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Search of human proteins with 4505999
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4505999 protein phosphatase 1G [Homo sapiens]
(546 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4505999 protein phosphatase 1G [Homo sapiens] 1100 0.0
gi|29826282 protein phosphatase 1G [Homo sapiens] 1100 0.0
gi|29557855 protein phosphatase 1A isoform 2 [Homo sapiens] 134 2e-31
gi|10337595 protein phosphatase 1A isoform 1 [Homo sapiens] 130 2e-30
gi|193211600 protein phosphatase 1A isoform 3 [Homo sapiens] 130 2e-30
gi|75813620 protein phosphatase 1B isoform 5 [Homo sapiens] 128 2e-29
gi|29558022 protein phosphatase 1B isoform 2 [Homo sapiens] 128 2e-29
gi|4505995 protein phosphatase 1B isoform 1 [Homo sapiens] 128 2e-29
gi|75813618 protein phosphatase 1B isoform 4 [Homo sapiens] 126 4e-29
gi|122937199 protein phosphatase 1B-like [Homo sapiens] 114 3e-25
gi|63003905 protein phosphatase 1 (formerly 2C)-like [Homo sapiens] 100 3e-21
gi|7661862 protein phosphatase 1F [Homo sapiens] 92 2e-18
gi|30089948 protein phosphatase 1E [Homo sapiens] 91 4e-18
gi|13540531 integrin-linked kinase-associated protein phosphatas... 89 1e-17
gi|167466276 protein phosphatase 1K (PP2C domain containing) [Ho... 84 4e-16
gi|4505997 protein phosphatase 1D [Homo sapiens] 70 6e-12
gi|4503257 death-domain associated protein isoform a [Homo sapiens] 66 9e-11
gi|215422388 death-domain associated protein isoform a [Homo sap... 66 9e-11
gi|215422366 death-domain associated protein isoform b [Homo sap... 66 9e-11
gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Hom... 65 2e-10
gi|17975763 myelin transcription factor 1 [Homo sapiens] 64 3e-10
gi|115529449 upstream binding transcription factor, RNA polymera... 64 3e-10
gi|115529451 upstream binding transcription factor, RNA polymera... 64 3e-10
gi|7657671 upstream binding transcription factor, RNA polymerase... 64 3e-10
gi|41349497 pyruvate dehydrogenase phosphatase isoenzyme 2 [Homo... 62 2e-09
gi|38788260 bromodomain PHD finger transcription factor isoform ... 62 2e-09
gi|38788274 bromodomain PHD finger transcription factor isoform ... 62 2e-09
gi|4759128 solute carrier family 24 (sodium/potassium/calcium ex... 62 2e-09
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 62 2e-09
gi|55956788 nucleolin [Homo sapiens] 60 4e-09
>gi|4505999 protein phosphatase 1G [Homo sapiens]
Length = 546
Score = 1100 bits (2845), Expect = 0.0
Identities = 546/546 (100%), Positives = 546/546 (100%)
Query: 1 MGAYLSQPNTVKCSGDGVGAPRLPLPYGFSAMQGWRVSMEDAHNCIPELDSETAMFSVYD 60
MGAYLSQPNTVKCSGDGVGAPRLPLPYGFSAMQGWRVSMEDAHNCIPELDSETAMFSVYD
Sbjct: 1 MGAYLSQPNTVKCSGDGVGAPRLPLPYGFSAMQGWRVSMEDAHNCIPELDSETAMFSVYD 60
Query: 61 GHGGEEVALYCAKYLPDIIKDQKAYKEGKLQKALEDAFLAIDAKLTTEEVIKELAQIAGR 120
GHGGEEVALYCAKYLPDIIKDQKAYKEGKLQKALEDAFLAIDAKLTTEEVIKELAQIAGR
Sbjct: 61 GHGGEEVALYCAKYLPDIIKDQKAYKEGKLQKALEDAFLAIDAKLTTEEVIKELAQIAGR 120
Query: 121 PTEDEDEKEKVADEDDVDNEEAALLHEEATMTIEELLTRYGQNCHKGPPHSKSGGGTGEE 180
PTEDEDEKEKVADEDDVDNEEAALLHEEATMTIEELLTRYGQNCHKGPPHSKSGGGTGEE
Sbjct: 121 PTEDEDEKEKVADEDDVDNEEAALLHEEATMTIEELLTRYGQNCHKGPPHSKSGGGTGEE 180
Query: 181 PGSQGLNGEAGPEDSTRETPSQENGPTAKAYTGFSSNSERGTEAGQVGEPGIPTGEAGPS 240
PGSQGLNGEAGPEDSTRETPSQENGPTAKAYTGFSSNSERGTEAGQVGEPGIPTGEAGPS
Sbjct: 181 PGSQGLNGEAGPEDSTRETPSQENGPTAKAYTGFSSNSERGTEAGQVGEPGIPTGEAGPS 240
Query: 241 CSSASDKLPRVAKSKFFEDSEDESDEAEEEEEDSEECSEEEDGYSSEEAENEEDEDDTEE 300
CSSASDKLPRVAKSKFFEDSEDESDEAEEEEEDSEECSEEEDGYSSEEAENEEDEDDTEE
Sbjct: 241 CSSASDKLPRVAKSKFFEDSEDESDEAEEEEEDSEECSEEEDGYSSEEAENEEDEDDTEE 300
Query: 301 AEEDDEEEEEEMMVPGMEGKEEPGSDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKAL 360
AEEDDEEEEEEMMVPGMEGKEEPGSDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKAL
Sbjct: 301 AEEDDEEEEEEMMVPGMEGKEEPGSDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKAL 360
Query: 361 DMSYDHKPEDEVELARIKNAGGKVTMDGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISA 420
DMSYDHKPEDEVELARIKNAGGKVTMDGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISA
Sbjct: 361 DMSYDHKPEDEVELARIKNAGGKVTMDGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISA 420
Query: 421 LPDIKVLTLTDDHEFMVIACDGIWNVMSSQEVVDFIQSKISQRDENGELRLLSSIVEELL 480
LPDIKVLTLTDDHEFMVIACDGIWNVMSSQEVVDFIQSKISQRDENGELRLLSSIVEELL
Sbjct: 421 LPDIKVLTLTDDHEFMVIACDGIWNVMSSQEVVDFIQSKISQRDENGELRLLSSIVEELL 480
Query: 481 DQCLAPDTSGDGTGCDNMTCIIICFKPRNTAELQPESGKRKLEEVLSTEGAEENGNSDKK 540
DQCLAPDTSGDGTGCDNMTCIIICFKPRNTAELQPESGKRKLEEVLSTEGAEENGNSDKK
Sbjct: 481 DQCLAPDTSGDGTGCDNMTCIIICFKPRNTAELQPESGKRKLEEVLSTEGAEENGNSDKK 540
Query: 541 KKAKRD 546
KKAKRD
Sbjct: 541 KKAKRD 546
>gi|29826282 protein phosphatase 1G [Homo sapiens]
Length = 546
Score = 1100 bits (2845), Expect = 0.0
Identities = 546/546 (100%), Positives = 546/546 (100%)
Query: 1 MGAYLSQPNTVKCSGDGVGAPRLPLPYGFSAMQGWRVSMEDAHNCIPELDSETAMFSVYD 60
MGAYLSQPNTVKCSGDGVGAPRLPLPYGFSAMQGWRVSMEDAHNCIPELDSETAMFSVYD
Sbjct: 1 MGAYLSQPNTVKCSGDGVGAPRLPLPYGFSAMQGWRVSMEDAHNCIPELDSETAMFSVYD 60
Query: 61 GHGGEEVALYCAKYLPDIIKDQKAYKEGKLQKALEDAFLAIDAKLTTEEVIKELAQIAGR 120
GHGGEEVALYCAKYLPDIIKDQKAYKEGKLQKALEDAFLAIDAKLTTEEVIKELAQIAGR
Sbjct: 61 GHGGEEVALYCAKYLPDIIKDQKAYKEGKLQKALEDAFLAIDAKLTTEEVIKELAQIAGR 120
Query: 121 PTEDEDEKEKVADEDDVDNEEAALLHEEATMTIEELLTRYGQNCHKGPPHSKSGGGTGEE 180
PTEDEDEKEKVADEDDVDNEEAALLHEEATMTIEELLTRYGQNCHKGPPHSKSGGGTGEE
Sbjct: 121 PTEDEDEKEKVADEDDVDNEEAALLHEEATMTIEELLTRYGQNCHKGPPHSKSGGGTGEE 180
Query: 181 PGSQGLNGEAGPEDSTRETPSQENGPTAKAYTGFSSNSERGTEAGQVGEPGIPTGEAGPS 240
PGSQGLNGEAGPEDSTRETPSQENGPTAKAYTGFSSNSERGTEAGQVGEPGIPTGEAGPS
Sbjct: 181 PGSQGLNGEAGPEDSTRETPSQENGPTAKAYTGFSSNSERGTEAGQVGEPGIPTGEAGPS 240
Query: 241 CSSASDKLPRVAKSKFFEDSEDESDEAEEEEEDSEECSEEEDGYSSEEAENEEDEDDTEE 300
CSSASDKLPRVAKSKFFEDSEDESDEAEEEEEDSEECSEEEDGYSSEEAENEEDEDDTEE
Sbjct: 241 CSSASDKLPRVAKSKFFEDSEDESDEAEEEEEDSEECSEEEDGYSSEEAENEEDEDDTEE 300
Query: 301 AEEDDEEEEEEMMVPGMEGKEEPGSDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKAL 360
AEEDDEEEEEEMMVPGMEGKEEPGSDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKAL
Sbjct: 301 AEEDDEEEEEEMMVPGMEGKEEPGSDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKAL 360
Query: 361 DMSYDHKPEDEVELARIKNAGGKVTMDGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISA 420
DMSYDHKPEDEVELARIKNAGGKVTMDGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISA
Sbjct: 361 DMSYDHKPEDEVELARIKNAGGKVTMDGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISA 420
Query: 421 LPDIKVLTLTDDHEFMVIACDGIWNVMSSQEVVDFIQSKISQRDENGELRLLSSIVEELL 480
LPDIKVLTLTDDHEFMVIACDGIWNVMSSQEVVDFIQSKISQRDENGELRLLSSIVEELL
Sbjct: 421 LPDIKVLTLTDDHEFMVIACDGIWNVMSSQEVVDFIQSKISQRDENGELRLLSSIVEELL 480
Query: 481 DQCLAPDTSGDGTGCDNMTCIIICFKPRNTAELQPESGKRKLEEVLSTEGAEENGNSDKK 540
DQCLAPDTSGDGTGCDNMTCIIICFKPRNTAELQPESGKRKLEEVLSTEGAEENGNSDKK
Sbjct: 481 DQCLAPDTSGDGTGCDNMTCIIICFKPRNTAELQPESGKRKLEEVLSTEGAEENGNSDKK 540
