Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 4505349
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4505349 necdin [Homo sapiens]
(321 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4505349 necdin [Homo sapiens] 649 0.0
gi|29171705 melanoma antigen family D, 2 [Homo sapiens] 191 7e-49
gi|19387846 melanoma antigen family D, 2 [Homo sapiens] 191 7e-49
gi|41350320 melanoma antigen family D, 2 [Homo sapiens] 191 7e-49
gi|89276766 trophinin isoform 5 [Homo sapiens] 183 2e-46
gi|29540551 trophinin isoform 2 [Homo sapiens] 183 2e-46
gi|29540541 trophinin isoform 2 [Homo sapiens] 183 2e-46
gi|20162572 necdin-like 2 [Homo sapiens] 183 2e-46
gi|29826296 melanoma antigen family F, 1 [Homo sapiens] 180 1e-45
gi|52632381 melanoma antigen family D, 1 isoform a [Homo sapiens] 169 2e-42
gi|52632379 melanoma antigen family D, 1 isoform b [Homo sapiens] 169 2e-42
gi|52632377 melanoma antigen family D, 1 isoform b [Homo sapiens] 169 2e-42
gi|29337296 melanoma antigen family D, 4B isoform 2 [Homo sapiens] 161 8e-40
gi|29337294 melanoma antigen family D, 4B isoform 1 [Homo sapiens] 161 8e-40
gi|29337292 melanoma antigen family D, 4B isoform 1 [Homo sapiens] 161 8e-40
gi|149274614 melanoma antigen family D, 4 [Homo sapiens] 161 8e-40
gi|148746206 MAGE-like protein 2 [Homo sapiens] 159 2e-39
gi|4505085 melanoma antigen family B, 4 [Homo sapiens] 154 1e-37
gi|20143482 melanoma antigen family E, 1 [Homo sapiens] 150 2e-36
gi|29171711 melanoma antigen family B, 1 [Homo sapiens] 148 6e-36
gi|29171709 melanoma antigen family B, 1 [Homo sapiens] 148 6e-36
gi|29171707 melanoma antigen family B, 1 [Homo sapiens] 148 6e-36
gi|222418639 melanoma antigen family B, 2 [Homo sapiens] 144 1e-34
gi|239757927 PREDICTED: similar to melanoma antigen family C, 2 ... 143 2e-34
gi|58530863 melanoma antigen family A, 10 [Homo sapiens] 142 4e-34
gi|10567820 melanoma antigen family A, 10 [Homo sapiens] 142 4e-34
gi|27734781 melanoma antigen family B, 18 [Homo sapiens] 141 7e-34
gi|169216977 PREDICTED: melanoma antigen family B, 17 [Homo sapi... 140 2e-33
gi|169216191 PREDICTED: melanoma antigen family B, 17 [Homo sapi... 140 2e-33
gi|169216802 PREDICTED: melanoma antigen family B, 17 [Homo sapi... 140 2e-33
>gi|4505349 necdin [Homo sapiens]
Length = 321
Score = 649 bits (1675), Expect = 0.0
Identities = 321/321 (100%), Positives = 321/321 (100%)
Query: 1 MSEQSKDLSDPNFAAEAPNSEVHSSPGVSEGVPPSATLAEPQSPPLGPTAAPQAAPPPQA 60
MSEQSKDLSDPNFAAEAPNSEVHSSPGVSEGVPPSATLAEPQSPPLGPTAAPQAAPPPQA
Sbjct: 1 MSEQSKDLSDPNFAAEAPNSEVHSSPGVSEGVPPSATLAEPQSPPLGPTAAPQAAPPPQA 60
Query: 61 PNDEGDPKALQQAAEEGRAHQAPSAAQPGPAPPAPAQLVQKAHELMWYVLVKDQKKMIIW 120
PNDEGDPKALQQAAEEGRAHQAPSAAQPGPAPPAPAQLVQKAHELMWYVLVKDQKKMIIW
Sbjct: 61 PNDEGDPKALQQAAEEGRAHQAPSAAQPGPAPPAPAQLVQKAHELMWYVLVKDQKKMIIW 120
Query: 121 FPDMVKDVIGSYKKWCRSILRRTSLILARVFGLHLRLTSLHTMEFALVKALEPEELDRVA 180
FPDMVKDVIGSYKKWCRSILRRTSLILARVFGLHLRLTSLHTMEFALVKALEPEELDRVA
Sbjct: 121 FPDMVKDVIGSYKKWCRSILRRTSLILARVFGLHLRLTSLHTMEFALVKALEPEELDRVA 180
Query: 181 LSNRMPMTGLLLMILSLIYVKGRGARESAVWNVLRILGLRPWKKHSTFGDVRKLITEEFV 240
LSNRMPMTGLLLMILSLIYVKGRGARESAVWNVLRILGLRPWKKHSTFGDVRKLITEEFV
Sbjct: 181 LSNRMPMTGLLLMILSLIYVKGRGARESAVWNVLRILGLRPWKKHSTFGDVRKLITEEFV 240
Query: 241 QMNYLKYQRVPYVEPPEYEFFWGSRASREITKMQIMEFLARVFKKDPQAWPSRYREALEE 300
QMNYLKYQRVPYVEPPEYEFFWGSRASREITKMQIMEFLARVFKKDPQAWPSRYREALEE
Sbjct: 241 QMNYLKYQRVPYVEPPEYEFFWGSRASREITKMQIMEFLARVFKKDPQAWPSRYREALEE 300
Query: 301 ARALREANPTAHYPRSSVSED 321
ARALREANPTAHYPRSSVSED
Sbjct: 301 ARALREANPTAHYPRSSVSED 321
>gi|29171705 melanoma antigen family D, 2 [Homo sapiens]
Length = 606
Score = 191 bits (485), Expect = 7e-49
Identities = 103/243 (42%), Positives = 151/243 (62%), Gaps = 3/243 (1%)
Query: 67 PKALQQAAEEGRAHQAPSAAQPGPAPPAPAQLVQ-KAHELMWYVLVKDQKKMIIWFPDMV 125
PKA + A RA + S+ +P PP L+Q +A++L+ Y+L KDQ K+ I DM+
Sbjct: 248 PKARRGKARR-RAAKLQSSQEPEAPPPRDVALLQGRANDLVKYLLAKDQTKIPIKRSDML 306
Query: 126 KDVIGSYKKWCRSILRRTSLILARVFGLHLRLTSLHTMEFALVKALEPEELDRVALSNRM 185
KD+I Y I+ R L +VFG+ L+ + + L+ LEP + + +
Sbjct: 307 KDIIKEYTDVYPEIIERAGYSLEKVFGIQLKEIDKNDHLYILLSTLEPTDAGILGTTKDS 366
Query: 186 PMTGLLLMILSLIYVKGRGARESAVWNVLRILGLRPWKKHSTFGDVRKLITEEFVQMNYL 245
P GLL+++LS+I++ G + E+ +W VLR LGLRP HS FGDV+KLIT+EFV+ YL
Sbjct: 367 PKLGLLMVLLSIIFMNGNRSSEAVIWEVLRKLGLRPGIHHSLFGDVKKLITDEFVKQKYL 426
Query: 246 KYQRVPYVEPPEYEFFWGSRASREITKMQIMEFLARVFKKDPQAWPSRYREALE-EARAL 304
Y RVP PPEYEFFWG R+ E +KM++++F +V KKDP+ W ++YREA+E + +A
Sbjct: 427 DYARVPNSNPPEYEFFWGLRSYYETSKMKVLKFACKVQKKDPKEWAAQYREAMEADLKAA 486
Query: 305 REA 307
EA
Sbjct: 487 AEA 489
>gi|19387846 melanoma antigen family D, 2 [Homo sapiens]
Length = 606
Score = 191 bits (485), Expect = 7e-49
Identities = 103/243 (42%), Positives = 151/243 (62%), Gaps = 3/243 (1%)
Query: 67 PKALQQAAEEGRAHQAPSAAQPGPAPPAPAQLVQ-KAHELMWYVLVKDQKKMIIWFPDMV 125
PKA + A RA + S+ +P PP L+Q +A++L+ Y+L KDQ K+ I DM+
Sbjct: 248 PKARRGKARR-RAAKLQSSQEPEAPPPRDVALLQGRANDLVKYLLAKDQTKIPIKRSDML 306
Query: 126 KDVIGSYKKWCRSILRRTSLILARVFGLHLRLTSLHTMEFALVKALEPEELDRVALSNRM 185
KD+I Y I+ R L +VFG+ L+ + + L+ LEP + + +
Sbjct: 307 KDIIKEYTDVYPEIIERAGYSLEKVFGIQLKEIDKNDHLYILLSTLEPTDAGILGTTKDS 366
