Guide to the Human Genome
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Name: OR56A5 Sequence: fasta or formatted (313aa) NCBI GI: 225637544
Description:

olfactory receptor, family 56, subfamily A, member 5

Referenced in:

Olfactory Receptors

Other entries for this name:
alt mRNA [313aa] PREDICTED: olfactory receptor, family 56, subfamily A, member 5
alt mRNA [313aa] PREDICTED: olfactory receptor, family 56, subfamily A, member 5
alt mRNA [313aa] PREDICTED: olfactory receptor, family 56, subfamily A, member 5
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         17           2
 C cysteine            3.2         10           1
 D aspartate           2.9          9           2
 E glutamate           1.6          5           1
 F phenylalanine       6.7         21           2
 G glycine             3.5         11           1
 H histidine           1.9          6           2
 I isoleucine         10.9         34           2
 K lysine              3.2         10           1
 L leucine            17.6         55           2
 M methionine          2.6          8           1
 N asparagine          3.8         12           2
 P proline             5.1         16           2
 Q glutamine           3.2         10           1
 R arginine            3.8         12           2
 S serine              8.0         25           2
 T threonine           5.8         18           2
 V valine              6.4         20           2
 W tryptophan          1.3          4           1
 Y tyrosine            3.2         10           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 56, subfamily A, member ... 
OR56A5                1.000   PREDICTED: olfactory receptor, family 56, subfamily...
OR56A5                1.000   PREDICTED: olfactory receptor, family 56, subfamily ...
OR56A5                1.000   PREDICTED: olfactory receptor, family 56, subfamily...
OR56A4                0.886   olfactory receptor, family 56, subfamily A, member 4...
OR56A1                0.807   olfactory receptor, family 56, subfamily A, member 1...
OR56A3                0.747   olfactory receptor, family 56, subfamily A, member ...
OR56B4                0.507   olfactory receptor, family 56, subfamily B, member 4...
OR56B1                0.487   olfactory receptor, family 56, subfamily B, member 1...
OR52K1                0.372   olfactory receptor, family 52, subfamily K, member 1...
OR52K2                0.369   olfactory receptor, family 52, subfamily K, member 2...
OR51E1                0.359   olfactory receptor, family 51, subfamily E, member ...
OR52B2                0.357   olfactory receptor, family 52, subfamily B, member 2...
OR51M1                0.351   olfactory receptor, family 51, subfamily M, member 1...
OR52J3                0.351   olfactory receptor, family 52, subfamily J, member ...
OR51G1                0.351   olfactory receptor, family 51, subfamily G, member 1...
OR52N4                0.349   olfactory receptor, family 52, subfamily N, member ...
OR52E4                0.349   olfactory receptor, family 52, subfamily E, member 4...
OR51G2                0.342   olfactory receptor, family 51, subfamily G, member 2...
OR52N2                0.339   olfactory receptor, family 52, subfamily N, member 2...
OR51L1                0.336   olfactory receptor, family 51, subfamily L, member 1...
OR52L1                0.334   olfactory receptor, family 52, subfamily L, member ...
OR52E2                0.334   olfactory receptor, family 52, subfamily E, member 2...
OR51I2                0.331   olfactory receptor, family 51, subfamily I, member 2...
OR51B6                0.331   olfactory receptor, family 51, subfamily B, member 6...
OR52D1                0.326   olfactory receptor, family 52, subfamily D, member 1...
OR51E2                0.326   olfactory receptor, family 51, subfamily E, member 2...
OR52N1                0.324   olfactory receptor, family 52, subfamily N, member 1...
OR52M1                0.324   olfactory receptor, family 52, subfamily M, member 1...
OR52E8                0.322   olfactory receptor, family 52, subfamily E, member 8...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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