sbjct: 74 EEWGQLDLVQRTLYRDVMLETYGHLLSVGNQIAKP 108
>gi|157954634 zinc finger protein 34 [Homo sapiens]
Length = 560
Score = 78.2 bits (191), Expect = 4e-15
Identities = 39/62 (62%), Positives = 47/62 (75%)
Query: 57 REGSPGDQAAALLTARYQEFVTFEDVAVHLTREEWGYLDPVQRDLYREVMLENYGNVVSL 116
R+ +P AA L+A Q VTFEDVAV+L+REEWG L P QR LYR+VMLE YGN+VSL
Sbjct: 15 RKPNPQAMAALFLSAPPQAEVTFEDVAVYLSREEWGRLGPAQRGLYRDVMLETYGNLVSL 74
Query: 117 GI 118
G+
Sbjct: 75 GV 76
>gi|68800230 zinc finger protein 197 isoform 2 [Homo sapiens]
Length = 267
Score = 77.4 bits (189), Expect = 6e-15
Identities = 41/72 (56%), Positives = 50/72 (69%), Gaps = 2/72 (2%)
Query: 48 PVPQVPALPREGSPGDQAAAL--LTARYQEFVTFEDVAVHLTREEWGYLDPVQRDLYREV 105
P P+ AL +E +P +Q AL LTA+ QE V FE+V+V T EEW L P+QR LY +V
Sbjct: 186 PAPEASALSQEENPRNQLMALMLLTAQPQELVMFEEVSVCFTSEEWACLGPIQRALYWDV 245
Query: 106 MLENYGNVVSLG 117
MLENYGNV SLG
Sbjct: 246 MLENYGNVTSLG 257
>gi|11386193 zinc finger protein 197 isoform 1 [Homo sapiens]
Length = 1029
Score = 75.1 bits (183), Expect = 3e-14
Identities = 40/71 (56%), Positives = 49/71 (69%), Gaps = 2/71 (2%)
Query: 48 PVPQVPALPREGSPGDQAAAL--LTARYQEFVTFEDVAVHLTREEWGYLDPVQRDLYREV 105
P P+ AL +E +P +Q AL LTA+ QE V FE+V+V T EEW L P+QR LY +V
Sbjct: 186 PAPEASALSQEENPRNQLMALMLLTAQPQELVMFEEVSVCFTSEEWACLGPIQRALYWDV 245
Query: 106 MLENYGNVVSL 116
MLENYGNV SL
Sbjct: 246 MLENYGNVTSL 256
>gi|72384335 zinc finger protein 311 [Homo sapiens]
Length = 666
Score = 74.7 bits (182), Expect = 4e-14
Identities = 46/96 (47%), Positives = 57/96 (59%), Gaps = 4/96 (4%)
Query: 35 QDTDMEQGLTGAPPVPQVPALPREGSPGD--QAAALLTARYQEFVTFEDVAVHLTREEWG 92
QDT + Q + P P PA ++GS G+ QA L ++ QE VTFEDVAV+ T EW
Sbjct: 22 QDTQLPQE-SALLPAPY-PAFTKDGSQGNLPQADITLMSQAQESVTFEDVAVNFTNREWQ 79
Query: 93 YLDPVQRDLYREVMLENYGNVVSLGILLRLPTTRIH 128
L QR LY++VMLENYGN+VSLG P H
Sbjct: 80 CLTYAQRHLYKDVMLENYGNMVSLGFPFPKPPLISH 115
>gi|116089280 zinc finger protein 436 [Homo sapiens]
Length = 470
Score = 73.2 bits (178), Expect = 1e-13
Identities = 38/57 (66%), Positives = 43/57 (75%)
Query: 65 AAALLTARYQEFVTFEDVAVHLTREEWGYLDPVQRDLYREVMLENYGNVVSLGILLR 121
AA LL A Q VTFED+A++LTREEW LD QRDLYR+VM ENYGNVVSL +R
Sbjct: 2 AATLLMAGSQAPVTFEDMAMYLTREEWRPLDAAQRDLYRDVMQENYGNVVSLDFEIR 58
>gi|24308299 zinc finger protein 436 [Homo sapiens]
Length = 470
Score = 73.2 bits (178), Expect = 1e-13
Identities = 38/57 (66%), Positives = 43/57 (75%)
Query: 65 AAALLTARYQEFVTFEDVAVHLTREEWGYLDPVQRDLYREVMLENYGNVVSLGILLR 121
AA LL A Q VTFED+A++LTREEW LD QRDLYR+VM ENYGNVVSL +R
Sbjct: 2 AATLLMAGSQAPVTFEDMAMYLTREEWRPLDAAQRDLYRDVMQENYGNVVSLDFEIR 58
>gi|38045956 zinc finger protein 19 [Homo sapiens]
Length = 458
Score = 73.2 bits (178), Expect = 1e-13
Identities = 35/53 (66%), Positives = 40/53 (75%)
Query: 65 AAALLTARYQEFVTFEDVAVHLTREEWGYLDPVQRDLYREVMLENYGNVVSLG 117
AA L A+YQE VTFEDVAVH T+ EW L P QR LYR VMLEN+GN+ +LG