Query: 541 KKAKRD 546
KKAKRD
Sbjct: 541 KKAKRD 546
>gi|29557855 protein phosphatase 1A isoform 2 [Homo sapiens]
Length = 324
Score = 134 bits (337), Expect = 2e-31
Identities = 86/235 (36%), Positives = 131/235 (55%), Gaps = 18/235 (7%)
Query: 307 EEEEEMMVPGMEGKEEPGSDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDH 366
E +E M V M K+ SG+TAV LI + N GDSR ++ K + DH
Sbjct: 107 EIDEHMRV--MSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDH 164
Query: 367 KPEDEVELARIKNAGGKVTMDGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKV 426
KP + +E RI+NAGG V M RVNG L +SRA+GD YK P EQ++S P++
Sbjct: 165 KPSNPLEKERIQNAGGSV-MIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHD 223
Query: 427 LTLT-DDHEFMVIACDGIWNVMSSQEVVDFIQSKISQRDENGELRLLSSIVEELLDQCLA 485
+ + +D +F+++ACDGIW+VM ++E+ DF++S++ D+ L + E++D CL
Sbjct: 224 IERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDD------LEKVCNEVVDTCLY 277
Query: 486 PDTSGDGTGCDNMTCIIICFKPRNTAELQPESGKRKLEEVLSTEGAEENGNSDKK 540
+ DNM+ I+ICF N ++ PE+ K++ E E E G+ +KK
Sbjct: 278 KGSR------DNMSVILICFP--NAPKVSPEAVKKEAELDKYLECRVEGGSFNKK 324
Score = 75.9 bits (185), Expect = 9e-14
Identities = 47/129 (36%), Positives = 65/129 (50%), Gaps = 13/129 (10%)
Query: 1 MGAYLSQPNTVKCSGDGVGAPRLPLPYGFSAMQGWRVSMEDAHNCIPELDS---ETAMFS 57
MGA+L +P K + G G L YG S+MQGWRV MEDAH + L S + F+
Sbjct: 1 MGAFLDKPKMEKHNAQGQGNG---LRYGLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFA 57
Query: 58 VYDGHGGEEVALYCAKYLPDIIKDQKAYKEG-------KLQKALEDAFLAIDAKLTTEEV 110
VYDGH G +VA YC ++L D I + + +K ++ + FL ID +
Sbjct: 58 VYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSE 117
Query: 111 IKELAQIAG 119
K A +G
Sbjct: 118 KKHGADRSG 126
>gi|10337595 protein phosphatase 1A isoform 1 [Homo sapiens]
Length = 382
Score = 130 bits (328), Expect = 2e-30
Identities = 81/218 (37%), Positives = 124/218 (56%), Gaps = 18/218 (8%)
Query: 307 EEEEEMMVPGMEGKEEPGSDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDH 366
E +E M V M K+ SG+TAV LI + N GDSR ++ K + DH
Sbjct: 107 EIDEHMRV--MSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDH 164
Query: 367 KPEDEVELARIKNAGGKVTMDGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKV 426
KP + +E RI+NAGG V M RVNG L +SRA+GD YK P EQ++S P++
Sbjct: 165 KPSNPLEKERIQNAGGSV-MIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHD 223
Query: 427 LTLT-DDHEFMVIACDGIWNVMSSQEVVDFIQSKISQRDENGELRLLSSIVEELLDQCLA 485
+ + +D +F+++ACDGIW+VM ++E+ DF++S++ D+ L + E++D CL
Sbjct: 224 IERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDD------LEKVCNEVVDTCLY 277
Query: 486 PDTSGDGTGCDNMTCIIICFKPRNTAELQPESGKRKLE 523
+ DNM+ I+ICF N ++ PE+ K++ E
Sbjct: 278 KGSR------DNMSVILICFP--NAPKVSPEAVKKEAE 307
Score = 75.9 bits (185), Expect = 9e-14
Identities = 47/129 (36%), Positives = 65/129 (50%), Gaps = 13/129 (10%)
Query: 1 MGAYLSQPNTVKCSGDGVGAPRLPLPYGFSAMQGWRVSMEDAHNCIPELDS---ETAMFS 57
MGA+L +P K + G G L YG S+MQGWRV MEDAH + L S + F+
Sbjct: 1 MGAFLDKPKMEKHNAQGQGNG---LRYGLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFA 57
Query: 58 VYDGHGGEEVALYCAKYLPDIIKDQKAYKEG-------KLQKALEDAFLAIDAKLTTEEV 110
VYDGH G +VA YC ++L D I + + +K ++ + FL ID +
Sbjct: 58 VYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSE 117
Query: 111 IKELAQIAG 119
K A +G
Sbjct: 118 KKHGADRSG 126
>gi|193211600 protein phosphatase 1A isoform 3 [Homo sapiens]
Length = 455
Score = 130 bits (328), Expect = 2e-30
Identities = 81/218 (37%), Positives = 124/218 (56%), Gaps = 18/218 (8%)
Query: 307 EEEEEMMVPGMEGKEEPGSDSGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDH 366
E +E M V M K+ SG+TAV LI + N GDSR ++ K + DH
Sbjct: 180 EIDEHMRV--MSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDH 237
Query: 367 KPEDEVELARIKNAGGKVTMDGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKV 426
KP + +E RI+NAGG V M RVNG L +SRA+GD YK P EQ++S P++
Sbjct: 238 KPSNPLEKERIQNAGGSV-MIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHD 296
Query: 427 LTLT-DDHEFMVIACDGIWNVMSSQEVVDFIQSKISQRDENGELRLLSSIVEELLDQCLA 485
+ + +D +F+++ACDGIW+VM ++E+ DF++S++ D+ L + E++D CL
Sbjct: 297 IERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDD------LEKVCNEVVDTCLY 350
Query: 486 PDTSGDGTGCDNMTCIIICFKPRNTAELQPESGKRKLE 523
+ DNM+ I+ICF N ++ PE+ K++ E
Sbjct: 351 KGSR------DNMSVILICFP--NAPKVSPEAVKKEAE 380
Score = 75.9 bits (185), Expect = 9e-14
Identities = 47/129 (36%), Positives = 65/129 (50%), Gaps = 13/129 (10%)
Query: 1 MGAYLSQPNTVKCSGDGVGAPRLPLPYGFSAMQGWRVSMEDAHNCIPELDS---ETAMFS 57
MGA+L +P K + G G L YG S+MQGWRV MEDAH + L S + F+
Sbjct: 74 MGAFLDKPKMEKHNAQGQGNG---LRYGLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFA 130
Query: 58 VYDGHGGEEVALYCAKYLPDIIKDQKAYKEG-------KLQKALEDAFLAIDAKLTTEEV 110
VYDGH G +VA YC ++L D I + + +K ++ + FL ID +
Sbjct: 131 VYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSE 190
Query: 111 IKELAQIAG 119
K A +G
Sbjct: 191 KKHGADRSG 199
>gi|75813620 protein phosphatase 1B isoform 5 [Homo sapiens]
Length = 380
Score = 128 bits (321), Expect = 2e-29
Identities = 73/216 (33%), Positives = 123/216 (56%), Gaps = 25/216 (11%)
Query: 327 SGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTM 386
SG+TAV +I K + N GDSR V+ G+ + DHKP + E RI+NAGG V +
Sbjct: 130 SGSTAVGVMISPKHIYFINCGDSRAVLYRNGQVCFSTQDHKPCNPREKERIQNAGGSVMI 189
Query: 387 DGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIWNV 446
RVNG L +SRA+GD+ YK P EQ++S P++ + ++ EF+++ACDGIW+V
Sbjct: 190 Q-RVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILACDGIWDV 248
Query: 447 MSSQEVVDFIQSKISQRDENGELRLLSSIVEELLDQCLAPDTSGDGTGCDNMTCIIICFK 506
MS++E+ ++++S++ D+ L ++ ++D CL + DNM+ +++CF
Sbjct: 249 MSNEELCEYVKSRLEVSDD------LENVCNWVVDTCLHKGSR------DNMSIVLVCFS 296
Query: 507 PRNTAELQPESGKR----------KLEEVLSTEGAE 532
N ++ E+ K+ ++EE++ G E
Sbjct: 297 --NAPKVSDEAVKKDSELDKHLESRVEEIMEKSGEE 330
Score = 75.1 bits (183), Expect = 2e-13
Identities = 44/99 (44%), Positives = 57/99 (57%), Gaps = 7/99 (7%)
Query: 1 MGAYLSQPNTVKCSGDGVGAPRLPLPYGFSAMQGWRVSMEDAHNC---IPELDSETAMFS 57
MGA+L +P T K + G G L YG S+MQGWRV MEDAH IP + + F+
Sbjct: 1 MGAFLDKPKTEKHNAHGAGNG---LRYGLSSMQGWRVEMEDAHTAVVGIPHGLEDWSFFA 57
Query: 58 VYDGHGGEEVALYCAKYLPDIIKDQKAYK-EGKLQKALE 95
VYDGH G VA YC+ +L + I + ++ GK ALE
Sbjct: 58 VYDGHAGSRVANYCSTHLLEHITTNEDFRAAGKSGSALE 96
>gi|29558022 protein phosphatase 1B isoform 2 [Homo sapiens]
Length = 387
Score = 128 bits (321), Expect = 2e-29
Identities = 73/216 (33%), Positives = 123/216 (56%), Gaps = 25/216 (11%)
Query: 327 SGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTM 386
SG+TAV +I K + N GDSR V+ G+ + DHKP + E RI+NAGG V +
Sbjct: 130 SGSTAVGVMISPKHIYFINCGDSRAVLYRNGQVCFSTQDHKPCNPREKERIQNAGGSVMI 189
Query: 387 DGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIWNV 446
RVNG L +SRA+GD+ YK P EQ++S P++ + ++ EF+++ACDGIW+V
Sbjct: 190 Q-RVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILACDGIWDV 248
