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Search of human proteins with 13027816
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|13027816 growth hormone 1 isoform 3 [Homo sapiens]
(177 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|13027816 growth hormone 1 isoform 3 [Homo sapiens] 357 2e-99
gi|13027814 growth hormone 1 isoform 2 [Homo sapiens] 343 3e-95
gi|13027812 growth hormone 1 isoform 1 [Homo sapiens] 338 2e-93
gi|13027822 growth hormone 2 isoform 4 [Homo sapiens] 315 1e-86
gi|4503991 growth hormone 2 isoform 1 [Homo sapiens] 309 7e-85
gi|10334861 chorionic somatomammotropin hormone 2 isoform 1 [Hom... 290 6e-79
gi|4503083 chorionic somatomammotropin hormone 1 isoform 1 [Homo... 289 8e-79
gi|12545381 chorionic somatomammotropin hormone-like 1 isoform 2... 275 1e-74
gi|12545376 chorionic somatomammotropin hormone-like 1 isoform 1... 266 5e-72
gi|12545378 chorionic somatomammotropin hormone-like 1 isoform 4... 202 9e-53
gi|38201628 chorionic somatomammotropin hormone-like 1 isoform 3... 202 9e-53
gi|13027824 growth hormone 2 isoform 2 [Homo sapiens] 183 6e-47
gi|13027826 growth hormone 2 isoform 3 [Homo sapiens] 182 2e-46
gi|239756908 PREDICTED: similar to chorionic somatomammotropin h... 175 2e-44
gi|12408694 chorionic somatomammotropin hormone 2 isoform 3 [Hom... 168 3e-42
gi|12408687 chorionic somatomammotropin hormone 1 isoform 3 [Hom... 167 3e-42
gi|12408692 chorionic somatomammotropin hormone 2 isoform 2 [Hom... 164 3e-41
gi|12408685 chorionic somatomammotropin hormone 1 isoform 2 [Hom... 164 4e-41
gi|13027818 growth hormone 1 isoform 4 [Homo sapiens] 139 1e-33
gi|4506105 prolactin precursor [Homo sapiens] 46 2e-05
gi|126032338 ryanodine receptor 3 [Homo sapiens] 33 0.099
gi|112799847 cardiac muscle ryanodine receptor [Homo sapiens] 33 0.13
gi|113204617 skeletal muscle ryanodine receptor isoform 2 [Homo ... 33 0.17
gi|113204615 skeletal muscle ryanodine receptor isoform 1 [Homo ... 33 0.17
gi|21536378 ATP-binding cassette, sub-family B (MDR/TAP), member... 29 2.4
gi|91208426 U5 snRNP-specific protein [Homo sapiens] 28 3.2
gi|197927265 RNA (guanine-9-) methyltransferase domain containin... 28 5.4
gi|197927261 RNA (guanine-9-) methyltransferase domain containin... 28 5.4
gi|22748659 RNA (guanine-9-) methyltransferase domain containing... 28 5.4
gi|39930471 hypothetical protein LOC84190 [Homo sapiens] 27 7.1
>gi|13027816 growth hormone 1 isoform 3 [Homo sapiens]
Length = 177
Score = 357 bits (917), Expect = 2e-99
Identities = 177/177 (100%), Positives = 177/177 (100%)
Query: 1 MATGSRTSLLLAFGLLCLPWLQEGSAFPTIPLSRLFDNAMLRAHRLHQLAFDTYQEFNLE 60
MATGSRTSLLLAFGLLCLPWLQEGSAFPTIPLSRLFDNAMLRAHRLHQLAFDTYQEFNLE
Sbjct: 1 MATGSRTSLLLAFGLLCLPWLQEGSAFPTIPLSRLFDNAMLRAHRLHQLAFDTYQEFNLE 60
Query: 61 LLRISLLLIQSWLEPVQFLRSVFANSLVYGASDSNVYDLLKDLEEGIQTLMGRLEDGSPR 120
LLRISLLLIQSWLEPVQFLRSVFANSLVYGASDSNVYDLLKDLEEGIQTLMGRLEDGSPR