Sbjct: 2 AAMPLKAQYQEMVTFEDVAVHFTKTEWTGLSPAQRALYRSVMLENFGNLTALG 54
>gi|62865881 zinc finger protein 2 isoform a [Homo sapiens]
Length = 425
Score = 72.8 bits (177), Expect = 2e-13
Identities = 37/59 (62%), Positives = 43/59 (72%)
Query: 65 AAALLTARYQEFVTFEDVAVHLTREEWGYLDPVQRDLYREVMLENYGNVVSLGILLRLP 123
AA T R QE VTFEDVAV T EEW L P+QRDLY+EVMLENY ++VSLG+ + P
Sbjct: 2 AAVSPTTRCQESVTFEDVAVVFTDEEWSRLVPIQRDLYKEVMLENYNSIVSLGLPVPQP 60
>gi|109452595 zinc finger protein 205 [Homo sapiens]
Length = 554
Score = 72.0 bits (175), Expect = 3e-13
Identities = 42/81 (51%), Positives = 54/81 (66%), Gaps = 4/81 (4%)
Query: 45 GAPPVPQVPALPREGSPGDQ--AAALLTARYQEFVTFEDVAVHLTREEWGYLDPVQRDLY 102
GA P P++P L REG D+ AAALLTA Q VTFEDVA++L+REEWG LD Q++ Y
Sbjct: 90 GALPSPRIPVLSREGRTRDRQMAAALLTAWSQMPVTFEDVALYLSREEWGRLDHTQQNFY 149
Query: 103 REVMLENYGNVVSLGILLRLP 123
R+V+ + G +SLG P
Sbjct: 150 RDVLQKKNG--LSLGFPFSRP 168
>gi|109452593 zinc finger protein 205 [Homo sapiens]
Length = 554
Score = 72.0 bits (175), Expect = 3e-13
Identities = 42/81 (51%), Positives = 54/81 (66%), Gaps = 4/81 (4%)
Query: 45 GAPPVPQVPALPREGSPGDQ--AAALLTARYQEFVTFEDVAVHLTREEWGYLDPVQRDLY 102
GA P P++P L REG D+ AAALLTA Q VTFEDVA++L+REEWG LD Q++ Y
Sbjct: 90 GALPSPRIPVLSREGRTRDRQMAAALLTAWSQMPVTFEDVALYLSREEWGRLDHTQQNFY 149
Query: 103 REVMLENYGNVVSLGILLRLP 123
R+V+ + G +SLG P
Sbjct: 150 RDVLQKKNG--LSLGFPFSRP 168
>gi|32699015 zinc finger protein 454 [Homo sapiens]
Length = 522
Score = 72.0 bits (175), Expect = 3e-13
Identities = 36/61 (59%), Positives = 43/61 (70%)
Query: 65 AAALLTARYQEFVTFEDVAVHLTREEWGYLDPVQRDLYREVMLENYGNVVSLGILLRLPT 124
A + L QE VTF+DVA+ T+EEWG L P QR LYR+VMLENY N+VSLG+L P
Sbjct: 2 AVSHLPTMVQESVTFKDVAILFTQEEWGQLSPAQRALYRDVMLENYSNLVSLGLLGPKPD 61
Query: 125 T 125
T
Sbjct: 62 T 62
>gi|93004100 zinc finger protein 642 [Homo sapiens]
Length = 526
Score = 70.5 bits (171), Expect = 8e-13
Identities = 33/68 (48%), Positives = 45/68 (66%)
Query: 57 REGSPGDQAAALLTARYQEFVTFEDVAVHLTREEWGYLDPVQRDLYREVMLENYGNVVSL 116
RE + L TA QE +TF+D+++ T+EEWG L P ++LYREVMLENY N+VS+
Sbjct: 56 RESLEDEVTPGLPTAESQELLTFKDISIDFTQEEWGQLAPAHQNLYREVMLENYSNLVSV 115
Query: 117 GILLRLPT 124
G L P+
Sbjct: 116 GYQLSKPS 123
>gi|37693525 zinc finger protein 189 isoform 1 [Homo sapiens]
Length = 626
Score = 70.5 bits (171), Expect = 8e-13
Identities = 31/45 (68%), Positives = 38/45 (84%)
Query: 77 VTFEDVAVHLTREEWGYLDPVQRDLYREVMLENYGNVVSLGILLR 121
+TFEDVAV T+EEW YLDP QR LY++VM+ENYGN+VSL +L R
Sbjct: 14 LTFEDVAVFFTQEEWDYLDPAQRSLYKDVMMENYGNLVSLDVLNR 58
>gi|21687264 zinc finger protein 558 [Homo sapiens]
Length = 402
Score = 70.1 bits (170), Expect = 1e-12
Identities = 39/81 (48%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Query: 46 APPVPQVPALPREGSP--GDQAAALLTARYQEFVTFEDVAVHLTREEWGYLDPVQRDLYR 103
A P PA ++G G+ LLT+ + VTFEDVAV T+EEW LDP QR LYR
Sbjct: 10 AAPSSLFPASQQKGHTQGGELVNELLTSWLRGLVTFEDVAVEFTQEEWALLDPAQRTLYR 69
