Search of human proteins with 4505299

Search of human proteins with 4505299

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4505299 myogenic factor 6 [Homo sapiens]
         (242 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4505299 myogenic factor 6 [Homo sapiens]                           490   e-139
gi|18765727 myogenin [Homo sapiens]                                   164   5e-41
gi|156104906 myogenic factor 5 [Homo sapiens]                         146   1e-35
gi|23111009 myogenic differentiation 1 [Homo sapiens]                 130   1e-30
gi|30039710 pancreas specific transcription factor, 1a [Homo sap...    59   5e-09
gi|12545384 basic helix-loop-helix transcription factor HAND2 [H...    51   8e-07
gi|23097242 nephew of atonal 3 [Homo sapiens]                          49   3e-06
gi|90403598 mesoderm posterior 2 homolog [Homo sapiens]                48   7e-06
gi|55743094 achaete-scute complex homolog 1 [Homo sapiens]             47   1e-05
gi|116517330 factor in the germline alpha [Homo sapiens]               47   1e-05
gi|4885665 achaete-scute complex homolog-like 2 [Homo sapiens]         47   1e-05
gi|21553337 atonal homolog 7 [Homo sapiens]                            46   3e-05
gi|17981708 twist homolog 2 [Homo sapiens]                             46   3e-05
gi|4507741 twist [Homo sapiens]                                        45   4e-05
gi|116805332 musculin [Homo sapiens]                                   45   7e-05
gi|206597481 achaete-scute complex-like 4 [Homo sapiens]               43   2e-04
gi|226498192 atonal homolog 8 [Homo sapiens]                           43   3e-04
gi|4885075 atonal homolog 1 [Homo sapiens]                             43   3e-04
gi|48255909 basic helix-loop-helix transcription factor 15 [Homo...    43   3e-04
gi|4507447 transcription factor AP-4 (activating enhancer bindin...    42   4e-04
gi|10190680 ASCL3 [Homo sapiens]                                       42   5e-04
gi|239752994 PREDICTED: achaete-scute complex homolog 5 (Drosoph...    42   6e-04
gi|239747548 PREDICTED: achaete-scute complex homolog 5 (Drosoph...    42   6e-04
gi|239741422 PREDICTED: achaete-scute complex homolog 5 [Homo sa...    42   6e-04
gi|4507363 T-cell acute lymphocytic leukemia 1 [Homo sapiens]          42   6e-04
gi|161484632 nescient helix loop helix 2 [Homo sapiens]                41   8e-04
gi|5031945 nescient helix loop helix 2 [Homo sapiens]                  41   8e-04
gi|5031943 nescient helix loop helix 1 [Homo sapiens]                  41   0.001
gi|38202237 transcription factor 21 [Homo sapiens]                     40   0.001
gi|38202239 transcription factor 21 [Homo sapiens]                     40   0.001

>gi|4505299 myogenic factor 6 [Homo sapiens]
          Length = 242

 Score =  490 bits (1262), Expect = e-139
 Identities = 242/242 (100%), Positives = 242/242 (100%)

Query: 1   MMMDLFETGSYFFYLDGENVTLQPLEVAEGSPLYPGSDGTLSPCQDQMPPEAGSDSSGEE 60
           MMMDLFETGSYFFYLDGENVTLQPLEVAEGSPLYPGSDGTLSPCQDQMPPEAGSDSSGEE
Sbjct: 1   MMMDLFETGSYFFYLDGENVTLQPLEVAEGSPLYPGSDGTLSPCQDQMPPEAGSDSSGEE 60

Query: 61  HVLAPPGLQPPHCPGQCLIWACKTCKRKSAPTDRRKAATLRERRRLKKINEAFEALKRRT 120
           HVLAPPGLQPPHCPGQCLIWACKTCKRKSAPTDRRKAATLRERRRLKKINEAFEALKRRT
Sbjct: 61  HVLAPPGLQPPHCPGQCLIWACKTCKRKSAPTDRRKAATLRERRRLKKINEAFEALKRRT 120