Query: 447 MSSQEVVDFIQSKISQRDENGELRLLSSIVEELLDQCLAPDTSGDGTGCDNMTCIIICFK 506
MS++E+ ++++S++ D+ L ++ ++D CL + DNM+ +++CF
Sbjct: 249 MSNEELCEYVKSRLEVSDD------LENVCNWVVDTCLHKGSR------DNMSIVLVCFS 296
Query: 507 PRNTAELQPESGKR----------KLEEVLSTEGAE 532
N ++ E+ K+ ++EE++ G E
Sbjct: 297 --NAPKVSDEAVKKDSELDKHLESRVEEIMEKSGEE 330
Score = 75.1 bits (183), Expect = 2e-13
Identities = 44/99 (44%), Positives = 57/99 (57%), Gaps = 7/99 (7%)
Query: 1 MGAYLSQPNTVKCSGDGVGAPRLPLPYGFSAMQGWRVSMEDAHNC---IPELDSETAMFS 57
MGA+L +P T K + G G L YG S+MQGWRV MEDAH IP + + F+
Sbjct: 1 MGAFLDKPKTEKHNAHGAGNG---LRYGLSSMQGWRVEMEDAHTAVVGIPHGLEDWSFFA 57
Query: 58 VYDGHGGEEVALYCAKYLPDIIKDQKAYK-EGKLQKALE 95
VYDGH G VA YC+ +L + I + ++ GK ALE
Sbjct: 58 VYDGHAGSRVANYCSTHLLEHITTNEDFRAAGKSGSALE 96
>gi|4505995 protein phosphatase 1B isoform 1 [Homo sapiens]
Length = 479
Score = 128 bits (321), Expect = 2e-29
Identities = 73/216 (33%), Positives = 123/216 (56%), Gaps = 25/216 (11%)
Query: 327 SGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTM 386
SG+TAV +I K + N GDSR V+ G+ + DHKP + E RI+NAGG V +
Sbjct: 130 SGSTAVGVMISPKHIYFINCGDSRAVLYRNGQVCFSTQDHKPCNPREKERIQNAGGSVMI 189
Query: 387 DGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIWNV 446
RVNG L +SRA+GD+ YK P EQ++S P++ + ++ EF+++ACDGIW+V
Sbjct: 190 Q-RVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILACDGIWDV 248
Query: 447 MSSQEVVDFIQSKISQRDENGELRLLSSIVEELLDQCLAPDTSGDGTGCDNMTCIIICFK 506
MS++E+ ++++S++ D+ L ++ ++D CL + DNM+ +++CF
Sbjct: 249 MSNEELCEYVKSRLEVSDD------LENVCNWVVDTCLHKGSR------DNMSIVLVCFS 296
Query: 507 PRNTAELQPESGKR----------KLEEVLSTEGAE 532
N ++ E+ K+ ++EE++ G E
Sbjct: 297 --NAPKVSDEAVKKDSELDKHLESRVEEIMEKSGEE 330
Score = 75.1 bits (183), Expect = 2e-13
Identities = 44/99 (44%), Positives = 57/99 (57%), Gaps = 7/99 (7%)
Query: 1 MGAYLSQPNTVKCSGDGVGAPRLPLPYGFSAMQGWRVSMEDAHNC---IPELDSETAMFS 57
MGA+L +P T K + G G L YG S+MQGWRV MEDAH IP + + F+
Sbjct: 1 MGAFLDKPKTEKHNAHGAGNG---LRYGLSSMQGWRVEMEDAHTAVVGIPHGLEDWSFFA 57
Query: 58 VYDGHGGEEVALYCAKYLPDIIKDQKAYK-EGKLQKALE 95
VYDGH G VA YC+ +L + I + ++ GK ALE
Sbjct: 58 VYDGHAGSRVANYCSTHLLEHITTNEDFRAAGKSGSALE 96
>gi|75813618 protein phosphatase 1B isoform 4 [Homo sapiens]
Length = 327
Score = 126 bits (317), Expect = 4e-29
Identities = 70/197 (35%), Positives = 116/197 (58%), Gaps = 15/197 (7%)
Query: 327 SGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTM 386
SG+TAV +I K + N GDSR V+ G+ + DHKP + E RI+NAGG V +
Sbjct: 130 SGSTAVGVMISPKHIYFINCGDSRAVLYRNGQVCFSTQDHKPCNPREKERIQNAGGSVMI 189
Query: 387 DGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIWNV 446
RVNG L +SRA+GD+ YK P EQ++S P++ + ++ EF+++ACDGIW+V
Sbjct: 190 Q-RVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILACDGIWDV 248
Query: 447 MSSQEVVDFIQSKISQRDENGELRLLSSIVEELLDQCLAPDTSGDGTGCDNMTCIIICFK 506
MS++E+ ++++S++ D+ L ++ ++D CL + DNM+ +++CF
Sbjct: 249 MSNEELCEYVKSRLEVSDD------LENVCNWVVDTCLHKGSR------DNMSIVLVCFS 296
Query: 507 PRNTAELQPESGKRKLE 523
N ++ E+ K+ E
Sbjct: 297 --NAPKVSDEAVKKDSE 311
Score = 75.1 bits (183), Expect = 2e-13
Identities = 44/99 (44%), Positives = 57/99 (57%), Gaps = 7/99 (7%)
Query: 1 MGAYLSQPNTVKCSGDGVGAPRLPLPYGFSAMQGWRVSMEDAHNC---IPELDSETAMFS 57
MGA+L +P T K + G G L YG S+MQGWRV MEDAH IP + + F+
Sbjct: 1 MGAFLDKPKTEKHNAHGAGNG---LRYGLSSMQGWRVEMEDAHTAVVGIPHGLEDWSFFA 57
Query: 58 VYDGHGGEEVALYCAKYLPDIIKDQKAYK-EGKLQKALE 95
VYDGH G VA YC+ +L + I + ++ GK ALE
Sbjct: 58 VYDGHAGSRVANYCSTHLLEHITTNEDFRAAGKSGSALE 96
>gi|122937199 protein phosphatase 1B-like [Homo sapiens]
Length = 430
Score = 114 bits (284), Expect = 3e-25
Identities = 71/188 (37%), Positives = 102/188 (54%), Gaps = 17/188 (9%)
Query: 328 GTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTMD 387
G TAVV L+ + L +A+ GDSR V+S AG + DH+P E RI AGG +
Sbjct: 162 GCTAVVLLVSPRFLYLAHCGDSRAVLSRAGAVAFSTEDHRPLRPRERERIHAAGGTIRRR 221
Query: 388 GRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIWNVM 447
RV G L +SRA+GD YK PPE Q++SA P++ L + EFM++A DG+W+ +
Sbjct: 222 -RVEGSLAVSRALGDFTYKEAPGRPPELQLVSAEPEVAALARQAEDEFMLLASDGVWDTV 280
Query: 448 SSQEVVDFIQSKISQRDENGELRLLSSIV-EELLDQCLAPDTSGDGTGCDNMTCIIICF- 505
S + + S++ L L ++ +LLD CL + DNMTCI++CF
Sbjct: 281 SGAALAGLVASRL-------RLGLAPELLCAQLLDTCLCKGS------LDNMTCILVCFP 327
Query: 506 -KPRNTAE 512
PR + E
Sbjct: 328 GAPRPSEE 335
Score = 58.5 bits (140), Expect = 1e-08
Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 6/87 (6%)
Query: 25 LPYGFSAMQGWRVSMEDAHNC---IPELDSETAMFSVYDGHGGEEVALYCAKYLPDIIKD 81
L +G SA QGWR MEDAH +P L A+F+V DGHGG A + A++LP +
Sbjct: 65 LRFGASAAQGWRARMEDAHCTWLSLPGLPPGWALFAVLDGHGGARAARFGARHLPGHVLQ 124
Query: 82 QKAYKEGK---LQKALEDAFLAIDAKL 105
+ + + +++AL AFL+ D +L
Sbjct: 125 ELGPEPSEPEGVREALRRAFLSADERL 151
>gi|63003905 protein phosphatase 1 (formerly 2C)-like [Homo sapiens]
Length = 360
Score = 100 bits (249), Expect = 3e-21
Identities = 66/196 (33%), Positives = 105/196 (53%), Gaps = 32/196 (16%)
Query: 326 DSGTTAVVALIRGKQLIVANAGDSRCVVSEA-GKALDMSYDHKPEDEVELARIKNAGGKV 384
++GTT ++AL+ K L VAN GDSR V+ + G A+ +S+DHKP E RIK AGG +
Sbjct: 190 EAGTTCLIALLSDKDLTVANVGDSRGVLCDKDGNAIPLSHDHKPYQLKERKRIKRAGGFI 249
Query: 385 TMDG--RVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDH---EFMVIA 439
+ +G RV G L +SR++GD+ P + + +PD +LT D EFM++A
Sbjct: 250 SFNGSWRVQGILAMSRSLGDY---------PLKNLNVVIPDPDILTFDLDKLQPEFMILA 300
Query: 440 CDGIWNVMSSQEVVDFIQSKISQRDENGELRLLSSIVEELLDQCLAPDTSGDGTGC-DNM 498
DG+W+ S++E V FI+ ++ + + +L S GC DN+
Sbjct: 301 SDGLWDAFSNEEAVRFIKERLDEPHFGAKSIVLQSFYR----------------GCPDNI 344
Query: 499 TCIIICFKPRNTAELQ 514
T +++ F+ + E Q
Sbjct: 345 TVMVVKFRNSSKTEEQ 360
Score = 46.2 bits (108), Expect = 8e-05
Identities = 29/84 (34%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 31 AMQGWRVSMEDAHNCIPELDSET--AMFSVYDGHGGEEVALYCAKYLPDIIK----DQKA 84
++QG R MED + +L ++T ++F ++DGHGGE A Y LP+ +K D +
Sbjct: 97 SIQGRRDHMEDRFEVLTDLANKTHPSIFGIFDGHGGETAAEYVKSRLPEALKQHLQDYEK 156
Query: 85 YKEGKL---QKALEDAFLAIDAKL 105
KE + Q LE L+ID ++
Sbjct: 157 DKENSVLSYQTILEQQILSIDREM 180
>gi|7661862 protein phosphatase 1F [Homo sapiens]
Length = 454
Score = 91.7 bits (226), Expect = 2e-18
Identities = 60/152 (39%), Positives = 89/152 (58%), Gaps = 12/152 (7%)
Query: 327 SGTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVT- 385
SGTT V ALI G L VA GDS+ ++ + G+ + + H+PE + E ARI+ GG V+
Sbjct: 253 SGTTGVCALIAGATLHVAWLGDSQVILVQQGQVVKLMEPHRPERQDEKARIEALGGFVSH 312
Query: 386 MD-GRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIW 444
MD RVNG L +SRAIGD F K +S D LT +++++ACDG +
Sbjct: 313 MDCWRVNGTLAVSRAIGDVFQK---------PYVSGEADAASRALTGSEDYLLLACDGFF 363
Query: 445 NVMSSQEVVDFIQSKISQRDENGELRLLSSIV 476
+V+ QEVV +QS ++++ +G LR+ +V
Sbjct: 364 DVVPHQEVVGLVQSHLTRQQGSG-LRVAEELV 394
Score = 34.7 bits (78), Expect = 0.23
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 8/53 (15%)
Query: 31 AMQGWRVSMEDAHNCIPELDS--------ETAMFSVYDGHGGEEVALYCAKYL 75
