Search of human proteins with 4505921

Search of human proteins with 4505921

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4505921 phenylethanolamine N-methyltransferase [Homo
sapiens]
         (282 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4505921 phenylethanolamine N-methyltransferase [Homo sapiens]      578   e-165
gi|66933018 indolethylamine N-methyltransferase [Homo sapiens]        178   5e-45
gi|5453790 nicotinamide N-methyltransferase [Homo sapiens]            172   3e-43
gi|157412249 RUN and SH3 domain containing 1 isoform c [Homo sap...    36   0.033
gi|157412247 RUN and SH3 domain containing 1 isoform b [Homo sap...    36   0.033
gi|157412245 RUN and SH3 domain containing 1 isoform a [Homo sap...    36   0.033
gi|42476123 RUN and SH3 domain containing 1 isoform d [Homo sapi...    36   0.033
gi|114155133 dynein, axonemal, heavy chain 9 isoform 2 [Homo sap...    35   0.074
gi|93141204 methyltransferase like 2B [Homo sapiens]                   33   0.22 
gi|165932358 methyltransferase like 2A [Homo sapiens]                  33   0.22 
gi|40807477 retinoic acid induced 1 [Homo sapiens]                     32   0.48 
gi|122937271 WAS protein homolog associated with actin, golgi me...    30   2.4  
gi|172072602 Fc receptor, IgA, IgM, high affinity isoform 2 [Hom...    30   3.1  
gi|153791755 cyclin domain containing [Homo sapiens]                   29   4.1  
gi|33350932 cytoplasmic dynein 1 heavy chain 1 [Homo sapiens]          29   4.1  
gi|222144229 APG7 autophagy 7-like isoform c [Homo sapiens]            29   5.3  
gi|222144227 APG7 autophagy 7-like isoform b [Homo sapiens]            29   5.3  
gi|5453668 APG7 autophagy 7-like isoform a [Homo sapiens]              29   5.3  
gi|198442844 dynein, axonemal, heavy chain 10 [Homo sapiens]           28   6.9  
gi|4758392 forkhead box D1 [Homo sapiens]                              28   6.9  
gi|239756957 PREDICTED: dynein, axonemal, heavy chain 17 [Homo s...    28   9.0  
gi|239751459 PREDICTED: dynein, axonemal, heavy chain 17 [Homo s...    28   9.0  
gi|239745966 PREDICTED: dynein, axonemal, heavy chain 17 [Homo s...    28   9.0  
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo...    28   9.0  
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ...    28   9.0  
gi|158303333 synaptopodin isoform B [Homo sapiens]                     28   9.0  
gi|40353727 synaptopodin isoform A [Homo sapiens]                      28   9.0  
gi|148612816 RecQ protein-like 5 isoform 1 [Homo sapiens]              28   9.0  
gi|51242943 RecQ protein-like 5 isoform 3 [Homo sapiens]               28   9.0  
gi|51242947 RecQ protein-like 5 isoform 2 [Homo sapiens]               28   9.0  

>gi|4505921 phenylethanolamine N-methyltransferase [Homo sapiens]
          Length = 282

 Score =  578 bits (1490), Expect = e-165
 Identities = 282/282 (100%), Positives = 282/282 (100%)

Query: 1   MSGADRSPNAGAAPDSAPGQAAVASAYQRFEPRAYLRNNYAPPRGDLCNPNGVGPWKLRC 60
           MSGADRSPNAGAAPDSAPGQAAVASAYQRFEPRAYLRNNYAPPRGDLCNPNGVGPWKLRC
Sbjct: 1   MSGADRSPNAGAAPDSAPGQAAVASAYQRFEPRAYLRNNYAPPRGDLCNPNGVGPWKLRC 60

Query: 61  LAQTFATGEVSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGA 120
           LAQTFATGEVSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGA
Sbjct: 61  LAQTFATGEVSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGA 120