Sbjct: 61 LLRISLLLIQSWLEPVQFLRSVFANSLVYGASDSNVYDLLKDLEEGIQTLMGRLEDGSPR 120
Query: 121 TGQIFKQTYSKFDTNSHNDDALLKNYGLLYCFRKDMDKVETFLRIVQCRSVEGSCGF 177
TGQIFKQTYSKFDTNSHNDDALLKNYGLLYCFRKDMDKVETFLRIVQCRSVEGSCGF
Sbjct: 121 TGQIFKQTYSKFDTNSHNDDALLKNYGLLYCFRKDMDKVETFLRIVQCRSVEGSCGF 177
>gi|13027814 growth hormone 1 isoform 2 [Homo sapiens]
Length = 202
Score = 343 bits (881), Expect = 3e-95
Identities = 177/202 (87%), Positives = 177/202 (87%), Gaps = 25/202 (12%)
Query: 1 MATGSRTSLLLAFGLLCLPWLQEGSAFPTIPLSRLFDNAMLRAHRLHQLAFDTYQEFN-- 58
MATGSRTSLLLAFGLLCLPWLQEGSAFPTIPLSRLFDNAMLRAHRLHQLAFDTYQEFN
Sbjct: 1 MATGSRTSLLLAFGLLCLPWLQEGSAFPTIPLSRLFDNAMLRAHRLHQLAFDTYQEFNPQ 60
Query: 59 -----------------------LELLRISLLLIQSWLEPVQFLRSVFANSLVYGASDSN 95
LELLRISLLLIQSWLEPVQFLRSVFANSLVYGASDSN
Sbjct: 61 TSLCFSESIPTPSNREETQQKSNLELLRISLLLIQSWLEPVQFLRSVFANSLVYGASDSN 120
Query: 96 VYDLLKDLEEGIQTLMGRLEDGSPRTGQIFKQTYSKFDTNSHNDDALLKNYGLLYCFRKD 155
VYDLLKDLEEGIQTLMGRLEDGSPRTGQIFKQTYSKFDTNSHNDDALLKNYGLLYCFRKD
Sbjct: 121 VYDLLKDLEEGIQTLMGRLEDGSPRTGQIFKQTYSKFDTNSHNDDALLKNYGLLYCFRKD 180
Query: 156 MDKVETFLRIVQCRSVEGSCGF 177
MDKVETFLRIVQCRSVEGSCGF
Sbjct: 181 MDKVETFLRIVQCRSVEGSCGF 202
>gi|13027812 growth hormone 1 isoform 1 [Homo sapiens]
Length = 217
Score = 338 bits (866), Expect = 2e-93
Identities = 177/217 (81%), Positives = 177/217 (81%), Gaps = 40/217 (18%)
Query: 1 MATGSRTSLLLAFGLLCLPWLQEGSAFPTIPLSRLFDNAMLRAHRLHQLAFDTYQEF--- 57
MATGSRTSLLLAFGLLCLPWLQEGSAFPTIPLSRLFDNAMLRAHRLHQLAFDTYQEF
Sbjct: 1 MATGSRTSLLLAFGLLCLPWLQEGSAFPTIPLSRLFDNAMLRAHRLHQLAFDTYQEFEEA 60
Query: 58 -------------------------------------NLELLRISLLLIQSWLEPVQFLR 80
NLELLRISLLLIQSWLEPVQFLR
Sbjct: 61 YIPKEQKYSFLQNPQTSLCFSESIPTPSNREETQQKSNLELLRISLLLIQSWLEPVQFLR 120
Query: 81 SVFANSLVYGASDSNVYDLLKDLEEGIQTLMGRLEDGSPRTGQIFKQTYSKFDTNSHNDD 140
SVFANSLVYGASDSNVYDLLKDLEEGIQTLMGRLEDGSPRTGQIFKQTYSKFDTNSHNDD
Sbjct: 121 SVFANSLVYGASDSNVYDLLKDLEEGIQTLMGRLEDGSPRTGQIFKQTYSKFDTNSHNDD 180
Query: 141 ALLKNYGLLYCFRKDMDKVETFLRIVQCRSVEGSCGF 177
ALLKNYGLLYCFRKDMDKVETFLRIVQCRSVEGSCGF
Sbjct: 181 ALLKNYGLLYCFRKDMDKVETFLRIVQCRSVEGSCGF 217
>gi|13027822 growth hormone 2 isoform 4 [Homo sapiens]
Length = 202
Score = 315 bits (807), Expect = 1e-86
Identities = 165/202 (81%), Positives = 168/202 (83%), Gaps = 25/202 (12%)
Query: 1 MATGSRTSLLLAFGLLCLPWLQEGSAFPTIPLSRLFDNAMLRAHRLHQLAFDTYQEFN-- 58
MA GSRTSLLLAFGLLCL WLQEGSAFPTIPLSRLFDNAMLRA RL+QLA+DTYQEFN
Sbjct: 1 MAAGSRTSLLLAFGLLCLSWLQEGSAFPTIPLSRLFDNAMLRARRLYQLAYDTYQEFNPQ 60
Query: 59 -----------------------LELLRISLLLIQSWLEPVQFLRSVFANSLVYGASDSN 95
LELLRISLLLIQSWLEPVQ LRSVFANSLVYGASDSN
Sbjct: 61 TSLCFSESIPTPSNRVKTQQKSNLELLRISLLLIQSWLEPVQLLRSVFANSLVYGASDSN 120
Query: 96 VYDLLKDLEEGIQTLMGRLEDGSPRTGQIFKQTYSKFDTNSHNDDALLKNYGLLYCFRKD 155
VY LKDLEEGIQTLM RLEDGSPRTGQIF Q+YSKFDT SHNDDALLKNYGLLYCFRKD
Sbjct: 121 VYRHLKDLEEGIQTLMWRLEDGSPRTGQIFNQSYSKFDTKSHNDDALLKNYGLLYCFRKD 180
Query: 156 MDKVETFLRIVQCRSVEGSCGF 177
