Guide to the Human Genome
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Name: PPM1L Sequence: fasta or formatted (360aa) NCBI GI: 63003905
Description:

protein phosphatase 1 (formerly 2C)-like

Referenced in:

Serine / Threonine Protein Phosphatases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         19           2
 C cysteine            1.1          4           1
 D aspartate           7.8         28           1
 E glutamate           7.2         26           2
 F phenylalanine       5.0         18           2
 G glycine             5.8         21           2
 H histidine           2.5          9           1
 I isoleucine          6.1         22           1
 K lysine              6.9         25           1
 L leucine            11.7         42           2
 M methionine          2.8         10           1
 N asparagine          3.6         13           1
 P proline             3.1         11           1
 Q glutamine           3.3         12           2
 R arginine            5.6         20           2
 S serine              7.2         26           2
 T threonine           4.7         17           2
 V valine              6.4         23           2
 W tryptophan          1.1          4           1
 Y tyrosine            2.8         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein phosphatase 1 (formerly 2C)-like 
PPM1K                 0.151   protein phosphatase 1K (PP2C domain containing) [Ho...
PPM1B                 0.146   protein phosphatase 1B isoform 5 
PPM1B                 0.146   protein phosphatase 1B isoform 4 
PPM1B                 0.146   protein phosphatase 1B isoform 2 
PPM1B                 0.146   protein phosphatase 1B isoform 1 
PPM1A                 0.143   protein phosphatase 1A isoform 1 
PPM1A                 0.143   protein phosphatase 1A isoform 2 
PPM1A                 0.143   protein phosphatase 1A isoform 3 
PPM1E                 0.130   protein phosphatase 1E 
ILKAP                 0.130   integrin-linked kinase-associated protein phosphatas...
PPM1F                 0.125   protein phosphatase 1F 
FLJ40125              0.120   protein phosphatase 1B-like 
PPM1G                 0.108   protein phosphatase 1G 
PPM1G                 0.108   protein phosphatase 1G 
PHLPP1                0.073   PH domain and leucine rich repeat protein phosphatas...
PPM1D                 0.071   protein phosphatase 1D 
PHLPP2                0.066   PH domain and leucine rich repeat protein phosphatas...
PDP2                  0.056   pyruvate dehydrogenase phosphatase isoenzyme 2 [Homo...
PPM1M                 0.048   protein phosphatase 1M isoform a 
PDP1                  0.045   pyruvate dehyrogenase phosphatase catalytic subunit ...
PDP1                  0.045   pyruvate dehyrogenase phosphatase catalytic subunit...
PDP1                  0.045   pyruvate dehyrogenase phosphatase catalytic subunit...
PDP1                  0.045   pyruvate dehyrogenase phosphatase catalytic subunit...
PDP1                  0.045   pyruvate dehyrogenase phosphatase catalytic subunit...
PPM1M                 0.042   protein phosphatase 1M isoform b 
PPM1H                 0.042   protein phosphatase 1H (PP2C domain containing) [Ho...
MAP3K7IP1             0.030   mitogen-activated protein kinase kinase kinase 7 inte...
MAP3K7IP1             0.030   mitogen-activated protein kinase kinase kinase 7 int...
PPM1J                 0.019   protein phosphatase 1J (PP2C domain containing) [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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