Query: 121 VANPNQRLPKVEILRSAISYIERLQDLLHRLDQQEKMQELGVDPFSYRPKQENLEGADFL 180
           VANPNQRLPKVEILRSAISYIERLQDLLHRLDQQEKMQELGVDPFSYRPKQENLEGADFL
Sbjct: 121 VANPNQRLPKVEILRSAISYIERLQDLLHRLDQQEKMQELGVDPFSYRPKQENLEGADFL 180

Query: 181 RTCSSQWPSVSDHSRGLVITAKEGGASIDSSASSSLRCLSSIVDSISSEERKLPCVEEVV 240
           RTCSSQWPSVSDHSRGLVITAKEGGASIDSSASSSLRCLSSIVDSISSEERKLPCVEEVV
Sbjct: 181 RTCSSQWPSVSDHSRGLVITAKEGGASIDSSASSSLRCLSSIVDSISSEERKLPCVEEVV 240

Query: 241 EK 242
           EK
Sbjct: 241 EK 242


>gi|18765727 myogenin [Homo sapiens]
          Length = 224

 Score =  164 bits (416), Expect = 5e-41
 Identities = 112/247 (45%), Positives = 143/247 (57%), Gaps = 34/247 (13%)

Query: 3   MDLFETGSYFF----YLDGENVTLQPLEVAEGSPLYPGSDGTLSPCQDQMPPEAGSDSSG 58
           M+L+ET  YF+    + DGEN     L+  E  P Y  ++ TLSP           ++ G
Sbjct: 1   MELYETSPYFYQEPRFYDGENYLPVHLQGFE-PPGYERTELTLSP-----------EAPG 48

Query: 59  EEHVLAPPGL-QPPHCPGQCLIWACKTCKRKSAPTDRRKAATLRERRRLKKINEAFEALK 117
               L   GL  P HCPGQCL WACK CKRKS   DRR+AATLRE+RRLKK+NEAFEALK
Sbjct: 49  P---LEDKGLGTPEHCPGQCLPWACKVCKRKSVSVDRRRAATLREKRRLKKVNEAFEALK 105

Query: 118 RRTVANPNQRLPKVEILRSAISYIERLQDLLHRLDQQEK--MQELGVDPFSYRPKQENLE 175
           R T+ NPNQRLPKVEILRSAI YIERLQ LL  L+Q+E+      G  P    P + +  
Sbjct: 106 RSTLLNPNQRLPKVEILRSAIQYIERLQALLSSLNQEERDLRYRGGGGPQPGVPSECSSH 165

Query: 176 GADFLRTCSSQWPSVSDHSRGLVITAKEGG--ASIDSSASSSLRCLSSIVDSISSEERKL 233
            A    +CS +W S       L  +A  G    + D + + +L  L+SIVDSI+ E+  +
Sbjct: 166 SA----SCSPEWGS------ALEFSANPGDHLLTADPTDAHNLHSLTSIVDSITVEDVSV 215

Query: 234 PCVEEVV 240
              +E +
Sbjct: 216 AFPDETM 222


>gi|156104906 myogenic factor 5 [Homo sapiens]
          Length = 255

 Score =  146 bits (369), Expect = 1e-35
 Identities = 90/180 (50%), Positives = 108/180 (60%), Gaps = 9/180 (5%)

Query: 53  GSDSSGEEHVLAPPGLQPPHCPGQCLIWACKTCKRKSAPTDRRKAATLRERRRLKKINEA 112
           GSD   +EHV AP G    H  G CL+WACK CKRKS   DRRKAAT+RERRRLKK+N+A
Sbjct: 48  GSDE--DEHVRAPTG---HHQAGHCLMWACKACKRKSTTMDRRKAATMRERRRLKKVNQA 102

Query: 113 FEALKRRTVANPNQRLPKVEILRSAISYIERLQDLLHRLDQQEKMQELGVDPFSYRPKQE 172
           FE LKR T  NPNQRLPKVEILR+AI YIE LQ+LL   +Q E    L     S  P   
Sbjct: 103 FETLKRCTTTNPNQRLPKVEILRNAIRYIESLQELLR--EQVENYYSLPGQSCS-EPTSP 159