Query: 186 PMTGLLLMILSLIYVKGRGARESAVWNVLRILGLRPWKKHSTFGDVRKLITEEFVQMNYL 245
P GLL+++LS+I++ G + E+ +W VLR LGLRP HS FGDV+KLIT+EFV+ YL
Sbjct: 367 PKLGLLMVLLSIIFMNGNRSSEAVIWEVLRKLGLRPGIHHSLFGDVKKLITDEFVKQKYL 426
Query: 246 KYQRVPYVEPPEYEFFWGSRASREITKMQIMEFLARVFKKDPQAWPSRYREALE-EARAL 304
Y RVP PPEYEFFWG R+ E +KM++++F +V KKDP+ W ++YREA+E + +A
Sbjct: 427 DYARVPNSNPPEYEFFWGLRSYYETSKMKVLKFACKVQKKDPKEWAAQYREAMEADLKAA 486
Query: 305 REA 307
EA
Sbjct: 487 AEA 489
>gi|41350320 melanoma antigen family D, 2 [Homo sapiens]
Length = 606
Score = 191 bits (485), Expect = 7e-49
Identities = 103/243 (42%), Positives = 151/243 (62%), Gaps = 3/243 (1%)
Query: 67 PKALQQAAEEGRAHQAPSAAQPGPAPPAPAQLVQ-KAHELMWYVLVKDQKKMIIWFPDMV 125
PKA + A RA + S+ +P PP L+Q +A++L+ Y+L KDQ K+ I DM+
Sbjct: 248 PKARRGKARR-RAAKLQSSQEPEAPPPRDVALLQGRANDLVKYLLAKDQTKIPIKRSDML 306
Query: 126 KDVIGSYKKWCRSILRRTSLILARVFGLHLRLTSLHTMEFALVKALEPEELDRVALSNRM 185
KD+I Y I+ R L +VFG+ L+ + + L+ LEP + + +
Sbjct: 307 KDIIKEYTDVYPEIIERAGYSLEKVFGIQLKEIDKNDHLYILLSTLEPTDAGILGTTKDS 366
Query: 186 PMTGLLLMILSLIYVKGRGARESAVWNVLRILGLRPWKKHSTFGDVRKLITEEFVQMNYL 245
P GLL+++LS+I++ G + E+ +W VLR LGLRP HS FGDV+KLIT+EFV+ YL
Sbjct: 367 PKLGLLMVLLSIIFMNGNRSSEAVIWEVLRKLGLRPGIHHSLFGDVKKLITDEFVKQKYL 426
Query: 246 KYQRVPYVEPPEYEFFWGSRASREITKMQIMEFLARVFKKDPQAWPSRYREALE-EARAL 304
Y RVP PPEYEFFWG R+ E +KM++++F +V KKDP+ W ++YREA+E + +A
Sbjct: 427 DYARVPNSNPPEYEFFWGLRSYYETSKMKVLKFACKVQKKDPKEWAAQYREAMEADLKAA 486
Query: 305 REA 307
EA
Sbjct: 487 AEA 489
>gi|89276766 trophinin isoform 5 [Homo sapiens]
Length = 1431
Score = 183 bits (464), Expect = 2e-46
Identities = 94/211 (44%), Positives = 139/211 (65%), Gaps = 2/211 (0%)
Query: 90 PAPPAPAQLVQ-KAHELMWYVLVKDQKKMIIWFPDMVKDVIGSYKKWCRSILRRTSLILA 148
PAPP ++Q +A++L+ Y+LVKDQ K+ I DM++DVI Y ++ I+ R S L
Sbjct: 435 PAPPRDVAILQERANKLVKYLLVKDQTKIPIKRSDMLRDVIQEYDEYFPEIIERASYTLE 494
Query: 149 RVFGLHLRLTSLHTMEFALVKALEPEELDRVALSNRMPMTGLLLMILSLIYVKGRGARES 208
++F ++L+ + + L+ E + + P GLL++ILS+I++ G A E+
Sbjct: 495 KMFRVNLKEIDKQSSLYILISTQE-SSAGILGTTKDTPKLGLLMVILSVIFMNGNKASEA 553
Query: 209 AVWNVLRILGLRPWKKHSTFGDVRKLITEEFVQMNYLKYQRVPYVEPPEYEFFWGSRASR 268
+W VLR LGLRP +HS FG+VRKLIT+EFV+ YL+Y+RVP PPEYEFFWG R+
Sbjct: 554 VIWEVLRKLGLRPGVRHSLFGEVRKLITDEFVKQKYLEYKRVPNSRPPEYEFFWGLRSYH 613
Query: 269 EITKMQIMEFLARVFKKDPQAWPSRYREALE 299
E +KM++++F RV KKDP+ W +YREA+E
Sbjct: 614 ETSKMKVLKFACRVQKKDPKDWAVQYREAVE 644
>gi|29540551 trophinin isoform 2 [Homo sapiens]
Length = 706
Score = 183 bits (464), Expect = 2e-46
Identities = 94/211 (44%), Positives = 139/211 (65%), Gaps = 2/211 (0%)
Query: 90 PAPPAPAQLVQ-KAHELMWYVLVKDQKKMIIWFPDMVKDVIGSYKKWCRSILRRTSLILA 148
PAPP ++Q +A++L+ Y+LVKDQ K+ I DM++DVI Y ++ I+ R S L
Sbjct: 435 PAPPRDVAILQERANKLVKYLLVKDQTKIPIKRSDMLRDVIQEYDEYFPEIIERASYTLE 494
Query: 149 RVFGLHLRLTSLHTMEFALVKALEPEELDRVALSNRMPMTGLLLMILSLIYVKGRGARES 208
++F ++L+ + + L+ E + + P GLL++ILS+I++ G A E+
Sbjct: 495 KMFRVNLKEIDKQSSLYILISTQE-SSAGILGTTKDTPKLGLLMVILSVIFMNGNKASEA 553
Query: 209 AVWNVLRILGLRPWKKHSTFGDVRKLITEEFVQMNYLKYQRVPYVEPPEYEFFWGSRASR 268
+W VLR LGLRP +HS FG+VRKLIT+EFV+ YL+Y+RVP PPEYEFFWG R+
Sbjct: 554 VIWEVLRKLGLRPGVRHSLFGEVRKLITDEFVKQKYLEYKRVPNSRPPEYEFFWGLRSYH 613
Query: 269 EITKMQIMEFLARVFKKDPQAWPSRYREALE 299
E +KM++++F RV KKDP+ W +YREA+E
Sbjct: 614 ETSKMKVLKFACRVQKKDPKDWAVQYREAVE 644
>gi|29540541 trophinin isoform 2 [Homo sapiens]
Length = 706
Score = 183 bits (464), Expect = 2e-46
Identities = 94/211 (44%), Positives = 139/211 (65%), Gaps = 2/211 (0%)
Query: 90 PAPPAPAQLVQ-KAHELMWYVLVKDQKKMIIWFPDMVKDVIGSYKKWCRSILRRTSLILA 148
PAPP ++Q +A++L+ Y+LVKDQ K+ I DM++DVI Y ++ I+ R S L
Sbjct: 435 PAPPRDVAILQERANKLVKYLLVKDQTKIPIKRSDMLRDVIQEYDEYFPEIIERASYTLE 494
Query: 149 RVFGLHLRLTSLHTMEFALVKALEPEELDRVALSNRMPMTGLLLMILSLIYVKGRGARES 208
++F ++L+ + + L+ E + + P GLL++ILS+I++ G A E+
Sbjct: 495 KMFRVNLKEIDKQSSLYILISTQE-SSAGILGTTKDTPKLGLLMVILSVIFMNGNKASEA 553
Query: 209 AVWNVLRILGLRPWKKHSTFGDVRKLITEEFVQMNYLKYQRVPYVEPPEYEFFWGSRASR 268
+W VLR LGLRP +HS FG+VRKLIT+EFV+ YL+Y+RVP PPEYEFFWG R+
Sbjct: 554 VIWEVLRKLGLRPGVRHSLFGEVRKLITDEFVKQKYLEYKRVPNSRPPEYEFFWGLRSYH 613
Query: 269 EITKMQIMEFLARVFKKDPQAWPSRYREALE 299
E +KM++++F RV KKDP+ W +YREA+E
Sbjct: 614 ETSKMKVLKFACRVQKKDPKDWAVQYREAVE 644
>gi|20162572 necdin-like 2 [Homo sapiens]
Length = 304
Score = 183 bits (464), Expect = 2e-46
Identities = 101/261 (38%), Positives = 153/261 (58%), Gaps = 5/261 (1%)
Query: 59 QAPNDEGDPKALQQAAEEGRAHQAPSAAQPGPA--PPAPAQLVQKAHELMWYVLVKDQKK 116
+AP+ P Q +G + Q AQ PA P + QL K EL+ ++L+KDQKK
Sbjct: 46 EAPSTSRGPGGSQ--GSQGPSPQGARRAQAAPAVGPRSQKQLELKVSELVQFLLIKDQKK 103
Query: 117 MIIWFPDMVKDVIGSYKKWCRSILRRTSLILARVFGLHLRLTSLHTMEFALVKALEPEEL 176
+ I D++K VIG YK + +R + L VFG L + + L+ LEP E
Sbjct: 104 IPIKRADILKHVIGDYKDIFPDLFKRAAERLQYVFGYKLVELEPKSNTYILINTLEPVEE 163
Query: 177 DRVALSNR-MPMTGLLLMILSLIYVKGRGARESAVWNVLRILGLRPWKKHSTFGDVRKLI 235
D ++ P TGLL+++L LI++KG +E+ W+ LR LG+ P KKH FGD +KLI
Sbjct: 164 DAEMRGDQGTPTTGLLMIVLGLIFMKGNTIKETEAWDFLRRLGVYPTKKHLIFGDPKKLI 223
Query: 236 TEEFVQMNYLKYQRVPYVEPPEYEFFWGSRASREITKMQIMEFLARVFKKDPQAWPSRYR 295
TE+FV+ YL+Y+R+P+ +P +YEF WG R + E +KM++++F+A+V +DP+ WP++Y