MDKVETFLRIVQCRSVEGSCGF
Sbjct: 181 MDKVETFLRIVQCRSVEGSCGF 202
>gi|4503991 growth hormone 2 isoform 1 [Homo sapiens]
Length = 217
Score = 309 bits (792), Expect = 7e-85
Identities = 165/217 (76%), Positives = 168/217 (77%), Gaps = 40/217 (18%)
Query: 1 MATGSRTSLLLAFGLLCLPWLQEGSAFPTIPLSRLFDNAMLRAHRLHQLAFDTYQEF--- 57
MA GSRTSLLLAFGLLCL WLQEGSAFPTIPLSRLFDNAMLRA RL+QLA+DTYQEF
Sbjct: 1 MAAGSRTSLLLAFGLLCLSWLQEGSAFPTIPLSRLFDNAMLRARRLYQLAYDTYQEFEEA 60
Query: 58 -------------------------------------NLELLRISLLLIQSWLEPVQFLR 80
NLELLRISLLLIQSWLEPVQ LR
Sbjct: 61 YILKEQKYSFLQNPQTSLCFSESIPTPSNRVKTQQKSNLELLRISLLLIQSWLEPVQLLR 120
Query: 81 SVFANSLVYGASDSNVYDLLKDLEEGIQTLMGRLEDGSPRTGQIFKQTYSKFDTNSHNDD 140
SVFANSLVYGASDSNVY LKDLEEGIQTLM RLEDGSPRTGQIF Q+YSKFDT SHNDD
Sbjct: 121 SVFANSLVYGASDSNVYRHLKDLEEGIQTLMWRLEDGSPRTGQIFNQSYSKFDTKSHNDD 180
Query: 141 ALLKNYGLLYCFRKDMDKVETFLRIVQCRSVEGSCGF 177
ALLKNYGLLYCFRKDMDKVETFLRIVQCRSVEGSCGF
Sbjct: 181 ALLKNYGLLYCFRKDMDKVETFLRIVQCRSVEGSCGF 217
>gi|10334861 chorionic somatomammotropin hormone 2 isoform 1 [Homo
sapiens]
Length = 217
Score = 290 bits (741), Expect = 6e-79
Identities = 153/217 (70%), Positives = 162/217 (74%), Gaps = 40/217 (18%)
Query: 1 MATGSRTSLLLAFGLLCLPWLQEGSAFPTIPLSRLFDNAMLRAHRLHQLAFDTYQEF--- 57
MA GSRTSLLLAF LLCLPWLQE A T+PLSRLFD+AML+AHR HQLA DTYQEF
Sbjct: 1 MAAGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFEET 60
Query: 58 -------------------------------------NLELLRISLLLIQSWLEPVQFLR 80
NLELLRISLLLI+SWLEPV+FLR
Sbjct: 61 YIPKDQKYSFLHDSQTSFCFSDSIPTPSNMEETQQKSNLELLRISLLLIESWLEPVRFLR 120
Query: 81 SVFANSLVYGASDSNVYDLLKDLEEGIQTLMGRLEDGSPRTGQIFKQTYSKFDTNSHNDD 140
S+FAN+LVY SDS+ Y LLKDLEEGIQTLMGRLEDGS RTGQI KQTYSKFDTNSHN D
Sbjct: 121 SMFANNLVYDTSDSDDYHLLKDLEEGIQTLMGRLEDGSRRTGQILKQTYSKFDTNSHNHD 180
Query: 141 ALLKNYGLLYCFRKDMDKVETFLRIVQCRSVEGSCGF 177
ALLKNYGLLYCFRKDMDKVETFLR+VQCRSVEGSCGF
Sbjct: 181 ALLKNYGLLYCFRKDMDKVETFLRMVQCRSVEGSCGF 217
>gi|4503083 chorionic somatomammotropin hormone 1 isoform 1 [Homo
sapiens]
Length = 217
Score = 289 bits (740), Expect = 8e-79
Identities = 153/217 (70%), Positives = 162/217 (74%), Gaps = 40/217 (18%)
Query: 1 MATGSRTSLLLAFGLLCLPWLQEGSAFPTIPLSRLFDNAMLRAHRLHQLAFDTYQEF--- 57
MA GSRTSLLLAF LLCLPWLQE A T+PLSRLFD+AML+AHR HQLA DTYQEF
Sbjct: 1 MAPGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFEET 60
Query: 58 -------------------------------------NLELLRISLLLIQSWLEPVQFLR 80
NLELLRISLLLI+SWLEPV+FLR
Sbjct: 61 YIPKDQKYSFLHDSQTSFCFSDSIPTPSNMEETQQKSNLELLRISLLLIESWLEPVRFLR 120
Query: 81 SVFANSLVYGASDSNVYDLLKDLEEGIQTLMGRLEDGSPRTGQIFKQTYSKFDTNSHNDD 140
S+FAN+LVY SDS+ Y LLKDLEEGIQTLMGRLEDGS RTGQI KQTYSKFDTNSHN D
Sbjct: 121 SMFANNLVYDTSDSDDYHLLKDLEEGIQTLMGRLEDGSRRTGQILKQTYSKFDTNSHNHD 180
Query: 141 ALLKNYGLLYCFRKDMDKVETFLRIVQCRSVEGSCGF 177
ALLKNYGLLYCFRKDMDKVETFLR+VQCRSVEGSCGF
Sbjct: 181 ALLKNYGLLYCFRKDMDKVETFLRMVQCRSVEGSCGF 217
>gi|12545381 chorionic somatomammotropin hormone-like 1 isoform 2