Query: 173 NLEGADFLRTCSSQ-WPSVSDHSRGLVITAKEGGASIDSSASSSLRCLSSIVDSISSEER 231
               +D +  C+S  W   S     +         + D ++ SSL CLS+IVD I+S E+
Sbjct: 160 TSNCSDGMPECNSPVWSRKSSTFDSIYCPDVSNVYATDKNSLSSLDCLSNIVDRITSSEQ 219


>gi|23111009 myogenic differentiation 1 [Homo sapiens]
          Length = 320

 Score =  130 bits (327), Expect = 1e-30
 Identities = 85/197 (43%), Positives = 104/197 (52%), Gaps = 24/197 (12%)

Query: 59  EEHVLAPPGLQPPHCPGQCLIWACKTCKRKSAPTDRRKAATLRERRRLKKINEAFEALKR 118
           +EHV AP G    H  G+CL+WACK CKRK+   DRRKAAT+RERRRL K+NEAFE LKR
Sbjct: 78  DEHVRAPSG---HHQAGRCLLWACKACKRKTTNADRRKAATMRERRRLSKVNEAFETLKR 134

Query: 119 RTVANPNQRLPKVEILRSAISYIERLQDLLHRLDQQEKMQELGVDPFSYRPKQENLEGAD 178
            T +NPNQRLPKVEILR+AI YIE LQ LL   DQ           ++  P      G  
Sbjct: 135 CTSSNPNQRLPKVEILRNAIRYIEGLQALLR--DQDAAPPGAAAAFYAPGPLPPGRGGEH 192

Query: 179 FLRTCSSQWPSVSDHSRGLVITAKEGGASI-------------------DSSASSSLRCL 219
           +     +  P  +     +  +    GA                      S+A SSL CL
Sbjct: 193 YSGDSDASSPRSNCSDGMMDYSGPPSGARRRNCYEGAYYNEAPSEPRPGKSAAVSSLDCL 252

Query: 220 SSIVDSISSEERKLPCV 236
           SSIV+ IS+E    P +
Sbjct: 253 SSIVERISTESPAAPAL 269


>gi|30039710 pancreas specific transcription factor, 1a [Homo
           sapiens]
          Length = 328

 Score = 58.5 bits (140), Expect = 5e-09
 Identities = 51/166 (30%), Positives = 69/166 (41%), Gaps = 35/166 (21%)

Query: 12  FFYLDGENVTLQPLEVAEGSPLYPGSDGTLSPCQDQMPPEAGSDSSGEEHVLAPPGLQP- 70
           + Y DG  + LQP   A    L P S G L        P+ G          APPG  P 
Sbjct: 60  YCYRDGACLLLQPAPPAAPLALAPPSSGGLGE------PDDGGGGGYCCETGAPPGGFPY 113

Query: 71  -PHCPGQCLIWAC--------------------------KTCKRKSAPTDRRKAATLRER 103
            P  P  CL + C                          +  + ++     R+AA +RER
Sbjct: 114 SPGSPPSCLAYPCAGAAVLSPGARLRGLSGAAAAAARRRRRVRSEAELQQLRQAANVRER 173

Query: 104 RRLKKINEAFEALKRRTVANP-NQRLPKVEILRSAISYIERLQDLL 148
           RR++ IN+AFE L+      P  +RL KV+ LR AI YI  L +L+
Sbjct: 174 RRMQSINDAFEGLRSHIPTLPYEKRLSKVDTLRLAIGYINFLSELV 219


>gi|12545384 basic helix-loop-helix transcription factor HAND2 [Homo
           sapiens]
          Length = 217

 Score = 51.2 bits (121), Expect = 8e-07
 Identities = 39/108 (36%), Positives = 50/108 (46%), Gaps = 17/108 (15%)

Query: 50  PEAGSDSSGEEHVL---APPGLQPPHCPGQCLIWACKTCKRKSAPTDRRKAATLRERRRL 106
           PE  S ++G +H      PPG  PP   G               P  RR  A  +ERRR 
Sbjct: 66  PEYASGAAGLDHSHYGGVPPGAGPPGLGGP-------------RPVKRRGTANRKERRRT 112