A++ R MED H +P + A F+V+DGHGG + A Y A ++
Sbjct: 161 AIRNTRRKMEDRHVSLPSFNQLFGLSDPVNRAYFAVFDGHGGVDAARYAAVHV 213
>gi|30089948 protein phosphatase 1E [Homo sapiens]
Length = 755
Score = 90.5 bits (223), Expect = 4e-18
Identities = 69/216 (31%), Positives = 108/216 (50%), Gaps = 27/216 (12%)
Query: 328 GTTAVVALIRGKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVTMD 387
GTT VV IRG L VA GDS+ ++ G+A+++ HKP+ E E RI+ GG V
Sbjct: 329 GTTGVVTFIRGNMLHVAWVGDSQVMLVRKGQAVELMKPHKPDREDEKQRIEALGGCVVWF 388
Query: 388 G--RVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHEFMVIACDGIWN 445
G RVNG L++SRAIGD +K I D L +++++ACDG ++
Sbjct: 389 GAWRVNGSLSVSRAIGDAEHK---------PYICGDADSASTVLDGTEDYLILACDGFYD 439
Query: 446 VMSSQEVVDFIQSKISQRDENGELRLLSSIVEELLDQCLAPDTSGDGTGCDNMTCIIICF 505
++ E V + + ++ NG+ SS+V L ++ D DN+T I++
Sbjct: 440 TVNPDEAVKVVSDHL--KENNGD----SSMVAHKL-----VASARDAGSSDNITVIVVFL 488
Query: 506 KPRNTA-ELQPESGKRKLEEVLSTEGAEENGNSDKK 540
+ N A + ES + S +G +E+G DK+
Sbjct: 489 RDMNKAVNVSEESDWTE----NSFQGGQEDGGDDKE 520
Score = 45.4 bits (106), Expect = 1e-04
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 9/102 (8%)
Query: 21 PRLPLPYGFSAMQGWRVSMEDAHNCIPELD--------SETAMFSVYDGHGGEEVALYCA 72
P+L A++ R MED H CIP+ + E A F+V+DGHGG + A+Y +
Sbjct: 226 PQLYYETSIHAIKNMRRKMEDKHVCIPDFNMLFNLEDQEEQAYFAVFDGHGGVDAAIYAS 285
Query: 73 KYLPDIIKDQKAYKEGKLQKALEDAFLAIDAKLTTEEVIKEL 114
+L + Q+ + + AL AF D + + + L
Sbjct: 286 IHLHVNLVRQEMFPHDPAE-ALCRAFRVTDERFVQKAARESL 326
Score = 33.9 bits (76), Expect = 0.39
Identities = 33/108 (30%), Positives = 43/108 (39%), Gaps = 16/108 (14%)
Query: 206 PTAKAYTGFSS---NSERGTEAGQVGEPGIPTGEAGPSCSSASDKLPRVAKSKFFEDSED 262
P K Y F RG G EP P E P S + P + E
Sbjct: 6 PEEKTYRRFLELFLGEFRGPCGGGEPEPE-PEPEPEPEPESEPEPEPELV--------EA 56
Query: 263 ESDEAEEEEEDSEECSEEEDGYSSEEAENEEDEDDTEEAEEDDEEEEE 310
E+ EA EE E + ++EE + E+D + EEA + EEEEE
Sbjct: 57 EAAEASVEEPGEEAATVA----ATEEGDQEQDPEPEEEAAVEGEEEEE 100
Score = 32.7 bits (73), Expect = 0.88
Identities = 28/77 (36%), Positives = 33/77 (42%), Gaps = 5/77 (6%)
Query: 258 EDSEDESDEAEEEEEDSEECSEEEDGYSSEEAENEEDED--DTEEA-EEDDEEEEEEMMV 314
E + E E E E E E E +S E EE TEE +E D E EEE V
Sbjct: 34 EPEPEPEPEPESEPEPEPELVEAEAAEASVEEPGEEAATVAATEEGDQEQDPEPEEEAAV 93
Query: 315 PGMEGKEEPGSDSGTTA 331
G E EE G+ + A
Sbjct: 94 EGEE--EEEGAATAAAA 108
>gi|13540531 integrin-linked kinase-associated protein phosphatase
2C [Homo sapiens]
Length = 392
Score = 89.0 bits (219), Expect = 1e-17
Identities = 55/144 (38%), Positives = 81/144 (56%), Gaps = 15/144 (10%)
Query: 321 EEPGSDSGTTAVVALIRGKQLIVANAGDSRCVV------SEAGKALDMSYDHKPEDEVEL 374
++P G+TA L L +AN GDSR ++ S+ AL +S +H P E
Sbjct: 209 QKPAWKDGSTATCVLAVDNILYIANLGDSRAILCRYNEESQKHAALSLSKEHNPTQYEER 268
Query: 375 ARIKNAGGKVTMDGRVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTDDHE 434
RI+ AGG V DGRV G L +SR+IGD YKR ++++PDI+ LT +
Sbjct: 269 MRIQKAGGNVR-DGRVLGVLEVSRSIGDGQYKRCG--------VTSVPDIRRCQLTPNDR 319
Query: 435 FMVIACDGIWNVMSSQEVVDFIQS 458
F+++ACDG++ V + +E V+FI S
Sbjct: 320 FILLACDGLFKVFTPEEAVNFILS 343
Score = 32.3 bits (72), Expect = 1.1
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 20/96 (20%)
Query: 33 QGWRVSMEDAHNCIPELDSE----------TAMFSVYDGHGGEEVALYCAKYLPDII--- 79
+G R M+DAH + ++ E + F+V+DGHGG + + A+ L +
Sbjct: 115 KGEREEMQDAHVILNDITEECRPPSSLITRVSYFAVFDGHGGIRASKFAAQNLHQNLIRK 174
Query: 80 --KDQKAYKEGKLQKALEDAFLAIDAKLTTEEVIKE 113
K E +++ L D F K T EE +K+
Sbjct: 175 FPKGDVISVEKTVKRCLLDTF-----KHTDEEFLKQ 205
>gi|167466276 protein phosphatase 1K (PP2C domain containing) [Homo
sapiens]
Length = 372
Score = 83.6 bits (205), Expect = 4e-16
Identities = 54/136 (39%), Positives = 79/136 (58%), Gaps = 14/136 (10%)
Query: 327 SGTTAVVALIR-GKQLIVANAGDSRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGKVT 385
SGTTA VAL+R G +L+VA+ GDSR ++ GK + ++ DH PE + E RIK GG V
Sbjct: 186 SGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLTIDHTPERKDEKERIKKCGGFVA 245
Query: 386 MDG----RVNGGLNLSRAIGDHFYKRNKNLPPEEQMISALPDIKVLTLTD-DHEFMVIAC 440
+ VNG L ++R+IGD L + + A P+ K + L D F+V+
Sbjct: 246 WNSLGQPHVNGRLAMTRSIGD--------LDLKTSGVIAEPETKRIKLHHADDSFLVLTT 297
Query: 441 DGIWNVMSSQEVVDFI 456
DGI +++SQE+ DF+
Sbjct: 298 DGINFMVNSQEICDFV 313
Score = 42.0 bits (97), Expect = 0.001
Identities = 31/87 (35%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 17 GVGAPRLPLP-YGFSAMQGWRVSMEDAHNCIPELDSETAMFSVYDGHGGEEVALYCAKYL 75
G P++ L G ++ G R ED + +L E F+VYDGHGG A +C ++
Sbjct: 84 GKPIPKISLENVGCASQIGKRKENEDRFD-FAQLTDEVLYFAVYDGHGGPAAADFCHTHM 142
Query: 76 PDIIKDQKAYKEGKLQKALEDAFLAID 102
I D KE L+ L AFL ID
Sbjct: 143 EKCIMDLLP-KEKNLETLLTLAFLEID 168
>gi|4505997 protein phosphatase 1D [Homo sapiens]
Length = 605
Score = 69.7 bits (169), Expect = 6e-12
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 38/215 (17%)
Query: 325 SDSGTTAVVALIRGKQLIVANAGDSRCVVS-------EAGKALDMSYDHKPEDEVELARI 377
S SGTTA V +IRG ++ VA+ GDS V+ + +A++++ DHKPE E RI
Sbjct: 169 STSGTTASVVIIRGMKMYVAHVGDSGVVLGIQDDPKDDFVRAVEVTQDHKPELPKERERI 228
Query: 378 KNAGGKVTMDGRVNGG------------------------LNLSRAIGDHFYKRNKNLPP 413
+ GG V VN L ++RA+GD + + +
Sbjct: 229 EGLGGSVMNKSGVNRVVWKRPRLTHNGPVRRSTVIDQIPFLAVARALGDLW---SYDFFS 285
Query: 414 EEQMISALPDIKVLTLTDD-HEFMVIACDGIWNVMSSQEVVDFIQSKISQRDENGELRLL 472
E ++S PD V TL H+++++ DG+WN++ Q+ + Q + ++ GE
Sbjct: 286 GEFVVSPEPDTSVHTLDPQKHKYIILGSDGLWNMIPPQDAISMCQDQEEKKYLMGEHG-- 343
Query: 473 SSIVEELLDQCLAPDTSGDGTGCDNMTCIIICFKP 507
S + L+++ L DN + I+IC P
Sbjct: 344 QSCAKMLVNRALG-RWRQRMLRADNTSAIVICISP 377
Score = 39.7 bits (91), Expect = 0.007
Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 15/91 (16%)
Query: 25 LPYGFSAMQGWRVSMEDAHNCIPELD------------SETAMFSVYDGHGGEEVALYCA 72
LP G + +G V+ +A + +P+ S A F+V DGHGG E A +
Sbjct: 58 LPGGEVSGKGPAVAAREARDPLPDAGASPAPSRCCRRRSSVAFFAVCDGHGGREAAQFAR 117
Query: 73 KYLPDIIKDQKAY---KEGKLQKALEDAFLA 100
++L IK QK + + K+ A+ FLA
Sbjct: 118 EHLWGFIKKQKGFTSSEPAKVCAAIRKGFLA 148
>gi|4503257 death-domain associated protein isoform a [Homo sapiens]
Length = 740
Score = 65.9 bits (159), Expect = 9e-11
Identities = 49/130 (37%), Positives = 65/130 (50%), Gaps = 16/130 (12%)
Query: 213 GFSSNSERGTEAGQVGEPGIPTGEAGPSCSSASDKLPRVAKSKFFEDSEDESDEAEEEEE 272
G SS+S EA G P+G A C SAS +++DE DE +EEE
Sbjct: 400 GTSSHSADTPEASLDSGEG-PSGMASQGCPSASRA-----------ETDDEDDEESDEEE 447
Query: 273 DSEECSEEEDGYSSEEAENEEDEDDTEEAEEDDE-EEEEEMMVPGMEGKEEPGSDSGTTA 331
+ EE EEE+ SEE EED + +E +EDDE E+EEE G +G + P S +
Sbjct: 448 EEEEEEEEEEATDSEE---EEDLEQMQEGQEDDEEEDEEEEAAAGKDGDKSPMSSLQISN 504
Query: 332 VVALIRGKQL 341
L GKQ+
Sbjct: 505 EKNLEPGKQI 514
Score = 35.4 bits (80), Expect = 0.14
Identities = 19/81 (23%), Positives = 39/81 (48%)
Query: 242 SSASDKLPRVAKSKFFEDSEDESDEAEEEEEDSEECSEEEDGYSSEEAENEEDEDDTEEA 301
S ++ R A+ + ++ EA + + + S+ AE ++++D+ +
Sbjct: 386 SEEGERKKRRARLQGTSSHSADTPEASLDSGEGPSGMASQGCPSASRAETDDEDDEESDE 445