Query: 121 FNWSMYSQHACLIEGKGECWQDKERQLRARVKRVLPIDVHQPQPLGAGSPAPLPADALVS 180
           FNWSMYSQHACLIEGKGECWQDKERQLRARVKRVLPIDVHQPQPLGAGSPAPLPADALVS
Sbjct: 121 FNWSMYSQHACLIEGKGECWQDKERQLRARVKRVLPIDVHQPQPLGAGSPAPLPADALVS 180

Query: 181 AFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLAGEARLTVVPVSEEEVR 240
           AFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLAGEARLTVVPVSEEEVR
Sbjct: 181 AFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLAGEARLTVVPVSEEEVR 240

Query: 241 EALVRSGYKVRDLRTYIMPAHLQTGVDDVKGVFFAWAQKVGL 282
           EALVRSGYKVRDLRTYIMPAHLQTGVDDVKGVFFAWAQKVGL
Sbjct: 241 EALVRSGYKVRDLRTYIMPAHLQTGVDDVKGVFFAWAQKVGL 282


>gi|66933018 indolethylamine N-methyltransferase [Homo sapiens]
          Length = 263

 Score =  178 bits (451), Expect = 5e-45
 Identities = 96/234 (41%), Positives = 145/234 (61%), Gaps = 16/234 (6%)

Query: 27  YQR-FEPRAYLRNNYA-----PPRGDLCNPNGVGPWKLRCLAQTFATGEVSGRTLIDIGS 80
           YQ+ F PR YL   Y+      P  ++   N      L CL +TF  G + G TLIDIGS
Sbjct: 11  YQKHFLPRDYLATYYSFDGSPSPEAEMLKFN------LECLHKTFGPGGLQGDTLIDIGS 64

Query: 81  GPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECW 140
           GPT+YQ+L+AC  F+DIT++DF + NR+EL +WL++EPGA++W+   + AC +EG    W
Sbjct: 65  GPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRW 124

Query: 141 QDKERQLRARVKRVLPIDVHQPQPLGAGSPAPLP-ADALVSAFCLEAVSPDLASFQRALD 199
           ++KE +LRA VKRVL  DVH   PL   +PA LP AD +++   +E     L +++ AL 
Sbjct: 125 EEKEEKLRAAVKRVLKCDVHLGNPL---APAVLPLADCVLTLLAMECACCSLDAYRAALC 181

Query: 200 HITTLLRPGGHLLLIGALEESWYLAGEARLTVVPVSEEEVREALVRSGYKVRDL 253
           ++ +LL+PGGHL+    L    Y+ G+   + V + +EEV +A++ +G+ +  L
Sbjct: 182 NLASLLKPGGHLVTTVTLRLPSYMVGKREFSCVALEKEEVEQAVLDAGFDIEQL 235


>gi|5453790 nicotinamide N-methyltransferase [Homo sapiens]
          Length = 264

 Score =  172 bits (436), Expect = 3e-43
 Identities = 89/193 (46%), Positives = 128/193 (66%), Gaps = 2/193 (1%)

Query: 58  LRCLAQTFATGEVSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEE 117
           L+ L + F    V G  LIDIGSGPT+YQLLSAC  F++I +TD+ + N QEL +WL++E
Sbjct: 42  LKNLFKIFCLDGVKGDLLIDIGSGPTIYQLLSACESFKEIVVTDYSDQNLQELEKWLKKE 101

Query: 118 PGAFNWSMYSQHACLIEGKGECWQDKERQLRARVKRVLPIDVHQPQPLGAGSPAPLPADA 177
           P AF+WS    + C +EG      +KE +LR  VK+VL  DV Q QPLGA  P P PAD 
Sbjct: 102 PEAFDWSPVVTYVCDLEGNRVKGPEKEEKLRQAVKQVLKCDVTQSQPLGA-VPLP-PADC 159