Query: 107 KKINEAFEALKRRTVANP-NQRLPKVEILRSAISYIERLQDLLHRLDQ 153
           + IN AF  L+      P + +L K++ LR A SYI  L DLL + DQ
Sbjct: 113 QSINSAFAELRECIPNVPADTKLSKIKTLRLATSYIAYLMDLLAKDDQ 160


>gi|23097242 nephew of atonal 3 [Homo sapiens]
          Length = 166

 Score = 49.3 bits (116), Expect = 3e-06
 Identities = 29/72 (40%), Positives = 46/72 (63%), Gaps = 2/72 (2%)

Query: 86  KRKSAPT-DRRKAATLRERRRLKKINEAFEALKRRTVANP-NQRLPKVEILRSAISYIER 143
           KRK   T  +R+AA +RER+R+  +NEAF+ L+R+       +RL ++E LR AI YI  
Sbjct: 93  KRKRVITYAQRQAANIRERKRMFNLNEAFDQLRRKVPTFAYEKRLSRIETLRLAIVYISF 152

Query: 144 LQDLLHRLDQQE 155
           + +LL   +++E
Sbjct: 153 MTELLESCEKKE 164


>gi|90403598 mesoderm posterior 2 homolog [Homo sapiens]
          Length = 397

 Score = 48.1 bits (113), Expect = 7e-06
 Identities = 37/111 (33%), Positives = 56/111 (50%), Gaps = 8/111 (7%)

Query: 46  DQMPPEAGSDSSGE---EHVLAPPGLQPPHCPGQCLIWACKTCKR-KSAPTD-RRKAATL 100
           D   P + SDSSG    +     P  QPP C  +    A  T +R ++ P   +R++A+ 
Sbjct: 29  DSTSPASSSDSSGSCPCDGARGLPQPQPPSCSSRAAEAAATTPRRARTGPAGGQRQSASE 88

Query: 101 RERRRLKKINEAFEALKR---RTVANPNQRLPKVEILRSAISYIERLQDLL 148
           RE+ R++ +  A   L+R    ++A   Q L K+E LR AI YI  L  +L
Sbjct: 89  REKLRMRTLARALHELRRFLPPSLAPAGQSLTKIETLRLAIRYIGHLSAVL 139


>gi|55743094 achaete-scute complex homolog 1 [Homo sapiens]
          Length = 236

 Score = 47.4 bits (111), Expect = 1e-05
 Identities = 45/140 (32%), Positives = 59/140 (42%), Gaps = 18/140 (12%)

Query: 47  QMPPEAGSDSSGEEHVLAPPGLQPPHCPGQCLIWACKTCKRK--------SAPTDRRKAA 98
           Q+ P A    SG  H  AP  ++        L+     CKR+        S P  +  A 
Sbjct: 65  QLRPAADGQPSGGGHKSAPKQVKRQRSSSPELM----RCKRRLNFSGFGYSLPQQQPAAV 120

Query: 99  TLR---ERRRLKKINEAFEALKRRTVAN--PNQRLPKVEILRSAISYIERLQDLLHRLDQ 153
             R   ER R+K +N  F  L R  V N   N+++ KVE LRSA+ YI  LQ LL   D 
Sbjct: 121 ARRNERERNRVKLVNLGFATL-REHVPNGAANKKMSKVETLRSAVEYIRALQQLLDEHDA 179

Query: 154 QEKMQELGVDPFSYRPKQEN 173
                + GV   +  P   N
Sbjct: 180 VSAAFQAGVLSPTISPNYSN 199


>gi|116517330 factor in the germline alpha [Homo sapiens]
          Length = 219

 Score = 47.4 bits (111), Expect = 1e-05
 Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 1/65 (1%)

Query: 93  DRRKAATLRERRRLKKINEAFEALKRRTVANPNQRLP-KVEILRSAISYIERLQDLLHRL 151
           +RR+ A  +ER R+K +N  F  LK      P  R P KV+IL+ A  YI+ L DLL   
Sbjct: 65  ERRRVANAKERERIKNLNRGFARLKALVPFLPQSRKPSKVDILKGATEYIQVLSDLLEGA 124