Sbjct: 224 TEDFVRQRYLEYRRIPHTDPVDYEFQWGPRTNLETSKMKVLKFVAKVHNQDPKDWPAQYC 283
Query: 296 EALEEARALREANPTAHYPRS 316
EAL + P+ P S
Sbjct: 284 EALADEENRARPQPSGPAPSS 304
>gi|29826296 melanoma antigen family F, 1 [Homo sapiens]
Length = 307
Score = 180 bits (457), Expect = 1e-45
Identities = 118/293 (40%), Positives = 162/293 (55%), Gaps = 17/293 (5%)
Query: 29 SEGVPPSATLAEPQSPPLGPTAAPQAAPPPQAPNDEGDPKALQQAAEEGRAHQAPS---- 84
S G+P E G T AP A+ + P +E L EEG A A +
Sbjct: 7 SRGLPVPQAEGEKDGGHDGETRAPTASQ--ERPKEE-----LGAGREEGAAEPALTRKGA 59
Query: 85 ---AAQPGPAPPAPAQLVQKAHELMWYVLVKDQKKMIIWFPDMVKDVIGSYKKWCRSILR 141
AA+ A +L + EL+ ++LVKD+KK I +MVK VIG K I+
Sbjct: 60 RALAAKALARRRAYRRLNRTVAELVQFLLVKDKKKSPITRSEMVKYVIGDLKILFPDIIA 119
Query: 142 RTSLILARVFGLHLRLTSLHTMEFALVKALEP-EELDRVALSNRMPMTGLLLMILSLIYV 200
R + L VFG L+ + L+ L+P EE + L P GLL+MIL LIY+
Sbjct: 120 RAAEHLRYVFGFELKQFDRKHHTYILINKLKPLEEEEEEDLGGDGPRLGLLMMILGLIYM 179
Query: 201 KGRGARESAVWNVLRILGLRPWKKHSTFGDVRKLITEEFVQMNYLKYQRVPYVEPPEYEF 260
+G ARE+ VW +LR LG++P K H FG ++LI E+FVQ YL Y+RVP+ PPEYEF
Sbjct: 180 RGNSAREAQVWEMLRRLGVQPSKYHFLFGYPKRLIMEDFVQQRYLSYRRVPHTNPPEYEF 239
Query: 261 FWGSRASREITKMQIMEFLARVFKKDPQAWPSRYREAL--EEARALREANPTA 311
WG R++ EI+KM+++ F+A++ KK+PQ WP +YREAL E RA +A A
Sbjct: 240 SWGPRSNLEISKMEVLGFVAKLHKKEPQHWPVQYREALADEADRARAKARAEA 292
>gi|52632381 melanoma antigen family D, 1 isoform a [Homo sapiens]
Length = 834
Score = 169 bits (429), Expect = 2e-42
Identities = 101/272 (37%), Positives = 151/272 (55%), Gaps = 12/272 (4%)
Query: 32 VPPSATLAEPQSPPLGPTAAPQAAP-PPQAPNDEGDPKALQQAAEEGRAHQAPSAAQPGP 90
+PP L P PL P P P PP N P + + RA Q P AAQP
Sbjct: 468 LPPDWPL--PTDWPLPPDWIPADWPIPPDWQNLRPSPNL--RPSPNSRASQNPGAAQPRD 523
Query: 91 APPAPAQLVQKAHELMWYVLVKDQKKMIIWFPDMVKDVIGSYKKWCRSILRRTSLILARV 150
A L ++A++L+ Y+++KD K+ I +M++D+I Y I+ R +L +
Sbjct: 524 V----ALLQERANKLVKYLMLKDYTKVPIKRSEMLRDIIREYTDVYPEIIERACFVLEKK 579
Query: 151 FGLHLRLTSLHTMEFALVKALEPEELDRVALSNR-MPMTGLLLMILSLIYVKGRGARESA 209
FG+ L+ + L+ PE L + + + P GLLL+IL +I++ G A E+
Sbjct: 580 FGIQLKEIDKEEHLYILIST--PESLAGILGTTKDTPKLGLLLVILGVIFMNGNRASEAV 637
Query: 210 VWNVLRILGLRPWKKHSTFGDVRKLITEEFVQMNYLKYQRVPYVEPPEYEFFWGSRASRE 269
+W LR +GLRP +H GD+RKL+T EFV+ YL Y+RVP PPEYEF WG R+ E
Sbjct: 638 LWEALRKMGLRPGVRHPLLGDLRKLLTYEFVKQKYLDYRRVPNSNPPEYEFLWGLRSYHE 697
Query: 270 ITKMQIMEFLARVFKKDPQAWPSRYREALEEA 301
+KM+++ F+A V K+DP+ W +++ EA +EA
Sbjct: 698 TSKMKVLRFIAEVQKRDPRDWTAQFMEAADEA 729
>gi|52632379 melanoma antigen family D, 1 isoform b [Homo sapiens]
Length = 778
Score = 169 bits (429), Expect = 2e-42
Identities = 101/272 (37%), Positives = 151/272 (55%), Gaps = 12/272 (4%)
Query: 32 VPPSATLAEPQSPPLGPTAAPQAAP-PPQAPNDEGDPKALQQAAEEGRAHQAPSAAQPGP 90
+PP L P PL P P P PP N P + + RA Q P AAQP
Sbjct: 412 LPPDWPL--PTDWPLPPDWIPADWPIPPDWQNLRPSPNL--RPSPNSRASQNPGAAQPRD 467
Query: 91 APPAPAQLVQKAHELMWYVLVKDQKKMIIWFPDMVKDVIGSYKKWCRSILRRTSLILARV 150
A L ++A++L+ Y+++KD K+ I +M++D+I Y I+ R +L +
Sbjct: 468 V----ALLQERANKLVKYLMLKDYTKVPIKRSEMLRDIIREYTDVYPEIIERACFVLEKK 523
Query: 151 FGLHLRLTSLHTMEFALVKALEPEELDRVALSNR-MPMTGLLLMILSLIYVKGRGARESA 209
FG+ L+ + L+ PE L + + + P GLLL+IL +I++ G A E+
Sbjct: 524 FGIQLKEIDKEEHLYILIST--PESLAGILGTTKDTPKLGLLLVILGVIFMNGNRASEAV 581
Query: 210 VWNVLRILGLRPWKKHSTFGDVRKLITEEFVQMNYLKYQRVPYVEPPEYEFFWGSRASRE 269
+W LR +GLRP +H GD+RKL+T EFV+ YL Y+RVP PPEYEF WG R+ E
Sbjct: 582 LWEALRKMGLRPGVRHPLLGDLRKLLTYEFVKQKYLDYRRVPNSNPPEYEFLWGLRSYHE 641
Query: 270 ITKMQIMEFLARVFKKDPQAWPSRYREALEEA 301
+KM+++ F+A V K+DP+ W +++ EA +EA
Sbjct: 642 TSKMKVLRFIAEVQKRDPRDWTAQFMEAADEA 673
>gi|52632377 melanoma antigen family D, 1 isoform b [Homo sapiens]
Length = 778
Score = 169 bits (429), Expect = 2e-42
Identities = 101/272 (37%), Positives = 151/272 (55%), Gaps = 12/272 (4%)
Query: 32 VPPSATLAEPQSPPLGPTAAPQAAP-PPQAPNDEGDPKALQQAAEEGRAHQAPSAAQPGP 90
+PP L P PL P P P PP N P + + RA Q P AAQP
Sbjct: 412 LPPDWPL--PTDWPLPPDWIPADWPIPPDWQNLRPSPNL--RPSPNSRASQNPGAAQPRD 467
Query: 91 APPAPAQLVQKAHELMWYVLVKDQKKMIIWFPDMVKDVIGSYKKWCRSILRRTSLILARV 150
A L ++A++L+ Y+++KD K+ I +M++D+I Y I+ R +L +
Sbjct: 468 V----ALLQERANKLVKYLMLKDYTKVPIKRSEMLRDIIREYTDVYPEIIERACFVLEKK 523
Query: 151 FGLHLRLTSLHTMEFALVKALEPEELDRVALSNR-MPMTGLLLMILSLIYVKGRGARESA 209
FG+ L+ + L+ PE L + + + P GLLL+IL +I++ G A E+
Sbjct: 524 FGIQLKEIDKEEHLYILIST--PESLAGILGTTKDTPKLGLLLVILGVIFMNGNRASEAV 581
Query: 210 VWNVLRILGLRPWKKHSTFGDVRKLITEEFVQMNYLKYQRVPYVEPPEYEFFWGSRASRE 269
+W LR +GLRP +H GD+RKL+T EFV+ YL Y+RVP PPEYEF WG R+ E
Sbjct: 582 LWEALRKMGLRPGVRHPLLGDLRKLLTYEFVKQKYLDYRRVPNSNPPEYEFLWGLRSYHE 641
Query: 270 ITKMQIMEFLARVFKKDPQAWPSRYREALEEA 301
+KM+++ F+A V K+DP+ W +++ EA +EA
Sbjct: 642 TSKMKVLRFIAEVQKRDPRDWTAQFMEAADEA 673
>gi|29337296 melanoma antigen family D, 4B isoform 2 [Homo sapiens]
Length = 739
Score = 161 bits (407), Expect = 8e-40
Identities = 101/318 (31%), Positives = 163/318 (51%), Gaps = 32/318 (10%)
Query: 2 SEQSKDLSDPNFAAEAPNSEVHSSPGVSEGVPPSATLAEPQSPPLGPTAAPQAAP-PPQA 60
+++SK L D ++E E +P V PP+ ++P T Q AP PP A
Sbjct: 346 TKKSKHLDDEYESSE----EERETPAV----PPTWRASQPSL-----TVRAQLAPRPPMA 392
Query: 61 PNDEGDPKALQQAAEEGRAHQAPSAAQPGPAPPAPAQLVQKAHELMWYVLVKDQKKMIIW 120
P Q PS P L ++A++L+ Y+++KD KK+ I