Query: 178 LVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLAGEARLTVVPVSEE 237
           ++S  CL+A  PDL ++ RAL ++ +LL+PGG L+++ AL+ S+Y+ GE + + +P+  E
Sbjct: 160 VLSTLCLDAACPDLPTYCRALRNLGSLLKPGGFLVIMDALKSSYYMIGEQKFSSLPLGRE 219

Query: 238 EVREALVRSGYKV 250
            V  A+  +GY +
Sbjct: 220 AVEAAVKEAGYTI 232


>gi|157412249 RUN and SH3 domain containing 1 isoform c [Homo
           sapiens]
          Length = 492

 Score = 36.2 bits (82), Expect = 0.033
 Identities = 34/126 (26%), Positives = 49/126 (38%), Gaps = 13/126 (10%)

Query: 111 GRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRARVKRVLPIDVHQPQPLGAGSP 170
           G WL    G       +++  L   +   W      + A VKR  P ++  PQ L A +P
Sbjct: 371 GLWLGRLFGVPGGPAENENGALKSRRPSSWLPPTVSVLALVKRGAPPEMPSPQELEASAP 430

Query: 171 APLPADALVSAFC-LEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLAGEARL 229
             +     V A C   A  PD  SF+R           G  L +I  ++E W   G   +
Sbjct: 431 RMVQTHRAVRALCDHTAARPDQLSFRR-----------GEVLRVITTVDEDWLRCGRDGM 479

Query: 230 T-VVPV 234
             +VPV
Sbjct: 480 EGLVPV 485


>gi|157412247 RUN and SH3 domain containing 1 isoform b [Homo
           sapiens]
          Length = 796

 Score = 36.2 bits (82), Expect = 0.033
 Identities = 34/126 (26%), Positives = 49/126 (38%), Gaps = 13/126 (10%)

Query: 111 GRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRARVKRVLPIDVHQPQPLGAGSP 170
           G WL    G       +++  L   +   W      + A VKR  P ++  PQ L A +P
Sbjct: 675 GLWLGRLFGVPGGPAENENGALKSRRPSSWLPPTVSVLALVKRGAPPEMPSPQELEASAP 734

Query: 171 APLPADALVSAFC-LEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLAGEARL 229
             +     V A C   A  PD  SF+R           G  L +I  ++E W   G   +
Sbjct: 735 RMVQTHRAVRALCDHTAARPDQLSFRR-----------GEVLRVITTVDEDWLRCGRDGM 783

Query: 230 T-VVPV 234
             +VPV
Sbjct: 784 EGLVPV 789


>gi|157412245 RUN and SH3 domain containing 1 isoform a [Homo
           sapiens]
          Length = 902

 Score = 36.2 bits (82), Expect = 0.033
 Identities = 34/126 (26%), Positives = 49/126 (38%), Gaps = 13/126 (10%)

Query: 111 GRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRARVKRVLPIDVHQPQPLGAGSP 170
           G WL    G       +++  L   +   W      + A VKR  P ++  PQ L A +P
Sbjct: 781 GLWLGRLFGVPGGPAENENGALKSRRPSSWLPPTVSVLALVKRGAPPEMPSPQELEASAP 840

Query: 171 APLPADALVSAFC-LEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLAGEARL 229
             +     V A C   A  PD  SF+R           G  L +I  ++E W   G   +
Sbjct: 841 RMVQTHRAVRALCDHTAARPDQLSFRR-----------GEVLRVITTVDEDWLRCGRDGM 889

Query: 230 T-VVPV 234
             +VPV
Sbjct: 890 EGLVPV 895


>gi|42476123 RUN and SH3 domain containing 1 isoform d [Homo
           sapiens]
          Length = 433

 Score = 36.2 bits (82), Expect = 0.033
 Identities = 34/126 (26%), Positives = 49/126 (38%), Gaps = 13/126 (10%)