Query: 152 DQQEK 156
              +K
Sbjct: 125 KDSKK 129


>gi|4885665 achaete-scute complex homolog-like 2 [Homo sapiens]
          Length = 193

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 1/70 (1%)

Query: 101 RERRRLKKINEAFEALKRRTV-ANPNQRLPKVEILRSAISYIERLQDLLHRLDQQEKMQE 159
           RER R+K +N  F+AL++       +++L KVE LRSA+ YI  LQ LL   D       
Sbjct: 58  RERNRVKLVNLGFQALRQHVPHGGASKKLSKVETLRSAVEYIRALQRLLAEHDAVRNALA 117

Query: 160 LGVDPFSYRP 169
            G+ P + RP
Sbjct: 118 GGLRPQAVRP 127


>gi|21553337 atonal homolog 7 [Homo sapiens]
          Length = 152

 Score = 46.2 bits (108), Expect = 3e-05
 Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 6/87 (6%)

Query: 63  LAPPGLQPPHCPGQCLIWACKTCKRKSAPTDRRKAATLRERRRLKKINEAFEALKRRTVA 122
           +APP      C G      C    R  +   RR AA  RERRR++ +N AF+ L+R    
Sbjct: 15  VAPPCAGGTECAG-----TCAGAGRLESAARRRLAANARERRRMQGLNTAFDRLRRVVPQ 69

Query: 123 -NPNQRLPKVEILRSAISYIERLQDLL 148
              +++L K E L+ A+SYI  L  +L
Sbjct: 70  WGQDKKLSKYETLQMALSYIMALTRIL 96


>gi|17981708 twist homolog 2 [Homo sapiens]
          Length = 160

 Score = 45.8 bits (107), Expect = 3e-05
 Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 3/87 (3%)

Query: 94  RRKAATLRERRRLKKINEAFEALKRRTVANPNQRLPKVEILRSAISYIERLQDLLHRLDQ 153
           +R  A +RER+R + +NEAF AL++     P+ +L K++ L+ A  YI+ L  +L   + 
Sbjct: 67  QRILANVRERQRTQSLNEAFAALRKIIPTLPSDKLSKIQTLKLAARYIDFLYQVLQSDEM 126

Query: 154 QEKMQE---LGVDPFSYRPKQENLEGA 177
             KM     +  +  SY      +EGA
Sbjct: 127 DNKMTSCSYVAHERLSYAFSVWRMEGA 153


>gi|4507741 twist [Homo sapiens]
          Length = 202

 Score = 45.4 bits (106), Expect = 4e-05
 Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 3/87 (3%)

Query: 94  RRKAATLRERRRLKKINEAFEALKRRTVANPNQRLPKVEILRSAISYIERLQDLLHRLDQ 153
           +R  A +RER+R + +NEAF AL++     P+ +L K++ L+ A  YI+ L  +L   + 
Sbjct: 109 QRVMANVRERQRTQSLNEAFAALRKIIPTLPSDKLSKIQTLKLAARYIDFLYQVLQSDEL 168

Query: 154 QEKMQE---LGVDPFSYRPKQENLEGA 177
             KM     +  +  SY      +EGA
Sbjct: 169 DSKMASCSYVAHERLSYAFSVWRMEGA 195


>gi|116805332 musculin [Homo sapiens]
          Length = 206

 Score = 44.7 bits (104), Expect = 7e-05
 Identities = 44/159 (27%), Positives = 70/159 (44%), Gaps = 25/159 (15%)

Query: 36  GSDGTLSPCQDQMPPEAGSDSSGEEHVLAPPGLQPPHCPGQCLIWACKTCKRKSAPTDRR 95
           G+ G+   C+ + P  AG   +G        G +P    G     +   CK+      +R
Sbjct: 62  GTAGSAEGCKRKRPRVAGGGGAGGS--AGGGGKKPLPAKG-----SAAECKQS-----QR 109

Query: 96  KAATLRERRRLKKINEAFEALKRRTV-ANPNQRLPKVEILRSAISYIERLQDLLHRLDQQ 154
            AA  RER R++ +++AF  LK       P+ +L K++ LR A SYI  L+ LL    Q+
Sbjct: 110 NAANARERARMRVLSKAFSRLKTSLPWVPPDTKLSKLDTLRLASSYIAHLRQLL----QE 165