Sbjct: 393 PRS-----------------QIPSRHVLCLPPRNVTLLQERANKLVKYLMIKDYKKIPIK 435
Query: 121 FPDMVKDVIGSYKKWCRSILRRTSLILARVFGLHLRLTSLHTMEFALVKALEPEELDRVA 180
DM+KDVI Y + I+ R + L + FG+HL+ + LV +
Sbjct: 436 RADMLKDVIREYDEHFPEIIERATYTLEKKFGIHLKEIDKEEHLYILV-CTRDSSARLLG 494
Query: 181 LSNRMPMTGLLLMILSLIYVKGRGARESAVWNVLRILGLRPWKKHSTFGDVRKLITEEFV 240
+ P LLL+IL +I++ G A E+ +W LR +GLRP +H GD+RKLIT++FV
Sbjct: 495 KTKDTPRLSLLLVILGVIFMNGNRASEAVLWEALRKMGLRPGVRHPFLGDLRKLITDDFV 554
Query: 241 QMNYLKYQRVPYVEPPEYEFFWGSRASREITKMQIMEFLARVFKKDPQAWPSRYREALEE 300
+ YL+Y+++P PPEYEF WG RA E +KM+++ F+A+ +DP+ W + + EA+++
Sbjct: 555 KQKYLEYKKIPNSNPPEYEFLWGLRARHETSKMRVLRFIAQNQNRDPREWKAHFLEAVDD 614
Query: 301 ARALREANPTAHYPRSSV 318
A + + + R+ +
Sbjct: 615 AFKTMDVDMAEEHARAQM 632
Score = 30.0 bits (66), Expect = 2.9
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 11/80 (13%)
Query: 29 SEGVPPSATLAEPQSPPLGPT---AAPQAAPPPQAPNDEGDPKALQQAAEEGRA-----H 80
++G P LA PQ+ + T AAP+ AP A + G P Q+AA EG +
Sbjct: 156 AQGPTPEPPLASPQTSQMLVTSKMAAPE-APATSAQSQTGSP--AQEAATEGPSSACAFS 212
Query: 81 QAPSAAQPGPAPPAPAQLVQ 100
QAP A + P+ A L Q
Sbjct: 213 QAPCAREVDANRPSTAFLGQ 232
>gi|29337294 melanoma antigen family D, 4B isoform 1 [Homo sapiens]
Length = 741
Score = 161 bits (407), Expect = 8e-40
Identities = 101/318 (31%), Positives = 163/318 (51%), Gaps = 32/318 (10%)
Query: 2 SEQSKDLSDPNFAAEAPNSEVHSSPGVSEGVPPSATLAEPQSPPLGPTAAPQAAP-PPQA 60
+++SK L D ++E E +P V PP+ ++P T Q AP PP A
Sbjct: 346 TKKSKHLDDEYESSE----EERETPAV----PPTWRASQPSL-----TVRAQLAPRPPMA 392
Query: 61 PNDEGDPKALQQAAEEGRAHQAPSAAQPGPAPPAPAQLVQKAHELMWYVLVKDQKKMIIW 120
P Q PS P L ++A++L+ Y+++KD KK+ I
Sbjct: 393 PRS-----------------QIPSRHVLCLPPRNVTLLQERANKLVKYLMIKDYKKIPIK 435
Query: 121 FPDMVKDVIGSYKKWCRSILRRTSLILARVFGLHLRLTSLHTMEFALVKALEPEELDRVA 180
DM+KDVI Y + I+ R + L + FG+HL+ + LV +
Sbjct: 436 RADMLKDVIREYDEHFPEIIERATYTLEKKFGIHLKEIDKEEHLYILV-CTRDSSARLLG 494
Query: 181 LSNRMPMTGLLLMILSLIYVKGRGARESAVWNVLRILGLRPWKKHSTFGDVRKLITEEFV 240
+ P LLL+IL +I++ G A E+ +W LR +GLRP +H GD+RKLIT++FV
Sbjct: 495 KTKDTPRLSLLLVILGVIFMNGNRASEAVLWEALRKMGLRPGVRHPFLGDLRKLITDDFV 554
Query: 241 QMNYLKYQRVPYVEPPEYEFFWGSRASREITKMQIMEFLARVFKKDPQAWPSRYREALEE 300
+ YL+Y+++P PPEYEF WG RA E +KM+++ F+A+ +DP+ W + + EA+++
Sbjct: 555 KQKYLEYKKIPNSNPPEYEFLWGLRARHETSKMRVLRFIAQNQNRDPREWKAHFLEAVDD 614
Query: 301 ARALREANPTAHYPRSSV 318
A + + + R+ +
Sbjct: 615 AFKTMDVDMAEEHARAQM 632
Score = 30.0 bits (66), Expect = 2.9
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 11/80 (13%)
Query: 29 SEGVPPSATLAEPQSPPLGPT---AAPQAAPPPQAPNDEGDPKALQQAAEEGRA-----H 80
++G P LA PQ+ + T AAP+ AP A + G P Q+AA EG +
Sbjct: 156 AQGPTPEPPLASPQTSQMLVTSKMAAPE-APATSAQSQTGSP--AQEAATEGPSSACAFS 212
Query: 81 QAPSAAQPGPAPPAPAQLVQ 100
QAP A + P+ A L Q
Sbjct: 213 QAPCAREVDANRPSTAFLGQ 232
>gi|29337292 melanoma antigen family D, 4B isoform 1 [Homo sapiens]
Length = 741
Score = 161 bits (407), Expect = 8e-40
Identities = 101/318 (31%), Positives = 163/318 (51%), Gaps = 32/318 (10%)
Query: 2 SEQSKDLSDPNFAAEAPNSEVHSSPGVSEGVPPSATLAEPQSPPLGPTAAPQAAP-PPQA 60
+++SK L D ++E E +P V PP+ ++P T Q AP PP A
Sbjct: 346 TKKSKHLDDEYESSE----EERETPAV----PPTWRASQPSL-----TVRAQLAPRPPMA 392
Query: 61 PNDEGDPKALQQAAEEGRAHQAPSAAQPGPAPPAPAQLVQKAHELMWYVLVKDQKKMIIW 120
P Q PS P L ++A++L+ Y+++KD KK+ I
Sbjct: 393 PRS-----------------QIPSRHVLCLPPRNVTLLQERANKLVKYLMIKDYKKIPIK 435
Query: 121 FPDMVKDVIGSYKKWCRSILRRTSLILARVFGLHLRLTSLHTMEFALVKALEPEELDRVA 180
DM+KDVI Y + I+ R + L + FG+HL+ + LV +
Sbjct: 436 RADMLKDVIREYDEHFPEIIERATYTLEKKFGIHLKEIDKEEHLYILV-CTRDSSARLLG 494
Query: 181 LSNRMPMTGLLLMILSLIYVKGRGARESAVWNVLRILGLRPWKKHSTFGDVRKLITEEFV 240
+ P LLL+IL +I++ G A E+ +W LR +GLRP +H GD+RKLIT++FV
Sbjct: 495 KTKDTPRLSLLLVILGVIFMNGNRASEAVLWEALRKMGLRPGVRHPFLGDLRKLITDDFV 554
Query: 241 QMNYLKYQRVPYVEPPEYEFFWGSRASREITKMQIMEFLARVFKKDPQAWPSRYREALEE 300
+ YL+Y+++P PPEYEF WG RA E +KM+++ F+A+ +DP+ W + + EA+++
Sbjct: 555 KQKYLEYKKIPNSNPPEYEFLWGLRARHETSKMRVLRFIAQNQNRDPREWKAHFLEAVDD 614
Query: 301 ARALREANPTAHYPRSSV 318
A + + + R+ +
Sbjct: 615 AFKTMDVDMAEEHARAQM 632
Score = 30.0 bits (66), Expect = 2.9
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 11/80 (13%)
Query: 29 SEGVPPSATLAEPQSPPLGPT---AAPQAAPPPQAPNDEGDPKALQQAAEEGRA-----H 80
++G P LA PQ+ + T AAP+ AP A + G P Q+AA EG +
Sbjct: 156 AQGPTPEPPLASPQTSQMLVTSKMAAPE-APATSAQSQTGSP--AQEAATEGPSSACAFS 212
Query: 81 QAPSAAQPGPAPPAPAQLVQ 100
QAP A + P+ A L Q
Sbjct: 213 QAPCAREVDANRPSTAFLGQ 232
>gi|149274614 melanoma antigen family D, 4 [Homo sapiens]
Length = 739
Score = 161 bits (407), Expect = 8e-40
Identities = 101/318 (31%), Positives = 163/318 (51%), Gaps = 32/318 (10%)
Query: 2 SEQSKDLSDPNFAAEAPNSEVHSSPGVSEGVPPSATLAEPQSPPLGPTAAPQAAP-PPQA 60
+++SK L D ++E E +P V PP+ ++P T Q AP PP A
Sbjct: 346 TKKSKHLDDEYESSE----EERETPAV----PPTWRASQPSL-----TVRAQLAPRPPMA 392
Query: 61 PNDEGDPKALQQAAEEGRAHQAPSAAQPGPAPPAPAQLVQKAHELMWYVLVKDQKKMIIW 120
P Q PS P L ++A++L+ Y+++KD KK+ I
Sbjct: 393 PRS-----------------QIPSRHVLCLPPRNVTLLQERANKLVKYLMIKDYKKIPIK 435
Query: 121 FPDMVKDVIGSYKKWCRSILRRTSLILARVFGLHLRLTSLHTMEFALVKALEPEELDRVA 180
DM+KDVI Y + I+ R + L + FG+HL+ + LV +