Query: 302 EEDDEEEEEEMMVPGMEGKEE 322
EE++EEEEEE E +E+
Sbjct: 446 EEEEEEEEEEEEATDSEEEED 466
Score = 30.4 bits (67), Expect = 4.3
Identities = 46/244 (18%), Positives = 88/244 (36%), Gaps = 7/244 (2%)
Query: 89 KLQKALEDAFLAIDAKLTTEEVIKELAQIAGRPTEDEDEKEKVADEDDVDNEEAALLHEE 148
+LQ +DAF + +L + + T+D A D V
Sbjct: 308 QLQLMAQDAFRDVGIRLQERRHLDLIYNFGCHLTDDYRPGVDPALSDPVLARRLRENRSL 367
Query: 149 ATMTIEELLTRYGQNCHKGPPHSKSGGGTGEEPGSQGLNGEAGPEDSTRETPSQENGPTA 208
A ++E++++Y K S+ G QG + + D+ + GP+
Sbjct: 368 AMSRLDEVISKYAMLQDK----SEEGERKKRRARLQGTSSHSA--DTPEASLDSGEGPSG 421
Query: 209 KAYTGFSSNSERGTEAGQVGEPGIPTGEAGPSCSSASDKLPRVAKSKFFEDSEDESDEAE 268
A G S S T+ E E + + ++ +++ +E +
Sbjct: 422 MASQGCPSASRAETDDEDDEESDEEEEEEEEEEEEEATDSEEEEDLEQMQEGQEDDEEED 481
Query: 269 EEEEDSEECSEEEDGYSSEEAENEED-EDDTEEAEEDDEEEEEEMMVPGMEGKEEPGSDS 327
EEEE + ++ SS + NE++ E + + E++ + +V EEP + S
Sbjct: 482 EEEEAAAGKDGDKSPMSSLQISNEKNLEPGKQISRSSGEQQNKGRIVSPSLLSEEPLAPS 541
Query: 328 GTTA 331
A
Sbjct: 542 SIDA 545
>gi|215422388 death-domain associated protein isoform a [Homo
sapiens]
Length = 740
Score = 65.9 bits (159), Expect = 9e-11
Identities = 49/130 (37%), Positives = 65/130 (50%), Gaps = 16/130 (12%)
Query: 213 GFSSNSERGTEAGQVGEPGIPTGEAGPSCSSASDKLPRVAKSKFFEDSEDESDEAEEEEE 272
G SS+S EA G P+G A C SAS +++DE DE +EEE
Sbjct: 400 GTSSHSADTPEASLDSGEG-PSGMASQGCPSASRA-----------ETDDEDDEESDEEE 447
Query: 273 DSEECSEEEDGYSSEEAENEEDEDDTEEAEEDDE-EEEEEMMVPGMEGKEEPGSDSGTTA 331
+ EE EEE+ SEE EED + +E +EDDE E+EEE G +G + P S +
Sbjct: 448 EEEEEEEEEEATDSEE---EEDLEQMQEGQEDDEEEDEEEEAAAGKDGDKSPMSSLQISN 504
Query: 332 VVALIRGKQL 341
L GKQ+
Sbjct: 505 EKNLEPGKQI 514
Score = 35.4 bits (80), Expect = 0.14
Identities = 19/81 (23%), Positives = 39/81 (48%)
Query: 242 SSASDKLPRVAKSKFFEDSEDESDEAEEEEEDSEECSEEEDGYSSEEAENEEDEDDTEEA 301
S ++ R A+ + ++ EA + + + S+ AE ++++D+ +
Sbjct: 386 SEEGERKKRRARLQGTSSHSADTPEASLDSGEGPSGMASQGCPSASRAETDDEDDEESDE 445
Query: 302 EEDDEEEEEEMMVPGMEGKEE 322
EE++EEEEEE E +E+
Sbjct: 446 EEEEEEEEEEEEATDSEEEED 466
Score = 30.4 bits (67), Expect = 4.3
Identities = 46/244 (18%), Positives = 88/244 (36%), Gaps = 7/244 (2%)
Query: 89 KLQKALEDAFLAIDAKLTTEEVIKELAQIAGRPTEDEDEKEKVADEDDVDNEEAALLHEE 148
+LQ +DAF + +L + + T+D A D V
Sbjct: 308 QLQLMAQDAFRDVGIRLQERRHLDLIYNFGCHLTDDYRPGVDPALSDPVLARRLRENRSL 367
Query: 149 ATMTIEELLTRYGQNCHKGPPHSKSGGGTGEEPGSQGLNGEAGPEDSTRETPSQENGPTA 208
A ++E++++Y K S+ G QG + + D+ + GP+
Sbjct: 368 AMSRLDEVISKYAMLQDK----SEEGERKKRRARLQGTSSHSA--DTPEASLDSGEGPSG 421
Query: 209 KAYTGFSSNSERGTEAGQVGEPGIPTGEAGPSCSSASDKLPRVAKSKFFEDSEDESDEAE 268
A G S S T+ E E + + ++ +++ +E +
Sbjct: 422 MASQGCPSASRAETDDEDDEESDEEEEEEEEEEEEEATDSEEEEDLEQMQEGQEDDEEED 481
Query: 269 EEEEDSEECSEEEDGYSSEEAENEED-EDDTEEAEEDDEEEEEEMMVPGMEGKEEPGSDS 327
EEEE + ++ SS + NE++ E + + E++ + +V EEP + S
Sbjct: 482 EEEEAAAGKDGDKSPMSSLQISNEKNLEPGKQISRSSGEQQNKGRIVSPSLLSEEPLAPS 541
Query: 328 GTTA 331
A
Sbjct: 542 SIDA 545
>gi|215422366 death-domain associated protein isoform b [Homo
sapiens]
Length = 752
Score = 65.9 bits (159), Expect = 9e-11
Identities = 49/130 (37%), Positives = 65/130 (50%), Gaps = 16/130 (12%)
Query: 213 GFSSNSERGTEAGQVGEPGIPTGEAGPSCSSASDKLPRVAKSKFFEDSEDESDEAEEEEE 272
G SS+S EA G P+G A C SAS +++DE DE +EEE
Sbjct: 412 GTSSHSADTPEASLDSGEG-PSGMASQGCPSASRA-----------ETDDEDDEESDEEE 459
Query: 273 DSEECSEEEDGYSSEEAENEEDEDDTEEAEEDDE-EEEEEMMVPGMEGKEEPGSDSGTTA 331
+ EE EEE+ SEE EED + +E +EDDE E+EEE G +G + P S +
Sbjct: 460 EEEEEEEEEEATDSEE---EEDLEQMQEGQEDDEEEDEEEEAAAGKDGDKSPMSSLQISN 516
Query: 332 VVALIRGKQL 341
L GKQ+
Sbjct: 517 EKNLEPGKQI 526
Score = 35.4 bits (80), Expect = 0.14
Identities = 19/81 (23%), Positives = 39/81 (48%)
Query: 242 SSASDKLPRVAKSKFFEDSEDESDEAEEEEEDSEECSEEEDGYSSEEAENEEDEDDTEEA 301
S ++ R A+ + ++ EA + + + S+ AE ++++D+ +
Sbjct: 398 SEEGERKKRRARLQGTSSHSADTPEASLDSGEGPSGMASQGCPSASRAETDDEDDEESDE 457
Query: 302 EEDDEEEEEEMMVPGMEGKEE 322
EE++EEEEEE E +E+
Sbjct: 458 EEEEEEEEEEEEATDSEEEED 478
Score = 30.4 bits (67), Expect = 4.3
Identities = 46/244 (18%), Positives = 88/244 (36%), Gaps = 7/244 (2%)
Query: 89 KLQKALEDAFLAIDAKLTTEEVIKELAQIAGRPTEDEDEKEKVADEDDVDNEEAALLHEE 148
+LQ +DAF + +L + + T+D A D V
Sbjct: 320 QLQLMAQDAFRDVGIRLQERRHLDLIYNFGCHLTDDYRPGVDPALSDPVLARRLRENRSL 379
Query: 149 ATMTIEELLTRYGQNCHKGPPHSKSGGGTGEEPGSQGLNGEAGPEDSTRETPSQENGPTA 208
A ++E++++Y K S+ G QG + + D+ + GP+
Sbjct: 380 AMSRLDEVISKYAMLQDK----SEEGERKKRRARLQGTSSHSA--DTPEASLDSGEGPSG 433
Query: 209 KAYTGFSSNSERGTEAGQVGEPGIPTGEAGPSCSSASDKLPRVAKSKFFEDSEDESDEAE 268
A G S S T+ E E + + ++ +++ +E +
Sbjct: 434 MASQGCPSASRAETDDEDDEESDEEEEEEEEEEEEEATDSEEEEDLEQMQEGQEDDEEED 493
Query: 269 EEEEDSEECSEEEDGYSSEEAENEED-EDDTEEAEEDDEEEEEEMMVPGMEGKEEPGSDS 327
EEEE + ++ SS + NE++ E + + E++ + +V EEP + S
Sbjct: 494 EEEEAAAGKDGDKSPMSSLQISNEKNLEPGKQISRSSGEQQNKGRIVSPSLLSEEPLAPS 553
Query: 328 GTTA 331
A
Sbjct: 554 SIDA 557
>gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Homo
sapiens]
Length = 1152
Score = 64.7 bits (156), Expect = 2e-10
Identities = 62/219 (28%), Positives = 83/219 (37%), Gaps = 22/219 (10%)
Query: 119 GRPTEDEDEKEKVADEDDVDNEEAALLHEEATMTIEELLTRYGQNCHKGPPHSKSGGGTG 178
G E E+E E+ E + + E E EE G+ +G + G G G
Sbjct: 862 GEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGKG 921
Query: 179 EEPGSQGLN------GEAGPEDSTRETPSQENGPTAKAYTGFSSNSERGTEAGQVGEPGI 232
EE G +G GE ED E +E + G E G G+ GE
Sbjct: 922 EEEGEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWEGEEEEGEGEGEEEGEGEGEEGEG-- 979
Query: 233 PTGEAGPSCSSASDKLPRVAKSKFFEDSEDESDEAEEEEEDSEECSEEEDGYSSEEAENE 292
GE ++ E E+ +E E EEE E EEE+G E E E
Sbjct: 980 -EGEEEEGEGEGEEE----------EGEEEGEEEGEGEEEGEGEGEEEEEGEVEGEVEGE 1028
Query: 293 EDEDDTEEAEEDDEEEEEEMMVPGME---GKEEPGSDSG 328
E E + EE E ++E EE E G E +EE + G
Sbjct: 1029 EGEGEGEEEEGEEEGEEREKEGEGEENRRNREEEEEEEG 1067
Score = 63.9 bits (154), Expect = 4e-10
Identities = 63/229 (27%), Positives = 91/229 (39%), Gaps = 18/229 (7%)
Query: 113 ELAQIAGRPTEDEDEKEKVADEDDVDNEEAALLHEEATMTIEELLTRYGQNCHKGPPHSK 172
E+ + G E+E+E E +E + + EE EE EE G+ +G +
Sbjct: 818 EVEEGKGEREEEEEEGEGEEEEGEGEEEEGEGEEEEGEGKGEE----EGEE-GEGEEEGE 872
Query: 173 SGGGTGEEPGSQGLNGEAGPEDSTRETPSQENGPTAKAYTGFSSNSERGTEAGQVGEPGI 232
G G GEE +G E G + E E + +G E G+ GE G
Sbjct: 873 EGEGEGEEEEGEGEGEEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGKGEEEGEEGE-GE 931
Query: 233 PTGEAGPSCSSASDKLPRVAKSKFFEDSEDESDEAEEEEEDSEECSEEEDGYSSEEAENE 292
E G + + E+E E E EEE+ E EEE EE E E
Sbjct: 932 GEEEEGEGEGEDGEG-----------EGEEEEGEWEGEEEEGEGEGEEEGEGEGEEGEGE 980
Query: 293 EDEDDTE-EAEEDDEEEEEEMMVPGMEGKEEPGSDSGTTAVVALIRGKQ 340
+E++ E E EE++ EEE E G E E G + V + G++
Sbjct: 981 GEEEEGEGEGEEEEGEEEGEEEGEGEEEGEGEGEEEEEGEVEGEVEGEE 1029
Score = 59.3 bits (142), Expect = 9e-09
Identities = 67/245 (27%), Positives = 97/245 (39%), Gaps = 34/245 (13%)
Query: 87 EGKLQKALEDAFLAIDAKLTTEEVIKELAQIAGRPTEDEDEKEKVADEDDVDNEEAALLH 146