precursor [Homo sapiens]
Length = 199
Score = 275 bits (704), Expect = 1e-74
Identities = 145/199 (72%), Positives = 153/199 (76%), Gaps = 22/199 (11%)
Query: 1 MATGSRTSLLLAFGLLCLPWLQEGSAFPTIPLSRLFDNAMLRAHRLHQLAFDTYQEF--- 57
MA GSRTSLLLAF LLCLPWLQE A T+PLSRLF AML+AHR HQLA DTYQEF
Sbjct: 1 MAAGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFKEAMLQAHRAHQLAIDTYQEFISS 60
Query: 58 -------------------NLELLRISLLLIQSWLEPVQFLRSVFANSLVYGASDSNVYD 98
NLELL ISLLLI+S LEPV+FLRS F N+LVY SDS+ Y
Sbjct: 61 WGMDSIPTSSNMEETQQKSNLELLHISLLLIESRLEPVRFLRSTFTNNLVYDTSDSDDYH 120
Query: 99 LLKDLEEGIQTLMGRLEDGSPRTGQIFKQTYSKFDTNSHNDDALLKNYGLLYCFRKDMDK 158
LLKDLEEGIQ LMGRLEDGS TGQ KQTYSKFDTNSHN DALLKNYGLL+CFRKDMDK
Sbjct: 121 LLKDLEEGIQMLMGRLEDGSHLTGQTLKQTYSKFDTNSHNHDALLKNYGLLHCFRKDMDK 180
Query: 159 VETFLRIVQCRSVEGSCGF 177
VETFLR+VQCRSVEGSCGF
Sbjct: 181 VETFLRMVQCRSVEGSCGF 199
>gi|12545376 chorionic somatomammotropin hormone-like 1 isoform 1
precursor [Homo sapiens]
Length = 222
Score = 266 bits (681), Expect = 5e-72
Identities = 145/222 (65%), Positives = 153/222 (68%), Gaps = 45/222 (20%)
Query: 1 MATGSRTSLLLAFGLLCLPWLQEGSAFPTIPLSRLFDNAMLRAHRLHQLAFDTYQEF--- 57
MA GSRTSLLLAF LLCLPWLQE A T+PLSRLF AML+AHR HQLA DTYQEF
Sbjct: 1 MAAGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFKEAMLQAHRAHQLAIDTYQEFISS 60
Query: 58 ------------------------------------------NLELLRISLLLIQSWLEP 75
NLELL ISLLLI+S LEP
Sbjct: 61 WGMEAYITKEQKYSFLHDSQTSFCFSDSIPTSSNMEETQQKSNLELLHISLLLIESRLEP 120
Query: 76 VQFLRSVFANSLVYGASDSNVYDLLKDLEEGIQTLMGRLEDGSPRTGQIFKQTYSKFDTN 135
V+FLRS F N+LVY SDS+ Y LLKDLEEGIQ LMGRLEDGS TGQ KQTYSKFDTN
Sbjct: 121 VRFLRSTFTNNLVYDTSDSDDYHLLKDLEEGIQMLMGRLEDGSHLTGQTLKQTYSKFDTN 180
Query: 136 SHNDDALLKNYGLLYCFRKDMDKVETFLRIVQCRSVEGSCGF 177
SHN DALLKNYGLL+CFRKDMDKVETFLR+VQCRSVEGSCGF
Sbjct: 181 SHNHDALLKNYGLLHCFRKDMDKVETFLRMVQCRSVEGSCGF 222
>gi|12545378 chorionic somatomammotropin hormone-like 1 isoform 4
[Homo sapiens]
Length = 139
Score = 202 bits (515), Expect = 9e-53
Identities = 102/126 (80%), Positives = 110/126 (87%)
Query: 52 DTYQEFNLELLRISLLLIQSWLEPVQFLRSVFANSLVYGASDSNVYDLLKDLEEGIQTLM 111
+T Q+ NLELL ISLLLI+S LEPV+FLRS F N+LVY SDS+ Y LLKDLEEGIQ LM
Sbjct: 14 ETQQKSNLELLHISLLLIESRLEPVRFLRSTFTNNLVYDTSDSDDYHLLKDLEEGIQMLM 73
Query: 112 GRLEDGSPRTGQIFKQTYSKFDTNSHNDDALLKNYGLLYCFRKDMDKVETFLRIVQCRSV 171
GRLEDGS TGQ KQTYSKFDTNSHN DALLKNYGLL+CFRKDMDKVETFLR+VQCRSV
Sbjct: 74 GRLEDGSHLTGQTLKQTYSKFDTNSHNHDALLKNYGLLHCFRKDMDKVETFLRMVQCRSV 133
Query: 172 EGSCGF 177
EGSCGF
Sbjct: 134 EGSCGF 139
>gi|38201628 chorionic somatomammotropin hormone-like 1 isoform 3
[Homo sapiens]
Length = 128
Score = 202 bits (515), Expect = 9e-53
Identities = 102/126 (80%), Positives = 110/126 (87%)
Query: 52 DTYQEFNLELLRISLLLIQSWLEPVQFLRSVFANSLVYGASDSNVYDLLKDLEEGIQTLM 111
+T Q+ NLELL ISLLLI+S LEPV+FLRS F N+LVY SDS+ Y LLKDLEEGIQ LM
Sbjct: 3 ETQQKSNLELLHISLLLIESRLEPVRFLRSTFTNNLVYDTSDSDDYHLLKDLEEGIQMLM 62
