Guide to the Human Genome
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Name: ILKAP Sequence: fasta or formatted (392aa) NCBI GI: 13540531
Description:

integrin-linked kinase-associated protein phosphatase 2C

Referenced in:

Serine / Threonine Protein Phosphatases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.4         33           2
 C cysteine            2.6         10           1
 D aspartate           6.4         25           2
 E glutamate           7.9         31           3
 F phenylalanine       3.6         14           1
 G glycine             7.9         31           2
 H histidine           1.8          7           1
 I isoleucine          4.6         18           1
 K lysine              7.4         29           2
 L leucine             8.4         33           2
 M methionine          1.3          5           1
 N asparagine          3.6         14           1
 P proline             4.6         18           2
 Q glutamine           3.6         14           1
 R arginine            6.6         26           2
 S serine              8.4         33           2
 T threonine           4.3         17           1
 V valine              6.6         26           2
 W tryptophan          0.3          1           1
 Y tyrosine            1.8          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   integrin-linked kinase-associated protein phosphatas... 
PPM1F                 0.132   protein phosphatase 1F 
PPM1E                 0.128   protein phosphatase 1E 
PPM1A                 0.126   protein phosphatase 1A isoform 1 
PPM1A                 0.126   protein phosphatase 1A isoform 2 
PPM1A                 0.126   protein phosphatase 1A isoform 3 
PPM1L                 0.119   protein phosphatase 1 (formerly 2C)-like 
PPM1B                 0.116   protein phosphatase 1B isoform 5 
PPM1B                 0.116   protein phosphatase 1B isoform 4 
PPM1B                 0.116   protein phosphatase 1B isoform 2 
PPM1B                 0.116   protein phosphatase 1B isoform 1 
PPM1K                 0.115   protein phosphatase 1K (PP2C domain containing) [Ho...
FLJ40125              0.106   protein phosphatase 1B-like 
PPM1G                 0.085   protein phosphatase 1G 
PPM1G                 0.085   protein phosphatase 1G 
PPM1D                 0.060   protein phosphatase 1D 
PDP1                  0.050   pyruvate dehyrogenase phosphatase catalytic subunit ...
PDP1                  0.050   pyruvate dehyrogenase phosphatase catalytic subunit...
PDP1                  0.050   pyruvate dehyrogenase phosphatase catalytic subunit...
PDP1                  0.050   pyruvate dehyrogenase phosphatase catalytic subunit...
PDP1                  0.050   pyruvate dehyrogenase phosphatase catalytic subunit...
PDP2                  0.042   pyruvate dehydrogenase phosphatase isoenzyme 2 [Homo...
MAP3K7IP1             0.036   mitogen-activated protein kinase kinase kinase 7 inte...
MAP3K7IP1             0.036   mitogen-activated protein kinase kinase kinase 7 int...
PHLPP1                0.034   PH domain and leucine rich repeat protein phosphatas...
PPM1H                 0.028   protein phosphatase 1H (PP2C domain containing) [Ho...
PPM1M                 0.026   protein phosphatase 1M isoform a 
PPM1M                 0.025   protein phosphatase 1M isoform b 
PPM1J                 0.021   protein phosphatase 1J (PP2C domain containing) [Hom...
PHLPP2                0.020   PH domain and leucine rich repeat protein phosphatas...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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