Query: 155 EKMQELGVDP--------FSYRPKQENLEGADFLRTCSS 185
           ++ +   V P         S RP  +  E +   R C +
Sbjct: 166 DRYENGYVHPVNLTWPFVVSGRPDSDTKEVSAANRLCGT 204


>gi|206597481 achaete-scute complex-like 4 [Homo sapiens]
          Length = 173

 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 1/51 (1%)

Query: 101 RERRRLKKINEAFEALKRRTVAN-PNQRLPKVEILRSAISYIERLQDLLHR 150
           RER+R++ +NE +  L+        ++RL KVE LR+AI YI+ LQ+LL R
Sbjct: 81  RERQRVRCVNEGYARLRDHLPRELADKRLSKVETLRAAIDYIKHLQELLER 131


>gi|226498192 atonal homolog 8 [Homo sapiens]
          Length = 321

 Score = 42.7 bits (99), Expect = 3e-04
 Identities = 43/139 (30%), Positives = 62/139 (44%), Gaps = 15/139 (10%)

Query: 24  PLEVAEGSPLYPGS--DGTLSPCQDQMPPEAGSDSSGEEHVL----APPGLQPPHCPGQC 77
           P   A  +P  P +  + T+ P     P E  S  S   HV+          P   PG+ 
Sbjct: 160 PARPAPSAPPAPPAPPESTVRPAPPTRPGE--SSYSSISHVIYNNHQDSSASPRKRPGEA 217

Query: 78  LIWACKTCKRKSAPTDRRKAATLRERRRLKKINEAFEALKRRTVA-NPNQRLPKVEILRS 136
                 + + K+    RR  A  RER R+  I+ AFEAL+++    +  Q+L K+ ILR 
Sbjct: 218 ---TAASSEIKALQQTRRLLANARERTRVHTISAAFEALRKQVPCYSYGQKLSKLAILRI 274

Query: 137 AISYI---ERLQDLLHRLD 152
           A +YI    RL DL +  D
Sbjct: 275 ACNYILSLARLADLDYSAD 293


>gi|4885075 atonal homolog 1 [Homo sapiens]
          Length = 354

 Score = 42.7 bits (99), Expect = 3e-04
 Identities = 28/74 (37%), Positives = 40/74 (54%), Gaps = 10/74 (13%)

Query: 85  CKRKSAPTD---------RRKAATLRERRRLKKINEAFEALKRRTVA-NPNQRLPKVEIL 134
           C R+ AP+          RR AA  RERRR+  +N AF+ L+    + N +++L K E L
Sbjct: 142 CSRQRAPSSKQVNGVQKQRRLAANARERRRMHGLNHAFDQLRNVIPSFNNDKKLSKYETL 201

Query: 135 RSAISYIERLQDLL 148
           + A  YI  L +LL
Sbjct: 202 QMAQIYINALSELL 215


>gi|48255909 basic helix-loop-helix transcription factor 15 [Homo
           sapiens]
          Length = 199

 Score = 42.7 bits (99), Expect = 3e-04
 Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 1/56 (1%)

Query: 94  RRKAATLRERRRLKKINEAFEALKRRTVANP-NQRLPKVEILRSAISYIERLQDLL 148
           +R+AA  RER R + +N AF AL+      P +++L K+E LR A SYI  L ++L
Sbjct: 73  QRQAANARERDRTQSVNTAFTALRTLIPTEPVDRKLSKIETLRLASSYIAHLANVL 128


>gi|4507447 transcription factor AP-4 (activating enhancer binding
           protein 4) [Homo sapiens]
          Length = 338

 Score = 42.4 bits (98), Expect = 4e-04
 Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 1/86 (1%)

Query: 94  RRKAATLRERRRLKKINEAFEALKRRTVANPNQRLPKVEILRSAISYIERLQDLLHRLDQ 153
           RR+ A   ERRR++ IN  F++LK        ++L K  IL+    YI  L+    RL Q
Sbjct: 49  RREIANSNERRRMQSINAGFQSLKTLIPHTDGEKLSKAAILQQTAEYIFSLEQEKTRLLQ 108