EG+ + A ++ + D + E+ KE Q G E E E+ +E+ + EE
Sbjct: 691 EGEKELAEKEEWKKRDGE---EQEQKEREQ--GHQKERNQEMEEGGEEEHGEGEE----- 740
Query: 147 EEATMTIEELLTRYGQNCHKGPPHSKSGGGTGEEPGSQGLNGEAGPEDSTRETPSQENGP 206
EE EE + G+ +G G EE G + AG E+ E Q G
Sbjct: 741 EEGDREEEE--EKEGEGKEEGEGEEVEGEREKEE-GERKKEERAGKEEKGEEEGDQGEGE 797
Query: 207 TAKAYTGFSSNSERGTEAGQVGEPGIPTGEAGPSCSSASDKLPRVAKSKFFEDSEDESDE 266
+ E E G+V + G+ + + E+ E E +E
Sbjct: 798 EEET----EGRGEEKEEGGEVEGGEVEEGKG--------------EREEEEEEGEGEEEE 839
Query: 267 AEEEEEDSEECSEEEDGYSSEEAENEEDEDDTEEAEEDDEEEE---EEMMVPGMEGKEEP 323
E EEE+ E EE +G EE E E E++ EE E + EEEE E EG+EE
Sbjct: 840 GEGEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGEEEE 899
Query: 324 GSDSG 328
G G
Sbjct: 900 GEGEG 904
Score = 52.4 bits (124), Expect = 1e-06
Identities = 61/207 (29%), Positives = 74/207 (35%), Gaps = 32/207 (15%)
Query: 123 EDEDEKEKVADEDDVDNE-EAALLHEEATMTIEELLTRYGQNCHKGPPHSKSGGGTGEEP 181
E+E+EKE E+ E E EE EE R G+ KG G G EE
Sbjct: 746 EEEEEKEGEGKEEGEGEEVEGEREKEEGERKKEE---RAGKE-EKGEEEGDQGEGEEEET 801
Query: 182 GSQGLNGEAGPEDSTRETPSQENGPTAKAYTGFSSNSERGTEAGQVGEPGIPTGEAGPSC 241
+G E G E E G + E G + GE GE
Sbjct: 802 EGRGEEKEEGGE--------VEGGEVEEGKGEREEEEEEGEGEEEEGEGEEEEGEGEEEE 853
Query: 242 SSASDKLPRVAKSKFFEDSEDESDEAEEEEEDSEECSEEEDGYSSEEAENEEDEDDTEEA 301
+ E E E EEE E+ E EEE+G E E E E + EE
Sbjct: 854 GEGKG------------EEEGEEGEGEEEGEEGEGEGEEEEG-EGEGEEEGEGEGEEEEG 900
Query: 302 EEDDEEEEEEMMVPGMEGKEEPGSDSG 328
E + EEE E EG+EE G G
Sbjct: 901 EGEGEEEGEG------EGEEEEGEGKG 921
Score = 52.0 bits (123), Expect = 1e-06
Identities = 52/193 (26%), Positives = 73/193 (37%), Gaps = 39/193 (20%)
Query: 119 GRPTEDEDEKEKVADEDDVDNEEAALLHEEATMTIEELLTRYGQNCHKGPPHSKSGGGTG 178
G E+E E E E + + EE EE EE G+ +G + G G G
Sbjct: 930 GEGEEEEGEGEGEDGEGEGEEEEGEWEGEE-----EE---GEGEGEEEGEGEGEEGEGEG 981
Query: 179 EEPGSQGLNGEAGPEDSTRETPSQENGPTAKAYTGFSSNSERGTEAGQVGEPGIPTGEAG 238
EE GE E+ E +E G + G E G G+V GE G
Sbjct: 982 EEE-----EGEGEGEEEEGEEEGEEEGEGEEEGEGEGEEEEEGEVEGEV------EGEEG 1030
Query: 239 PSCSSASDKLPRVAKSKFFEDSEDESDEAEEEEEDSEECSEEEDGYSSEEAENEEDEDDT 298
+ E E +E EEE E+ E+ E E+ + E E EE+
Sbjct: 1031 --------------------EGEGEEEEGEEEGEEREKEGEGEENRRNREEEEEEEGKYQ 1070
Query: 299 EEAEEDDEEEEEE 311
E EE++E ++ E
Sbjct: 1071 ETGEEENERQDGE 1083
Score = 49.3 bits (116), Expect = 9e-06
Identities = 67/272 (24%), Positives = 105/272 (38%), Gaps = 20/272 (7%)
Query: 77 DIIKDQKAYKEGKLQKALEDAFLAIDAKLTTEEVIK-ELAQIAGRPTEDEDEKEKVADED 135
D ++ KEGK K + + TT E E +I ED K +E
Sbjct: 545 DEYEEMSEMKEGKACKQHVSQGIFMTQPATTIEAFSDEEVEIPEEKEGAEDSKGNGIEEQ 604
Query: 136 DVD-NEEAALLH---EEATMTIEELLT---RYGQNCHKGPPHSKSGG-GTGEEPGSQGLN 187
+V+ NEE +H +E T + + LT + K ++ G G G+ +G +
Sbjct: 605 EVEANEENVKVHGGRKEKTEILSDDLTDKAEVSEGKAKSVGEAEDGPEGRGDGTCEEGSS 664
Query: 188 GEAGPEDSTRETPSQENG--PTAKAYTGFSSNSERGTEAGQVGEPGIPTGEAGPSCSSAS 245
G +D RE ++ G + G +E+ + GE +
Sbjct: 665 GAEHWQDEEREKGEKDKGRGEMERPGEGEKELAEKEEWKKRDGEEQEQKEREQGHQKERN 724
Query: 246 DKLPRVAKSKFFEDSEDESDEAEEEEEDSE-----ECSEEEDGYSSEEAENEEDE----D 296
++ + + E E+E D EEEE++ E E E E EE E +++E +
Sbjct: 725 QEMEEGGEEEHGEGEEEEGDREEEEEKEGEGKEEGEGEEVEGEREKEEGERKKEERAGKE 784
Query: 297 DTEEAEEDDEEEEEEMMVPGMEGKEEPGSDSG 328
+ E E D E EEE E KEE G G
Sbjct: 785 EKGEEEGDQGEGEEEETEGRGEEKEEGGEVEG 816
>gi|17975763 myelin transcription factor 1 [Homo sapiens]
Length = 1121
Score = 64.3 bits (155), Expect = 3e-10
Identities = 35/80 (43%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
Query: 252 AKSKFFEDSEDESDEAEEEEEDSEECSEEEDGYSSEEAENEEDEDDTEEAEEDDEEEEEE 311
+K K E+E +E EEEEE+ EE EEE+ EE E EE+E++ EE EE++EEEEEE
Sbjct: 249 SKQKGILSHEEEDEEEEEEEEEEEEDEEEEE---EEEEEEEEEEEEEEEEEEEEEEEEEE 305
Query: 312 MMVPGMEGKEEPGSDSGTTA 331
P + +E+ S A
Sbjct: 306 EAAPDVIFQEDTSHTSAQKA 325
Score = 58.2 bits (139), Expect = 2e-08
Identities = 29/68 (42%), Positives = 40/68 (58%)
Query: 244 ASDKLPRVAKSKFFEDSEDESDEAEEEEEDSEECSEEEDGYSSEEAENEEDEDDTEEAEE 303
+ D P+ + E+S + EEED EE EEE+ EE E EE+E++ EE EE
Sbjct: 232 SQDLCPQSLEDAASEESSKQKGILSHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEE 291
Query: 304 DDEEEEEE 311
++EEEEEE
Sbjct: 292 EEEEEEEE 299
Score = 55.1 bits (131), Expect = 2e-07
Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 258 EDSEDESDEAEEEEEDSEECSEEEDGYSSEEAENEEDEDDTEEAEED-----DEEEEEEM 312
E+ E+E +E +EEEE+ EE EEE+ EE E EE+E++ EEA D D
Sbjct: 264 EEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAAPDVIFQEDTSHTSAQ 323
Query: 313 MVPGMEGKEEPGSDSGTTAVV 333
P + G E P + +V
Sbjct: 324 KAPELRGPESPSPKPEYSVIV 344
Score = 42.7 bits (99), Expect = 8e-04
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 11/76 (14%)
Query: 258 EDSEDESDEAEEEEED----------SEECSEEEDGYSSEEAENEEDEDDTEEAE-EDDE 306
ED+E+ + E +D SEE S+++ S EE + EE+E++ EE E E++E
Sbjct: 219 EDAEEVVEVTTERSQDLCPQSLEDAASEESSKQKGILSHEEEDEEEEEEEEEEEEDEEEE 278
Query: 307 EEEEEMMVPGMEGKEE 322
EEEEE E +EE
Sbjct: 279 EEEEEEEEEEEEEEEE 294
Score = 36.6 bits (83), Expect = 0.061
Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 3/101 (2%)
Query: 223 EAGQVGEPGIPTGEAGPSCSSASDKLPRVAKSKFFEDSEDESDEAEEEEEDSEE-CSEEE 281
+ GQ +PG G +A + F ED + E E S++ C +
Sbjct: 183 DLGQAAKPG--PGIVHLLQEAAEGAASEEGEKGLFIQPEDAEEVVEVTTERSQDLCPQSL 240
Query: 282 DGYSSEEAENEEDEDDTEEAEEDDEEEEEEMMVPGMEGKEE 322
+ +SEE+ ++ EE +E++EEEEEE E +EE
Sbjct: 241 EDAASEESSKQKGILSHEEEDEEEEEEEEEEEEDEEEEEEE 281
Score = 34.3 bits (77), Expect = 0.30
Identities = 29/110 (26%), Positives = 39/110 (35%), Gaps = 48/110 (43%)
Query: 258 EDSEDESDEAEEEEEDSEECSEEEDGYSSEEAENEE------------------------ 293
E+ EDE +E EEEEE+ EE EEE+ EE E EE
Sbjct: 270 EEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAAPDVIFQEDTSHTSAQKAPELR 329
Query: 294 ---------------------DEDDTEEAEED---DEEEEEEMMVPGMEG 319
D+D+ + + DE E ++MM G G
Sbjct: 330 GPESPSPKPEYSVIVEVRSDDDKDEDTHSRKSTVTDESEMQDMMTRGNLG 379
Score = 30.8 bits (68), Expect = 3.3
Identities = 18/73 (24%), Positives = 37/73 (50%)
Query: 71 CAKYLPDIIKDQKAYKEGKLQKALEDAFLAIDAKLTTEEVIKELAQIAGRPTEDEDEKEK 130
C + L D ++ + ++G L ED + + E+ +E + E+E+E+E+
Sbjct: 236 CPQSLEDAASEESSKQKGILSHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEE 295
Query: 131 VADEDDVDNEEAA 143
+E++ + EEAA
Sbjct: 296 EEEEEEEEEEEAA 308
Score = 29.3 bits (64), Expect = 9.7
Identities = 27/118 (22%), Positives = 51/118 (43%), Gaps = 9/118 (7%)
Query: 193 EDSTRETPSQENGPTAKAYTGFSS-NSERGTEAGQVGEPGIPTGEAGPSCSSASDKLPRV 251
E+ T + ++ A+ SS +S G ++ + T + PS S S + +
Sbjct: 665 ENGTLDLSMHKHRKRENAFPSSSSCSSSPGVKSPDASQRHSST--SAPSSSMTSPQSSQA 722
Query: 252 AKSKFFEDSEDESDEAEEEEEDSEECSEEEDGYSSEEAENEEDEDDTEEAEEDDEEEE 309
++ ++ D + + EE+ EE ++S EA DD E +EE+ EE +
Sbjct: 723 SRQDEWDRPLDYTKPSRLREEEPEESEPAAHSFASSEA------DDQEVSEENFEERK 774
>gi|115529449 upstream binding transcription factor, RNA polymerase
I isoform b [Homo sapiens]
Length = 727
Score = 64.3 bits (155), Expect = 3e-10