Query: 112 GRLEDGSPRTGQIFKQTYSKFDTNSHNDDALLKNYGLLYCFRKDMDKVETFLRIVQCRSV 171
GRLEDGS TGQ KQTYSKFDTNSHN DALLKNYGLL+CFRKDMDKVETFLR+VQCRSV
Sbjct: 63 GRLEDGSHLTGQTLKQTYSKFDTNSHNHDALLKNYGLLHCFRKDMDKVETFLRMVQCRSV 122
Query: 172 EGSCGF 177
EGSCGF
Sbjct: 123 EGSCGF 128
>gi|13027824 growth hormone 2 isoform 2 [Homo sapiens]
Length = 256
Score = 183 bits (465), Expect = 6e-47
Identities = 107/163 (65%), Positives = 110/163 (67%), Gaps = 41/163 (25%)
Query: 1 MATGSRTSLLLAFGLLCLPWLQEGSAFPTIPLSRLFDNAMLRAHRLHQLAFDTYQEF--- 57
MA GSRTSLLLAFGLLCL WLQEGSAFPTIPLSRLFDNAMLRA RL+QLA+DTYQEF
Sbjct: 1 MAAGSRTSLLLAFGLLCLSWLQEGSAFPTIPLSRLFDNAMLRARRLYQLAYDTYQEFEEA 60
Query: 58 -------------------------------------NLELLRISLLLIQSWLEPVQFLR 80
NLELLRISLLLIQSWLEPVQ LR
Sbjct: 61 YILKEQKYSFLQNPQTSLCFSESIPTPSNRVKTQQKSNLELLRISLLLIQSWLEPVQLLR 120
Query: 81 SVFANSLVYGASDSNVYDLLKDLEEGIQTLMG-RLEDGSPRTG 122
SVFANSLVYGASDSNVY LKDLEEGIQTLM R+ G P G
Sbjct: 121 SVFANSLVYGASDSNVYRHLKDLEEGIQTLMWVRVAPGIPNPG 163
>gi|13027826 growth hormone 2 isoform 3 [Homo sapiens]
Length = 245
Score = 182 bits (461), Expect = 2e-46
Identities = 103/152 (67%), Positives = 106/152 (69%), Gaps = 40/152 (26%)
Query: 1 MATGSRTSLLLAFGLLCLPWLQEGSAFPTIPLSRLFDNAMLRAHRLHQLAFDTYQEF--- 57
MA GSRTSLLLAFGLLCL WLQEGSAFPTIPLSRLFDNAMLRA RL+QLA+DTYQEF
Sbjct: 1 MAAGSRTSLLLAFGLLCLSWLQEGSAFPTIPLSRLFDNAMLRARRLYQLAYDTYQEFEEA 60
Query: 58 -------------------------------------NLELLRISLLLIQSWLEPVQFLR 80
NLELLRISLLLIQSWLEPVQ LR
Sbjct: 61 YILKEQKYSFLQNPQTSLCFSESIPTPSNRVKTQQKSNLELLRISLLLIQSWLEPVQLLR 120
Query: 81 SVFANSLVYGASDSNVYDLLKDLEEGIQTLMG 112
SVFANSLVYGASDSNVY LKDLEEGIQTL+G
Sbjct: 121 SVFANSLVYGASDSNVYRHLKDLEEGIQTLIG 152
>gi|239756908 PREDICTED: similar to chorionic somatomammotropin
hormone 2 [Homo sapiens]
Length = 96
Score = 175 bits (443), Expect = 2e-44
Identities = 85/96 (88%), Positives = 89/96 (92%)
Query: 82 VFANSLVYGASDSNVYDLLKDLEEGIQTLMGRLEDGSPRTGQIFKQTYSKFDTNSHNDDA 141
+FAN+LVY SDS+ Y LLKDLEEGIQTLMGRLEDGS RTGQI KQTYSKFDTNSHN DA
Sbjct: 1 MFANNLVYDTSDSDDYHLLKDLEEGIQTLMGRLEDGSRRTGQILKQTYSKFDTNSHNHDA 60
Query: 142 LLKNYGLLYCFRKDMDKVETFLRIVQCRSVEGSCGF 177
LLKNYGLLYCFRKDMDKVETFLR+VQCRSVEGSCGF
Sbjct: 61 LLKNYGLLYCFRKDMDKVETFLRMVQCRSVEGSCGF 96
>gi|12408694 chorionic somatomammotropin hormone 2 isoform 3 [Homo
sapiens]
Length = 122
Score = 168 bits (425), Expect = 3e-42
Identities = 98/177 (55%), Positives = 104/177 (58%), Gaps = 55/177 (31%)
Query: 1 MATGSRTSLLLAFGLLCLPWLQEGSAFPTIPLSRLFDNAMLRAHRLHQLAFDTYQEFNLE 60
MA GSRTSLLLAF LLCLPWLQE A T+PLSRLFD+AM L+
Sbjct: 1 MAAGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAM------------------LQ 42
Query: 61 LLRISLLLIQSWLEPVQFLRSVFANSLVYGASDSNVYDLLKDLEEGIQTLMGRLEDGSPR 120
R L I ++ E RLEDGS R
Sbjct: 43 AHRAHQLAIDTYQE-------------------------------------FRLEDGSRR 65
Query: 121 TGQIFKQTYSKFDTNSHNDDALLKNYGLLYCFRKDMDKVETFLRIVQCRSVEGSCGF 177
TGQI KQTYSKFDTNSHN DALLKNYGLLYCFRKDMDKVETFLR+VQCRSVEGSCGF