Query: 154 QEKMQELGVDPFS-YRPKQENLEGAD 178
           Q    +  +   S   PK+   E  D
Sbjct: 109 QNTQLKRFIQELSGSSPKRRRAEDKD 134


>gi|10190680 ASCL3 [Homo sapiens]
          Length = 181

 Score = 42.0 bits (97), Expect = 5e-04
 Identities = 27/66 (40%), Positives = 36/66 (54%), Gaps = 2/66 (3%)

Query: 85  CKRKSAPTDRRKAATLRERRRLKKINEAFEALKRRTVANP-NQRLPKVEILRSAISYIER 143
           C+    P   RK    RER+R+K +NE +  L+         +RL KVE LR+AI YI  
Sbjct: 86  CEYSYGPAFTRKRNE-RERQRVKCVNEGYAQLRHHLPEEYLEKRLSKVETLRAAIKYINY 144

Query: 144 LQDLLH 149
           LQ LL+
Sbjct: 145 LQSLLY 150


>gi|239752994 PREDICTED: achaete-scute complex homolog 5
           (Drosophila) [Homo sapiens]
          Length = 313

 Score = 41.6 bits (96), Expect = 6e-04
 Identities = 24/49 (48%), Positives = 33/49 (67%), Gaps = 1/49 (2%)

Query: 101 RERRRLKKINEAFEALKRRTV-ANPNQRLPKVEILRSAISYIERLQDLL 148
           RER+R+K +NE +  L+     A   +RL KVE LR+AI YI+ LQ+LL
Sbjct: 198 RERQRVKCVNEGYARLRGHLPGALAEKRLSKVETLRAAIRYIKYLQELL 246


>gi|239747548 PREDICTED: achaete-scute complex homolog 5
           (Drosophila) [Homo sapiens]
          Length = 313

 Score = 41.6 bits (96), Expect = 6e-04
 Identities = 24/49 (48%), Positives = 33/49 (67%), Gaps = 1/49 (2%)

Query: 101 RERRRLKKINEAFEALKRRTV-ANPNQRLPKVEILRSAISYIERLQDLL 148
           RER+R+K +NE +  L+     A   +RL KVE LR+AI YI+ LQ+LL
Sbjct: 198 RERQRVKCVNEGYARLRGHLPGALAEKRLSKVETLRAAIRYIKYLQELL 246


>gi|239741422 PREDICTED: achaete-scute complex homolog 5 [Homo
           sapiens]
          Length = 313

 Score = 41.6 bits (96), Expect = 6e-04
 Identities = 24/49 (48%), Positives = 33/49 (67%), Gaps = 1/49 (2%)

Query: 101 RERRRLKKINEAFEALKRRTV-ANPNQRLPKVEILRSAISYIERLQDLL 148
           RER+R+K +NE +  L+     A   +RL KVE LR+AI YI+ LQ+LL
Sbjct: 198 RERQRVKCVNEGYARLRGHLPGALAEKRLSKVETLRAAIRYIKYLQELL 246


>gi|4507363 T-cell acute lymphocytic leukemia 1 [Homo sapiens]
          Length = 331

 Score = 41.6 bits (96), Expect = 6e-04
 Identities = 40/142 (28%), Positives = 61/142 (42%), Gaps = 42/142 (29%)

Query: 63  LAPPGLQPPHCPGQCLIWACKT------------------------CKRKSAPTD----- 93
           L+PP L  P  PG+ L+++                            KR+ +P +     
Sbjct: 121 LSPPALAAPAAPGRALLYSLSQPLASLGSGFFGEPDAFPMFTTNNRVKRRPSPYEMEITD 180

Query: 94  -------RRKAATLRERRRLKKINEAFEALKRRTVANP-NQRLPKVEILRSAISYIERLQ 145
                  RR     RER R + +N AF  L++    +P +++L K EILR A+ YI  L 
Sbjct: 181 GPHTKVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLA 240