Query: 111 GRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRARVKRVLPIDVHQPQPLGAGSP 170
           G WL    G       +++  L   +   W      + A VKR  P ++  PQ L A +P
Sbjct: 312 GLWLGRLFGVPGGPAENENGALKSRRPSSWLPPTVSVLALVKRGAPPEMPSPQELEASAP 371

Query: 171 APLPADALVSAFC-LEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLAGEARL 229
             +     V A C   A  PD  SF+R           G  L +I  ++E W   G   +
Sbjct: 372 RMVQTHRAVRALCDHTAARPDQLSFRR-----------GEVLRVITTVDEDWLRCGRDGM 420

Query: 230 T-VVPV 234
             +VPV
Sbjct: 421 EGLVPV 426


>gi|114155133 dynein, axonemal, heavy chain 9 isoform 2 [Homo sapiens]
          Length = 4486

 Score = 35.0 bits (79), Expect = 0.074
 Identities = 32/124 (25%), Positives = 59/124 (47%), Gaps = 21/124 (16%)

Query: 166  GAGSPAPLPADA--LVSAFCLEAVSP--------DLASFQRALDHITTLLR----PGGHL 211
            G G P  +P  +  L++   +EA+          DL  F+ A+ H+  + R    P G+ 
Sbjct: 2762 GIGEPKYMPVQSWELLTQTLVEALENHNEVNTVMDLVLFEDAMRHVCHINRILESPRGNA 2821

Query: 212  LLIGALEESWYLAGEARLTVVP--VSEEEVREALVRSGYKVRDLRTYIMPAHLQTGVDDV 269
            LL+G        +G+  LT +   +S  +V +  +R GY+++D +  +    L+ GV ++
Sbjct: 2822 LLVGVGG-----SGKQSLTRLAAFISSMDVFQITLRKGYQIQDFKMDLASLCLKAGVKNL 2876

Query: 270  KGVF 273
              VF
Sbjct: 2877 NTVF 2880


>gi|93141204 methyltransferase like 2B [Homo sapiens]
          Length = 378

 Score = 33.5 bits (75), Expect = 0.22
 Identities = 20/56 (35%), Positives = 31/56 (55%), Gaps = 7/56 (12%)

Query: 158 DVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLL 213
           D  +  P+  GS      D ++  F L AV PD    Q+A++ ++ LL+PGG +LL
Sbjct: 242 DEEKSYPVPKGS-----LDIIILIFVLSAVVPD--KMQKAINRLSRLLKPGGMVLL 290


>gi|165932358 methyltransferase like 2A [Homo sapiens]
          Length = 378

 Score = 33.5 bits (75), Expect = 0.22
 Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 7/56 (12%)

Query: 158 DVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLL 213
           D  +  P+  GS      D ++  F L A+ PD    Q+A++ ++ LL+PGG +LL
Sbjct: 242 DEEKSYPVPKGS-----LDIIILIFVLSAIVPD--KMQKAINRLSRLLKPGGMMLL 290


>gi|40807477 retinoic acid induced 1 [Homo sapiens]
          Length = 1906

 Score = 32.3 bits (72), Expect = 0.48
 Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 3/52 (5%)

Query: 115  QEEPGAFNWSMYSQHACLIEGKGECWQD---KERQLRARVKRVLPIDVHQPQ 163
            Q++PG  N+S YS+   L  G+ +       K R  R R ++VLP+D  +P+
Sbjct: 1523 QKQPGHTNYSSYSKRKRLTRGRAKNTTSSPCKGRAKRRRQQQVLPLDPAEPE 1574


>gi|122937271 WAS protein homolog associated with actin, golgi
           membranes and microtubules [Homo sapiens]
          Length = 809

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 16/40 (40%), Positives = 22/40 (55%)

Query: 156 PIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQ 195
           P+   QP+PL   SPA  P D+L S  C  ++   LAS +
Sbjct: 679 PVKDDQPRPLVCESPAERPRDSLESFSCPGSMDEVLASLR 718