Identities = 37/95 (38%), Positives = 56/95 (58%), Gaps = 2/95 (2%)
Query: 238 GPSCSSASDKLPRVAKSKFFEDSEDESDEAE-EEEEDSEECSEEEDGYSSEEAENEEDED 296
GP+ S+ L ++S+ +D EDE DE E EEEED E EDG S E+ +E++ +
Sbjct: 624 GPNPKSSRTTLQSKSESEE-DDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESE 682
Query: 297 DTEEAEEDDEEEEEEMMVPGMEGKEEPGSDSGTTA 331
D +E EEDDE+E+++ E E GS S +++
Sbjct: 683 DGDENEEDDEDEDDDEDDDEDEDNESEGSSSSSSS 717
Score = 35.0 bits (79), Expect = 0.18
Identities = 22/90 (24%), Positives = 44/90 (48%), Gaps = 13/90 (14%)
Query: 217 NSERGTEAGQVGEPGIPTGEAGPSCSSASDKLPRVAKSKFFEDSED--ESDEAEEEEEDS 274
+ E E + E G + + G S S+S+ ++SED E++E +E+E+D
Sbjct: 649 DDEDEDEEEEDDENGDSSEDGGDSSESSSE-----------DESEDGDENEEDDEDEDDD 697
Query: 275 EECSEEEDGYSSEEAENEEDEDDTEEAEED 304
E+ E+ED S + + D+ +++ +
Sbjct: 698 EDDDEDEDNESEGSSSSSSSSGDSSDSDSN 727
Score = 33.9 bits (76), Expect = 0.39
Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Query: 250 RVAKSKFFEDSEDESDEAEEEEEDSEECSEEEDGYSSEEAENEEDEDDTEEAEEDDEE-E 308
R A ++ + + S + + S E+ E +ED++D +E EEDDE +
Sbjct: 605 RAAYKEYISNKRKSMTKLRGPNPKSSRTTLQSKSESEEDDEEDEDDEDEDEEEEDDENGD 664
Query: 309 EEEMMVPGMEGKEEPGSDSG 328
E E E S+ G
Sbjct: 665 SSEDGGDSSESSSEDESEDG 684
>gi|115529451 upstream binding transcription factor, RNA polymerase
I isoform b [Homo sapiens]
Length = 727
Score = 64.3 bits (155), Expect = 3e-10
Identities = 37/95 (38%), Positives = 56/95 (58%), Gaps = 2/95 (2%)
Query: 238 GPSCSSASDKLPRVAKSKFFEDSEDESDEAE-EEEEDSEECSEEEDGYSSEEAENEEDED 296
GP+ S+ L ++S+ +D EDE DE E EEEED E EDG S E+ +E++ +
Sbjct: 624 GPNPKSSRTTLQSKSESEE-DDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESE 682
Query: 297 DTEEAEEDDEEEEEEMMVPGMEGKEEPGSDSGTTA 331
D +E EEDDE+E+++ E E GS S +++
Sbjct: 683 DGDENEEDDEDEDDDEDDDEDEDNESEGSSSSSSS 717
Score = 35.0 bits (79), Expect = 0.18
Identities = 22/90 (24%), Positives = 44/90 (48%), Gaps = 13/90 (14%)
Query: 217 NSERGTEAGQVGEPGIPTGEAGPSCSSASDKLPRVAKSKFFEDSED--ESDEAEEEEEDS 274
+ E E + E G + + G S S+S+ ++SED E++E +E+E+D
Sbjct: 649 DDEDEDEEEEDDENGDSSEDGGDSSESSSE-----------DESEDGDENEEDDEDEDDD 697
Query: 275 EECSEEEDGYSSEEAENEEDEDDTEEAEED 304
E+ E+ED S + + D+ +++ +
Sbjct: 698 EDDDEDEDNESEGSSSSSSSSGDSSDSDSN 727
Score = 33.9 bits (76), Expect = 0.39
Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Query: 250 RVAKSKFFEDSEDESDEAEEEEEDSEECSEEEDGYSSEEAENEEDEDDTEEAEEDDEE-E 308
R A ++ + + S + + S E+ E +ED++D +E EEDDE +
Sbjct: 605 RAAYKEYISNKRKSMTKLRGPNPKSSRTTLQSKSESEEDDEEDEDDEDEDEEEEDDENGD 664
Query: 309 EEEMMVPGMEGKEEPGSDSG 328
E E E S+ G
Sbjct: 665 SSEDGGDSSESSSEDESEDG 684
>gi|7657671 upstream binding transcription factor, RNA polymerase I
isoform a [Homo sapiens]
Length = 764
Score = 64.3 bits (155), Expect = 3e-10
Identities = 37/95 (38%), Positives = 56/95 (58%), Gaps = 2/95 (2%)
Query: 238 GPSCSSASDKLPRVAKSKFFEDSEDESDEAE-EEEEDSEECSEEEDGYSSEEAENEEDED 296
GP+ S+ L ++S+ +D EDE DE E EEEED E EDG S E+ +E++ +
Sbjct: 661 GPNPKSSRTTLQSKSESEE-DDEEDEDDEDEDEEEEDDENGDSSEDGGDSSESSSEDESE 719
Query: 297 DTEEAEEDDEEEEEEMMVPGMEGKEEPGSDSGTTA 331
D +E EEDDE+E+++ E E GS S +++
Sbjct: 720 DGDENEEDDEDEDDDEDDDEDEDNESEGSSSSSSS 754
Score = 35.0 bits (79), Expect = 0.18
Identities = 22/90 (24%), Positives = 44/90 (48%), Gaps = 13/90 (14%)
Query: 217 NSERGTEAGQVGEPGIPTGEAGPSCSSASDKLPRVAKSKFFEDSED--ESDEAEEEEEDS 274
+ E E + E G + + G S S+S+ ++SED E++E +E+E+D
Sbjct: 686 DDEDEDEEEEDDENGDSSEDGGDSSESSSE-----------DESEDGDENEEDDEDEDDD 734
Query: 275 EECSEEEDGYSSEEAENEEDEDDTEEAEED 304
E+ E+ED S + + D+ +++ +
Sbjct: 735 EDDDEDEDNESEGSSSSSSSSGDSSDSDSN 764
Score = 33.9 bits (76), Expect = 0.39
Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Query: 250 RVAKSKFFEDSEDESDEAEEEEEDSEECSEEEDGYSSEEAENEEDEDDTEEAEEDDEE-E 308
R A ++ + + S + + S E+ E +ED++D +E EEDDE +
Sbjct: 642 RAAYKEYISNKRKSMTKLRGPNPKSSRTTLQSKSESEEDDEEDEDDEDEDEEEEDDENGD 701
Query: 309 EEEMMVPGMEGKEEPGSDSG 328
E E E S+ G
Sbjct: 702 SSEDGGDSSESSSEDESEDG 721
>gi|41349497 pyruvate dehydrogenase phosphatase isoenzyme 2 [Homo
sapiens]
Length = 529
Score = 61.6 bits (148), Expect = 2e-09
Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 33/171 (19%)
Query: 327 SGTTAVVALIRGKQLIVANAGDSRCVV-----SEAGKALDMSYDHKPEDEVELARIKNAG 381
SG TA +A + G L VANAGD R ++ + L ++ DH ++ EL+R+K
Sbjct: 265 SGATACMAHVDGIHLHVANAGDCRAILGVQEDNGMWSCLPLTRDHNAWNQAELSRLKREH 324
Query: 382 GK-----VTMDGRVNGGLNLSRAIGDHFYKRNKNL--------------------PPE-- 414
+ + M+ R+ G L RA GD K +K L PP
Sbjct: 325 PESEDRTIIMEDRLLGVLIPCRAFGDVQLKWSKELQRSILERGFNTEALNIYQFTPPHYY 384
Query: 415 -EQMISALPDIKVLTLTDDHEFMVIACDGIWNVMSSQEVVDFIQSKISQRD 464
++A P++ L +F+V+A DG+W+++S+++VV + +++ D
Sbjct: 385 TPPYLTAEPEVTYHRLRPQDKFLVLASDGLWDMLSNEDVVRLVVGHLAEAD 435
>gi|38788260 bromodomain PHD finger transcription factor isoform 2
[Homo sapiens]
Length = 2903
Score = 61.6 bits (148), Expect = 2e-09
Identities = 46/148 (31%), Positives = 64/148 (43%), Gaps = 11/148 (7%)
Query: 165 HKGPPHSKSGGGTGEEPGSQGLNGEAGPEDSTRETPSQENGPTAKAYTGFSSNSERGTEA 224
H+G + E L+ G S R+ P P + + G RG
Sbjct: 43 HRGSSRGRWAAAQAEVAPKTRLSSPRGGSSSRRKPPPPPPAPPSTSAPG------RGGRG 96
Query: 225 GQVGEPGIPTGEAGPSCSSASDKLPRVAKSKFFEDSEDESDEAEEEEEDSEECSEEEDGY 284
G G TG G A R A +K D + ES+E EEEE+ E EEEDG
Sbjct: 97 GGGGR----TGGGGGGGHLARTTAARRAVNKVVYD-DHESEEEEEEEDMVSEEEEEEDGD 151
Query: 285 SSEEAENEEDEDDTEEAEEDDEEEEEEM 312
+ E ++E+DE+D E ++DD + EEM
Sbjct: 152 AEETQDSEDDEEDEMEEDDDDSDYPEEM 179
Score = 33.5 bits (75), Expect = 0.51
Identities = 15/52 (28%), Positives = 30/52 (57%)
Query: 258 EDSEDESDEAEEEEEDSEECSEEEDGYSSEEAENEEDEDDTEEAEEDDEEEE 309
E++E + +E E + +D+E+ EE + S E+ +++ DD E + +E E
Sbjct: 574 EETEKDKNETENDSKDAEKNREEFEDQSLEKDSDDKTPDDDPEQGKSEEPTE 625
Score = 32.7 bits (73), Expect = 0.88
Identities = 18/45 (40%), Positives = 22/45 (48%)
Query: 282 DGYSSEEAENEEDEDDTEEAEEDDEEEEEEMMVPGMEGKEEPGSD 326
D + SEE E EED EE EED + EE + E + E D
Sbjct: 127 DDHESEEEEEEEDMVSEEEEEEDGDAEETQDSEDDEEDEMEEDDD 171
Score = 31.2 bits (69), Expect = 2.5
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 265 DEAEEEEEDSEECSEEEDGYSSEEAENEEDEDDTEEAEEDDEEEEEEMMVPGMEGKEEP 323
D + EE ++ +E E+ E EE ED + E + DD+ +++ P EEP
Sbjct: 568 DNVKSPEETEKDKNETENDSKDAEKNREEFEDQSLEKDSDDKTPDDD---PEQGKSEEP 623
>gi|38788274 bromodomain PHD finger transcription factor isoform 1
[Homo sapiens]
Length = 2920
Score = 61.6 bits (148), Expect = 2e-09
Identities = 46/148 (31%), Positives = 64/148 (43%), Gaps = 11/148 (7%)
Query: 165 HKGPPHSKSGGGTGEEPGSQGLNGEAGPEDSTRETPSQENGPTAKAYTGFSSNSERGTEA 224
H+G + E L+ G S R+ P P + + G RG
Sbjct: 43 HRGSSRGRWAAAQAEVAPKTRLSSPRGGSSSRRKPPPPPPAPPSTSAPG------RGGRG 96
Query: 225 GQVGEPGIPTGEAGPSCSSASDKLPRVAKSKFFEDSEDESDEAEEEEEDSEECSEEEDGY 284
G G TG G A R A +K D + ES+E EEEE+ E EEEDG
Sbjct: 97 GGGGR----TGGGGGGGHLARTTAARRAVNKVVYD-DHESEEEEEEEDMVSEEEEEEDGD 151
Query: 285 SSEEAENEEDEDDTEEAEEDDEEEEEEM 312
+ E ++E+DE+D E ++DD + EEM