Sbjct: 66 TGQILKQTYSKFDTNSHNHDALLKNYGLLYCFRKDMDKVETFLRMVQCRSVEGSCGF 122
>gi|12408687 chorionic somatomammotropin hormone 1 isoform 3 [Homo
sapiens]
Length = 122
Score = 167 bits (424), Expect = 3e-42
Identities = 98/177 (55%), Positives = 104/177 (58%), Gaps = 55/177 (31%)
Query: 1 MATGSRTSLLLAFGLLCLPWLQEGSAFPTIPLSRLFDNAMLRAHRLHQLAFDTYQEFNLE 60
MA GSRTSLLLAF LLCLPWLQE A T+PLSRLFD+AM L+
Sbjct: 1 MAPGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAM------------------LQ 42
Query: 61 LLRISLLLIQSWLEPVQFLRSVFANSLVYGASDSNVYDLLKDLEEGIQTLMGRLEDGSPR 120
R L I ++ E RLEDGS R
Sbjct: 43 AHRAHQLAIDTYQE-------------------------------------FRLEDGSRR 65
Query: 121 TGQIFKQTYSKFDTNSHNDDALLKNYGLLYCFRKDMDKVETFLRIVQCRSVEGSCGF 177
TGQI KQTYSKFDTNSHN DALLKNYGLLYCFRKDMDKVETFLR+VQCRSVEGSCGF
Sbjct: 66 TGQILKQTYSKFDTNSHNHDALLKNYGLLYCFRKDMDKVETFLRMVQCRSVEGSCGF 122
>gi|12408692 chorionic somatomammotropin hormone 2 isoform 2 [Homo
sapiens]
Length = 167
Score = 164 bits (416), Expect = 3e-41
Identities = 92/152 (60%), Positives = 100/152 (65%), Gaps = 40/152 (26%)
Query: 1 MATGSRTSLLLAFGLLCLPWLQEGSAFPTIPLSRLFDNAMLRAHRLHQLAFDTYQEF--- 57
MA GSRTSLLLAF LLCLPWLQE A T+PLSRLFD+AML+AHR HQLA DTYQEF
Sbjct: 1 MAAGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFEET 60
Query: 58 -------------------------------------NLELLRISLLLIQSWLEPVQFLR 80
NLELLRISLLLI+SWLEPV+FLR
Sbjct: 61 YIPKDQKYSFLHDSQTSFCFSDSIPTPSNMEETQQKSNLELLRISLLLIESWLEPVRFLR 120
Query: 81 SVFANSLVYGASDSNVYDLLKDLEEGIQTLMG 112
S+FAN+LVY SDS+ Y LLKDLEEGIQTLMG
Sbjct: 121 SMFANNLVYDTSDSDDYHLLKDLEEGIQTLMG 152
>gi|12408685 chorionic somatomammotropin hormone 1 isoform 2 [Homo
sapiens]
Length = 256
Score = 164 bits (415), Expect = 4e-41
Identities = 92/152 (60%), Positives = 100/152 (65%), Gaps = 40/152 (26%)
Query: 1 MATGSRTSLLLAFGLLCLPWLQEGSAFPTIPLSRLFDNAMLRAHRLHQLAFDTYQEF--- 57
MA GSRTSLLLAF LLCLPWLQE A T+PLSRLFD+AML+AHR HQLA DTYQEF
Sbjct: 1 MAPGSRTSLLLAFALLCLPWLQEAGAVQTVPLSRLFDHAMLQAHRAHQLAIDTYQEFEET 60
Query: 58 -------------------------------------NLELLRISLLLIQSWLEPVQFLR 80
NLELLRISLLLI+SWLEPV+FLR
Sbjct: 61 YIPKDQKYSFLHDSQTSFCFSDSIPTPSNMEETQQKSNLELLRISLLLIESWLEPVRFLR 120
Query: 81 SVFANSLVYGASDSNVYDLLKDLEEGIQTLMG 112
S+FAN+LVY SDS+ Y LLKDLEEGIQTLMG
Sbjct: 121 SMFANNLVYDTSDSDDYHLLKDLEEGIQTLMG 152
>gi|13027818 growth hormone 1 isoform 4 [Homo sapiens]
Length = 122
Score = 139 bits (350), Expect = 1e-33
Identities = 65/65 (100%), Positives = 65/65 (100%)
Query: 113 RLEDGSPRTGQIFKQTYSKFDTNSHNDDALLKNYGLLYCFRKDMDKVETFLRIVQCRSVE 172
RLEDGSPRTGQIFKQTYSKFDTNSHNDDALLKNYGLLYCFRKDMDKVETFLRIVQCRSVE
Sbjct: 58 RLEDGSPRTGQIFKQTYSKFDTNSHNDDALLKNYGLLYCFRKDMDKVETFLRIVQCRSVE 117
Query: 173 GSCGF 177
GSCGF
Sbjct: 118 GSCGF 122
Score = 122 bits (306), Expect = 2e-28
Identities = 59/60 (98%), Positives = 59/60 (98%)
Query: 1 MATGSRTSLLLAFGLLCLPWLQEGSAFPTIPLSRLFDNAMLRAHRLHQLAFDTYQEFNLE 60
MATGSRTSLLLAFGLLCLPWLQEGSAFPTIPLSRLFDNAMLRAHRLHQLAFDTYQEF LE