>gi|172072602 Fc receptor, IgA, IgM, high affinity isoform 2 [Homo
           sapiens]
          Length = 552

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 25/85 (29%), Positives = 35/85 (41%), Gaps = 19/85 (22%)

Query: 43  PRGDLCNPNGVGPW----KLRCLAQTFATGEVSGRTLIDIGSGPTVYQLLS--------- 89
           P+  L     VGPW    K   + +TF   E S RTL  + +   ++ L++         
Sbjct: 436 PQATLSQTPAVGPWGPPGKESSVKRTFPEDESSSRTLAPVSTMLALFMLMALVLLQRKLW 495

Query: 90  ---ACSHFEDIT---MTDFLEVNRQ 108
                   E +T   MT FLEVN Q
Sbjct: 496 RRRTSQEAERVTLIQMTHFLEVNPQ 520


>gi|153791755 cyclin domain containing [Homo sapiens]
          Length = 350

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 14/37 (37%), Positives = 22/37 (59%)

Query: 141 QDKERQLRARVKRVLPIDVHQPQPLGAGSPAPLPADA 177
           +D ++ LRA VK+     + + QPL   +P PLP D+
Sbjct: 19  RDNDQNLRAPVKKSRRPRLRRKQPLHPLNPCPLPGDS 55


>gi|33350932 cytoplasmic dynein 1 heavy chain 1 [Homo sapiens]
          Length = 4646

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 28/92 (30%), Positives = 39/92 (42%), Gaps = 19/92 (20%)

Query: 177  ALVSAFCLEAVSPDLASFQRALDHITTLLR----PGGHLLLIGA-----LEESWYLAGEA 227
            A +  F  E +   L  F   LDH+  + R    P GHLLLIG         S ++A   
Sbjct: 2895 ARLKVFYEEELDVPLVLFNEVLDHVLRIDRIFRQPQGHLLLIGVSGAGKTTLSRFVAWMN 2954

Query: 228  RLTVVPVS----------EEEVREALVRSGYK 249
             L+V  +           +E++R  L RSG K
Sbjct: 2955 GLSVYQIKVHRKYTGEDFDEDLRTVLRRSGCK 2986


>gi|222144229 APG7 autophagy 7-like isoform c [Homo sapiens]
          Length = 623

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 16/44 (36%), Positives = 23/44 (52%)

Query: 165 LGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPG 208
           LG+   A +P   L   FC + V+P  ++  R LD   T+ RPG
Sbjct: 496 LGSSLFANIPGYKLGCYFCNDVVAPGDSTRDRTLDQQCTVSRPG 539


>gi|222144227 APG7 autophagy 7-like isoform b [Homo sapiens]
          Length = 676

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 16/44 (36%), Positives = 23/44 (52%)

Query: 165 LGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPG 208
           LG+   A +P   L   FC + V+P  ++  R LD   T+ RPG
Sbjct: 535 LGSSLFANIPGYKLGCYFCNDVVAPGDSTRDRTLDQQCTVSRPG 578


>gi|5453668 APG7 autophagy 7-like isoform a [Homo sapiens]
          Length = 703

 Score = 28.9 bits (63), Expect = 5.3
 Identities = 16/44 (36%), Positives = 23/44 (52%)

Query: 165 LGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPG 208
           LG+   A +P   L   FC + V+P  ++  R LD   T+ RPG
Sbjct: 535 LGSSLFANIPGYKLGCYFCNDVVAPGDSTRDRTLDQQCTVSRPG 578


>gi|198442844 dynein, axonemal, heavy chain 10 [Homo sapiens]
          Length = 4471

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 7/88 (7%)

Query: 190  DLASFQRALDHITTLLR----PGGHLLLIGALEESWYLAGEARLTVVPVSEEEVREALVR 245
            +L  F  AL+H+T + R      GH LL+G           +RL     S E V E L+ 
Sbjct: 2774 NLVLFDDALEHLTRVHRIIRMDRGHALLVGVGGSG--KQSLSRLAAFTASCE-VFEILLS 2830