Sbjct: 436 RADMLKDVIREYDEHFPEIIERATYTLEKKFGIHLKEIDKEEHLYILV-CTRDSSARLLG 494
Query: 181 LSNRMPMTGLLLMILSLIYVKGRGARESAVWNVLRILGLRPWKKHSTFGDVRKLITEEFV 240
+ P LLL+IL +I++ G A E+ +W LR +GLRP +H GD+RKLIT++FV
Sbjct: 495 KTKDTPRLSLLLVILGVIFMNGNRASEAVLWEALRKMGLRPGVRHPFLGDLRKLITDDFV 554
Query: 241 QMNYLKYQRVPYVEPPEYEFFWGSRASREITKMQIMEFLARVFKKDPQAWPSRYREALEE 300
+ YL+Y+++P PPEYEF WG RA E +KM+++ F+A+ +DP+ W + + EA+++
Sbjct: 555 KQKYLEYKKIPNSNPPEYEFLWGLRARHETSKMRVLRFIAQNQNRDPREWKAHFLEAVDD 614
Query: 301 ARALREANPTAHYPRSSV 318
A + + + R+ +
Sbjct: 615 AFKTMDVDMAEEHARAQM 632
Score = 30.0 bits (66), Expect = 2.9
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 11/80 (13%)
Query: 29 SEGVPPSATLAEPQSPPLGPT---AAPQAAPPPQAPNDEGDPKALQQAAEEGRA-----H 80
++G P LA PQ+ + T AAP+ AP A + G P Q+AA EG +
Sbjct: 156 AQGPTPEPPLASPQTSQMLVTSKMAAPE-APATSAQSQTGSP--AQEAATEGPSSACAFS 212
Query: 81 QAPSAAQPGPAPPAPAQLVQ 100
QAP A + P+ A L Q
Sbjct: 213 QAPCAREVDANRPSTAFLGQ 232
>gi|148746206 MAGE-like protein 2 [Homo sapiens]
Length = 646
Score = 159 bits (403), Expect = 2e-39
Identities = 89/222 (40%), Positives = 129/222 (58%), Gaps = 4/222 (1%)
Query: 79 AHQAPSAAQPGPAPPAPAQLVQKAHELMWYVLVKDQKKMIIWFPDMVKDVIGSYKKWCRS 138
A Q S + P P L ++A+ L+ ++LVKDQ K+ + +MVK ++ YK C
Sbjct: 402 ATQDNSKVEAQPLSP----LDERANALVQFLLVKDQAKVPVQRSEMVKVILREYKDECLD 457
Query: 139 ILRRTSLILARVFGLHLRLTSLHTMEFALVKALEPEELDRVALSNRMPMTGLLLMILSLI 198
I+ R + L FG L+ + ++ L + VA P GLL+++LSLI
Sbjct: 458 IINRANNKLECAFGYQLKEIDTKNHAYIIINKLGYHTGNLVASYLDRPKFGLLMVVLSLI 517
Query: 199 YVKGRGARESAVWNVLRILGLRPWKKHSTFGDVRKLITEEFVQMNYLKYQRVPYVEPPEY 258
++KG RE ++N L LGL + + FG+ +KLITE FV+ YL+Y+R+PY EP EY
Sbjct: 518 FMKGNCVREDLIFNFLFKLGLDVRETNGLFGNTKKLITEVFVRQKYLEYRRIPYTEPAEY 577
Query: 259 EFFWGSRASREITKMQIMEFLARVFKKDPQAWPSRYREALEE 300
EF WG RA E +KM ++ FLA++ KKDPQ+WP Y EAL E
Sbjct: 578 EFLWGPRAFLETSKMLVLRFLAKLHKKDPQSWPFHYLEALAE 619
Score = 28.9 bits (63), Expect = 6.4
Identities = 26/80 (32%), Positives = 32/80 (40%), Gaps = 17/80 (21%)
Query: 30 EGVPPSATLAEPQSPPLGPTAA-PQAAPP--PQAPNDEGDPKALQQAAEEGRAHQAPSAA 86
+G PPS + Q PP A+ PQA P P P+ + P LQ A
Sbjct: 47 QGAPPSQKAVQIQLPPQQAQASGPQAEVPTLPLQPSWQAPPAVLQ--------------A 92
Query: 87 QPGPAPPAPAQLVQKAHELM 106
QPGP A + A LM
Sbjct: 93 QPGPPVAAANFPLGSAKSLM 112
Score = 28.5 bits (62), Expect = 8.4
Identities = 26/94 (27%), Positives = 36/94 (38%), Gaps = 10/94 (10%)
Query: 8 LSDPNFAAEA-------PNSEVHSSPGVSEGVPP--SATLAEPQSPPLGPTAAPQAAPPP 58
L DP EA P +++S S+ VP AT A PQ+ A+ + PP
Sbjct: 218 LQDPFACVEALPAVPWVPQPNMNASKA-SQAVPTFLMATAAAPQATATTQEASKTSVEPP 276
Query: 59 QAPNDEGDPKALQQAAEEGRAHQAPSAAQPGPAP 92
+ K +A E+ R H GP P
Sbjct: 277 RRSGKATRKKKHLEAQEDSRGHTLAFHDWQGPRP 310
>gi|4505085 melanoma antigen family B, 4 [Homo sapiens]
Length = 346
Score = 154 bits (388), Expect = 1e-37
Identities = 99/296 (33%), Positives = 148/296 (50%), Gaps = 8/296 (2%)
Query: 14 AAEAPNSEVHSSPGVSEGVPPSATLAEPQSPPLGPTAAPQAAPPPQAPNDEGDPKALQQA 73
AAE S SS + + S PQ P P AA +D+GD Q
Sbjct: 32 AAEKEESPSSSSSVLRDTASSSLAFGIPQEPQREPPTTSAAAAMSCTGSDKGDES---QD 88
Query: 74 AEEGRAHQAPSAAQPGPAPPAPAQLVQKAHELMWYVLVKDQKKMIIWFPDMVKDVIGSYK 133
E + QA ++ + L +K L+ ++L K + K +M+K + YK
Sbjct: 89 EENASSSQASTSTERS----LKDSLTRKTKMLVQFLLYKYKMKEPTTKAEMLKIISKKYK 144
Query: 134 KWCRSILRRTSLILARVFGLHLRLTSLHTMEFALVKALEPEELDRVALSNRMPMTGLLLM 193
+ I R+ S VFGL L+ + T + LV L P + ++ + +P GLL+
Sbjct: 145 EHFPEIFRKVSQRTELVFGLALKEVNPTTHSYILVSMLGPNDGNQSSAWT-LPRNGLLMP 203
Query: 194 ILSLIYVKGRGARESAVWNVLRILGLRPWKKHSTFGDVRKLITEEFVQMNYLKYQRVPYV 253
+LS+I++ G ARE +W L +LG+ K+H FG+ RKLIT++ VQ YL+YQ+VP
Sbjct: 204 LLSVIFLNGNCAREEEIWEFLNMLGIYDGKRHLIFGEPRKLITQDLVQEKYLEYQQVPNS 263
Query: 254 EPPEYEFFWGSRASREITKMQIMEFLARVFKKDPQAWPSRYREALEEARALREANP 309
+PP Y+F WG RA E +KM+++EFLA+V P +P Y EAL + A P
Sbjct: 264 DPPRYQFLWGPRAHAETSKMKVLEFLAKVNDTTPNNFPLLYEEALRDEEERAGARP 319
>gi|20143482 melanoma antigen family E, 1 [Homo sapiens]
Length = 957
Score = 150 bits (378), Expect = 2e-36
Identities = 102/314 (32%), Positives = 154/314 (49%), Gaps = 29/314 (9%)
Query: 14 AAEAPNSEVHSSPGVSEGVPPSATLAEPQSPPLGPTAAPQAAPPPQAPNDEGDPKALQQA 73
A + P S V +PG EG PS + S P+ P P+ D +
Sbjct: 396 APDGPGSSVLPNPG--EG--PSTLFSSSASVDRNPSKCSLVLPSPRVTKASVDSDSEGPK 451
Query: 74 AEEG-------RAHQAPS------------AAQPGPAPPAPAQLVQKAHELMWYVLVKDQ 114
EG R ++P+ A P P + Q EL+ ++LVKDQ
Sbjct: 452 GAEGPIEFEVLRDCESPNSISIMGLNTSRVAITLKPQDP----MEQNVAELLQFLLVKDQ 507
Query: 115 KKMIIWFPDMVKDVIGSYKKWCRSILRRTSLILARVFGLHLRLTSLHTMEFALVKALEPE 174
K I +M + ++ Y+ ILRR + L +F LR + L+ L P
Sbjct: 508 SKYPIRESEMREYIVKEYRNQFPEILRRAAAHLECIFRFELRELDPEAHTYILLNKLGPV 567
Query: 175 ELDRVALSNRMPMTGLLLMILSLIYVKGRGARESAVWNVLRILGLRPWKKHSTFGDVRKL 234
+ + S P GLL+MIL I++ G A+E+ +W +L +G++ ++ S FG+ ++L
Sbjct: 568 PFEGLEESPNGPKMGLLMMILGQIFLNGNQAKEAEIWEMLWRMGVQRERRLSIFGNPKRL 627
Query: 235 ITEEFVQMNYLKYQRVPYVEPPEYEFFWGSRASREITKMQIMEFLARVFKKDPQAWPSRY 294
++ EFV YL Y+ V +P EYEFFWG R+ E TKM+I++F+A+++ KDP WP +Y
Sbjct: 628 LSVEFVWQRYLDYRPVTDCKPVEYEFFWGPRSHLETTKMKILKFMAKIYNKDPMDWPEKY 687
Query: 295 REALEE--ARALRE 306
EALEE ARA E
Sbjct: 688 NEALEEDAARAFAE 701
Score = 120 bits (300), Expect = 2e-27
Identities = 68/205 (33%), Positives = 108/205 (52%), Gaps = 8/205 (3%)
