Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: PPM1K Sequence: fasta or formatted (372aa) NCBI GI: 167466276
Description:

protein phosphatase 1K (PP2C domain containing)

Referenced in:

Serine / Threonine Protein Phosphatases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         30           3
 C cysteine            2.4          9           1
 D aspartate           7.3         27           2
 E glutamate           5.6         21           1
 F phenylalanine       4.3         16           1
 G glycine             7.0         26           2
 H histidine           3.0         11           2
 I isoleucine          5.6         21           1
 K lysine              5.6         21           2
 L leucine             8.9         33           2
 M methionine          1.6          6           1
 N asparagine          4.0         15           1
 P proline             4.6         17           2
 Q glutamine           2.4          9           1
 R arginine            6.2         23           3
 S serine              8.3         31           2
 T threonine           6.7         25           2
 V valine              5.6         21           3
 W tryptophan          1.3          5           1
 Y tyrosine            1.3          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein phosphatase 1K (PP2C domain containing) [Ho... 
PPM1L                 0.144   protein phosphatase 1 (formerly 2C)-like 
ILKAP                 0.119   integrin-linked kinase-associated protein phosphatas...
PPM1A                 0.118   protein phosphatase 1A isoform 1 
PPM1A                 0.118   protein phosphatase 1A isoform 2 
PPM1A                 0.118   protein phosphatase 1A isoform 3 
PPM1E                 0.116   protein phosphatase 1E 
PPM1F                 0.107   protein phosphatase 1F 
PPM1B                 0.104   protein phosphatase 1B isoform 5 
PPM1B                 0.104   protein phosphatase 1B isoform 4 
PPM1B                 0.104   protein phosphatase 1B isoform 2 
PPM1B                 0.104   protein phosphatase 1B isoform 1 
FLJ40125              0.081   protein phosphatase 1B-like 
PPM1G                 0.081   protein phosphatase 1G 
PPM1G                 0.081   protein phosphatase 1G 
PPM1D                 0.063   protein phosphatase 1D 
PHLPP1                0.049   PH domain and leucine rich repeat protein phosphatas...
PHLPP2                0.036   PH domain and leucine rich repeat protein phosphatas...
MAP3K7IP1             0.033   mitogen-activated protein kinase kinase kinase 7 inte...
MAP3K7IP1             0.033   mitogen-activated protein kinase kinase kinase 7 int...
PDP1                  0.027   pyruvate dehyrogenase phosphatase catalytic subunit ...
PDP1                  0.027   pyruvate dehyrogenase phosphatase catalytic subunit...
PDP1                  0.027   pyruvate dehyrogenase phosphatase catalytic subunit...
PDP1                  0.027   pyruvate dehyrogenase phosphatase catalytic subunit...
PDP1                  0.027   pyruvate dehyrogenase phosphatase catalytic subunit...
PPM1H                 0.023   protein phosphatase 1H (PP2C domain containing) [Ho...
PDP2                  0.021   pyruvate dehydrogenase phosphatase isoenzyme 2 [Homo...
PPM1M                 0.019   protein phosphatase 1M isoform a 
PPM1M                 0.016   protein phosphatase 1M isoform b 
PPM1J                 0.016   protein phosphatase 1J (PP2C domain containing) [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press