Query: 246  SGYKVRDLRTYIMPAHLQTGVDDVKGVF 273
             GY     R  +   +L+ G+++   +F
Sbjct: 2831 RGYSENSFREDLKSLYLKLGIENKAMIF 2858


>gi|4758392 forkhead box D1 [Homo sapiens]
          Length = 465

 Score = 28.5 bits (62), Expect = 6.9
 Identities = 11/18 (61%), Positives = 13/18 (72%)

Query: 160 HQPQPLGAGSPAPLPADA 177
           ++P PLGA  P PLPA A
Sbjct: 329 YRPHPLGAALPGPLPASA 346


>gi|239756957 PREDICTED: dynein, axonemal, heavy chain 17 [Homo
            sapiens]
          Length = 4470

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 11/90 (12%)

Query: 190  DLASFQRALDHITTLLR----PGGHLLLIGALEESWYLAGEARLTVVP--VSEEEVREAL 243
            +L  F+ A+ HI  + R    P G+ LL+G        +G+  L+ +   +S  +V +  
Sbjct: 2781 NLVLFEDAVAHICRINRILESPRGNALLVGVGG-----SGKQSLSRLAAYISGLDVFQIT 2835

Query: 244  VRSGYKVRDLRTYIMPAHLQTGVDDVKGVF 273
            ++ GY + DL+  +   +++  V +V  VF
Sbjct: 2836 LKKGYGIPDLKIDLAAQYIKAAVKNVPSVF 2865


>gi|239751459 PREDICTED: dynein, axonemal, heavy chain 17 [Homo
            sapiens]
          Length = 4485

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 11/90 (12%)

Query: 190  DLASFQRALDHITTLLR----PGGHLLLIGALEESWYLAGEARLTVVP--VSEEEVREAL 243
            +L  F+ A+ HI  + R    P G+ LL+G        +G+  L+ +   +S  +V +  
Sbjct: 2758 NLVLFEDAVAHICRINRILESPRGNALLVGVGG-----SGKQSLSRLAAYISGLDVFQIT 2812

Query: 244  VRSGYKVRDLRTYIMPAHLQTGVDDVKGVF 273
            ++ GY + DL+  +   +++  V +V  VF
Sbjct: 2813 LKKGYGIPDLKIDLAAQYIKAAVKNVPSVF 2842


>gi|239745966 PREDICTED: dynein, axonemal, heavy chain 17 [Homo
            sapiens]
          Length = 4485

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 11/90 (12%)

Query: 190  DLASFQRALDHITTLLR----PGGHLLLIGALEESWYLAGEARLTVVP--VSEEEVREAL 243
            +L  F+ A+ HI  + R    P G+ LL+G        +G+  L+ +   +S  +V +  
Sbjct: 2758 NLVLFEDAVAHICRINRILESPRGNALLVGVGG-----SGKQSLSRLAAYISGLDVFQIT 2812

Query: 244  VRSGYKVRDLRTYIMPAHLQTGVDDVKGVF 273
            ++ GY + DL+  +   +++  V +V  VF
Sbjct: 2813 LKKGYGIPDLKIDLAAQYIKAAVKNVPSVF 2842


>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
           sapiens]
          Length = 503

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 13  APDSAPGQAAVASAYQRFEPRAYLRNNYAPPRGDL-CNPNGVGP 55
           +P S PG+  V S   R  P    RN   PPR D+   P+ + P
Sbjct: 142 SPPSGPGRFPVPSPGHRSGPPEPQRNRMPPPRPDVGSKPDSIPP 185


>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
           sapiens]
          Length = 503