Query: 96 AQLVQKAHELMWYVLVKDQKKMIIWFPDMVKDVIGSYKKWCRSILRRTSLILARVFGLHL 155
++L KA +L+ L+ D K+ I ++ + K +L R + L V+G L
Sbjct: 743 SRLESKARKLVQLFLLMDSTKLPIPKKGILYYIGRECSKVFPDLLNRAARTLNHVYGTEL 802
Query: 156 RLTSLHTMEFALVKALEPEELDRVALSNRMPMTGLLLMILSLIYVKGRGARESAVWNVLR 215
+ + L E EE + + S P L+ +LS I++ G ARESAVW LR
Sbjct: 803 VVLDPRNHSYTLYNRREMEETEEIVDSPNRPGNNFLMQVLSFIFIMGNHARESAVWAFLR 862
Query: 216 ILGLRPWKKHSTFGDVRKLITEEFVQMNYLKYQRVPYVEPPEYEFFWGSRASREITKMQI 275
LG++ +KH +IT ++ Y+ RVP +P +YEF WG RA E +KM+
Sbjct: 863 GLGVQAGRKH--------VITCRYLSQRYIDSLRVPDSDPVQYEFVWGPRARLETSKMKA 914
Query: 276 MEFLARVFKKDPQAWPSRYREALEE 300
+ ++AR+ +K+PQ WP +YREA+E+
Sbjct: 915 LRYVARIHRKEPQDWPQQYREAMED 939
Score = 34.3 bits (77), Expect = 0.15
Identities = 28/90 (31%), Positives = 37/90 (41%), Gaps = 4/90 (4%)
Query: 9 SDPNFAAEAPNSEVHSSP--GVSEGVPPSATLAEPQSPPLGPTAAPQAAPPPQAPNDEGD 66
S P A E P++ V +P G S V P+ S PL T + QA DEG
Sbjct: 175 SVPPTAYEGPSTSVVPTPDEGPSTSVLPTPGEGPGTSVPLAATEG--LSTSVQATPDEGP 232
Query: 67 PKALQQAAEEGRAHQAPSAAQPGPAPPAPA 96
++ A EG + P GP+ PA
Sbjct: 233 STSVPPTATEGLSTPVPPTRDEGPSTSVPA 262
Score = 28.5 bits (62), Expect = 8.4
Identities = 25/90 (27%), Positives = 36/90 (40%), Gaps = 16/90 (17%)
Query: 2 SEQSKDLSDPNFAAEAPNSEVHSSPG--VSEGVPPSATLAEPQSPPLGPTAAPQAAPPPQ 59
S + S P A+E P++ + +PG S VPP+A GP+ + P
Sbjct: 144 SSEEPSTSVPPTASEVPSTSLPPTPGEGTSTSVPPTAYE--------GPSTSVVPTP--- 192
Query: 60 APNDEGDPKALQQAAEEGRAHQAPSAAQPG 89
DEG ++ EG P AA G
Sbjct: 193 ---DEGPSTSVLPTPGEGPGTSVPLAATEG 219
Score = 28.5 bits (62), Expect = 8.4
Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Query: 9 SDPNFAAEAPNSEVHSSPG--VSEGVPPSATLAEPQSPPLGPTAAPQAAPPPQAPNDEG 65
S P E P++ V PG +S VPP+A+ S P P P AP+ G
Sbjct: 343 SVPPTPGEGPSTSVLPIPGEGLSTSVPPTASDGSDTSVPPTPGEGASTLVQPTAPDGPG 401
>gi|29171711 melanoma antigen family B, 1 [Homo sapiens]
Length = 347
Score = 148 bits (374), Expect = 6e-36
Identities = 102/293 (34%), Positives = 144/293 (49%), Gaps = 10/293 (3%)
Query: 14 AAEAPNSEVHSSPGVSEGVPPSATLAE-PQSPPLGPTAAPQAAPPPQAPNDEGDPKALQQ 72
A A E SS V P S+ A PQ P P AA +DEG A Q
Sbjct: 30 ATAAEKEECPSSSPVLGDTPTSSPAAGIPQKPQGAPPTTTAAAAVSCTESDEG---AKCQ 86
Query: 73 AAEEGRAHQAPSAAQPGPAPPAPAQLVQKAHELMWYVLVKDQKKMIIWFPDMVKDVIGSY 132
E QA ++ + P + +A LM ++L K + + I DM+K V Y
Sbjct: 87 GEENASFSQATTSTESSVKDP----VAWEAGMLMHFILRKYKMREPIMKADMLKVVDEKY 142
Query: 133 KKWCRSILRRTSLILARVFGLHLRLTSLHTMEFALVKALEPEELDRVALSNRMPMTGLLL 192
K IL S L VFGL L+ + + LV L ++ P GLL+
Sbjct: 143 KDHFTEILNGASRRLELVFGLDLKEDNPSGHTYTLVSKLNLTNDGNLSNDWDFPRNGLLM 202
Query: 193 MILSLIYVKGRGARESAVWNVLRILGLRPWKKHSTFGDVRKLITEEFVQMNYLKYQRVPY 252
+L +I++KG A E +W + +LG ++H +G+ RK IT++ VQ YLKY++VP
Sbjct: 203 PLLGVIFLKGNSATEEEIWKFMNVLGAYDGEEHLIYGEPRKFITQDLVQEKYLKYEQVPN 262
Query: 253 VEPPEYEFFWGSRASREITKMQIMEFLARVFKKDPQAWPSRYREAL--EEARA 303
+PP Y+F WG RA E TKM+++EFLA++ P+ +PS Y EAL EE RA
Sbjct: 263 SDPPRYQFLWGPRAYAETTKMKVLEFLAKMNGATPRDFPSHYEEALRDEEERA 315
>gi|29171709 melanoma antigen family B, 1 [Homo sapiens]
Length = 347
Score = 148 bits (374), Expect = 6e-36
Identities = 102/293 (34%), Positives = 144/293 (49%), Gaps = 10/293 (3%)
Query: 14 AAEAPNSEVHSSPGVSEGVPPSATLAE-PQSPPLGPTAAPQAAPPPQAPNDEGDPKALQQ 72
A A E SS V P S+ A PQ P P AA +DEG A Q
Sbjct: 30 ATAAEKEECPSSSPVLGDTPTSSPAAGIPQKPQGAPPTTTAAAAVSCTESDEG---AKCQ 86
Query: 73 AAEEGRAHQAPSAAQPGPAPPAPAQLVQKAHELMWYVLVKDQKKMIIWFPDMVKDVIGSY 132
E QA ++ + P + +A LM ++L K + + I DM+K V Y
Sbjct: 87 GEENASFSQATTSTESSVKDP----VAWEAGMLMHFILRKYKMREPIMKADMLKVVDEKY 142
Query: 133 KKWCRSILRRTSLILARVFGLHLRLTSLHTMEFALVKALEPEELDRVALSNRMPMTGLLL 192
K IL S L VFGL L+ + + LV L ++ P GLL+
Sbjct: 143 KDHFTEILNGASRRLELVFGLDLKEDNPSGHTYTLVSKLNLTNDGNLSNDWDFPRNGLLM 202
Query: 193 MILSLIYVKGRGARESAVWNVLRILGLRPWKKHSTFGDVRKLITEEFVQMNYLKYQRVPY 252
+L +I++KG A E +W + +LG ++H +G+ RK IT++ VQ YLKY++VP
Sbjct: 203 PLLGVIFLKGNSATEEEIWKFMNVLGAYDGEEHLIYGEPRKFITQDLVQEKYLKYEQVPN 262
Query: 253 VEPPEYEFFWGSRASREITKMQIMEFLARVFKKDPQAWPSRYREAL--EEARA 303
+PP Y+F WG RA E TKM+++EFLA++ P+ +PS Y EAL EE RA
Sbjct: 263 SDPPRYQFLWGPRAYAETTKMKVLEFLAKMNGATPRDFPSHYEEALRDEEERA 315
>gi|29171707 melanoma antigen family B, 1 [Homo sapiens]
Length = 347
Score = 148 bits (374), Expect = 6e-36
Identities = 102/293 (34%), Positives = 144/293 (49%), Gaps = 10/293 (3%)
Query: 14 AAEAPNSEVHSSPGVSEGVPPSATLAE-PQSPPLGPTAAPQAAPPPQAPNDEGDPKALQQ 72
A A E SS V P S+ A PQ P P AA +DEG A Q
Sbjct: 30 ATAAEKEECPSSSPVLGDTPTSSPAAGIPQKPQGAPPTTTAAAAVSCTESDEG---AKCQ 86
Query: 73 AAEEGRAHQAPSAAQPGPAPPAPAQLVQKAHELMWYVLVKDQKKMIIWFPDMVKDVIGSY 132
E QA ++ + P + +A LM ++L K + + I DM+K V Y
Sbjct: 87 GEENASFSQATTSTESSVKDP----VAWEAGMLMHFILRKYKMREPIMKADMLKVVDEKY 142
Query: 133 KKWCRSILRRTSLILARVFGLHLRLTSLHTMEFALVKALEPEELDRVALSNRMPMTGLLL 192
K IL S L VFGL L+ + + LV L ++ P GLL+
Sbjct: 143 KDHFTEILNGASRRLELVFGLDLKEDNPSGHTYTLVSKLNLTNDGNLSNDWDFPRNGLLM 202
Query: 193 MILSLIYVKGRGARESAVWNVLRILGLRPWKKHSTFGDVRKLITEEFVQMNYLKYQRVPY 252
+L +I++KG A E +W + +LG ++H +G+ RK IT++ VQ YLKY++VP
Sbjct: 203 PLLGVIFLKGNSATEEEIWKFMNVLGAYDGEEHLIYGEPRKFITQDLVQEKYLKYEQVPN 262
Query: 253 VEPPEYEFFWGSRASREITKMQIMEFLARVFKKDPQAWPSRYREAL--EEARA 303
+PP Y+F WG RA E TKM+++EFLA++ P+ +PS Y EAL EE RA