Query: 104 EVMLENYGNVVSLGILLRLPT 124
+VMLEN N+ SLG + P+
Sbjct: 70 DVMLENCRNLASLGCRVNKPS 90
>gi|188528626 zinc finger protein 8 [Homo sapiens]
Length = 575
Score = 69.7 bits (169), Expect = 1e-12
Identities = 36/66 (54%), Positives = 44/66 (66%)
Query: 58 EGSPGDQAAALLTARYQEFVTFEDVAVHLTREEWGYLDPVQRDLYREVMLENYGNVVSLG 117
EG G + AR QE VTF DVAV T+EEWG LDP QR LYR+VMLE +G+++S+G
Sbjct: 6 EGVAGVMSVGPPAARLQEPVTFRDVAVDFTQEEWGQLDPTQRILYRDVMLETFGHLLSIG 65
Query: 118 ILLRLP 123
L P
Sbjct: 66 PELPKP 71
>gi|124517687 zinc finger protein 560 [Homo sapiens]
Length = 790
Score = 69.7 bits (169), Expect = 1e-12
Identities = 36/59 (61%), Positives = 41/59 (69%)
Query: 66 AALLTARYQEFVTFEDVAVHLTREEWGYLDPVQRDLYREVMLENYGNVVSLGILLRLPT 124
A LT YQ VTFED AV T+EEW LDPVQR+LYR+VMLENY NV +G L P+
Sbjct: 2 AYCLTNCYQYSVTFEDTAVDFTQEEWILLDPVQRNLYRDVMLENYENVAKVGFQLFKPS 60
Score = 60.1 bits (144), Expect = 1e-09
Identities = 28/50 (56%), Positives = 36/50 (72%)
Query: 75 EFVTFEDVAVHLTREEWGYLDPVQRDLYREVMLENYGNVVSLGILLRLPT 124
+ VTF+ VAV T+EEW LDP QR+LY +VMLENY N+ S+G L P+
Sbjct: 108 DLVTFDSVAVEFTQEEWTLLDPAQRNLYSDVMLENYKNLSSVGYQLFKPS 157
>gi|195927047 zinc finger protein 286 [Homo sapiens]
Length = 521
Score = 68.9 bits (167), Expect = 2e-12
Identities = 46/97 (47%), Positives = 55/97 (56%), Gaps = 17/97 (17%)
Query: 44 TGAPPVPQVPALPREGSP---------GDQAAALLTARYQEFVTFEDVAVHLTREEWGYL 94
T +P+ AL + SP G+ AA LTAR QE VTF+DVA+ T EEWG L
Sbjct: 3 TDLAEMPEKGALSSQDSPHFQEKSTEEGEVAALRLTARSQETVTFKDVAMDFTPEEWGKL 62
Query: 95 DPVQRDLYREVMLENYGNVVSLGILLRLPTTRIHSVN 131
DP QRD VMLENY N+VSL LP ++ S N
Sbjct: 63 DPAQRD----VMLENYRNLVSLW----LPVSKPESYN 91
>gi|10190686 zinc finger protein 286 [Homo sapiens]
Length = 521
Score = 68.9 bits (167), Expect = 2e-12
Identities = 46/97 (47%), Positives = 55/97 (56%), Gaps = 17/97 (17%)
Query: 44 TGAPPVPQVPALPREGSP---------GDQAAALLTARYQEFVTFEDVAVHLTREEWGYL 94
T +P+ AL + SP G+ AA LTAR QE VTF+DVA+ T EEWG L
Sbjct: 3 TDLAEMPEKGALSSQDSPHFQEKSTEEGEVAALRLTARSQETVTFKDVAMDFTPEEWGKL 62
Query: 95 DPVQRDLYREVMLENYGNVVSLGILLRLPTTRIHSVN 131
DP QRD VMLENY N+VSL LP ++ S N
Sbjct: 63 DPAQRD----VMLENYRNLVSLW----LPVSKPESYN 91
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.133 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,754,997
Number of Sequences: 37866
Number of extensions: 370502
Number of successful extensions: 2180
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 545
Number of HSP's successfully gapped in prelim test: 48
Number of HSP's that attempted gapping in prelim test: 1589
Number of HSP's gapped (non-prelim): 622
length of query: 181
length of database: 18,247,518
effective HSP length: 96
effective length of query: 85
effective length of database: 14,612,382
effective search space: 1242052470
effective search space used: 1242052470
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.