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 13  APDSAPGQAAVASAYQRFEPRAYLRNNYAPPRGDL-CNPNGVGP 55
           +P S PG+  V S   R  P    RN   PPR D+   P+ + P
Sbjct: 142 SPPSGPGRFPVPSPGHRSGPPEPQRNRMPPPRPDVGSKPDSIPP 185


>gi|158303333 synaptopodin isoform B [Homo sapiens]
          Length = 685

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 8   PNAGAAPDSAPGQAAVASAYQRFEPRAYLRNNYAPPRGDL-CNPNGVGPWKLR 59
           P++   P +APG   VAS      P A L + Y P  G L   P    P++LR
Sbjct: 516 PSSWKYPTNAPGAFRVASRSPARTPPASLYHGYLPENGVLRPEPTKQPPYQLR 568


>gi|40353727 synaptopodin isoform A [Homo sapiens]
          Length = 903

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 8   PNAGAAPDSAPGQAAVASAYQRFEPRAYLRNNYAPPRGDL-CNPNGVGPWKLR 59
           P++   P +APG   VAS      P A L + Y P  G L   P    P++LR
Sbjct: 516 PSSWKYPTNAPGAFRVASRSPARTPPASLYHGYLPENGVLRPEPTKQPPYQLR 568


>gi|148612816 RecQ protein-like 5 isoform 1 [Homo sapiens]
          Length = 991

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 23/83 (27%), Positives = 33/83 (39%), Gaps = 20/83 (24%)

Query: 142 DKERQLRARVKRVLPID--------------------VHQPQPLGAGSPAPLPADALVSA 181
           D ER++R+ +K+V   D                    V    P GAG        AL++ 
Sbjct: 11  DPERRVRSTLKKVFGFDSFKTPLQESATMAVVKGNKDVFVCMPTGAGKSLCYQLPALLAK 70

Query: 182 FCLEAVSPDLASFQRALDHITTL 204
                VSP +A  Q  +DH+ TL
Sbjct: 71  GITIVVSPLIALIQDQVDHLLTL 93


>gi|51242943 RecQ protein-like 5 isoform 3 [Homo sapiens]
          Length = 410

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 23/83 (27%), Positives = 33/83 (39%), Gaps = 20/83 (24%)

Query: 142 DKERQLRARVKRVLPID--------------------VHQPQPLGAGSPAPLPADALVSA 181
           D ER++R+ +K+V   D                    V    P GAG        AL++ 
Sbjct: 11  DPERRVRSTLKKVFGFDSFKTPLQESATMAVVKGNKDVFVCMPTGAGKSLCYQLPALLAK 70

Query: 182 FCLEAVSPDLASFQRALDHITTL 204
                VSP +A  Q  +DH+ TL
Sbjct: 71  GITIVVSPLIALIQDQVDHLLTL 93


>gi|51242947 RecQ protein-like 5 isoform 2 [Homo sapiens]
          Length = 435

 Score = 28.1 bits (61), Expect = 9.0
 Identities = 23/83 (27%), Positives = 33/83 (39%), Gaps = 20/83 (24%)

Query: 142 DKERQLRARVKRVLPID--------------------VHQPQPLGAGSPAPLPADALVSA 181
           D ER++R+ +K+V   D                    V    P GAG        AL++ 
Sbjct: 11  DPERRVRSTLKKVFGFDSFKTPLQESATMAVVKGNKDVFVCMPTGAGKSLCYQLPALLAK 70

Query: 182 FCLEAVSPDLASFQRALDHITTL 204
                VSP +A  Q  +DH+ TL
Sbjct: 71  GITIVVSPLIALIQDQVDHLLTL 93


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.136    0.422 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,362,914
Number of Sequences: 37866
Number of extensions: 613285
Number of successful extensions: 1773
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 1754
Number of HSP's gapped (non-prelim): 33
length of query: 282
length of database: 18,247,518
effective HSP length: 101
effective length of query: 181
effective length of database: 14,423,052
effective search space: 2610572412
effective search space used: 2610572412
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.