Sbjct: 263 SDPPRYQFLWGPRAYAETTKMKVLEFLAKMNGATPRDFPSHYEEALRDEEERA 315
>gi|222418639 melanoma antigen family B, 2 [Homo sapiens]
Length = 319
Score = 144 bits (363), Expect = 1e-34
Identities = 90/299 (30%), Positives = 154/299 (51%), Gaps = 6/299 (2%)
Query: 3 EQSKDLSDPNFAAEAPNSEVHSSPGVSEGVPPSATLAE-PQSPPLGPTAAPQAAPPPQAP 61
++++ L+ P S VS G S+ A PQ P PT A AA +
Sbjct: 20 DETRGLNVPQVTEAEEEEAPCCSSSVSGGAASSSPAAGIPQEPQRAPTTAAAAAAGVSST 79
Query: 62 NDEGDPKALQQAAEEGRAHQAPSAAQPGPAPPAPAQLVQKAHELMWYVLVKDQKKMIIWF 121
+ K+ Q G + + S A P+ L +K+ L+ ++L K + K +
Sbjct: 80 KSKKGAKSHQ-----GEKNASSSQASTSTKSPSEDPLTRKSGSLVQFLLYKYKIKKSVTK 134
Query: 122 PDMVKDVIGSYKKWCRSILRRTSLILARVFGLHLRLTSLHTMEFALVKALEPEELDRVAL 181
+M+K V +++ IL++ S L+ VFGL L + + + + ++ + + +
Sbjct: 135 GEMLKIVGKRFREHFPEILKKASEGLSVVFGLELNKVNPNGHTYTFIDKVDLTDEESLLS 194
Query: 182 SNRMPMTGLLLMILSLIYVKGRGARESAVWNVLRILGLRPWKKHSTFGDVRKLITEEFVQ 241
S P LL+ +L +I++ G A E +W L +LG+ ++HS FG+ KLIT++ VQ
Sbjct: 195 SWDFPRRKLLMPLLGVIFLNGNSATEEEIWEFLNMLGVYDGEEHSVFGEPWKLITKDLVQ 254
Query: 242 MNYLKYQRVPYVEPPEYEFFWGSRASREITKMQIMEFLARVFKKDPQAWPSRYREALEE 300
YL+Y++VP +PP ++F WG RA E +KM+++EFLA+V P A+P+ Y EAL++
Sbjct: 255 EKYLEYKQVPSSDPPRFQFLWGPRAYAETSKMKVLEFLAKVNGTTPCAFPTHYEEALKD 313
>gi|239757927 PREDICTED: similar to melanoma antigen family C, 2
[Homo sapiens]
Length = 464
Score = 143 bits (360), Expect = 2e-34
Identities = 90/286 (31%), Positives = 145/286 (50%), Gaps = 6/286 (2%)
Query: 28 VSEGVPPSATLAEPQSPPLGPTAAPQAAPPPQAPNDEGDPKALQQAAEEGRAHQAPSAAQ 87
V GV P+ T + P SPP GP P +P + ++++ +
Sbjct: 71 VPSGVIPNLTESIPSSPPQGPPQGPSQSPLSSCCSSFSWSSFSEESSSQKGEDTGTCQGL 130
Query: 88 PGPAPPAPAQLVQKAHELMWYVLVKDQKKMIIWFPDMVKDVIGSYKKWCRSILRRTSLIL 147
P L +K EL+ ++L+K + + + +M+ VI YK + IL+R +
Sbjct: 131 PDSESSFTYTLDEKVAELVEFLLLKYEAEEPVTEAEMLMIVI-KYKDYFPVILKRAREFM 189
Query: 148 ARVFGLHL-RLTSLHTMEFALVKALEPEELDRVALSNRMPMTGLLLMILSLIYVKGRGAR 206
+FGL L + H FA L E D MP LL++ILS+I++KG A
Sbjct: 190 ELLFGLALIEVGPDHFCVFANTVGLTDEGSD----DEGMPENSLLIIILSVIFIKGNCAS 245
Query: 207 ESAVWNVLRILGLRPWKKHSTFGDVRKLITEEFVQMNYLKYQRVPYVEPPEYEFFWGSRA 266
E +W VL +G+ ++H +G+ R+L+T+ +VQ +YL+Y+ VP+ PP YEF WG RA
Sbjct: 246 EEVIWEVLNAVGVYAGREHFVYGEPRELLTKVWVQGHYLEYREVPHSSPPYYEFLWGPRA 305
Query: 267 SREITKMQIMEFLARVFKKDPQAWPSRYREALEEARALREANPTAH 312
E K +++EFLA++ P ++PS Y++AL++ A AH
Sbjct: 306 HSESIKKKVLEFLAKLNNTVPSSFPSWYKDALKDVEERARARVRAH 351
>gi|58530863 melanoma antigen family A, 10 [Homo sapiens]
Length = 369
Score = 142 bits (358), Expect = 4e-34
Identities = 95/314 (30%), Positives = 160/314 (50%), Gaps = 24/314 (7%)
Query: 11 PNFAAEAPNSEVHSSPGVSEGVPPSATLAEPQSPPLGPTAAPQAAPPPQAPNDEGDPKAL 70
P E +S +S P S++ + PL P+ + + + PN P++
Sbjct: 31 PLAVEEDASSSTSTSSSFPSSFPSSSSSSSSSCYPLIPSTPEEVSADDETPNP---PQSA 87
Query: 71 QQA--------------AEEGRAHQ---APSAAQ--PGPAPPAPAQLVQKAHELMWYVLV 111
Q A ++EG + Q +PS Q P +++ +K +L+ ++L
Sbjct: 88 QIACSSPSVVASLPLDQSDEGSSSQKEESPSTLQVLPDSESLPRSEIDEKVTDLVQFLLF 147
Query: 112 KDQKKMIIWFPDMVKDVIGSYKKWCRSILRRTSLILARVFGLHLRLTSLHTMEFALVKAL 171
K Q K I ++++ VI +Y+ + S + VFG+ ++ F LV +L
Sbjct: 148 KYQMKEPITKAEILESVIKNYEDHFPLLFSEASECMLLVFGIDVKEVDPTGHSFVLVTSL 207
Query: 172 EPEELDRVALSNRMPMTGLLLMILSLIYVKGRGARESAVWNVLRILGLRPWKKHSTFGDV 231
++ MP TG+L++ILS+I+++G E +W L ++GL +H +G+
Sbjct: 208 GLTYDGMLSDVQSMPKTGILILILSIIFIEGYCTPEEVIWEALNMMGLYDGMEHLIYGEP 267
Query: 232 RKLITEEFVQMNYLKYQRVPYVEPPEYEFFWGSRASREITKMQIMEFLARVFKKDPQAWP 291
RKL+T+++VQ NYL+Y++VP +P YEF WG RA EI KM +++FLA+V DP+++P
Sbjct: 268 RKLLTQDWVQENYLEYRQVPGSDPARYEFLWGPRAHAEIRKMSLLKFLAKVNGSDPRSFP 327
Query: 292 SRYREAL--EEARA 303
Y EAL EE RA
Sbjct: 328 LWYEEALKDEEERA 341
>gi|10567820 melanoma antigen family A, 10 [Homo sapiens]
Length = 369
Score = 142 bits (358), Expect = 4e-34
Identities = 95/314 (30%), Positives = 160/314 (50%), Gaps = 24/314 (7%)
Query: 11 PNFAAEAPNSEVHSSPGVSEGVPPSATLAEPQSPPLGPTAAPQAAPPPQAPNDEGDPKAL 70
P E +S +S P S++ + PL P+ + + + PN P++
Sbjct: 31 PLAVEEDASSSTSTSSSFPSSFPSSSSSSSSSCYPLIPSTPEEVSADDETPNP---PQSA 87
Query: 71 QQA--------------AEEGRAHQ---APSAAQ--PGPAPPAPAQLVQKAHELMWYVLV 111
Q A ++EG + Q +PS Q P +++ +K +L+ ++L
Sbjct: 88 QIACSSPSVVASLPLDQSDEGSSSQKEESPSTLQVLPDSESLPRSEIDEKVTDLVQFLLF 147
Query: 112 KDQKKMIIWFPDMVKDVIGSYKKWCRSILRRTSLILARVFGLHLRLTSLHTMEFALVKAL 171
K Q K I ++++ VI +Y+ + S + VFG+ ++ F LV +L
Sbjct: 148 KYQMKEPITKAEILESVIKNYEDHFPLLFSEASECMLLVFGIDVKEVDPTGHSFVLVTSL 207
Query: 172 EPEELDRVALSNRMPMTGLLLMILSLIYVKGRGARESAVWNVLRILGLRPWKKHSTFGDV 231
++ MP TG+L++ILS+I+++G E +W L ++GL +H +G+
Sbjct: 208 GLTYDGMLSDVQSMPKTGILILILSIIFIEGYCTPEEVIWEALNMMGLYDGMEHLIYGEP 267
Query: 232 RKLITEEFVQMNYLKYQRVPYVEPPEYEFFWGSRASREITKMQIMEFLARVFKKDPQAWP 291
RKL+T+++VQ NYL+Y++VP +P YEF WG RA EI KM +++FLA+V DP+++P
Sbjct: 268 RKLLTQDWVQENYLEYRQVPGSDPARYEFLWGPRAHAEIRKMSLLKFLAKVNGSDPRSFP 327
Query: 292 SRYREAL--EEARA 303
Y EAL EE RA
Sbjct: 328 LWYEEALKDEEERA 341
>gi|27734781 melanoma antigen family B, 18 [Homo sapiens]
Length = 343
Score = 141 bits (356), Expect = 7e-34
Identities = 94/302 (31%), Positives = 152/302 (50%), Gaps = 19/302 (6%)
Query: 16 EAPNSEVHSSPGVSEGVPPSATLAEPQSPPLGPTAAPQAAPPPQAPNDEG---DPKALQQ 72
E+P+S + +P + T + P++ P+ AP + N+ D K+L