Query: 146 DLLHRLDQQE---KMQELGVDP 164
            LL+  DQ+E   +  + G DP
Sbjct: 241 KLLN--DQEEEGTQRAKTGKDP 260


>gi|161484632 nescient helix loop helix 2 [Homo sapiens]
          Length = 135

 Score = 41.2 bits (95), Expect = 8e-04
 Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 1/64 (1%)

Query: 86  KRKSAPTDRRKAATLRERRRLKKINEAFEALKRRT-VANPNQRLPKVEILRSAISYIERL 144
           +R+ A    R A   RER R++  N AF  L++      P+++L K+EILR AI YI  L
Sbjct: 70  RRRRATAKYRSAHATRERIRVEAFNLAFAELRKLLPTLPPDKKLSKIEILRLAICYISYL 129

Query: 145 QDLL 148
             +L
Sbjct: 130 NHVL 133


>gi|5031945 nescient helix loop helix 2 [Homo sapiens]
          Length = 135

 Score = 41.2 bits (95), Expect = 8e-04
 Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 1/64 (1%)

Query: 86  KRKSAPTDRRKAATLRERRRLKKINEAFEALKRRT-VANPNQRLPKVEILRSAISYIERL 144
           +R+ A    R A   RER R++  N AF  L++      P+++L K+EILR AI YI  L
Sbjct: 70  RRRRATAKYRSAHATRERIRVEAFNLAFAELRKLLPTLPPDKKLSKIEILRLAICYISYL 129

Query: 145 QDLL 148
             +L
Sbjct: 130 NHVL 133


>gi|5031943 nescient helix loop helix 1 [Homo sapiens]
          Length = 133

 Score = 40.8 bits (94), Expect = 0.001
 Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 1/64 (1%)

Query: 86  KRKSAPTDRRKAATLRERRRLKKINEAFEALKRRT-VANPNQRLPKVEILRSAISYIERL 144
           +R+ A    R A   RER R++  N AF  L++      P+++L K+EILR AI YI  L
Sbjct: 68  RRRRATAKYRTAHATRERIRVEAFNLAFAELRKLLPTLPPDKKLSKIEILRLAICYISYL 127

Query: 145 QDLL 148
             +L
Sbjct: 128 NHVL 131


>gi|38202237 transcription factor 21 [Homo sapiens]
          Length = 179

 Score = 40.4 bits (93), Expect = 0.001
 Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 15/78 (19%)

Query: 86  KRKSAPTDR--------------RKAATLRERRRLKKINEAFEALKRRTV-ANPNQRLPK 130
           KR+ APT +              R AA  RER R++ +++AF  LK       P+ +L K
Sbjct: 58  KRRKAPTKKSPLSGVSQEGKQVQRNAANARERARMRVLSKAFSRLKTTLPWVPPDTKLSK 117

Query: 131 VEILRSAISYIERLQDLL 148
           ++ LR A SYI  L+ +L
Sbjct: 118 LDTLRLASSYIAHLRQIL 135


>gi|38202239 transcription factor 21 [Homo sapiens]
          Length = 179

 Score = 40.4 bits (93), Expect = 0.001
 Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 15/78 (19%)

Query: 86  KRKSAPTDR--------------RKAATLRERRRLKKINEAFEALKRRTV-ANPNQRLPK 130
           KR+ APT +              R AA  RER R++ +++AF  LK       P+ +L K
Sbjct: 58  KRRKAPTKKSPLSGVSQEGKQVQRNAANARERARMRVLSKAFSRLKTTLPWVPPDTKLSK 117

Query: 131 VEILRSAISYIERLQDLL 148
           ++ LR A SYI  L+ +L
Sbjct: 118 LDTLRLASSYIAHLRQIL 135


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.131    0.388 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,369,542
Number of Sequences: 37866
Number of extensions: 522899
Number of successful extensions: 2047
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 80
Number of HSP's that attempted gapping in prelim test: 1942
Number of HSP's gapped (non-prelim): 171
length of query: 242
length of database: 18,247,518
effective HSP length: 99
effective length of query: 143
effective length of database: 14,498,784
effective search space: 2073326112
effective search space used: 2073326112
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.