Sbjct: 1 MATGSRTSLLLAFGLLCLPWLQEGSAFPTIPLSRLFDNAMLRAHRLHQLAFDTYQEFRLE 60
>gi|4506105 prolactin precursor [Homo sapiens]
Length = 227
Score = 45.8 bits (107), Expect = 2e-05
Identities = 44/217 (20%), Positives = 92/217 (42%), Gaps = 47/217 (21%)
Query: 4 GSRTSLLLAFGLLC-----LPWLQEGSAFPTIPLSRLFDNAMLRAHRLHQLAFDTYQEFN 58
GS LL++ LLC LP G+A + L LFD A++ +H +H L+ + + EF+
Sbjct: 10 GSLLLLLVSNLLLCQSVAPLPICPGGAARCQVTLRDLFDRAVVLSHYIHNLSSEMFSEFD 69
Query: 59 L------------------------------------ELLRISLLLIQSWLEPVQFL--- 79
+ L + + +++SW EP+ L
Sbjct: 70 KRYTHGRGFITKAINSCHTSSLATPEDKEQAQQMNQKDFLSLIVSILRSWNEPLYHLVTE 129
Query: 80 -RSVFANSLVYGASDSNVYDLLKDLEEGIQTLMGRLEDGSPRTGQIFKQTYSKFDTNSHN 138
R + + + + K L EG++ ++ ++ + + +I+ +
Sbjct: 130 VRGMQEAPEAILSKAVEIEEQTKRLLEGMELIVSQVHPET-KENEIYPVWSGLPSLQMAD 188
Query: 139 DDALLKNY-GLLYCFRKDMDKVETFLRIVQCRSVEGS 174
+++ L Y LL+C R+D K++ +L++++CR + +
Sbjct: 189 EESRLSAYYNLLHCLRRDSHKIDNYLKLLKCRIIHNN 225
>gi|126032338 ryanodine receptor 3 [Homo sapiens]
Length = 4870
Score = 33.5 bits (75), Expect = 0.099
Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 65 SLLLIQSWLEPVQFLRSVFANSLVYGASDSNVYDLLKDLEEGIQ---TLMGRLEDGSPRT 121
SL + W V FL VFAN + + DS+ +LLK+L + +Q ++ L +G+
Sbjct: 3830 SLAHSRLWDAVVGFLH-VFANMQMKLSQDSSQIELLKELLDLLQDMVVMLLSLLEGNVVN 3888
Query: 122 GQIFKQTYSKFDTNSHNDDALLKNYGLLYCFRKDMDKVETF 162
G I KQ +S N + +LK + ++ KD+ +TF
Sbjct: 3889 GTIGKQMVDTLVESSTNVEMILKFFD-MFLKLKDLTSSDTF 3928
>gi|112799847 cardiac muscle ryanodine receptor [Homo sapiens]
Length = 4967
Score = 33.1 bits (74), Expect = 0.13
Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 5/101 (4%)
Query: 65 SLLLIQSWLEPVQFLRSVFANSLVYGASDSNVYDLLK---DLEEGIQTLMGRLEDGSPRT 121
SL + W V FL VFA+ + + DS+ +LLK DL++ + ++ + +G+
Sbjct: 3934 SLAHSRLWDAVVGFLH-VFAHMQMKLSQDSSQIELLKELMDLQKDMVVMLLSMLEGNVVN 3992
Query: 122 GQIFKQTYSKFDTNSHNDDALLKNYGLLYCFRKDMDKVETF 162
G I KQ +S+N + +LK + ++ KD+ +TF
Sbjct: 3993 GTIGKQMVDMLVESSNNVEMILKFFD-MFLKLKDLTSSDTF 4032
>gi|113204617 skeletal muscle ryanodine receptor isoform 2 [Homo
sapiens]
Length = 5033
Score = 32.7 bits (73), Expect = 0.17
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 65 SLLLIQSWLEPVQFLRSVFANSLVYGASDSNVYDLLK---DLEEGIQTLMGRLEDGSPRT 121
SL + W V FL VFA+ ++ A DS+ +LLK DL++ + ++ L +G+
Sbjct: 3973 SLAHSRLWDAVVGFLH-VFAHMMMKLAQDSSQIELLKELLDLQKDMVVMLLSLLEGNVVN 4031
Query: 122 GQIFKQTYSKFDTNSHNDDALLKNYGLLYCFRKDMDKVETF 162
G I +Q +S N + +LK + ++ KD+ E F
Sbjct: 4032 GMIARQMVDMLVESSSNVEMILKFFD-MFLKLKDIVGSEAF 4071
>gi|113204615 skeletal muscle ryanodine receptor isoform 1 [Homo
sapiens]
Length = 5038
Score = 32.7 bits (73), Expect = 0.17
Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 5/101 (4%)
Query: 65 SLLLIQSWLEPVQFLRSVFANSLVYGASDSNVYDLLK---DLEEGIQTLMGRLEDGSPRT 121
SL + W V FL VFA+ ++ A DS+ +LLK DL++ + ++ L +G+
Sbjct: 3978 SLAHSRLWDAVVGFLH-VFAHMMMKLAQDSSQIELLKELLDLQKDMVVMLLSLLEGNVVN 4036