Sbjct: 152 AEETQDSEDDEEDEMEEDDDDSDYPEEM 179
Score = 37.7 bits (86), Expect = 0.027
Identities = 34/154 (22%), Positives = 74/154 (48%), Gaps = 22/154 (14%)
Query: 258 EDSEDESDEAEEEEEDSEECSEE-EDGYSSEEAENEEDEDDTEEAEEDDEEEEEEMMVPG 316
E++E + +E E + +D+E+ EE ED ++++++ +DD E+ + + + + E
Sbjct: 574 EETEKDKNETENDSKDAEKNREEFEDQSLEKDSDDKTPDDDPEQGKSEVGDFKSEK--SN 631
Query: 317 MEGKEEPGSD---SGTTAVVALIRG---------KQLIVANAGDSRCVVSEAGKALDMSY 364
E E PG+ SG+T ++ +R Q + A A ++ + E + L ++
Sbjct: 632 GELSESPGAGKGASGSTRIITRLRNPDSKLSQLKSQQVAAAAHEANKLFKEGKEVLVVN- 690
Query: 365 DHKPEDEVELARIKNAGGKVTMDGRVNGGLNLSR 398
+ E++R+ + +V M G +N L +
Sbjct: 691 -----SQGEISRL-STKKEVIMKGNINNYFKLGQ 718
Score = 32.7 bits (73), Expect = 0.88
Identities = 18/45 (40%), Positives = 22/45 (48%)
Query: 282 DGYSSEEAENEEDEDDTEEAEEDDEEEEEEMMVPGMEGKEEPGSD 326
D + SEE E EED EE EED + EE + E + E D
Sbjct: 127 DDHESEEEEEEEDMVSEEEEEEDGDAEETQDSEDDEEDEMEEDDD 171
Score = 30.8 bits (68), Expect = 3.3
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Query: 265 DEAEEEEEDSEECSEEEDGYSSEEAENEEDEDDTEEAEEDDEEEEEEMMVPGMEGKEEPG 324
D + EE ++ +E E+ E EE ED + E + DD+ +++ +GK E G
Sbjct: 568 DNVKSPEETEKDKNETENDSKDAEKNREEFEDQSLEKDSDDKTPDDD----PEQGKSEVG 623
>gi|4759128 solute carrier family 24 (sodium/potassium/calcium
exchanger), member 1 [Homo sapiens]
Length = 1099
Score = 61.6 bits (148), Expect = 2e-09
Identities = 56/188 (29%), Positives = 80/188 (42%), Gaps = 32/188 (17%)
Query: 175 GGTGEEPGSQGLNGEAGPEDSTRETPSQENGPTAKAYTGFSSNSERGTEAGQVGEPGIPT 234
G E PG Q EA +ST E P +E + T S E E GE T
Sbjct: 735 GDQKENPGGQEDVAEA---ESTGEMPGEEGETAGEGETEEKSGGETQPE----GEGETET 787
Query: 235 GEAGPSCSSASDKLPRVAKSKFFEDSEDESD--------EAEEEEEDSEECSEE------ 280
G C ++ A+ K + EDE + + E E +S+E S E
Sbjct: 788 QGKGEECEDENE-----AEGKGDNEGEDEGEIHAEDGEMKGNEGETESQELSAENHGEAK 842
Query: 281 ------EDGYSSEEAENEEDEDDTEEAEEDDEEEEEEMMVPGMEGKEEPGSDSGTTAVVA 334
EDG S+ ++EE+E++ EE EE++EEEE+E E +EE G++ +
Sbjct: 843 NDEKGVEDGGGSDGGDSEEEEEEEEEQEEEEEEEEQEEEEEEEEEEEEKGNEEPLSLDWP 902
Query: 335 LIRGKQLI 342
R KQ I
Sbjct: 903 ETRQKQAI 910
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 61.6 bits (148), Expect = 2e-09
Identities = 68/276 (24%), Positives = 107/276 (38%), Gaps = 77/276 (27%)
Query: 123 EDEDEKEKVADEDDVDNEEAA-------LLHEEATMTIEELLTRYGQNCHKGPPHSKSGG 175
E+ED++E + E+ + +A LL E + +EELL +GP
Sbjct: 295 EEEDDEETIEVEEQQEGNDAEAQRREIELLRREGELPLEELLRSLPPQLLEGP------S 348
Query: 176 GTGEEPGSQGLNGEAGPEDSTRETPSQ--ENGPTAKAYT--------------GFSSNSE 219
+ P S + GPE+ E P Q E P A T F++N E
Sbjct: 349 SPSQTPSSHDSDTRDGPEEGAEEEPPQVLEIKPPPSAVTQRNKQPWHPDEDDEEFTANEE 408
Query: 220 RG-----------------------TEAGQVGEPGIP------TGEAGPSCSSASD---- 246
+E + GE + G P S+ D
Sbjct: 409 EAEDEEDTIAAEEQLEGEVDHAMELSELAREGELSMEELLQQYAGAYAPGSGSSEDEDED 468
Query: 247 -----------KLPRVAKSKFFEDSEDESDEAEEEEEDSE-ECSEEED---GYSSEEAEN 291
+ P A+ EDS +SD E+ ED E E SEEE+ +SEE+E+
Sbjct: 469 EVDANSSDCEPEGPVEAEEPPQEDSSSQSDSVEDRSEDEEDEHSEEEETSGSSASEESES 528
Query: 292 EEDEDDTEEAEEDDEEEEEEMMVPGMEGKEEPGSDS 327
EE ED +++ D+EEE+++ V + ++E S++
Sbjct: 529 EESEDAQSQSQADEEEEDDDFGVEYLLARDEEQSEA 564
Score = 33.1 bits (74), Expect = 0.67
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Query: 240 SCSSASDKLPRVAKSKFFEDSEDESDEAEEEEEDSEECSEEEDGYSSEEAENEEDEDDTE 299
S S+AS P ++ +D + + E+EEED EE E E+ +AE + E +
Sbjct: 268 SSSAASSPPPPASR---LDDEDGDFQPQEDEEEDDEETIEVEEQQEGNDAEAQRREIELL 324
Query: 300 EAEEDDEEEEEEMMVPG--MEGKEEP 323
E + EE +P +EG P
Sbjct: 325 RREGELPLEELLRSLPPQLLEGPSSP 350
Score = 31.6 bits (70), Expect = 2.0
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 87 EGKLQKALEDAFLAIDAKLTTEEVIKELAQI---AGRPTEDEDEKEKVADEDDVDNE 140
EG++ A+E + LA + +L+ EE++++ A +EDEDE E A+ D + E
Sbjct: 424 EGEVDHAMELSELAREGELSMEELLQQYAGAYAPGSGSSEDEDEDEVDANSSDCEPE 480
>gi|55956788 nucleolin [Homo sapiens]
Length = 710
Score = 60.5 bits (145), Expect = 4e-09
Identities = 65/275 (23%), Positives = 117/275 (42%), Gaps = 36/275 (13%)
Query: 123 EDEDEKEKVADEDDVDNEEAALLHEE----ATMTIEELLTRYGQNCHKGPPHSKSGGGTG 178
+ EDE+ +EDD EE + ++ A + ++++ + P K+ G
Sbjct: 27 DSEDEEMSEDEEDDSSGEEVVIPQKKGKKAAATSAKKVVVSPTKKVAVATPAKKAAVTPG 86
Query: 179 EEPGSQGLNGEAGPEDSTRETPSQENGPTAKAYTGFSSNSERGTEAGQ--VGEPGIPTGE 236
++ + TP+++ AKA T + ++G G+ V PG G
Sbjct: 87 KKAAA---------------TPAKKTVTPAKAVT---TPGKKGATPGKALVATPG-KKGA 127
Query: 237 AGPSCSSASDKLPRVAKSKFFEDSEDESDEAEEEEEDSEECSEEE---DGYSSEEAENEE 293
A P+ + + K + S ED + E DE ++E+ED +E E ++ A +E
Sbjct: 128 AIPAKGAKNGKNAKKEDSDEEEDDDSEEDEEDDEDEDEDEDEIEPAAMKAAAAAPASEDE 187
Query: 294 DEDDTEEAEEDDEEEEEEMMVPGMEGKEEPGSDSGTTAVVALIRGKQLI-----VANAGD 348
D++D E+ E+DD++EE++ ME G + A V ++ K + + D
Sbjct: 188 DDEDDEDDEDDDDDEEDDSEEEAMETTPAKGKKA---AKVVPVKAKNVAEDEDEEEDDED 244
Query: 349 SRCVVSEAGKALDMSYDHKPEDEVELARIKNAGGK 383
E + D D + E+E E +K A GK
Sbjct: 245 EDDDDDEDDEDDDDEDDEEEEEEEEEEPVKEAPGK 279
Score = 52.8 bits (125), Expect = 8e-07
Identities = 41/175 (23%), Positives = 68/175 (38%), Gaps = 40/175 (22%)
Query: 172 KSGGGTGEEPGSQGLNGEAGPEDSTRETPSQENGPTAKAYTGFSSNSERGTEAGQVGEPG 231
K G + G N + D + S+E+ + + + ++
Sbjct: 124 KKGAAIPAKGAKNGKNAKKEDSDEEEDDDSEEDE---------EDDEDEDEDEDEIEPAA 174
Query: 232 IPTGEAGPSCSSASDKLPRVAKSKFFEDSEDESDEAEEE--------------------- 270
+ A P+ D+ + +D +DE D++EEE
Sbjct: 175 MKAAAAAPASEDEDDEDDEDDE----DDDDDEEDDSEEEAMETTPAKGKKAAKVVPVKAK 230
Query: 271 ----EEDSEECSEEEDGYSSEEAENEEDEDDTEEAEEDDEEEEEEMMVPGMEGKE 321
+ED EE E+ED E+ E+++DEDD EE EE++EE +E PG KE
Sbjct: 231 NVAEDEDEEEDDEDEDDDDDEDDEDDDDEDDEEEEEEEEEEPVKE--APGKRKKE 283
Score = 47.4 bits (111), Expect = 3e-05
Identities = 24/79 (30%), Positives = 42/79 (53%)
Query: 253 KSKFFEDSEDESDEAEEEEEDSEECSEEEDGYSSEEAENEEDEDDTEEAEEDDEEEEEEM 312
K+K + EDE ++ E+E++D +E E++D EE E EE+E+ +EA ++E +
Sbjct: 228 KAKNVAEDEDEEEDDEDEDDDDDEDDEDDDDEDDEEEEEEEEEEPVKEAPGKRKKEMAKQ 287
Query: 313 MVPGMEGKEEPGSDSGTTA 331
K++ TTA
Sbjct: 288 KAAPEAKKQKVEGTEPTTA 306
Score = 30.8 bits (68), Expect = 3.3
Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 290 ENEEDEDDTEEAE-EDDEEEEEEMMVPGMEGKEEPGSDSGTTAV 332
E EED +D E +E E+D+ EE+++P +GK+ + + V
Sbjct: 23 EVEEDSEDEEMSEDEEDDSSGEEVVIPQKKGKKAAATSAKKVVV 66
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.306 0.128 0.360
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,465,520
Number of Sequences: 37866
Number of extensions: 1373778
Number of successful extensions: 44516
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 950
Number of HSP's successfully gapped in prelim test: 711
Number of HSP's that attempted gapping in prelim test: 9988
Number of HSP's gapped (non-prelim): 14548
length of query: 546
length of database: 18,247,518
effective HSP length: 107
effective length of query: 439
effective length of database: 14,195,856
effective search space: 6231980784
effective search space used: 6231980784
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.