Sbjct: 36 ESPSSAYLLFGDRPQNLPAAETPSIPEALQGAPSTTNAIAPVSCSSNEGASSQDEKSLGS 95
Query: 73 AAEEGRAHQAPSAAQPGPAPPAPAQLVQKAHELMWYVLVKDQKKMIIWFPDMVKDVIGSY 132
+ E + P L +K L+ ++L K + K I DM+K VI
Sbjct: 96 SREAEGWKEDP--------------LNKKVVSLVHFLLQKYETKEPITKGDMIKFVIRKD 141
Query: 133 KKWCRSILRRTSLILARVFGLHLRLTSLHTMEFALVKALEPEELDRVALSNRMPMTGLLL 192
K IL+R S + G+ L+ +A L+ + + ++P TGLL+
Sbjct: 142 KCHFNEILKRASEHMELALGVDLKEVDPIRHYYAFFSKLDLTYDETTSDEEKIPKTGLLM 201
Query: 193 MILSLIYVKGRGARESAVWNVLRILGLRPWKKHSTFGDVRKLITEEFVQMNYLKYQRVPY 252
+ L +I++ G A E AVW ++ ++G+ +KH +GD RK++T++ VQ+ YL+YQ+VP
Sbjct: 202 IALGVIFLNGNRAPEEAVWEIMNMMGVYADRKHFLYGDPRKVMTKDLVQLKYLEYQQVPN 261
Query: 253 VEPPEYEFFWGSRASREITKMQIMEFLARVFKKDPQAWPSRYREAL--EEARALREANPT 310
+PP YEF WG RA E +KM+++EF+A++ P A+PS Y EAL EE R A
Sbjct: 262 SDPPRYEFLWGPRAHAETSKMKVLEFVAKIHDTVPSAFPSCYEEALRDEEQRTQARAAAR 321
Query: 311 AH 312
AH
Sbjct: 322 AH 323
>gi|169216977 PREDICTED: melanoma antigen family B, 17 [Homo
sapiens]
Length = 457
Score = 140 bits (352), Expect = 2e-33
Identities = 96/299 (32%), Positives = 156/299 (52%), Gaps = 25/299 (8%)
Query: 36 ATLAEPQSPPLGPTAAPQAAPPPQAPNDEGDPKALQQAAEEGRAHQAPSAA--------Q 87
AT AE + P +++P PPQ+ + G P+ Q+A+ A S Q
Sbjct: 151 ATAAEKEKLP--SSSSPACQSPPQSFPNAGIPQESQRASYPSSPASAVSLTSSDEGAKGQ 208
Query: 88 PGPAP-----PAPAQ------LVQKAHELMWYVLVKDQKKMIIWFPDMVKDVIGSYKKWC 136
G +P P+ ++ L K EL+ ++L K +K I M+K + YK+
Sbjct: 209 KGESPNSFHGPSSSESTGRDLLNTKTGELVQFLLNKYIRKEPITREAMLKVINRKYKQHF 268
Query: 137 RSILRRTSLILARVFGLHLRLTSLHTMEFALVKALEPEELDRVALSNRMPMTGLLLMILS 196
ILRR++ + VFGL+L+ + LV L+ ++ P++GLL+++LS
Sbjct: 269 PEILRRSTENVEVVFGLYLKEMDPSRQSYVLVGKLDFPNQGSLSDGGGFPLSGLLMVLLS 328
Query: 197 LIYVKGRGARESAVWNVLRILGLRPWKKHSTFGDVRKLITEEFVQMNYLKYQRVPYVEPP 256
I++ G A E +W L LG+ +KH +G+ ++L+T++ V+ YL+YQ+VP +PP
Sbjct: 329 TIFMHGNRATEEEMWECLNALGMYKGRKHFIYGEPQELVTKDLVREGYLEYQQVPSSDPP 388
Query: 257 EYEFFWGSRASREITKMQIMEFLARVFKKDPQAWPSRYREAL----EEARALREANPTA 311
YEF WG RA E +KM+++EF+A++ + SRY EAL E+ARA A +A
Sbjct: 389 RYEFLWGPRARAETSKMKVLEFVAKLNDTVASTYKSRYEEALREEEEQARARAVARDSA 447
>gi|169216191 PREDICTED: melanoma antigen family B, 17 [Homo
sapiens]
Length = 457
Score = 140 bits (352), Expect = 2e-33
Identities = 96/299 (32%), Positives = 156/299 (52%), Gaps = 25/299 (8%)
Query: 36 ATLAEPQSPPLGPTAAPQAAPPPQAPNDEGDPKALQQAAEEGRAHQAPSAA--------Q 87
AT AE + P +++P PPQ+ + G P+ Q+A+ A S Q
Sbjct: 151 ATAAEKEKLP--SSSSPACQSPPQSFPNAGIPQESQRASYPSSPASAVSLTSSDEGAKGQ 208
Query: 88 PGPAP-----PAPAQ------LVQKAHELMWYVLVKDQKKMIIWFPDMVKDVIGSYKKWC 136
G +P P+ ++ L K EL+ ++L K +K I M+K + YK+
Sbjct: 209 KGESPNSFHGPSSSESTGRDLLNTKTGELVQFLLNKYIRKEPITREAMLKVINRKYKQHF 268
Query: 137 RSILRRTSLILARVFGLHLRLTSLHTMEFALVKALEPEELDRVALSNRMPMTGLLLMILS 196
ILRR++ + VFGL+L+ + LV L+ ++ P++GLL+++LS
Sbjct: 269 PEILRRSTENVEVVFGLYLKEMDPSRQSYVLVGKLDFPNQGSLSDGGGFPLSGLLMVLLS 328
Query: 197 LIYVKGRGARESAVWNVLRILGLRPWKKHSTFGDVRKLITEEFVQMNYLKYQRVPYVEPP 256
I++ G A E +W L LG+ +KH +G+ ++L+T++ V+ YL+YQ+VP +PP
Sbjct: 329 TIFMHGNRATEEEMWECLNALGMYKGRKHFIYGEPQELVTKDLVREGYLEYQQVPSSDPP 388
Query: 257 EYEFFWGSRASREITKMQIMEFLARVFKKDPQAWPSRYREAL----EEARALREANPTA 311
YEF WG RA E +KM+++EF+A++ + SRY EAL E+ARA A +A
Sbjct: 389 RYEFLWGPRARAETSKMKVLEFVAKLNDTVASTYKSRYEEALREEEEQARARAVARDSA 447
>gi|169216802 PREDICTED: melanoma antigen family B, 17 [Homo
sapiens]
Length = 457
Score = 140 bits (352), Expect = 2e-33
Identities = 96/299 (32%), Positives = 156/299 (52%), Gaps = 25/299 (8%)
Query: 36 ATLAEPQSPPLGPTAAPQAAPPPQAPNDEGDPKALQQAAEEGRAHQAPSAA--------Q 87
AT AE + P +++P PPQ+ + G P+ Q+A+ A S Q
Sbjct: 151 ATAAEKEKLP--SSSSPACQSPPQSFPNAGIPQESQRASYPSSPASAVSLTSSDEGAKGQ 208
Query: 88 PGPAP-----PAPAQ------LVQKAHELMWYVLVKDQKKMIIWFPDMVKDVIGSYKKWC 136
G +P P+ ++ L K EL+ ++L K +K I M+K + YK+
Sbjct: 209 KGESPNSFHGPSSSESTGRDLLNTKTGELVQFLLNKYIRKEPITREAMLKVINRKYKQHF 268
Query: 137 RSILRRTSLILARVFGLHLRLTSLHTMEFALVKALEPEELDRVALSNRMPMTGLLLMILS 196
ILRR++ + VFGL+L+ + LV L+ ++ P++GLL+++LS
Sbjct: 269 PEILRRSTENVEVVFGLYLKEMDPSRQSYVLVGKLDFPNQGSLSDGGGFPLSGLLMVLLS 328
Query: 197 LIYVKGRGARESAVWNVLRILGLRPWKKHSTFGDVRKLITEEFVQMNYLKYQRVPYVEPP 256
I++ G A E +W L LG+ +KH +G+ ++L+T++ V+ YL+YQ+VP +PP
Sbjct: 329 TIFMHGNRATEEEMWECLNALGMYKGRKHFIYGEPQELVTKDLVREGYLEYQQVPSSDPP 388
Query: 257 EYEFFWGSRASREITKMQIMEFLARVFKKDPQAWPSRYREAL----EEARALREANPTA 311
YEF WG RA E +KM+++EF+A++ + SRY EAL E+ARA A +A
Sbjct: 389 RYEFLWGPRARAETSKMKVLEFVAKLNDTVASTYKSRYEEALREEEEQARARAVARDSA 447
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.132 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,069,771
Number of Sequences: 37866
Number of extensions: 763720
Number of successful extensions: 13607
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 360
Number of HSP's successfully gapped in prelim test: 805
Number of HSP's that attempted gapping in prelim test: 8066
Number of HSP's gapped (non-prelim): 4750
length of query: 321
length of database: 18,247,518
effective HSP length: 102
effective length of query: 219
effective length of database: 14,385,186
effective search space: 3150355734
effective search space used: 3150355734
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.