Query: 122 GQIFKQTYSKFDTNSHNDDALLKNYGLLYCFRKDMDKVETF 162
G I +Q +S N + +LK + ++ KD+ E F
Sbjct: 4037 GMIARQMVDMLVESSSNVEMILKFFD-MFLKLKDIVGSEAF 4076
>gi|21536378 ATP-binding cassette, sub-family B (MDR/TAP), member 11
[Homo sapiens]
Length = 1321
Score = 28.9 bits (63), Expect = 2.4
Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 15/79 (18%)
Query: 55 QEFNLELLRISLLLIQSWLEPVQFLRSVFAN-----------SLVYGASDSNVYDLLKDL 103
+ N++ LR + +++ EPV F ++ N +V A ++N Y+ + DL
Sbjct: 487 RSLNIQWLRDQIGIVEQ--EPVLFSTTIAENIRYGREDATMEDIVQAAKEANAYNFIMDL 544
Query: 104 EEGIQTLMGRLEDGSPRTG 122
+ TL+G E G +G
Sbjct: 545 PQQFDTLVG--EGGGQMSG 561
>gi|91208426 U5 snRNP-specific protein [Homo sapiens]
Length = 2335
Score = 28.5 bits (62), Expect = 3.2
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Query: 82 VFANSLVYGASDSNVY--DLLKDLEEGIQT--LMGRLEDGSPRTGQIF 125
+F+N +++ D+NVY + K E + T + G + +PRTGQ+F
Sbjct: 1771 LFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLF 1818
>gi|197927265 RNA (guanine-9-) methyltransferase domain containing 2
[Homo sapiens]
Length = 339
Score = 27.7 bits (60), Expect = 5.4
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 73 LEPVQFLRSVFANSLVYGASDSNVYDLLKDLEEGIQTLMGRLEDGSPRTGQIFKQ 127
++P + + L+Y SDS ++LK+L+E ++G L D + G +KQ
Sbjct: 169 IKPEHYSELIKKEDLIYLTSDSP--NILKELDESKAYVIGGLVDHNHHKGLTYKQ 221
>gi|197927261 RNA (guanine-9-) methyltransferase domain containing 2
[Homo sapiens]
Length = 339
Score = 27.7 bits (60), Expect = 5.4
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 73 LEPVQFLRSVFANSLVYGASDSNVYDLLKDLEEGIQTLMGRLEDGSPRTGQIFKQ 127
++P + + L+Y SDS ++LK+L+E ++G L D + G +KQ
Sbjct: 169 IKPEHYSELIKKEDLIYLTSDSP--NILKELDESKAYVIGGLVDHNHHKGLTYKQ 221
>gi|22748659 RNA (guanine-9-) methyltransferase domain containing 2
[Homo sapiens]
Length = 339
Score = 27.7 bits (60), Expect = 5.4
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 73 LEPVQFLRSVFANSLVYGASDSNVYDLLKDLEEGIQTLMGRLEDGSPRTGQIFKQ 127
++P + + L+Y SDS ++LK+L+E ++G L D + G +KQ
Sbjct: 169 IKPEHYSELIKKEDLIYLTSDSP--NILKELDESKAYVIGGLVDHNHHKGLTYKQ 221
>gi|39930471 hypothetical protein LOC84190 [Homo sapiens]
Length = 603
Score = 27.3 bits (59), Expect = 7.1
Identities = 12/34 (35%), Positives = 22/34 (64%)
Query: 92 SDSNVYDLLKDLEEGIQTLMGRLEDGSPRTGQIF 125
+DS ++D++KDLE+ + + D +P T +IF
Sbjct: 365 ADSELHDIIKDLEDCLMVGLHTCGDLAPNTLRIF 398
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.139 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,223,875
Number of Sequences: 37866
Number of extensions: 234665
Number of successful extensions: 756
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 719
Number of HSP's gapped (non-prelim): 43
length of query: 177
length of database: 18,247,518
effective HSP length: 95
effective length of query: 82
effective length of database: 14,650,248
effective search space: 1201320336
effective search space used: 1201320336
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.